Projects: pypi: PACE

https://packages.ecosyste.ms/registries/pypi.org/packages/PACE

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Latest release: over 10 years ago
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Science Score: 90/100
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Very Likely Science (90)

Papers Mentioning PACE 13,779

10.1371/journal.pone.0241561
The effect of autophagy and mitochondrial fission on Harderian gland is greater than apoptosis in male hamsters during different photoperiods
Cited by: 2
Author(s): Jinhui Xu, Zhe Wang, Junjie Mou, Xiangyu Zhao, Xiao Geng, Ming Wu, Hang Xue, Lei Chen, Laixiang Xu
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0235276
Protective effect of smoking cessation on subsequent myocardial infarction and ischemic stroke independent of weight gain: A nationwide cohort study
Cited by: 10
Author(s): Jung Hwan Cho, Hye Mi Kwon, Se Eun Park, Jae-Hun Jung, Kyung Do Han, Yong Gyu Park, Yang Hyun Kim, Eun Jung Rhee, Won Young Lee
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0227396
Genome mining of the citrus pathogen Elsinoë fawcettii; prediction and prioritisation of candidate effectors, cell wall degrading enzymes and secondary metabolite gene clusters
Cited by: 8
Author(s): Sarah Jeffress, Kiruba Shankari Arun‐Chinnappa, Benjamin Stodart, Niloofar Vaghefi, Yu Pei Tan, Gavin Ash
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0226278
Effects of treated wastewater on the ecotoxicity of small streams – Unravelling the contribution of chemicals causing effects
Cited by: 22
Author(s): Cornelia Kienle, Etiënne L.M. Vermeirssen, Andrea Schifferli, Heinz Singer, Christian Stamm, Inge Werner
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pone.0229438
Forecasting the prevalence of overweight and obesity in India to 2040
Cited by: 104
Author(s): Shammi Luhar, Ian M. Timæus, R. E. Jones, Solveig A. Cunningham, Shivani A. Patel, Sanjay Kinra, Lynda Clarke, Rein M. G. J. Houben
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0258382
The effect of increasing indoor ventilation on artificially generated aerosol particle counts
Cited by: 1
Author(s): Ashwin Johri
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0243348
Cardiorespiratory fitness in late adolescence and long-term risk of psoriasis and psoriatic arthritis among Swedish men
Cited by: 3
Author(s): Marta Laskowski, Linus Schiöler, Helena Gustafsson, Ann‐Marie Wennberg, Maria Åberg, Kjell Torén
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0256399
Determinants of hypertension among patients with type 2 diabetes mellitus on follow-up at Tikur Anbessa Specialized Hospital, Addis Ababa: A case-control study
Cited by: 7
Author(s): Kehabtimer Shiferaw Kotiso, Nabiha Degemu, Samson Gebremedhin, Melaku Taye, Adane Petros, Fanuel Belayneh, Deneke Wolde, Dejene Hailu
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0250830
Retroactivity induced operating regime transition in an enzymatic futile cycle
Cited by: 1
Author(s): Akshay Parundekar, Ganesh A. Viswanathan
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0238058
Detecting face presentation attacks in mobile devices with a patch-based CNN and a sensor-aware loss function
Cited by: 19
Author(s): Waldir Rodrigues de Almeida, Fernanda A. Andaló, Rafael Padilha, Gabriel Bertocco, William Dias, Ricardo da S. Torres, Jacques Wainer, Anderson Rocha
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0234741
High dropout rate from maternity continuum of care after antenatal care booking and its associated factors among reproductive age women in Ethiopia, Evidence from Demographic and Health Survey 2016
Cited by: 25
Author(s): Atalay Goshu Muluneh, Getahun Molla Kassa, Geta Asrade Alemayehu, Mehari Woldemariam Merid
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0238735
Assessing the impact of professional lactation support frequency, duration and delivery form on exclusive breastfeeding in Lebanese mothers
Cited by: 5
Author(s): Dayane Daou, Hani Tamim, Mona Nabulsi
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0255176
Group contracts and sustainability: Experimental evidence from smallholder seed production
Cited by: 2
Author(s): Prakashan Chellattan Veettil, Y. Yashodha, Judit Johny
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0242900
In silico immune infiltration profiling combined with functional enrichment analysis reveals a potential role for naïve B cells as a trigger for severe immune responses in the lungs of COVID-19 patients
