10.1371/journal.pone.0240474

Were domestic camelids present on the prehispanic South American agricultural frontier? An ancient DNA study
Cited by: 7
Author(s): Cinthia Carolina Abbona, Gustavo Adolfo, Jeff Johnson, Tracy Kim, Adolfo Gil, Steve Wolverton
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0223031

Lipidomics analysis of juveniles’ blue mussels (Mytilus edulis L. 1758), a key economic and ecological species
Cited by: 13
Author(s): Vincenzo Alessandro Laudicella, Christine Beveridge, Stefano Carboni, Sofia C. Franco, Mary K. Doherty, Nina Long, Elaine Mitchell, Michele S. Stanley, Phillip D. Whitfield, Adam D. Hughes
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0238202

Immune and sex-biased gene expression in the threatened Mojave desert tortoise, Gopherus agassizii
Cited by: 2
Author(s): Cindy Xu, Greer A. Dolby, K. Kristina Drake, Todd C. Esque, Kenro Kusumi
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0237894

Emerging fungal pathogen of an invasive grass: Implications for competition with native plant species
Cited by: 4
Author(s): Amy E. Kendig, Vida J. Svahnström, Ashish Adhikari, Philip F. Harmon, S. Luke Flory
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0219633

Contributions to human breast milk microbiome and enteromammary transfer of Bifidobacterium breve
Cited by: 72
Author(s): Kattayoun Kordy, Thaidra Gaufin, Martin Mwangi, Ли Фан, Chiara Cerini, Dong Hoon Lee, Helty Adisetiyo, Cora L. Woodward, Pia S. Pannaraj, Nicole H. Tobin, Grace M. Aldrovandi
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0234760

PeskAAS: A near-real-time, open-source monitoring and analytics system for small-scale fisheries
Cited by: 9
Author(s): Alexander Tilley, Joctan Dos Reis Lopes, Shaun P. Wilkinson
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0244430

PFP-WGAN: Protein function prediction by discovering Gene Ontology term correlations with generative adversarial networks
Cited by: 7
Author(s): Seyyede Fatemeh Seyyedsalehi, Mahdieh Soleymani, Hamid R. Rabiee, Mohammad R. K. Mofrad
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0230931

Motivation to access laparoscopic skills training: Results of a Canadian survey of obstetrics and gynecology residents
Cited by: 4
Author(s): Jocelyn Stairs, Bradley W. Bergey, Finlay Maguire, Stephanie Scott
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0231925

Determinants and constraints of feather growth
Cited by: 10
Author(s): Lukas Jenni, Kathrin Ganz, Pietro Milanesi, Raffael Winkler
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0255298

Northern bobwhite select for shrubby thickets interspersed in grasslands during fall and winter
Cited by: 2
Author(s): Alisha R. Mosloff, Mitch D. Weegman, Frank R. Thompson, Thomas R. Thompson
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0254730

Microbial assemblages and methanogenesis pathways impact methane production and foaming in manure deep-pit storages
Cited by: 2
Author(s): Fan Yang, Daniel S. Andersen, Steven Trabue, Angela D. Kent, Laura M. Pepple, Richard S. Gates, Adina Howe
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pgen.1009512

The actin nucleation factors JMY and WHAMM enable a rapid Arp2/3 complex-mediated intrinsic pathway of apoptosis
Cited by: 11
Author(s): Virginia L King, Nathan K. Leclair, Alyssa Coulter, Kenneth Campellone
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0253814

Mortality and morbidity of asthma and chronic obstructive pulmonary disease associated with ambient environment in metropolitans in Taiwan
Cited by: 9
Author(s): Yasmin Zafirah, Yu‐Kai Lin, Gerry Andhikaputra, Liwen Deng, Fung‐Chang Sung, Yu Chun Wang
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0255675

Machine-learning model selection and parameter estimation from kinetic data of complex first-order reaction systems
Cited by: 3
Author(s): László Zimányi, Áron Sipos, Ferenc Sarlós, Rita Nagypál, Géza I. Groma
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0232853

