10.1371/journal.pcbi.1009410

FiCoS: A fine-grained and coarse-grained GPU-powered deterministic simulator for biochemical networks
Cited by: 1
Author(s): Andrea Tangherloni, Marco S. Nobile, Paolo Cazzaniga, Giulia Capitoli, Simone Spolaor, Leonardo Rundo, Giancarlo Mauri, Daniela Besozzi
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0225795

Parametric CAD modeling for open source scientific hardware: Comparing OpenSCAD and FreeCAD Python scripts
Cited by: 20
Author(s): Felipe Machado, Norberto Malpica, Susana Borromeo
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0229537

Combined analysis of microbial metagenomic and metatranscriptomic sequencing data to assess in situ physiological conditions in the premature infant gut
Cited by: 8
Author(s): Yonatan Sher, Matthew R. Olm, Tali Raveh-Sadka, Christopher T. Brown, Ruth Sher, Brian Firek, Robyn Baker, Michael J. Morowitz, Jillian F. Banfield
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0247661

Cancer cluster among small village residents near the fertilizer plant in Korea
Cited by: 5
Author(s): Heung Bin Lim, Yong-Han Lee, Sanghyuk Bae, Dohyun Koh, Minjoong Yoon, Boeun Lee, Jeong-Soo Kim, Ho-Jang Kwon
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0251252

Measuring and explaining inequality of continuous care for people living with HIV receiving antiretroviral therapy in Kunming, China
Cited by: 4
Author(s): Yongmei Jin, Sawitri Assanangkornchai, Yingrong Du, Jun Li, Jingsong Bai, Yongrui Yang
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0247381

Autologous skeletal myoblast patch implantation prevents the deterioration of myocardial ischemia and right heart dysfunction in a pressure-overloaded right heart porcine model
Cited by: 3
Author(s): Kazuhiro Araki, Shigeru Miyagawa, Takuji Kawamura, Ryo Ishii, Tadashi Watabe, Akira Harada, Masaki Terabe, Köichi Toda, Toru Kuratani, Takayoshi Ueno, Yoshiki Sawa
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0252891

Implementing psychological first aid ontology
Cited by: 0
Author(s): Hyun-Ok Jung, Seung-Woo Han
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1007990

Using information theory to optimise epidemic models for real-time prediction and estimation
Cited by: 40
Author(s): Kris V Parag, Christl A. Donnelly
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0256611

Postoperative analgesic effects of paravertebral block versus erector spinae plane block for thoracic and breast surgery: A meta-analysis
Cited by: 21
Author(s): Chang Xiong, Chengpeng Han, Dong Zhao, Wenyong Peng, Duojia Xu, Zhijian Lan
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0250046

Six-month follow-up of minimally invasive nerve-sparing complete excision of endometriosis: What about dyspareunia?
Cited by: 3
Author(s): C.P. Crispi, Bruna Rafaela Santos de Oliveira, Nilton de Nadai Filho, Fernando Maia Peixoto‐Filho, Márlon de Freitas Fonseca
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0241875

Symptoms and symptom clusters associated with SARS-CoV-2 infection in community-based populations: Results from a statewide epidemiological study
Cited by: 45
Author(s): Brian E. Dixon, Kara Wools‐Kaloustian, William F. Fadel, Thomas J Duszynski, Constantin T. Yiannoutsos, Paul K. Halverson, Nir Menachemi
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0231977

Reduced cellular binding affinity has profoundly different impacts on the spread of distinct poxviruses
Cited by: 4
Author(s): Erica B. Flores, Mee Y. Bartee, Eric Bartee
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0250015

Simple discrete-time self-exciting models can describe complex dynamic processes: A case study of COVID-19
Cited by: 11
Author(s): Raiha Browning, Déborah Sulem, Kerrie Mengersen, Vincent Rivoirard, Judith Rousseau
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0241945

Earthworm distributions are not driven by measurable soil properties. Do they really indicate soil quality?
Cited by: 9
Author(s): Mark E. Hodson, Ron Corstanjeb, David T. Jones, Jo Witton, Victoria J. Burton, Tom Sloan, Paul Eggleton
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0229468

Triploidy in zebrafish larvae: Effects on gene expression, cell size and cell number, growth, development and swimming performance
Cited by: 12
Author(s): Iris L. E. van de Pol, G. Flik, Wilco C. E. P. Verberk
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0221521

Prediction of cardiovascular disease risk among people with severe mental illness: A cohort study
Cited by: 36
Author(s): Ruth Cunningham, Katrina Poppe, Debbie Peterson, Susanna Every‐Palmer, Ian Soosay, Rod Jackson
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0251296