Cited by: 12
Author(s): Yi‐Ying Wu, Sheng-Huei Wang, Ching Hsiang Wu, Li-Chen Yen, Huanling Lai, Ching‐Liang Ho, Yi-Lin Chiu
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0241263
Sociodemographic features and mortality of individuals on haemodialysis treatment who test positive for SARS-CoV-2: A UK Renal Registry data analysis
Cited by: 33
Author(s): Manuela Savino, Anna Casula, Shalini Santhakumaran, David Pitcher, Esther Wong, Winnie Magadi, Katharine Evans, Fran Benoy-Deeney, James M. Griffin, Lucy Plumb, Retha Steenkamp, Dorothea Nitsch, James Mu
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0240276
Adverse drug reactions associated with the use of biological agents
Cited by: 3
Author(s): Jorge Enrique Machado‐Alba, Anyi Liliana Jiménez-Morales, Yulieth Carolina Moran-Yela, Ilsa Yadira Parrado-Fajardo, Luis Fernando Valladales‐Restrepo
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0229103
2'-O-ribose methylation of transfer RNA promotes recovery from oxidative stress in Saccharomyces cerevisiae
Cited by: 11
Author(s): Lauren Endres, Rebecca E. Rose, Frank Doyle, Taylor Rahn, Bethany Lee, Jessica Seaman, William D. McIntyre, Daniele Fabris
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pone.0226252
Steady expression of high oleic acid in peanut bred by marker-assisted backcrossing for fatty acid desaturase mutant alleles and its effect on seed germination along with other seedling traits
Cited by: 29
Author(s): SK Bera, J. H. Kamdar, S. V. Kasundra, S. V. Patel, Mital D. Jasani, Anil Kumar Maurya, P.K. Dash, Ajay B. Chandrashekar, Kirti Rani, N. Manivannan, Pasupuleti Janila, Manish K. Pandey, R.P. Vasanthi, K. L. Dobariya, T. Radhakrishnan, Rajeev K. Varshney
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pone.0251916
DPP-4 inhibitors may improve the mortality of coronavirus disease 2019: A meta-analysis
Cited by: 40
Author(s): Yan Yang, Zhongxiang Cai, Jingjing Zhang
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0231031
Polymorphisms and drug resistance analysis of HIV-1 isolates from patients on first line antiretroviral therapy (ART) in South-eastern Nigeria
Cited by: 7
Author(s): A. O. Udeze, David O. Olaleye, Georgina N. Odaibo
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0241422
Development of an immuno-wall device for the rapid and sensitive detection of EGFR mutations in tumor tissues resected from lung cancer patients
Cited by: 3
Author(s): Naoyuki Yogo, Takashi Hase, Tsuyoshi Kasama, Keine Nishiyama, Naoya Ozawa, Takahiro Hatta, Hirofumi Shibata, Mitsuo Sato, Kazuki Komeda, Nozomi Kawabe, Kohei Matsuoka, Toyofumi F. Chen‐Yoshikawa, Noritada Kaji, Manabu Tokeshi, Yoshinobu Baba, Yoshinori Hasegawa
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0246121
Increased risk of falls and fractures in patients with psychosis and Parkinson disease
Cited by: 6
Author(s): Joan Forns, J. Bradley Layton, Jennifer Bartsch, Mary Ellen Turner, Colleen Dempsey, Mary S. Anthony, Mary E. Ritchey, George Demos
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0241060
Rooting ability of rice seedlings increases with higher soluble sugar content from exposure to light
Cited by: 4
Author(s): Wanlai Zhou, Zhang Qi, Jing Chen, Zhijian Tan, Hongying Wang, Chaoyun Wang, Zhenxie Yi
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0233432
Open access publishers: The new players
Cited by: 20
Author(s): Rosângela Schwarz Rodrigues, Ernest Abadal, Breno Kricheldorf Hermes de Araújo
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0230623
Screening efficiency of the Mood and Feelings Questionnaire (MFQ) and Short Mood and Feelings Questionnaire (SMFQ) in Swedish help seeking outpatients
Cited by: 23
Author(s): Håkan Jarbin, Tord Ivarsson, Markus Andersson, Hanna Bergman, Guðmundur Skarphéðinsson
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0226405
Acute kidney injury in Ugandan children with severe malaria is associated with long-term behavioral problems
Cited by: 17
Author(s): Meredith Hickson, Andrea L. Conroy, Paul Bangirana, Robert O. Opoka, Richard Idro, John M. Ssenkusu, Chandy C. John
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pone.0256537
Barriers to timely disclosure of HIV serostatus: A qualitative study at care and treatment centers in Dar es Salaam, Tanzania
Cited by: 8
