10.1371/journal.ppat.1009745

Evolution of the interactions between GII.4 noroviruses and histo-blood group antigens: Insights from experimental and computational studies
Cited by: 2
Author(s): Yu Liang, Wei Bu Wang, Jing Zhang, Jun Hou, Fang Tang, Xue Feng Zhang, Li Fang Du, Ji Guo Su, Qi Ming Li
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.ppat.1009746

Glycometabolism regulates hepatitis C virus release
Cited by: 5
Author(s): Yu Tao, Qiankun Yang, Fangling Tian, Haishuang Chang, Zhenzheng Hu, Bowen Yu, Li Han, Yifan Xing, Yaming Jiu, Yongning He, Jin Zhong
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.ppat.1009740

CryoEM structure of the Nipah virus nucleocapsid assembly
Cited by: 16
Author(s): De-Sheng Ker, Huw T. Jenkins, Sandra J. Greive, A.A. Antson
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.ppat.1009668

Subacute SARS-CoV-2 replication can be controlled in the absence of CD8+ T cells in cynomolgus macaques
Cited by: 8
Author(s): Takushi Nomura, Haruyuki Yamamoto, Masako Nishizawa, Trang Thi Thu Hau, Shigeyoshi Harada, Hiroshi Ishii, Sayuri Seki, Midori Nakamura-Hoshi, Midori Okazaki, Sachie Daigen, Ai Kawana-Tachikawa, Noriyo Nagata, Naoko Iwata‐Yoshikawa, Nozomi Shiwa, Shun Iida, Harutaka Katano, Tadaki Suzuki, Eun-Sil Park, Ken Maeda, Yuriko Suzaki, Yasushi Ami, Tetsuro Matano
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.ppat.1009735

Pertactin contributes to shedding and transmission of Bordetella bronchiseptica
Cited by: 4
Author(s): Longhuan Ma, Kalyan K. Dewan, Dawn L. Taylor-Mulneix, Shannon M. Wagner, Bodo Linz, Israel Rivera, Yang Su, Amanda D. Caulfield, Uriel Blas‐Machado, Eric T. Harvill
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.ppat.1009724

A non-neutralizing antibody broadly protects against influenza virus infection by engaging effector cells
Cited by: 10
Author(s): Young-Chai Ko, Yueh‐Hsiang Yu, Yen-Fei Wu, Yeu-Yang Tseng, Chia-Lin Chen, King-Siang Goh, Hsin-Kai Liao, Ting-Hua Chen, Ting‐Jen R. Cheng, An‐Suei Yang, Chi‐Huey Wong, Che Ma, Kuo‐I Lin
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.ppat.1008603

DENV NS1 and MMP-9 cooperate to induce vascular leakage by altering endothelial cell adhesion and tight junction
Cited by: 29
Author(s): Pan Pan, Geng Li, Miaomiao Shen, Zhenyang Yu, Weiwei Ge, Zizhao Lao, Yaohua Fan, Keli Chen, Zhihao Ding, Wenbiao Wang, Pin Wan, Muhammad Adnan Shereen, Zhen Luo, Xulin Chen, Qiwei Zhang, Lin Li, Jianguo Wu
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.ppat.1009733

pMGF505-7R determines pathogenicity of African swine fever virus infection by inhibiting IL-1β and type I IFN production
Cited by: 68
Author(s): Jiangnan Li, Jie Song, Kang Li, Li Huang, Shijun Zhou, Liang Hu, Jun Zheng, Changyao Li, Xianfeng Zhang, Xijun He, Dongming Zhao, Zhigao Bu, Changjiang Weng
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.ppat.1009722

Human low-density lipoprotein receptor plays an important role in hepatitis B virus infection
Cited by: 13
Author(s): Ying-Ying Li, Guangxiang Luo
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.ppat.1008911

Host immunity increases Mycobacterium tuberculosis reliance on cytochrome bd oxidase
Cited by: 8
Author(s): Yuchen Cai, Eleni Jaecklein, Jared S. Mackenzie, Kadamba Papavinasasundaram, Andrew J. Olive, Xinchun Chen, Adrie J. C. Steyn, Christopher M. Sassetti
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0228394