An assessment of the impacts of litter treatments on the litter quality and broiler performance: A systematic review and meta-analysis
Cited by: 17
Author(s): Taiani dos Santos de Toledo, Aline Arassiana Piccini Roll, Fernando Rutz, Henrique Müller Dallmann, Marcos Antonio Dai Prá, Fábio Pereira Leivas Leite, Victor Fernando Büttow Roll
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0231840

Commercial integrated crop-livestock systems achieve comparable crop yields to specialized production systems: A meta-analysis
Cited by: 37
Author(s): Caitlin A. Peterson, Leonardo Deiss, Amélie C. M. Gaudin
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0235741

Changes in infant non-nutritive sucking throughout a suck sample at 3-months of age
Cited by: 6
Author(s): Emily Zimmerman, Thomas Carpenito, Alaina Martens
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.ppat.1009789

Pulmonary mesenchymal stem cells are engaged in distinct steps of host response to respiratory syncytial virus infection
Cited by: 5
Author(s): Melanie Brügger, Thomas Démoulins, G. Tuba Barut, Béatrice Zumkehr, Blandina I. Oliveira Esteves, Kemal Mehinagic, Quentin Haas, Aline Schögler, Marie‐Anne Rameix‐Welti, Jean François Eléouët, Ueli Moehrlen, Thomas Marti, Ralph A. Schmid, Artur Summerfield, Horst Posthaus, Nicolas Ruggli, Sean Hall, Marco P. Alves
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0245222

Early Holocene Scandinavian foragers on a journey to affluence: Mesolithic fish exploitation, seasonal abundance and storage investigated through strontium isotope ratios by laser ablation (LA‐MC-ICP‐MS)
Cited by: 9
Author(s): Adam Boëthius, Mathilda Kjällquist, Melanie Kielman‐Schmitt, Torbjörn Ahlström, Lars Larsson
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0241253

CaBagE: A Cas9-based Background Elimination strategy for targeted, long-read DNA sequencing
Cited by: 16
Author(s): Amelia D. Wallace, Thomas A Sasani, Jordan Swanier, Brooke L. Gates, Jeff Greenland, Brent S. Pedersen, Katherine E. Varley, Aaron R. Quinlan
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0228206

Mixed evidence for the relationship between periodontitis and Alzheimer’s disease: A bidirectional Mendelian randomization study
Cited by: 20
Author(s): Yi‐Qian Sun, Rebecca C Richmond, Yue Chen, Xiao-Mei Mai
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0241209

Pediatric emergency care in a low-income country: Characteristics and outcomes of presentations to a tertiary-care emergency department in Mozambique
Cited by: 6
Author(s): Valentina Brugnolaro, Laura Nai Fovino, Serena Calgaro, Giovanni Putoto, Arlindo Muhelo, Darío Gregori, Danila Azzolina, Silvia Bressan, Liviana Da Dalt
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0244408

Genome-wide association study and pathway analysis identify NTRK2 as a novel candidate gene for litter size in sheep
Cited by: 13
Author(s): Seyed Mehdi Esmaeili-Fard, Mohsen Gholizadeh, Seyed Hasan Hafezian, Rostam Abdollahi-Arpanahi
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0238385

Replicable simulation of distal hot water premise plumbing using convectively-mixed pipe reactors
Cited by: 3
Author(s): Maryellen Spencer, Abraham C. Cullom, William J. Rhoads, Amy Pruden, Marc Edwards
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pgen.1008452

Transcriptional and genomic parallels between the monoxenous parasite Herpetomonas muscarum and Leishmania
Cited by: 12
Author(s): Megan A. Sloan, Karen Brooks, Thomas D. Otto, Mandy Sanders, James A. Cotton, Petros Ligoxygakis
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pgen.1009557

Copy number signature analysis tool and its application in prostate cancer reveals distinct mutational processes and clinical outcomes
Cited by: 51
Author(s): S Wang, Huimin Li, Mei Song, Ziyu Tao, Tao Wu, Zaoke He, Xiangyu Zhao, Kai Wu, Xue Song Liu
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0245064