Author(s): Neelam Ismail, Nancy Matillya, Riaz Ratansi, Columba Mbekenga
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0229759
Brain function and metabolism in patients with long-term tacrolimus therapy after kidney transplantation in comparison to patients after liver transplantation
Cited by: 11
Author(s): Henning Pflugrad, Patrick Nösel, Xiao‐Qi Ding, Birte Schmitz, Heinrich Lanfermann, Hannelore Barg‐Hock, Jürgen Klempnauer, Mario Schiffer, Karin Weißenborn
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0221027
Spatial clustering of notified tuberculosis in Ethiopia: A nationwide study
Cited by: 18
Author(s): Kefyalew Addis Alene, Archie C. A. Clements
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0239886
Web and phone-based COVID-19 syndromic surveillance in Canada: A cross-sectional study
Cited by: 25
Author(s): Lauren Lapointe‐Shaw, Benjamin Rader, Christina M Astley, Joseph E. Hawkins, Deepit Bhatia, William J. Schatten, Todd C. Lee, Jessica J. Liu, Noah Ivers, Nathan M. Stall, Effie Gournis, Ashleigh R. Tuite, David N. Fisman, Isaac I. Bogoch, John S. Brownstein
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0231647
Understanding ambivalence in help-seeking for suicidal people with comorbid depression and alcohol misuse
Cited by: 9
Author(s): Milena Heinsch, Dara Sampson, Valerie Huens, Tonelle Handley, Tanya L. Hanstock, Keith M. Harris, Frances Kay‐Lambkin
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0248042
Development of a multiplex Loop-Mediated Isothermal Amplification (LAMP) assay for on-site diagnosis of SARS CoV-2
Cited by: 46
Author(s): Woong Sik Jang, Da Hye Lim, Yong‐Keun Jung, Ahran Kim, Minsup Lim, Jeonghun Nam, Richard Yanagihara, Sook Won Ryu, Boo Hee Jung, Nam Hee Ryoo, Chae Seung Lim
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0245763
Fatty acid-binding protein 4 is an independent factor in the pathogenesis of retinal vein occlusion
Cited by: 3
Author(s): Masato Furuhashi, Masato Furuhashi, Yosuke Ida, Hiroshi Ohguro, Megumi Watanabe, Soma Suzuki, Kaku Itoh
Software Mentions: 1
Published: almost 6 years ago
10.3390/cancers10050136
Electron Nuclear Dynamics Simulations of Proton Cancer Therapy Reactions: Water Radiolysis and Proton- and Electron-Induced DNA Damage in Computational Prototypes
Cited by: 12
Author(s): Erico S. Teixeira, Karthik Uppulury, Austin J. Privett, Christopher Stopera, Patrick M. McLaurin, Jorge A. Morales
Software Mentions: 1
Published: over 8 years ago
10.1007/s11897-018-0376-x
Chronic Right Ventricular Pacing in the Heart Failure Population
Cited by: 15
Author(s): Justin Gould, Benjamin Sieniewicz, Bradley Porter, Baldeep S. Sidhu, Christopher Aldo Rinaldi
Software Mentions: 1
Published: almost 9 years ago
10.1016/j.cobeha.2021.03.031
Curiosity in childhood and adolescence — what can we learn from the brain
Cited by: 5
Author(s): Matthias J. Gruber, Yana Fandakova
Software Mentions: 1
Published: over 5 years ago
10.3390/dj7030075
Reaching Vulnerable Populations through Portable and Mobile Dentistry—Current and Future Opportunities
Cited by: 5
Author(s): Shailee Gupta, Muna Hakim, Dishant Patel, Lauren Stow, Katherine Shin, Peggy Timothé, Romesh Nalliah
Software Mentions: 1
Published: over 7 years ago
10.3332/ecancer.2013.349
ecancermedicalscience
Cited by: 7
Author(s): Corina W Ramers-Verhoeven, Gary Geipel, Moira Howie
Software Mentions: 1
Published: almost 10 years ago
10.3332/ecancer.2015.498
PACE Continuous Innovation Indicators—a novel tool to measure progress in cancer treatments
Cited by: 4
Author(s): Silvia Paddock, Lauren Brum, Kathleen Sorrow, Samuel Thomas, Susan H. Spence, Catharina Maulbecker-Armstrong, Clifford Goodman, Michael Peake, Gordon McVie, Gary Geipel, Rose Li
Software Mentions: 1
Published: almost 12 years ago
10.1002/eap.1682
Satellite sensor requirements for monitoring essential biodiversity variables of coastal ecosystems
Cited by: 95
Author(s): Frank E. Müller-Karger, Erin L. Hestir, Christiana Ade, Kevin R. Turpie, Dar A. Roberts, David A. Siegel, Robert J. Miller, D. C. Humm, N. R. Izenberg, M. R. Keller, F. Morgan, Robert Frouin, A.G. Dekker, Royal C. Gardner, James Goodman, Blake A. Schaeffer, Bryan A. Franz, Nima Pahlevan, Antonio Mannino, Javier A. Concha, Steven G. Ackleson, Kyle C. Cavanaugh, Anastasia Romanou, M. Tzortziou, Emmanuel Boss, Ryan Pavlick, A. Freeman, Cécile S. Rousseaux, John Dunne, Matthew C. Long, Eduardo Klein, Galen A. McKinley, Joachim I. Goes, Ricardo M. Letelier, Maria T. Kavanaugh, Mitchell A. Roffer, Astrid Bracher, Kevin R. Arrigo, Heidi M. Dierssen, Xiaodong Zhang, Frank W. Davis, Ben Best, Robert Guralnick, John R. Moisan, Heidi M. Sosik, Raphael M. Kudela, Colleen B. Mouw, Andrew H. Barnard, Sherry L. Palacios, Collin S. Roesler, Evangelia G. Drakou, Ward Appeltans, Walter Jetz