Job postings in the substance use disorder treatment related sector during the first five years of Medicaid expansion
Cited by: 6
Author(s): Olga Scrivner, Thủy Nguyễn, Kosali Simon, Esmé Middaugh, Bledi Taska, Katy Börner
Software Mentions: 1
Published: over 6 years ago

10.1186/s12871-016-0177-2

The value of uncertainty in critical illness? An ethnographic study of patterns and conflicts in care and decision-making trajectories
Cited by: 29
Author(s): Irene J Higginson, Caroline Rumble, Cathy Shipman, Jonathan Koffman, Katherine E Sleeman, Myfanwy Morgan, Philip Hopkins, J. Noble, William Bernal, Sara Leonard, Odette Dampier, Wendy Prentice, Rachel Burman, Massimo Costantini
Software Mentions: 1
Published: almost 11 years ago

10.1186/1471-2105-9-S9-S2

Validation of an NSP-based (negative selection pattern) gene family identification strategy
Cited by: 3
Author(s): Ronald Frank, Cyriac Kandoth, Fikret Erçal
Software Mentions: 1
Published: about 18 years ago

10.1186/1471-2105-9-60

Inferring gene expression dynamics via functional regression analysis
Cited by: 44
Author(s): Hans‐Georg Müller, Jeng‐Min Chiou, Xiaoyan Leng
Software Mentions: 1
Published: over 18 years ago

10.1186/s12875-015-0324-8

Evaluation of reliability and validity of the General Practice Physical Activity Questionnaire (GPPAQ) in 60–74 year old primary care patients
Cited by: 58
Author(s): Shaleen Ahmad, Tess Harris, Elizabeth Limb, Sally Kerry, Christina Victor, Ulf Ekelund, Steve Iliffe, Peter H. Whincup, Carole Beighton, Michael Ussher, Derek G Cook
Software Mentions: 1
Published: about 11 years ago

10.1186/1471-2318-9-34

Quality of care assessment in geriatric evaluation and management units: construction of a chart review tool for a tracer condition
Cited by: 10
Author(s): Marie‐Jeanne Kergoat, Bernard-Simon Leclerc, Nicole Leduc, Jean-Gilles Latour, Katherine Berg, Aline Bolduc
Software Mentions: 1
Published: about 17 years ago

10.1186/s12913-019-4587-y

A framework for cross-cultural development and implementation of complex interventions to improve palliative care in nursing homes: the PACE steps to success programme
Cited by: 6
Author(s): Jo Hockley, Katherine Froggatt, Lieve Van den Block, Bregje D. Onwuteaka-Philipsen, Marika Kylänen, Katarzyna Szczerbińska, Giovanni Gambassi, Sophie Pautex, Sheila Payne
Software Mentions: 1
Published: almost 7 years ago

10.1186/1741-7015-11-213

Development and evaluation of the feasibility and effects on staff, patients, and families of a new tool, the Psychosocial Assessment and Communication Evaluation (PACE), to improve communication and palliative care in intensive care and during clinical uncertainty
Cited by: 38
Author(s): Irene J Higginson, Jonathan Koffman, Philip Hopkins, Wendy Prentice, Rachel Burman, Sara Leonard, Caroline Rumble, Jo Noble, Odette Dampier, William Bernal, Sue Hall, Myfanwy Morgan, Cathy Shipman
Software Mentions: 1
Published: almost 13 years ago

10.1186/s12916-020-01720-9

Decreased costs and retained QoL due to the ‘PACE Steps to Success’ intervention in LTCFs: cost-effectiveness analysis of a randomized controlled trial
Cited by: 2
Author(s): Anne Wichmann, Eddy Adang, Kris Vissers, Katarzyna Szczerbińska, Marika Kylänen, Sheila Payne, Giovanni Gambassi, Bregje D. Onwuteaka-Philipsen, Tinne Smets, Lieve Van den Block, Luc Deliëns, Myrra Vernooij‐Dassen, Yvonne Engels
Software Mentions: 1
Published: almost 6 years ago