Racial and geographic variation in effects of maternal education and neighborhood-level measures of socioeconomic status on gestational age at birth: Findings from the ECHO cohorts
Cited by: 19
Author(s): Anne L. Dunlop, Alicynne Glazier Essalmi, Lyndsay Alvalos, Carrie V. Breton, Carlos A. Camargo, Whitney Cowell, Dana Dabelea, Stephen R. Dager, Cristiane S. Duarte, Amy J. Elliott, Raina N. Fichorova, James E. Gern, Monique M. Hedderson, Elizabeth Hom Thepaksorn, Kathi Huddleston, Margaret R. Karagas, Ken Kleinman, Leslie D. Leve, Ximin Li, Yijun Li, Augusto A. Litonjua, Yunin Ludena-Rodriguez, Juliette C. Madan, Julio Mateus Nino, Cynthia McEvoy, Thomas G. O’Connor, Amy Padula, Nigel Paneth, Frederica P. Perera, Sheela Sathyanarayana, Rebecca J. Schmidt, Robert T. Schultz, Jessica Snowden, Joseph B. Stanford, Leonardo Trasande, Heather E. Volk, William Wheaton, Rosalind J. Wright, Monica McGrath
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0229531

Frailty predicts surgical complications after kidney transplantation. A propensity score matched study
Cited by: 19
Author(s): Milena dos Santos Mantovani, Nyara Coelho de Carvalho, Thomáz Archangelo, Luís Gustavo Modelli de Andrade, Sebastião Pires Ferreira Filho, Ricardo de Souza Cavalcante, Paulo Roberto Kawano, Sílvia Justina Papini, Nara Aline Costa, Ricardo Augusto Monteiro de Barros Almeida
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0246508

Relationships between fox populations and rabies virus spread in northern Canada
Cited by: 17
Author(s): Susan A. Nadin-Davis, Emilie Falardeau, Alex Flynn, Hugh Whitney, H. Dawn Marshall
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pgen.1008595

Super-resolution imaging of RAD51 and DMC1 in DNA repair foci reveals dynamic distribution patterns in meiotic prophase
Cited by: 22
Author(s): Johan A. Slotman, Maarten W. Paul, Fabrizia Carofiglio, H. Martijn de Gruiter, Tessa Vergroesen, Lieke Koornneef, Wiggert A. van Cappellen, Adriaan B. Houtsmuller, Willy M. Baarends
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0242008

Measuring adverse events following hip arthroplasty surgery using administrative data without relying on ICD-codes
Cited by: 5
Author(s): Martin Magnéli, Maria Unbeck, Cecilia Rogmark, Olof Sköldenberg, Max Gordon
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0235263

Visualisation tools for dependent peptide searches to support the exploration of in vitro protein modifications
Cited by: 2
Author(s): George W. Preston, Liping Yang, David H. Phillips, Claudia S. Maier
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0236679

Characterisation of protein isoforms encoded by the Drosophila Glycogen Synthase Kinase 3 gene shaggy
Cited by: 4
Author(s): Dagmara Korona, Daniel J.H. Nightingale, Bertrand Fabre, Michael G. Nelson, Bettina Fischer, Glynnis Johnson, Jonathan G. Lees, Simon J. Hubbard, Kathryn S. Lilley, Steven Russell
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0248341

Quantity and quality: Normative open-access neuroimaging databases
Cited by: 2
Author(s): S.J.S. Isherwood, Pierre‐Louis Bazin, Anneke Alkemade, Birte U. Forstmann
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.ppat.1009644

Manipulation of the unfolded protein response: A pharmacological strategy against coronavirus infection
Cited by: 46
Author(s): Liliana Echavarría-Consuegra, G. M. W. Cook, Idoia Busnadiego, Charlotte Lefèvre, Sarah Keep, Katherine A. Brown, Nicole Doyle, Giulia Dowgier, Krzysztof Franaszek, Nathan Moore, Stuart G. Siddell, Erica Bickerton, Benjamin G. Hale, Andrew E. Firth, Ian Brierley, Nerea Irigoyen
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.ppat.1009461