Software Mentions: 1
Published: over 8 years ago
10.1186/1476-069X-9-34
Participatory testing and reporting in an environmental-justice community of Worcester, Massachusetts: a pilot project
Cited by: 20
Author(s): Timothy J. Downs, Laura Ross, Danielle Mucciarone, Maria-Camila Calvache, Octavia Taylor, Robert Goble
Software Mentions: 1
Published: over 16 years ago
10.1007/s00787-017-1038-3
Parent-dependent stressors and the onset of anxiety disorders in children: links with parental psychopathology
Cited by: 9
Author(s): Jennifer L. Allen, Seija Sandberg, Celine Chhoa, Tom Fearn, Ronald M. Rapee
Software Mentions: 1
Published: over 9 years ago
10.1007/s12065-012-0071-x
Embodied artificial evolution
Cited by: 48
Author(s): A. E. Eiben, Serge Kernbach, Evert Haasdijk
Software Mentions: 1
Published: over 14 years ago
10.3389/feart.2019.00145
Atmospheric Correction of Satellite Ocean-Color Imagery During the PACE Era
Cited by: 81
Author(s): Robert Frouin, Bryan A. Franz, Amir Ibrahim, Kirk Knobelspiesse, Ziauddin Ahmad, Brian Cairns, Jacek Chowdhary, Heidi M. Dierssen, Jing Tan, Оleg Dubovik, Xin Huang, Anthony B. Davis, О. В. Калашникова, David R. Thompson, L. A. Remer, Emmanuel Boss, O. Coddington, Pierre-Yves Deschamps, Bo Gao, Lydwine Gross, Otto Hasekamp, Ali Omar, Bruno Pelletier, Didier Ramon, François Steinmetz, Peng-Wang Zhai
Software Mentions: 1
Published: over 7 years ago
10.3389/fmars.2017.00060
Simulating PACE Global Ocean Radiances
Cited by: 24
Author(s): Watson W. Gregg, Cécile S. Rousseaux
Software Mentions: 1
Published: over 9 years ago
10.3389/fmed.2021.675014
Theranostic Terbium Radioisotopes: Challenges in Production for Clinical Application
Cited by: 26
Author(s): Nabanita Naskar, Susanta Lahiri
Software Mentions: 1
Published: over 5 years ago
10.3389/fonc.2019.00130
PACE: A Probabilistic Atlas for Normal Tissue Complication Estimation in Radiation Oncology
Cited by: 21
Author(s): Giuseppe Palma, Serena Monti, Amedeo Buonanno, Roberto Pacelli, Laura Cella
Software Mentions: 1
Published: over 7 years ago
10.3389/fpsyt.2018.00365
From Default Mode Network to the Basal Configuration: Sex Differences in the Resting-State Brain Connectivity as a Function of Age and Their Clinical Correlates
Cited by: 16
Author(s): Sean D. Conrin, Liang Zhan, Zachery D. Morrissey, Mengqi Xing, Angus G. Forbes, Pauline M. Maki, Mohammed R. Milad, Olusola Ajilore, Scott A. Langenecker, Alex D. Leow
Software Mentions: 1
Published: over 8 years ago
10.3389/fpsyt.2019.00838
Borderline Personality Pathology in an At Risk Mental State Sample
Cited by: 5
Author(s): Tobias Paust, Anastasia Theodoridou, Mario Müller, Christine Wyss, Caitriona Obermann, Wulf Rössler, Karsten Heekeren
Software Mentions: 1
Published: about 7 years ago
10.3389/fpsyt.2020.601519
The Locus Coeruleus- Norepinephrine System in Stress and Arousal: Unraveling Historical, Current, and Future Perspectives
Cited by: 56
Author(s): Jennifer A. Ross, Elisabeth J. Van Bockstaele
Software Mentions: 1
Published: almost 6 years ago
10.3389/fpsyg.2017.01404
Different Measures of Structural Similarity Tap Different Aspects of Visual Object Processing
Cited by: 7
Author(s): Christian Gerlach
Software Mentions: 1
Published: about 9 years ago
10.1186/1477-7525-11-116
Quality of life and BMI changes in youth participating in an integrated pediatric obesity treatment program
Cited by: 31
Author(s): Keeley J. Pratt, Suzanne Lazorick, Angela L. Lamson, Andrada E. Ivanescu, David N. Collier
Software Mentions: 1
Published: almost 14 years ago
10.1186/s13012-019-0953-8
Evaluating the implementation of the PACE Steps to Success Programme in long-term care facilities in seven countries according to the RE-AIM framework
Cited by: 26
Author(s): Mariska Oosterveld-Vlug, Bregje D. Onwuteaka-Philipsen, Maud ten Koppel, Hein van Hout, Tinne Smets, Lara Pivodic, Marc Tanghe, Nele Van Den Noortgate, Jo Hockley, Sheila Payne, Danni Collingridge Moore, Violetta Kijowska, Katarzyna Szczerbińska, Marika Kylänen, Suvi Leppäaho, Claudia Mercuri, Paola Rossi, Martina Mercuri, Giovanni Gambassi, Catherine Bassal, Emilie Morgan de Paula, Yvonne Engels, Luc Deliëns, Lieve Van den Block, H. Roeline W. Pasman