10.1186/1472-6920-14-118

Study protocol for improving asthma outcomes through cross-cultural communication training for physicians: a randomized trial of physician training
Cited by: 4
Author(s): Minal R. Patel, Lara J. Thomas, Kausar Hafeez, Matthew Shankin, Margaret Wilkin, Randall W. Brown
Software Mentions: 1
Published: over 12 years ago

10.1186/s12891-017-1432-5

Efficacy of paracetamol, diclofenac and advice for acute low back pain in general practice: design of a randomized controlled trial (PACE Plus)
Cited by: 10
Author(s): Marco Schreijenberg, Pim A J Luijsterburg, Y. D. M. Van Trier, Dimitris Rizopoulos, Marc Koopmanschap, Leen Voogt, Christopher G. Maher, Bart W. Koes
Software Mentions: 1
Published: over 9 years ago

10.1186/s12891-018-2063-1

Discontinuation of the PACE Plus trial: problems in patient recruitment in general practice
Cited by: 11
Author(s): Marco Schreijenberg, Pim A J Luijsterburg, Y. D. M. Van Trier, Dimitris Rizopoulos, Marc Koopmanschap, Leen Voogt, Christopher G. Maher, Bart W. Koes
Software Mentions: 1
Published: over 8 years ago

10.1186/1471-2474-12-123

Systematic review and meta-analysis comparing land and aquatic exercise for people with hip or knee arthritis on function, mobility and other health outcomes
Cited by: 119
Author(s): Stephanie I Batterham, Sophie Heywood, Jennifer Lyn Keating
Software Mentions: 1
Published: over 15 years ago

10.1186/1471-2377-7-6

Protocol for the PACE trial: A randomised controlled trial of adaptive pacing, cognitive behaviour therapy, and graded exercise as supplements to standardised specialist medical care versus standardised specialist medical care alone for patients with the chronic fatigue syndrome/myalgic encephalomyelitis or encephalopathy
Cited by: 115
Author(s): Peter D White, Michael Sharpe, Trudie Chalder, Julia DeCesare, Rebecca Walwyn
Software Mentions: 1
Published: over 19 years ago

10.1186/s12904-021-00788-1

NUrsing Homes End of Life care Program (NUHELP): developing a complex intervention
Cited by: 7
Author(s): Emilio Mota‐Romero, Ana Alejandra Esteban‐Burgos, Daniel Puente‐Fernández, María Paz García‐Caro, César Hueso‐Montoro, Raquel Herrero-Hahn, Rafael Montoya‐Juárez
Software Mentions: 1
Published: about 5 years ago

10.1186/s12904-021-00734-1

No difference in effects of ‘PACE steps to success’ palliative care program for nursing home residents with and without dementia: a pre-planned subgroup analysis of the seven-country PACE trial
Cited by: 3
Author(s): Rose Miranda, Tinne Smets, Nele Van Den Noortgate, Jenny T. van der Steen, Luc Deliëns, Sheila Payne, Katarzyna Szczerbińska, Sophie Pautex, Liesbeth Van Humbeeck, Giovanni Gambassi, Marika Kylänen, Lieve Van den Block
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2458-13-1044

LINDA – a solution-focused low-intensity intervention aimed at improving health behaviors of young females: a cluster-randomized controlled trial
Cited by: 22
Author(s): Päivi Valve, Susanna Lehtinen-Jacks, Tiina Eriksson, Matti Lehtinen, Pirjo Lindfors, Marja‐Terttu Saha, Arja Rimpelä, Susanna Anglé
Software Mentions: 1
Published: almost 13 years ago

10.1186/s13102-021-00247-7

Comparative physical activity as a global question to assess physical activity among university students
Cited by: 1
Author(s): Wolfgang Uter, Alessia Brassat, Jennifer Hilger-Kolb
Software Mentions: 1
Published: over 5 years ago

10.1186/1472-6874-5-7

Changes in elderly women's health-related quality of life following discontinuation of hormone replacement therapy
Cited by: 9
Author(s): Debra A. Heller, Carol Gold, Frank M. Ahern, Kristine E. Pringle, Theresa J. Brown, Margaret R. Glessner
Software Mentions: 1
Published: over 21 years ago