Deconvolution of intergenic polymorphisms determining high expression of Factor H binding protein in meningococcus and their association with invasive disease
Cited by: 4
Author(s): Marco Spinsanti, Tarcisio Brignoli, Margherita Bodini, Lucia Eleonora Fontana, Matteo De Chiara, Alessia Biolchi, Alessandro Muzzi, Vincenzo Scarlato, Isabel Delany
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0233597

Diversification rate vs. diversification density: Decoupled consequences of plant height for diversification of Alooideae in time and space
Cited by: 9
Author(s): Florian C. Boucher, Anne-Sophie Quatela, Allan G. Ellis, G. Anthony Verboom
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.ppat.1009697

Listeria monocytogenes infection rewires host metabolism with regulatory input from type I interferons
Cited by: 3
Author(s): Duygu Demiröz, Ekaterini Platanitis, Marsha Bryant, Philipp Fischer, Michaela Prchal-Murphy, Alexander Lercher, Caroline Lassnig, Manuela Baccarini, Mathias Müller, Andréas Bergthaler, Veronika Sexl, Marlies Dolezal, Thomas Decker
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0252533

Large scale meta-analysis of preclinical toxicity data for target characterisation and hypotheses generation
Cited by: 2
Author(s): Jordi Muñoz‐Muriedas
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.ppat.1009552

Intraspecific variation in immune gene expression and heritable symbiont density
Cited by: 8
Author(s): Holly L. Nichols, Elliott B. Goldstein, Omid Saleh Ziabari, Benjamin J. Parker
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0250413

Exploring the relationship between maternal prenatal stress and brain structure in premature neonates
Cited by: 6
Author(s): Alexandra Lautarescu, Laila Hadaya, Michael C. Craig, Antonis Makropoulos, Dafnis Batallé, Chiara Nosarti, A. David Edwards, Serena Counsell, Suresh Victor
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.ppat.1009272

Nucleosome landscape reflects phenotypic differences in Trypanosoma cruzi life forms
Cited by: 10
Author(s): Alex Ranieri Jerônimo Lima, Christiane B. de Araujo, Saloê Bispo, José Salvatore Leister Patané, Ariel Mariano Silber, Maria Carolina Elias, Júlia Pinheiro Chagas da Cunha
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.ppat.1009234

Winter is coming–Temperature affects immune defenses and susceptibility to Batrachochytrium salamandrivorans
Cited by: 20
Author(s): Edward Davis Carter, Molly C. Bletz, Mitchell Le Sage, Brandon LaBumbard, Louise A. Rollins‐Smith, Douglas C. Woodhams, Debra L. Miller, Matthew J. Gray
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0247630

The effect of growth rate on otolith-based discrimination of cod (Gadus morhua) ecotypes
Cited by: 2
Author(s): Einar Pétur Jónsson, Steven E. Campana, Jón Sólmundsson, Klara B. Jakobsdóttir, Hlynur Bárðarson
Software Mentions: 4
Published: almost 5 years ago

10.1371/journal.pone.0246027

Procalcitonin, C-reactive protein, neutrophil gelatinase-associated lipocalin, resistin and the APTT waveform for the early diagnosis of serious bacterial infection and prediction of outcome in critically ill children
Cited by: 5
Author(s): Maryke Nielsen, Paul Baines, Rebecca Jennings, Sarah Siner, Ruwanthi Kolamunnage-Donà, Paul Newland, Matthew Peak, Christine Chesters, Graham Jeffers, Colin Downey, Caroline Broughton, Lynsey McColl, Jennifer Preston, Anthony Mckeever, Stéphane Paulus, Nigel Cunliffe, Enitan D. Carrol
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0251366

Inequality indices to monitor geographic differences in incidence, mortality and fatality rates over time during the COVID-19 pandemic
Cited by: 4
Author(s): Kirsi Manz, Ulrich Mansmann
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0242158

Calcium salts of long-chain fatty acids from linseed oil decrease methane production by altering the rumen microbiome in vitro
Cited by: 7
Author(s): Yoshibumi Sato, Keiko Tominaga, Hirotatsu Aoki, Masayuki Murayama, Kazato Oishi, Hiroyuki Hirooka, Takashi Yoshida, Hajime Kumagai
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.ppat.1009340