Software Mentions: 1
Published: almost 7 years ago
10.1080/01621459.2015.1060241
A Functional Approach to Deconvolve Dynamic Neuroimaging Data
Cited by: 9
Author(s): Ci‐Ren Jiang, John A. D. Aston, Jane-ling Wang
Software Mentions: 1
Published: almost 11 years ago
10.1186/1532-429X-14-S1-W32
3D cardiac navigation with rapid multi shot EPI
Cited by: 0
Author(s): Aaron T. Hess, André J van der Kouwe, Stefan Neubauer, Matthew D Robson
Software Mentions: 1
Published: almost 15 years ago
10.1172/JCI93801
Drug-perturbation-based stratification of blood cancer
Cited by: 109
Author(s): Sascha Dietrich, Małgorzata Oleś, Junyan Lu, Leopold Sellner, Simon Anders, Britta Velten, Bian Wu, Jennifer Hüllein, Michelle da Silva Libério, Tatjana Walther, Lena Wagner, Sophie Rabe, Sonja Ghidelli-Disse, Marcus Bantscheff, Andrzej K. Oleś, Mikołaj Słabicki, Andreas Möck, Christopher C. Oakes, Shihui Wang, Sina Oppermann, Marina Lukas, Vladislav Kim, Martin Sill, Axel Benner, Anna Jauch, Lesley Ann Sutton, Emma Young, Richard Rosenquist, Xi-Yang Liu, Alexander Jethwa, Kwang Seok Lee, Joe Lewis, Kerstin Putzker, Christoph Lutz, Davide Rossi, Andriy Mokhir, Thomas Oellerich, Katja Zirlik, Marco Herling, Florence Nguyen‐Khac, Christoph Plass, Emma Andersson, Satu Mustjoki, Christof von Kalle, Anthony D. Ho, Manfred Hensel, Jan Dürig, Ingo Ringshausen, Marc Zapatka, Wolfgang Huber, Thorsten Zenz
Software Mentions: 1
Published: almost 9 years ago
10.1017/cts.2020.499
Development of an electronic health records datamart to support clinical and population health research
Cited by: 14
Author(s): Jillian H. Hurst, Yaxing Liu, Pamela Maxson, Sallie R. Permar, L. Ebony Boulware, Benjamin A. Goldstein
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008049
The Plasmodium falciparum rhoptry bulb protein RAMA plays an essential role in rhoptry neck morphogenesis and host red blood cell invasion
Cited by: 17
Author(s): Emma S. Sherling, Abigail J. Perrin, Ellen Knuepfer, Mark Russell, Lucy Collinson, Louis H. Miller, Michael J. Blackman
Software Mentions: 1
Published: about 7 years ago
10.1371/journal.ppat.1008117
Development of a new largely scalable in vitro prion propagation method for the production of infectious recombinant prions for high resolution structural studies
Cited by: 19
Author(s): Hasier Eraña, Jorge M. Charco, Michele Angelo Di Bari, Carlos M. Díaz-Domínguez, Rafael López-Moreno, Enríc Vidal, Ezequiel González-Miranda, Miguel A. Pérez‐Castro, Sandra García-Martínez, Susana B. Bravo, Natalia Fernández‐Borges, Mariví Geijó, Claudia D’Agostino, Joseba M. Garrido, Jifeng Bian, Anna König, Boran Uluca-Yazgi, Raimon Sabaté, Vadim Khaychuk, Ilaria Vanni, Glenn C. Telling, Henrike Heise, Romolo Nonno, Jesús R. Requena, Joaquı́n Castilla
Software Mentions: 1
Published: about 7 years ago
10.1371/journal.ppat.1008089
Host nutritional status affects alphavirus virulence, transmission, and evolution
Cited by: 33
Author(s): James Weger-Lucarelli, Lucía Carrau, Laura Levi, Veronica V. Rezelj, Thomas Vallet, Hervé Blanc, Jérémy Boussier, Daniela Megrian, Sheryl Coutermarsh-Ott, Tanya LeRoith, Marco Vignuzzi
Software Mentions: 1
Published: about 7 years ago
10.1371/journal.ppat.1007928
Activation of Shigella flexneri type 3 secretion requires a host-induced conformational change to the translocon pore
Cited by: 21
Author(s): Brian C. Russo, Jeffrey K. Duncan, Alexandra L. Wiscovitch, Austin C. Hachey, Marcia B. Goldberg
Software Mentions: 1
Published: about 7 years ago
10.1371/journal.ppat.1008209
Dynamic organization of Herpesvirus glycoproteins on the viral envelope revealed by super-resolution microscopy
Cited by: 13
Author(s): Frauke Beilstein, Gary H. Cohen, Roselyn J. Eisenberg, Valérie Nicolas, Audrey Esclatine, David Pasdeloup
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.ppat.1008185
KSHV activates unfolded protein response sensors but suppresses downstream transcriptional responses to support lytic replication
Cited by: 36
Author(s): Benjamin P. Johnston, Eric S. Pringle, Craig McCormick
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.ppat.1008199
Dengue virus reduces AGPAT1 expression to alter phospholipids and enhance infection in Aedes aegypti
Cited by: 18
Author(s): Thomas Vial, Wei-Lian Tan, Benjamin Wong Wei Xiang, Dorothée Missé, Eric Deharo, Guillaume Marti, Julien Pompon