10.1136/bmjopen-2018-028613

Optimising pacemaker therapy and medical therapy in pacemaker patients for heart failure: protocol for the OPT-PACE randomised controlled trial
Cited by: 1
Author(s): Maria F. Paton, John Gierula, Haqeel A. Jamil, Judith Lowry, Rowena Byrom, Richard Gillott, Hemant Chumun, Richard M Cubbon, David A. Cairns, Deborah Stocken, Mark T. Kearney, Klaus K. Witte
Software Mentions: 1
Published: about 7 years ago

10.3390/biom9120889

Exploration of the Misfolding Mechanism of Transthyretin Monomer: Insights from Hybrid-Resolution Simulations and Markov State Model Analysis
Cited by: 3
Author(s): Shuangyan Zhou, Jie Cheng, Ting Yang, Ming-Yue Ma, Wenying Zhang, Shuai Yuan, Glenn V. Lo, Yusheng Dou
Software Mentions: 1
Published: almost 7 years ago

10.1186/s13068-019-1460-5

Synthetic biology for evolutionary engineering: from perturbation of genotype to acquisition of desired phenotype
Cited by: 26
Author(s): Joseph Yang, Beomhee Kim, Gi Yeon Kim, Gyoo Yeol Jung, Sang Woo Seo
Software Mentions: 1
Published: over 7 years ago

10.1002/brb3.1341

Combining Prospective Acquisition CorrEction (PACE) with retrospective correction to reduce motion artifacts in resting state fMRI data
Cited by: 11
Author(s): Pradyumna Lanka, Gopikrishna Deshpande
Software Mentions: 1
Published: about 7 years ago

10.1186/s13058-017-0894-6

Breast Tissue Organisation and its Association with Breast Cancer Risk
Cited by: 10
Author(s): Maya Alsheh Ali, Kamila Czene, Louise Eriksson, Per Hall, Keith Humphreys
Software Mentions: 1
Published: about 9 years ago

10.1016/S1470-2045(19)30569-8

Intensity-modulated fractionated radiotherapy versus stereotactic body radiotherapy for prostate cancer (PACE-B): acute toxicity findings from an international, randomised, open-label, phase 3, non-inferiority trial
Cited by: 320
Author(s): D. Brand, A. Tree, Peter Ostler, H. van der Voet, Andrew Loblaw, William Chu, Daniel Ford, Shaun Tolan, Suneil Jain, Alexander S. Martin, John Staffurth, Philip Camilleri, Kiran Kancherla, J. Frew, Andrew Chan, Ian S. Dayes, Daniel R. Henderson, Stephanie Brown, Clare Cruickshank, Stephanie M. Burnett, A. Duffton, Clare Griffin, Victoria Hinder, Kirsty Morrison, O. Naismith, Emma Hall, Nicholas van As, D. Dodds, Éric Lartigau, Suzanne E. Patton, Alan Thompson, Mathias Winkler, Paula Wells, Timothy Lymberiou, Deanna Saunders, Maria Vilarino-Varela, Peter Vavassis, Theodoros Tsakiridis, R Carlson, George Rodrigues, Jean François Tanguay, Shahid Iqbal, Scott C. Morgan, Alina Mihai, A Li, Omar Din, Miguel Panades, Ros Wade, Y. Rimmer, John G. Armstrong, Nikhil Babu Oommen
Software Mentions: 1
Published: almost 7 years ago

10.15766/mep_2374-8265.10863

Preparing Medical Students to Be Physician Leaders: A Leadership Training Program for Students Designed and Led by Students
Cited by: 14
Author(s): Kristen Richard, Michael G. Noujaim, Luanne A. Thorndyke, Melissa A. Fischer
Software Mentions: 1
Published: almost 7 years ago

10.1186/1477-7819-3-17

Cited by: 75
Author(s): H Ramesh, Daniel Pope, R Gennari, Riccardo A. Audisio
Software Mentions: 1
Published: over 21 years ago