Mitochondrial morphodynamics alteration induced by influenza virus infection as a new antiviral strategy
Cited by: 18
Author(s): Irene Pila-Castellanos, Diana Molino, Joe McKellar, Laetitia Linès, Juliane Da Graça, Marine Tauziet, Laurent Chanteloup, Ivan Mikaélian, Laurène Meyniel-Schicklin, Patrice Codogno, Jacky Vonderscher, Cédric Delevoye, Olivier Moncorgé, Eric Meldrum, Caroline Goujon, Étienne Morel, Benoı̂t de Chassey
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0246869

Uniting against a common enemy: Perceived outgroup threat elicits ingroup cohesion in chimpanzees
Cited by: 8
Author(s): James Brooks, Ena Onishi, Isabelle R. Clark, Manuel Bohn, Shinya Yamamoto
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0238034

An evaluation of bird and bat mortality at wind turbines in the Northeastern United States
Cited by: 12
Author(s): Daniel Choi, Thomas Wittig, Bryan M. Kluever
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0239367

Mining a human transcriptome database for chemical modulators of NRF2
Cited by: 18
Author(s): John P. Rooney, Brian N. Chorley, Steven Hiemstra, Steven Wink, Xuting Wang, Douglas A. Bell, Bob van de Water, J. Christopher Corton
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0228094

Human and climatic drivers affect spatial fishing patterns in a multiple-use marine protected area: The Galapagos Marine Reserve
Cited by: 14
Author(s): Mauricio Castrejón, Anthony Charles
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0246446

Using touchscreen equipped operant chambers to study animal cognition. Benefits, limitations, and advice
Cited by: 8
Author(s): Benjamin M Seitz, Kelsey McCune, Maggie MacPherson, Luisa Bergeron, Aaron P. Blaisdell, Corina J. Logan
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pgen.1009302

UV-exposure, endogenous DNA damage, and DNA replication errors shape the spectra of genome changes in human skin
Cited by: 24
Author(s): Natalie Saini, Camille K. Giacobone, Leszek J. Klimczak, Brian N. Papas, Adam Burkholder, Jianliang Li, David C. Fargo, Re Bai, Kevin Gerrish, Cynthia L. Innes, Shepherd H. Schurman, Dmitry A. Gordenin
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pgen.1008551

Aspergillus fumigatus calcium-responsive transcription factors regulate cell wall architecture promoting stress tolerance, virulence and caspofungin resistance
Cited by: 32
Author(s): Patrícia Alves de Castro, Ana Cristina Colabardini, Adriana Oliveira Manfiolli, Jéssica Chiaratto, Lilian Pereira Silva, Eliciane Cevolani Mattos, Giuseppe Palmisano, Fausto Almeida, Gabriela Félix Persinoti, Laure Nicolas Annick Ries, Laura Mellado, Marina Campos Rocha, Michael Bromley, Roberto Nascimento Silva, Gabriel Scalini de Souza, Flávio Vieira Loures, Iran Malavazi, Neil Andrew Brown, Gustavo H. Goldman
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pmed.1003731

Menopausal hormone therapy and women’s health: An umbrella review
Cited by: 63
Author(s): Guo Qiang Zhang, Jin Liang Chen, Ying Luo, Maya B. Mathur, Panagiotis Anagnostis, Ulugbek Nurmatov, Madar Talibov, Jing Zhang, Catherine M. Hawrylowicz, Mary Ann Lumsden, Hilary Critchley, Aziz Sheikh, Bo Lundbäck, Cecilia Lässer, Hannu Kankaanranta, Siew Hwa Lee, Bright I. Nwaru
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0229687

Expanding radiogenic strontium isotope baseline data for central Mexican paleomobility studies
Cited by: 16
Author(s): Sofía I. Pacheco‐Forés, Gwyneth W. Gordon, Kelly J. Knudson
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0257829

The level of postoperative care influences mortality prediction by the POSPOM score: A retrospective cohort analysis
Cited by: 4
Author(s): Jan Menzenbach, Yannik C. Layer, Yonah L. Layer, Andreas Mayr, Mark Coburn, Maria Wittmann, Tobias Hilbert
Software Mentions: 4
Published: almost 5 years ago