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.ppat.1008001
Iron availability and oxygen tension regulate the Yersinia Ysc type III secretion system to enable disseminated infection
Cited by: 10
Author(s): Diana Hooker-Romero, Erin L. Mettert, Leah Schwiesow, David Balderas, Pablo Álvarez, Anadin Kicin, Azuah L. Gonzalez, Gregory V. Plano, Patricia J. Kiley, Victoria Auerbuch
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.ppat.1008249
Cross-talk between microglia and neurons regulates HIV latency
Cited by: 51
Author(s): David Alvarez-Carbonell, Fengchun Ye, Nirmala Ramanath, Yoelvis García-Mesa, Pamela E. Knapp, Kurt F. Hauser, Jonathan Karn
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.ppat.1008239
Resistance to ectromelia virus infection requires cGAS in bone marrow-derived cells which can be bypassed with cGAMP therapy
Cited by: 13
Author(s): Eric B. Wong, Brian Montoya, M C C Ferez, Colby Stotesbury, Luis J. Sigal
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.ppat.1008192
A role of hypoxia-inducible factor 1 alpha in Murine Gammaherpesvirus 68 (MHV68) lytic replication and reactivation from latency
Cited by: 16
Author(s): Darlah M. López-Rodríguez, Varvara Kirillov, Laurie T. Krug, Enrique A. Mesri, Samita Andreansky
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.ppat.1008247
A shear stress micromodel of urinary tract infection by the Escherichia coli producing Dr adhesin
Cited by: 15
Author(s): Beata Zalewska-Piątek, Marcin Olszewski, Tomasz Lipniacki, Sławomir Błoński, Miłosz Wieczór, Piotr Bruździak, Anna Skwarska, B. Nowicki, Stella Nowicki, Rafał Piątek
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.ppat.1008292
MyD88-dependent influx of monocytes and neutrophils impairs lymph node B cell responses to chikungunya virus infection via Irf5, Nos2 and Nox2
Cited by: 15
Author(s): Mary K. McCarthy, Glennys V. Reynoso, Emma S. Winkler, Matthias Mack, Michael S. Diamond, Heather D. Hickman, Thomas E. Morrison
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.ppat.1008170
Hepatocyte-derived IL-10 plays a crucial role in attenuating pathogenicity during the chronic phase of T. congolense infection
Cited by: 4
Author(s): Benoı̂t Stijlemans, Hannelie Korf, Patrick De Baetseĺier, Lea Brys, Jo A. Van Ginderachter, Stefan Magez, Carl De Trez
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.ppat.1008287
Predicting nitroimidazole antibiotic resistance mutations in Mycobacterium tuberculosis with protein engineering
Cited by: 45
Author(s): Brendon M. Lee, Liam K. Harold, Deepak Almeida, Livnat Afriat-Jurnou, Htin Aung, Brian M. Forde, Kiel Hards, Sacha J. Pidot, F. Hafna Ahmed, A. Elaaf Mohamed, Matthew C. Taylor, Nicholas P. West, Timothy P. Stinear, Chris Greening, Scott A. Beatson, Eric L. Nuermberger, Gregory M. Cook, Colin J. Jackson
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.ppat.1008316
A mevalonate bypass system facilitates elucidation of plastid biology in malaria parasites
Cited by: 29
Author(s): Russell P Swift, Krithika Rajaram, Hans Liu, Amanda Dziedzic, Anne Jedlicka, Aleah D. Roberts, Krista Ann Matthews, Hugo Jhun, Namandjé N. Bumpus, Shivendra G. Tewari, Anders Wallqvist, Sean T. Prigge
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008312
TNF-α antagonists differentially induce TGF-β1-dependent resuscitation of dormant-like Mycobacterium tuberculosis
Cited by: 23
Author(s): Ainhoa Arbués, Dominique Brees, Salah-Dine Chibout, Todd Fox, Michael Kammüller, Damien Portevin
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008359
Single-cell glycolytic activity regulates membrane tension and HIV-1 fusion
Cited by: 28
Author(s): Charles A. Coomer, Irene Carlón-Andrés, Maro Iliopoulou, Michael L. Dustin, Ewoud B. Compeer, Alex A. Compton, Sergi Padilla‐Parra
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008355
Quantitative proteomics analysis reveals important roles of N-glycosylation on ER quality control system for development and pathogenesis in Magnaporthe oryzae
Cited by: 25
Author(s): Xiao‐Lin Chen, Caiyun Liu, Bozeng Tang, Zhiyong Ren, Guo‐Liang Wang, Wende Liu
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008382
The oxidative fumarase FumC is a key contributor for E. coli fitness under iron-limitation and during UTI
Cited by: 22
Author(s): Stephanie D. Himpsl, Allyson E. Shea, Jonathan S. Zora, Jolie A. Stocki, Dannielle Foreman, Christopher J. Alteri, Harry L. T. Mobley