10.1186/1477-7819-10-88

Comprehensive geriatric assessment for older women with early breast cancer – a systematic review of literature
Cited by: 34
Author(s): Ruth M. Parks, Radhika Lakshmanan, L. Winterbottom, D. A. L. Morgan, Karen Cox, Kwok-Leung Cheung
Software Mentions: 1
Published: over 14 years ago

10.3390/pharmacy8020087

Association of a Novel Medication Risk Score with Adverse Drug Events and Other Pertinent Outcomes Among Participants of the Programs of All-Inclusive Care for the Elderly
Cited by: 22
Author(s): David Bankes, Hubert Jin, Stephanie Finnel, Véronique Michaud, Calvin H. Knowlton, Jacques Turgeon, Alan Stein
Software Mentions: 1
Published: over 6 years ago

10.3390/pharmacy6040132

Communications Skills in the Pharmacy Profession: A Cross Sectional Survey of UK Registered Pharmacists and Pharmacy Educators
Cited by: 11
Author(s): Zahraa Jalal, Anthony R. Cox, Neera Goel, Nikita Vaitha, Kathryn King, Jonathan Ward
Software Mentions: 1
Published: almost 8 years ago

10.1039/c9cp05912a

High throughput sequencing of <i>in vitro</i> selections of mRNA-displayed peptides: data analysis and applications
Cited by: 7
Author(s): Celia Blanco, Samuel Verbanic, Burckhard Seelig, Irene Chen
Software Mentions: 1
Published: over 6 years ago

10.1186/s40814-017-0212-1

Developing Substance Use Programming for Person-Oriented Recovery and Treatment (SUPPORT): protocol for a pilot randomized controlled trial
Cited by: 4
Author(s): Dennis P. Watson, Bradley Ray, Lisa Robison, Huiping Xu, Rhiannon Edwards, Michelle P. Salyers, James H. Hill, Sarah Shue
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pcbi.1009180

A benchmark dataset for canopy crown detection and delineation in co-registered airborne RGB, LiDAR and hyperspectral imagery from the National Ecological Observation Network
Cited by: 14
Author(s): Ben G. Weinstein, Sarah J. Graves, Sergio Marconi, Aditya Singh, Alina Zare, Dylan Stewart, Stephanie A. Bohlman, Ethan P. White
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pcbi.1008784

Numerical analysis of the impact of cytoskeletal actin filament density alterations onto the diffusive vesicle-mediated cell transport
Cited by: 4
Author(s): Daniel Ch. Haspinger, Sandra Klinge, Gerhard Holzapfel
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1009089

A zero inflated log-normal model for inference of sparse microbial association networks
Cited by: 7
Author(s): Vincent Prost, Stéphane Gazut, Thomas Brüls
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1007623

Improving probabilistic infectious disease forecasting through coherence
Cited by: 4
Author(s): Graham Casey Gibson, Kelly R. Moran, Nicholas G. Reich, Dave Osthus
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1008418

Differential effects of propofol and ketamine on critical brain dynamics
Cited by: 25
Author(s): Thomas F. Varley, Olaf Sporns, Aina Puce, John M. Beggs
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1007780

Unveiling dynamic metabolic signatures in human induced pluripotent and neural stem cells
Cited by: 5
Author(s): João V. Sá, Daniel Simão, Ana Paula Terrasso, Marta M. Silva, Catarina Brito, Inês A. Isidro, Paula M. Alves, Manuel J.T. Carrondo
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1008081

Predicting precision grip grasp locations on three-dimensional objects
Cited by: 20
Author(s): Lina K Klein, Guido Maiello, Vivian C. Paulun, Roland W. Fleming
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pcbi.1008172

Dynamic estimation of auditory temporal response functions via state-space models with Gaussian mixture process noise
Cited by: 6
Author(s): Sina Miran, Alessandro Presacco, Jonathan Z. Simon, Michael C. Fu, Solomon Marcus, Behtash Babadi
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pcbi.1008055

A multiscale model of complex endothelial cell dynamics in early angiogenesis
Cited by: 25
Author(s): Daria Stepanova, Helen M. Byrne, Philip K. Maini, Tomás Alarcón
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1007402