10.1371/journal.pone.0230799

The SIESTA (SEAAV Integrated evaluation sedation tool for anaesthesia) project: Initial development of a multifactorial sedation assessment tool for dogs
Cited by: 11
Author(s): Fernando Martínez-Taboada, J. I. Redondo
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0228933

Transcriptomic analysis to elucidate the response of honeybees (Hymenoptera: Apidae) to amitraz treatment
Cited by: 5
Author(s): Ye Liang, Peng Liu, Tengfei Shi, Wang AnRan, Yujie Zhu, Lai Li, Linsheng Yu
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0253037

A meta-analysis of transcriptomic profiles of Huntington’s disease patients
Cited by: 14
Author(s): Manuel Seefelder, Stefan Kochanek
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0238076

Deletion of Mediator 1 suppresses TGFβ signaling leading to changes in epidermal lineages and regeneration
Cited by: 3
Author(s): Yuko Oda, Thai Nguyen, Akiko Hata, Mark B. Meyer, J. Wesley Pike, Daniel Bikle
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0225658

Highly multiplexed quantitative PCR-based platform for evaluation of chicken immune responses
Cited by: 15
Author(s): Dominika Borowska, Richard Kuo, Richard Bailey, Kellie Watson, Pete Kaiser, Lonneke Vervelde, Mark P. Stevens
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0249012

State-level prevalence estimates of latent tuberculosis infection in the United States by medical risk factors, demographic characteristics and nativity
Cited by: 7
Author(s): Ali Mirzazadeh, James G. Kahn, Maryam B. Haddad, Andrew Hill, Suzanne M. Marks, Adam Readhead, Pennan M. Barry, Jennifer Flood, Jonathan Mermin, Priya B. Shete
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0226861

Developing political-ecological theory: The need for many-task computing
Cited by: 3
Author(s): Timothy C. Haas
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0256353

Uncovering the genomic and metagenomic research potential in old ethanol-preserved snakes
Cited by: 6
Author(s): Claus M. Zacho, Martina Abenhus Bager, Ashot Margaryan, Peter Gravlund, Anders Galatius, Arne Redsted Rasmussen, Morten E. Allentoft
Software Mentions: 4
Published: almost 5 years ago

10.1371/journal.pone.0242061

List-wise learning to rank biomedical question-answer pairs with deep ranking recursive autoencoders
Cited by: 4
Author(s): Yan Yan, Bowen Zhang, Xufeng Li, Zhenhan Liu
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pgen.1009734

Recovery from heat shock requires the microRNA pathway in Caenorhabditis elegans
Cited by: 10
Author(s): Delaney C Pagliuso, Devavrat M Bodas, Amy E. Pasquinelli
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0226548

Extending the use of the World Health Organisations’ water sanitation and hygiene assessment tool for surveys in hospitals – from WASH-FIT to WASH-FAST
Cited by: 12
Author(s): Michuki Maina, Olga Tosas-Auguet, Jacob McKnight, Mathias Zosi, Grace Kimemia, Paul Mwaniki, Arabella Hayter, Margaret Montgomery, Constance Schultsz, Mike English
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0243532

Captivated by thought: “Sticky” thinking leaves traces of perceptual decoupling in task-evoked pupil size
Cited by: 3
Author(s): Stefan Huijser, Mathanja Verkaik, Marieke K. van Vugt, Niels Taatgen
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0218230

Atoh8 acts as a regulator of chondrocyte proliferation and differentiation in endochondral bones
Cited by: 10
Author(s): Nadine Schroeder, Manuela Wuelling, Daniel Hoffmann, Beate Brand‐Saberi, Andrea Vortkamp
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pone.0238071

Research data sharing in the Australian national science agency: Understanding the relative importance of organisational, disciplinary and domain-specific influences
Cited by: 4
Author(s): Claire M. Mason, Paul Box, Shanae M. Burns
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0236893

A facet atlas: Visualizing networks that describe the blends, cores, and peripheries of personality structure
Cited by: 22
Author(s): Ted Schwaba, Mijke Rhemtulla, Christopher J. Hopwood, Wiebke Bleidorn
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pgen.1008466