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008333
African green monkeys avoid SIV disease progression by preventing intestinal dysfunction and maintaining mucosal barrier integrity
Cited by: 25
Author(s): Kevin D. Raehtz, Fredrik Barrenäs, Cuiling Xu, Kathleen Busman‐Sahay, Audrey Valentine, G. Lynn Law, Dongzhu Ma, Benjamin B. Policicchio, Viskam Wijewardana, Egidio Brocca-Cofano, Anita Trichel, Michael Gale, Brandon F. Keele, Jacob D. Estes, Cristian Apetrei, Ivona Pandrea
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008335
STING promotes NLRP3 localization in ER and facilitates NLRP3 deubiquitination to activate the inflammasome upon HSV-1 infection
Cited by: 104
Author(s): Wenbiao Wang, Dingwen Hu, Chao Wu, Yuqian Feng, Aixin Li, Weiyong Liu, Yingchong Wang, Keli Chen, Mingfu Tian, Feng Xiao, Qi Zhang, Muhammad Adnan Shereen, Weijie Chen, Pan Pan, Pin Wan, Kailang Wu, Jianguo Wu
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008352
High crossreactivity of human T cell responses between Lassa virus lineages
Cited by: 22
Author(s): Brian M. Sullivan, Saori Sakabe, Jessica N. Hartnett, Nhi Ngo, Augustine Goba, Mambu Momoh, John Demby Sandi, Lansana Kanneh, Beatrice Cubitt, Selma D. Garcia, Brian C. Ware, Dylan Kotliar, Refugio Robles‐Sikisaka, Karthik Gangavarapu, Luis M. Branco, Philomena Eromon, Ikponmwosa Odia, Ephraim Ogbaini-Emovon, Onikepe A. Folarin, Sylvanus Okogbenin, Peter O Okokhere, Christian Happi, Juan Carlos de la Torre, Pardis C. Sabeti, Kristian G. Andersen, Robert F. Garry, Donald S. Grant, John S. Schieffelin, Michael B. A. Oldstone
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008278
Antibiotic interactions shape short-term evolution of resistance in E. faecalis
Cited by: 18
Author(s): Ziah Dean, Jeff Maltas, Kevin B. Wood
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008294
Mycobacterium abscessus infection leads to enhanced production of type 1 interferon and NLRP3 inflammasome activation in murine macrophages via mitochondrial oxidative stress
Cited by: 36
Author(s): Bo Ram Kim, Byoung Jun Kim, Yoon Hoh Kook, Bum Joon Kim
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008405
Alcelaphine herpesvirus 1 genes A7 and A8 regulate viral spread and are essential for malignant catarrhal fever
Cited by: 3
Author(s): Françoise Myster, Meijiao Gong, Justine Javaux, Nicolás M. Suárez, Gavin S. Wilkie, Tim Connelley, Alain Vanderplasschen, Andrew J. Davison, Benjamin G Dewals
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008428
Heparan sulfate attachment receptor is a major selection factor for attenuated enterovirus 71 mutants during cell culture adaptation
Cited by: 13
Author(s): Kanae Kobayashi, Katsumi Mizuta, Sachiko Koike
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008386
Molecular basis of P[II] major human rotavirus VP8* domain recognition of histo-blood group antigens
Cited by: 23
Author(s): Shenyuan Xu, Luay U. Ahmed, Michael Robert Stuckert, Kristen Rose McGinnis, Yang Liu, Ming Tan, Pengwei Huang, Weiming Zhong, Dandan Zhao, Xi Jiang, Michael A. Kennedy
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008445
An improved animal model for herpesvirus encephalitis in humans
Cited by: 14
Author(s): Julia Sehl, Julia E. Hölper, Barbara G. Klupp, Christina Baumbach, Jens Peter Teifke, Thomas C. Mettenleiter
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008395
Baloxavir treatment of ferrets infected with influenza A(H1N1)pdm09 virus reduces onward transmission
Cited by: 26
Author(s): Leo Lee, Jie Zhou, Rebecca Frise, Daniel H. Goldhill, Paulina Koszalka, Edin Mifsud, Kaoru Baba, Takahiro Noda, Yuichi Ando, Kenji Satō, Aoe-Ishikawa Yuki, Toetsu Shishido, Takeki Uehara, Steffen Wildum, Elke Zwanziger, Neil Collinson, Klaus Kuhlbusch, Barry Clinch, Aeron C. Hurt, William Barclay
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008464
The B-cell inhibitory receptor CD22 is a major factor in host resistance to Streptococcus pneumoniae infection
Cited by: 6
Author(s): Vitor E. Fernandes, Giuseppe Ercoli, Alan Bénard, Carolin Brandl, Hannah Fahnenstiel, Jennifer Müller-Winkler, Georg F. Weber, Paul Denny, Lars Nitschke, Peter W. Andrew
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008507
TRIM34 restricts HIV-1 and SIV capsids in a TRIM5α-dependent manner
Cited by: 34
Author(s): Molly OhAinle, Kyusik Kim, Sevnur Komurlu Keceli, Abby Felton, Ed Campbell, Jeremy Luban, Michael Emerman