A system for tracking whisker kinematics and whisker shape in three dimensions
Cited by: 14
Author(s): Rasmus S. Petersen, Andrea Colins Rodriguez, Mathew H. Evans, Dario Campagner, Michaela S. E. Loft
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1008275

Machine learning to predict mesenchymal stem cell efficacy for cartilage repair
Cited by: 7
Author(s): Yu Yang Fredrik Liu, Yin Lu, Steve Oh, Gareth Conduit
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pcbi.1009348

The role of memory in non-genetic inheritance and its impact on cancer treatment resistance
Cited by: 11
Author(s): Tyler Cassidy, Daniel Nichol, Mark Robertson-Tessi, Morgan Craig, Alexander R.A. Anderson
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pcbi.1009143

Adaptation of metabolite leakiness leads to symbiotic chemical exchange and to a resilient microbial ecosystem
Cited by: 6
Author(s): Jumpei F. Yamagishi, Nen Saito, Kunihiko Kaneko
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pcbi.1007878

Estimating a novel stochastic model for within-field disease dynamics of banana bunchy top virus via approximate Bayesian computation
Cited by: 6
Author(s): Abhishek Varghese, Christopher Drovandi, Antonietta Mira, Kerrie Mengersen
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1007883

Differentiation of Cytopathic Effects (CPE) induced by influenza virus infection using deep Convolutional Neural Networks (CNN)
Cited by: 4
Author(s): Ting-En Wang, Tai‐Ling Chao, Hsin-Tsuen Tsai, Pei-Yu Lin, Yen-Lung Tsai, Sui‐Yuan Chang
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1009165

SCMFMDA: Predicting microRNA-disease associations based on similarity constrained matrix factorization
Cited by: 34
Author(s): Lei Li, Zhen Gao, Yutian Wang, Mingwen Zhang, Jian Ni, Chun-Hou Zheng, Yansen Su
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pcbi.1007649

Cytoskeleton polarity is essential in determining orientational order in basal bodies of multi-ciliated cells
Cited by: 4
Author(s): T. Namba, Shuji Ishihara
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1008535

Lassa viral dynamics in non-human primates treated with favipiravir or ribavirin
Cited by: 20
Author(s): Guillaume Lingas, Kyle Rosenke, David Safronetz, Jérémie Guedj
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1009344

The color phi phenomenon: Not so special, after all?
Cited by: 1
Author(s): Lars Keuninckx, Axel Cleeremans
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pcbi.1008548

Functional parcellation of mouse visual cortex using statistical techniques reveals response-dependent clustering of cortical processing areas
Cited by: 3
Author(s): Mari Ganesh Kumar, Ming Hu, Aadhirai Ramanujan, Mriganka Sur, Hema A. Murthy
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1009087

Predicting seasonal influenza using supermarket retail records
Cited by: 4
Author(s): Ioanna Miliou, Xinyue Xiong, Salvatore Rinzivillo, Qian Zhang, Giulio Rossetti, Fosca Giannotti, Dino Pedreschi, Alessandro Vespignani
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pcbi.1007727

Gene expression noise can promote the fixation of beneficial mutations in fluctuating environments
Cited by: 14
Author(s): Michael Schmutzer, Andreas Wagner
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pcbi.1009121

Contrasting factors associated with COVID-19-related ICU admission and death outcomes in hospitalised patients by means of Shapley values
Cited by: 8
Author(s): Massimo Cavallaro, Haseeb Moiz, Matthew James Keeling, Noel D. McCarthy
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pcbi.1008744

Vocalization with semi-occluded airways is favorable for optimizing sound production
Cited by: 13
Author(s): Ingo R. Titze, Anil Palaparthi, Karin Titze Cox, Amanda Stark, Lynn Maxfield, Brian Manternach
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1007944

Combined model-free and model-sensitive reinforcement learning in non-human primates
Cited by: 12
Author(s): Bruno Miranda, W. M. Nishantha Malalasekera, Timothy E.J. Behrens, Peter Dayan, Steven W. Kennerley
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pcbi.1009208

The effect of natural selection on the propagation of protein expression noise to bacterial growth
Cited by: 5
Author(s): Laurens H. J. Krah, Rutger Hermsen
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pcbi.1007432