Paralog buffering contributes to the variable essentiality of genes in cancer cell lines
Cited by: 59
Author(s): Barbara De Kegel, Colm J. Ryan
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pgen.1009146

Crumbs and the apical spectrin cytoskeleton regulate R8 cell fate in the Drosophila eye
Cited by: 4
Author(s): Jonathan M. Pojer, Abdul Jabbar Saiful Hilmi, Shu Kondo, Ken Harvey
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0228188

Precision medicine and actionable alterations in lung cancer: A single institution experience
Cited by: 7
Author(s): Isa Mambetsariev, Yingyu Wang, Chen Chen, Sorena Nadaf, Rebecca Pharaon, Jeremy Fricke, Idoroenyi Amanam, Arya Amini, Andrea Bild, Peiguo Chu, Loretta Erhunmwunsee, Jae Kim, Janet Munu, Raju Pillai, Dan J. Raz, Sagus Sampath, Lalitkumar K. Vora, Fang Qiu, Lynette M. Smith, Surinder K. Batra, Erminia Massarelli, Marianna Koczywas, Karen L. Reckamp, Ravi Salgia
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0247378

Stool metabolome-microbiota evaluation among children and adolescents with obesity, overweight, and normal-weight using 1H NMR and 16S rRNA gene profiling
Cited by: 11
Author(s): José Diógenes Jaimes, Andrea Slavíčková, Jakub Hurych, Ondřej Cinek, Ben Nichols, Lucie Vodolánová, K. Černý, Jaroslav Havlík
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pntd.0009062

Exploring the influence of different habitats and their volatile chemistry in modulating sand fly population structure in a leishmaniasis endemic foci, Kenya
Cited by: 2
Author(s): Iman B. Hassaballa, Baldwyn Torto, Catherine L. Sole, David P. Tchouassi
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0238090

Simulation of the COVID-19 epidemic on the social network of Slovenia: Estimating the intrinsic forecast uncertainty
Cited by: 22
Author(s): Žiga Zaplotnik, Aleksandar Gavrić, Luka Medic
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pgen.1009097

Diversified regulation of circadian clock gene expression following whole genome duplication
Cited by: 9
Author(s): Alexander C. West, Marianne Iversen, Even H. Jørgensen, Simen Rød Sandve, David G. Hazlerigg, Shona H. Wood
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pntd.0009357

Mark-release-recapture of male Aedes aegypti (Diptera: Culicidae): Use of rhodamine B to estimate movement, mating and population parameters in preparation for an incompatible male program
Cited by: 10
Author(s): Brendan J Trewin, Dan Pagendam, Brian J. Johnson, Chris Paton, Nigel Snoad, Scott A. Ritchie, Kyran M. Staunton, Bradley J. White, Sara N. Mitchell, Nigel W. Beebe
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0242087

HemoDownloader: Open source software utility to extract data from HemoCue HbA1c 501 devices in epidemiological studies of diabetes mellitus
Cited by: 0
Author(s): Martin Rune Hassan Hansen, Vivi Schlünssen, Annelli Sandbæk
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0229873

Development of a methodology to make individual estimates of the precision of liquid chromatography-tandem mass spectrometry drug assay results for use in population pharmacokinetic modeling and the optimization of dosage regimens
Cited by: 7
Author(s): Gellért Balázs Karvaly, Michael Neely, K Kovács, István Vincze, Barna Vásárhelyi, Roger W. Jelliffe
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0238546

MITF and TFEB cross-regulation in melanoma cells
Cited by: 12
Author(s): Josué Ballesteros‐Álvarez, Ramile Dilshat, Valerie Fock, Katrín Möller, Ludwig Karl, Lionel Larue, Margrét H. Ögmundsdóttir, Eirı́kur Steingrı́msson
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0227189

Quantifying tourism booms and the increasing footprint in the Arctic with social media data
Cited by: 25
Author(s): Claire A. Runge, Rémi M. Daigle, Vera Helene Hausner
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pgen.1009390