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008495
Cofactor and glycosylation preferences for in vitro prion conversion are predominantly determined by strain conformation
Cited by: 25
Author(s): Cassandra M. Burke, Daniel J. Walsh, Kenneth M. K. Mark, Nathan R. Deleault, Koren Nishina, Umberto Agrimi, Michele Angelo Di Bari, Surachai Supattapone
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1008441
Gut microbiota promotes host resistance to low-temperature stress by stimulating its arginine and proline metabolism pathway in adult Bactrocera dorsalis
Cited by: 62
Author(s): Muhammad Fahim Raza, Yichen Wang, Zhaohui Cai, Shuai Bai, Zhichao Yao, Umar Anwar Awan, Zhenyu Zhang, Weiwei Zheng, Hongyu Zhang
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.ppat.1009088
Rapid adaptation to human protein kinase R by a unique genomic rearrangement in rhesus cytomegalovirus
Cited by: 9
Author(s): Stephanie J. Child, Alexander L. Greninger, Adam P. Geballe
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.ppat.1009287
Baseline T cell immune phenotypes predict virologic and disease control upon SARS-CoV infection in Collaborative Cross mice
Cited by: 18
Author(s): Jessica B. Graham, Jessica L. Swarts, Sarah R. Leist, Alexandra Schäfer, Vineet D. Menachery, Lisa E. Gralinski, Sophia Jeng, Darla R. Miller, Michael A. Mooney, Shannon K. McWeeney, Martin T. Ferris, Fernando Pardo Manuel de Villena, Mark T. Heise, Ralph S. Baric, Jennifer M. Lund
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.ppat.1009302
Gnotobiotic rainbow trout (Oncorhynchus mykiss) model reveals endogenous bacteria that protect against Flavobacterium columnare infection
Cited by: 24
Author(s): David Pérez-Pascual, Sol Vendrell-Fernández, Bianca Audrain, Joaquín Bernal-Bayard, Rafael Patiño-Navarrete, Vincent Petit, Dimitri Rigaudeau, Jean‐Marc Ghigo
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.ppat.1009211
Divergent features of the coenzyme Q:cytochrome c oxidoreductase complex in Toxoplasma gondii parasites
Cited by: 18
Author(s): Jenni A. Hayward, Esther Rajendran, Soraya M. Zwahlen, Pierre Faou, Giel G. van Dooren
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.ppat.1009262
Capture and visualization of live Mycobacterium tuberculosis bacilli from tuberculosis patient bioaerosols
Cited by: 23
Author(s): Ryan Dinkele, Sophia Gessner, Andrea McKerry, Bryan Leonard, Ronnett Seldon, Anastasia Koch, Carl Morrow, Melitta Gqada, Mireille Kamariza, Carolyn R. Bertozzi, Brian R. Smith, Courtney McLoud, Andrew Evan Kamholz, Wayne A. Bryden, Charles J. Call, Gilla Kaplan, Valerie Mizrahi, Robin Wood, Digby F. Warner
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.ppat.1009271
In vivo dynamics and adaptation of HTLV-1-infected clones under different clinical conditions
Cited by: 8
Author(s): Mikiko Izaki, Jun-ichirou Yasunaga, Kisato Nosaka, Kenji Sugata, Hayato Utsunomiya, Yutaka Suehiro, Takafumi Shichijo, Akihisa Yamada, Yasuhiko Sugawara, Taizo Hibi, Yukihiro Inomata, Hirofumi Akari, Anat Melamed, Charles R. M. Bangham, Masao Matsuoka
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.ppat.1008787
Actin and an unconventional myosin motor, TgMyoF, control the organization and dynamics of the endomembrane network in Toxoplasma gondii
Cited by: 13
Author(s): Romain Carmeille, Porfirio Schiano Lomoriello, Parvathi Madhavi Devarakonda, Jacob A. Kellermeier, Aoife T. Heaslip
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.ppat.1009276
Preclinical transmission of prions by blood transfusion is influenced by donor genotype and route of infection
Cited by: 10
Author(s): Muhammad Khalid Farooq Salamat, A. Richard Alejo Blanco, Sandra McCutcheon, Kyle B. C. Tan, Paula Stewart, Helen Brown, Allister Smith, Christopher De Wolf, Martin H. Groschup, Dietmar Becher, Olivier Andréoletti, Marc Turner, Jean Manson, E. Fiona Houston
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.ppat.1009273
Pre-existing heterosubtypic immunity provides a barrier to airborne transmission of influenza viruses
Cited by: 10
Author(s): Valerie Le Sage, Jennifer E. Jones, Karen A. Kormuth, William J. Fitzsimmons, Eric Nturibi, Gabriella H Padovani, Claudia P. Arevalo, Andrea J French, Annika J. Avery, Richard Manivanh, Elizabeth E. McGrady, Amar R. Bhagwat, Adam S. Lauring, Scott E. Hensley, Seema S. Lakdawala
Software Mentions: 1
Published: over 5 years ago