From space to time: Spatial inhomogeneities lead to the emergence of spatiotemporal sequences in spiking neuronal networks
Cited by: 21
Author(s): Sebastian Spreizer, Ad Aertsen, Arvind Kumar
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pcbi.1007862

Representation of foreseeable choice outcomes in orbitofrontal cortex triplet-wise interactions
Cited by: 7
Author(s): Emili Balaguer‐Ballester, Ramon Nogueira, Juan M. Abofalia, Rubén Moreno‐Bote, Maria V. Sanchez-Vives
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pcbi.1007947

Natural scene statistics predict how humans pool information across space in surface tilt estimation
Cited by: 9
Author(s): Seha Kim, Johannes Burge
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pcbi.1008000

Multiplexing rhythmic information by spike timing dependent plasticity
Cited by: 8
Author(s): Nimrod Sherf, Maoz Shamir
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pcbi.1008545

Sensor-based localization of epidemic sources on human mobility networks
Cited by: 3
Author(s): Jun Li, Juliane Manitz, Enrico Bertuzzo, Eric D. Kolaczyk
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1008145

Determining the interaction status and evolutionary fate of duplicated homomeric proteins
Cited by: 8
Author(s): Saurav Mallik, Dan S. Tawfik
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pcbi.1007838

Estimation of the force of infection and infectious period of skin sores in remote Australian communities using interval-censored data
Cited by: 5
Author(s): Michael J. Lydeamore, Patricia T. Campbell, David J. Price, Yue Wu, Adrian J. Marcato, Will Cuningham, Jonathan R. Carapetis, Ross M. Andrews, Malcolm McDonald, Jodie McVernon, Steven Y C Tong, James M. McCaw
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pcbi.1007857

Towards optogenetic vision restoration with high resolution
Cited by: 19
Author(s): Ulisse Ferrari, Stéphane Deny, Abhishek Sengupta, Romain Caplette, Francesco Trapani, José‐Alain Sahel, Deniz Dalkara, Serge Picaud, Jens Duebel
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pcbi.1007171

Interkinetic nuclear movements promote apical expansion in pseudostratified epithelia at the expense of apicobasal elongation
Cited by: 8
Author(s): Marina A. Ferreira, Evangéline Despin‐Guitard, Fernando Duarte, Pierre Degond, Eric Théveneau
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1007820

Agent-based and continuous models of hopper bands for the Australian plague locust: How resource consumption mediates pulse formation and geometry
Cited by: 14
Author(s): Andrew J. Bernoff, Michael Culshaw-Maurer, Rebecca A. Everett, Maryann E. Hohn, Christopher Strickland, Jasper Weinburd
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1008289

Reconciling emergences: An information-theoretic approach to identify causal emergence in multivariate data
Cited by: 49
Author(s): Fernando Rosas, Pedro A. M. Mediano, Henrik Jeldtoft Jensen, Anil K. Seth, Adam B. Barrett, Robin Carhart‐Harris, Daniel Bor
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1009365

Ascension of Chlamydia is moderated by uterine peristalsis and the neutrophil response to infection
Cited by: 2
Author(s): Torrington Callan, Stephen Woodcock
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pcbi.1008498

CHOmics: A web-based tool for multi-omics data analysis and interactive visualization in CHO cell lines
Cited by: 4
Author(s): Dongdong Lin, Hima Bindu Yalamanchili, Xinmin Zhang, Nathan E. Lewis, Christina Alves, Joost Groot, Jens Aage Hansen, Sara Petersen Bjørn, Tune Wulff, Bjørn Gunnar Voldborg, Yizhou Zhou, Baohong Zhang
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1007728

Buffering and total calcium levels determine the presence of oscillatory regimes in cardiac cells
Cited by: 2
Author(s): Miquel Marchena, Blas Echebarria, Yohannes Shiferaw, Enrique Alvarez-Lacalle
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pcbi.1009257

Label-free imaging and classification of live P. falciparum enables high performance parasitemia quantification without fixation or staining
Cited by: 8
Author(s): Paul Lebel, Rebekah Dial, Venkata Naga Pranathi Vemuri, Valentina E. Garcia, Joseph L. DeRisi, Rafael Gómez-Sjöberg
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pcbi.1008948