Zebrafish Ski7 tunes RNA levels during the oocyte-to-embryo transition
Cited by: 11
Author(s): Luis Enrique Cabrera-Quio, Alexander Schleiffer, Karl Mechtler, Andrea Pauli
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0238066

Urinary markers of oxidative stress respond to infection and late-life in wild chimpanzees
Cited by: 16
Author(s): Nicole Thompson González, Emily Otali, Zarin Machanda, Martin N. Muller, Richard W. Wrangham, Melissa Emery Thompson
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0232144

Optimization of Hermetia illucens (L.) egg laying under different nutrition and light conditions
Cited by: 24
Author(s): Laura Ioana Macavei, G Benassi, Vlad Stoian, Lara Maistrello
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0228687

Pre-analytical error for three point of care venous blood testing platforms in acute ambulatory settings: A mixed methods service evaluation
Cited by: 3
Author(s): Thomas R Fanshawe, Margaret Glogowska, George Edwards, P Turner, Ian Smith, Rosie Steele, Caroline Croxson, John M. Bowen, Gail Hayward
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0256605

Development of strategic social information seeking: Implications for cumulative culture
Cited by: 2
Author(s): Kirsten H. Blakey, Eva Rafetseder, Mark Atkinson, Elizabeth Renner, Fía Cowan-Forsythe, Shivani J. Sati, Christine A. Caldwell
Software Mentions: 4
Published: almost 5 years ago

10.1371/journal.pone.0224521

On the development of sleep states in the first weeks of life
Cited by: 13
Author(s): Tomasz Wielek, Renata Del Giudice, Adelheid Lang, Małgorzata Wisłowska, Peter Ott, Manuel Schabus
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pone.0248374

Belief in sexism shift: Defining a new form of contemporary sexism and introducing the belief in sexism shift scale (BSS scale)
Cited by: 5
Author(s): Miriam Katharina Zehnter, Francesca Manzi, Patrick E. Shrout, Madeline E. Heilman
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0228668

Comparing acoustic and radar deterrence methods as mitigation measures to reduce human-bat impacts and conservation conflicts
Cited by: 10
Author(s): Lia R. V. Gilmour, Marc W. Holderied, S. P. C. Pickering, Gareth Jones
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pgen.1009221

Short-range template switching in great ape genomes explored using pair hidden Markov models
Cited by: 10
Author(s): Conor R Walker, Aylwyn Scally, Nicola De Maio, Nick Goldman
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0236548

Techno-functional and 3D shape analysis applied for investigating the variability of backed tools in the Late Middle Paleolithic of Central Europe
Cited by: 16
Author(s): Davide Delpiano, Thorsten Uthmeier
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pgen.1009713

Multitrait GWAS to connect disease variants and biological mechanisms
Cited by: 12
Author(s): Hanna Julienne, Vincent Laville, Zachary R. McCaw, Zihuai He, Vincent Guillemot, Carla Lasry, Andrey Ziyatdinov, Cyril Nerin, Amaury Vaysse, Pierre Lechat, Hervé Ménager, Wilfried Le Goff, Marie‐Pierre Dubé, Peter Kraft, Iuliana Ionita‐Laza, Bjarni J. Vilhjálmsson, Hugues Aschard
Software Mentions: 4
Published: almost 5 years ago

10.1371/journal.pone.0254852

Ward-level factors associated with methicillin-resistant Staphylococcus aureus acquisition–an electronic medical records study in Singapore
Cited by: 2
Author(s): Zaw Tun, Dale Fisher, Sharon Salmon, Clarence C. Tam
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0237277

Causal graph analysis of COVID-19 observational data in German districts reveals effects of determining factors on reported case numbers
Cited by: 14
Author(s): Edgar Steiger, Tobias Mussgnug, Lars Eric Kroll
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0231510

Analyses of cancer incidence and other morbidities in gamma irradiated B6CF1 mice
Cited by: 7
Author(s): Alia Zander, Tatjana Paunesku, Gayle E. Woloschak
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0230254

Forecasting severe grape downy mildew attacks using machine learning
Cited by: 26
Author(s): Mathilde Chen, François Brun, M. Raynal, David Makowski
Software Mentions: 4
Published: over 6 years ago