Small subpopulations of β-cells do not drive islet oscillatory [Ca2+] dynamics via gap junction communication
Cited by: 19
Author(s): JaeAnn M. Dwulet, Jennifer K. Briggs, Richard K.P. Benninger
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1009025

Expectancy-based rhythmic entrainment as continuous Bayesian inference
Cited by: 16
Author(s): Jonathan Cannon
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1007489

Path integration in large-scale space and with novel geometries: Comparing vector addition and encoding-error models
Cited by: 16
Author(s): Sevan K. Harootonian, Robert Wilson, Lukáš Hejtmánek, Eli M. Ziskin, Arne D. Ekstrom
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1009001

Estimation of country-level incidence of early-onset invasive Group B Streptococcus disease in infants using Bayesian methods
Cited by: 2
Author(s): Bronner P. Gonçalves, Simon R. Procter, Samuel Clifford, Artemis Koukounari, Proma Paul, Arie Y. Lewin, Mark Jit, Joy E Lawn
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1008704

A kinetic model of the central carbon metabolism for acrylic acid production in Escherichia coli
Cited by: 8
Author(s): Alexandre Oliveira, Joana Lúcia Lima Correia Rodrigues, Eugénio C. Ferreira, L. R. Rodrigues, Óscar Dias
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1008758

Selection of stimulus parameters for enhancing slow wave sleep events with a neural-field theory thalamocortical model
Cited by: 1
Author(s): Fidel Torres, Patricio Orio, María-José Escobar
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pcbi.1008435

Inferring a network from dynamical signals at its nodes
Cited by: 7
Author(s): Corey Weistuch, Luca Agozzino, Lilianne R. Mujica‐Parodi, Ken A. Dill
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pcbi.1008272

Visually guided homing of bumblebees in ambiguous situations: A behavioural and modelling study
Cited by: 7
Author(s): Charlotte Doussot, O. Bertrand, Martin Egelhaaf
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pcbi.1008850

Novel anti-malarial drug strategies to prevent artemisinin partner drug resistance: A model-based analysis
Cited by: 6
Author(s): Amber Kunkel, Michael White, Patrice Piola
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1007457

A mechanistic, stigmergy model of territory formation in solitary animals: Territorial behavior can dampen disease prevalence but increase persistence
Cited by: 8
Author(s): Lauren A. White, Sue VandeWoude, Meggan E. Craft
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1007969

Emergence of cooperative bistability and robustness of gene regulatory networks
Cited by: 20
Author(s): Shintaro Nagata, Macoto Kikuchi
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pcbi.1007614

Stimulus-choice (mis)alignment in primate area MT
Cited by: 20
Author(s): Yuan Zhao, Jacob L. Yates, Aaron J. Levi, Alexander C. Huk, Il Park
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1007707

Tracking progress towards malaria elimination in China: Individual-level estimates of transmission and its spatiotemporal variation using a diffusion network approach
Cited by: 13
Author(s): Isobel Routledge, Shengjie Lai, Katherine E. Battle, Azra C Ghani, Manuel Gomez-Rodriguez, Kyle Gustafson, Swapnil Mishra, H. Juliette T. Unwin, Joshua L. Proctor, Andrew J. Tatem, Zhongjie Li, Samir Bhatt
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1009092

Multitask learning over shared subspaces
Cited by: 1
Author(s): Nicholas Menghi, Kemal Kacar, Will D. Penny
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pcbi.1008798

Accurate contact-based modelling of repeat proteins predicts the structure of new repeats protein families
Cited by: 6
Author(s): Claudio Bassot, Arne Elofsson
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1007805

Learning action-oriented models through active inference
Cited by: 67
Author(s): Alexander Tschantz, Anil K. Seth, Christopher L. Buckley
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1007670

Long-range correlation in protein dynamics: Confirmation by structural data and normal mode analysis
Cited by: 26
Author(s): Qianying Tang, Kunihiko Kaneko
Software Mentions: 1
Published: over 6 years ago