Launching a saliva-based SARS-CoV-2 surveillance testing program on a university campus
Cited by: 14
Author(s): Alexander J. Ehrenberg, Erica A. Moehle, Cara E. Brook, Andrew H. Doudna Cate, Lea B. Witkowsky, Rohan Sachdeva, Ariana Hirsh, Kerrie Barry, Jennifer Hamilton, Enrique Lin-Shiao, Shana L. McDevitt, Luis E. Valentin-Alvarado, Kaitlyn N. Letourneau, Lauren A. Hunter, Amanda Keller, Kathleen Pestal, Phillip A. Frankino, Andrew Murley, Divya Nandakumar, Elizabeth C. Stahl, Connor A. Tsuchida, Holly K. Gildea, Andrew G. Murdock, Megan L. Hochstrasser, Elizabeth O’Brien, Alison Ciling, Alexandra Tsitsiklis, Kurtresha Worden, Claire Dugast-Darzacq, Stephanie G. Hays, Colin Barber, Riley McGarrigle, Emily Kai Yee Lam, David C. Ensminger, Lucie Bardet, Carolyn Sherry, Anna Harte, Guy Nicolette, Petros Giannikopoulos, Dirk Hockemeyer, Maya Petersen, Fyodor D. Urnov, Bradley R. Ringeisen, Mike Boots, Jennifer A. Doudna
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0253217

Bayesian neural networks for stock price forecasting before and during COVID-19 pandemic
Cited by: 16
Author(s): Rohitash Chandra, Yixuan He
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0234072

Use of a mechanistic growth model in evaluating post-restoration habitat quality for juvenile salmonids
Cited by: 2
Author(s): Carlos M. Polivka, Joseph R. Mihaljevic, Greg Dwyer
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0242973

MRI-based anatomical characterisation of lower-limb muscles in older women
Cited by: 9
Author(s): Erica Montefiori, Barbara M. Kalkman, William H Henson, Margaret Paggiosi, Eugène McCloskey, Claudia Mazzà
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0243502

An online survey of informal caregivers’ unmet needs and associated factors
Cited by: 19
Author(s): Alexandra M. J. Denham, Olivia Wynne, Amanda Baker, Neil Spratt, Alyna Turner, Parker Magin, Kerrin Palazzi, Billie Bonevski
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pmed.1003700

Adipose tissue biomarkers and type 2 diabetes incidence in normoglycemic participants in the MESArthritis Ancillary Study: A cohort study
Cited by: 2
Author(s): Farhad Pishgar, Mahsima Shabani, Thiago Quinaglia A C Silva, David A. Bluemke, Matthew J. Budoff, R. Graham Barr, Matthew Allison, Alain G. Bertoni, Wendy S. Post, João A.C. Lima, Shadpour Demehri
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0237358

Correlations of amide proton transfer-weighted MRI of cerebral infarction with clinico-radiological findings
Cited by: 9
Author(s): Daichi Momosaka, Osamu Togao, Kazufumi Kikuchi, Yoshitomo Kikuchi, Yoshinobu Wakisaka, Akio Hiwatashi
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0235566

Induction of fatigue-like behavior by pelvic irradiation of male mice alters cognitive behaviors and BDNF expression
Cited by: 4
Author(s): Brian S. Wolff, Sumiyya Raheem, Sarah Alshawi, Jeniece Regan, Linyin Feng, Leorey N. Saligan
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0227708

Fragmentation and low density as major conservation challenges for the southernmost populations of the European wildcat
Cited by: 21
Author(s): José María Gil‐Sánchez, José Miguel Barea‐Azcón, Javier Tamayo Jaramillo, F. Javier Herrera-Sánchez, José Jímenez, Emílio Virgós
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0223932

Evaluation of bacterial proliferation with a microfluidic-based device: Antibiochip
Cited by: 0
Author(s): Valentina Gallo, Alessia Ruiba, Massimo Zanin, Paolo Begnamino, S. Ledda, Tiziana Pesce, Giovanni Melioli, M. Pizzi
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0258158

Inner hair cell dysfunction in Klhl18 mutant mice leads to low frequency progressive hearing loss
Cited by: 5
Author(s): Neil J. Ingham, Navid Banafshe, Clarisse Panganiban, Julia L. Crunden, Jing Chen, Morag A. Lewis, Karen P. Steel
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0221669

Cholinergic-like neurons carrying PSEN1 E280A mutation from familial Alzheimer’s disease reveal intraneuronal sAPPβ fragments accumulation, hyperphosphorylation of TAU, oxidative stress, apoptosis and Ca2+ dysregulation: Therapeutic implications
Cited by: 16
Author(s): Viviana Soto-Mercado, Miguel Mendivil-Perez, Carlos Vélez-Pardo, Francisco Lopera, Marlene Jiménez-Del-Río
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0257864

Individual differences in thinking style and dealing with contradiction: The mediating role of mixed emotions
Cited by: 6
Author(s): David Santos, Blanca Requero, Manuel Martín-Fernández
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0220753

Arbovirus vectors of epidemiological concern in the Americas: A scoping review of entomological studies on Zika, dengue and chikungunya virus vectors
Cited by: 43
Author(s): Reilly Jones, Manisha A. Kulkarni, Thomas M. V. Davidson, Benoit Talbot
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0233244

Multimodal principal component analysis to identify major features of white matter structure and links to reading
Cited by: 31
Author(s): Bryce L. Geeraert, Maxime Chamberland, R. Marc Lebel, Catherine Lebel
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0239991

Cats shedding pathogenic Leptospira spp.—An underestimated zoonotic risk?
Cited by: 11
Author(s): Roswitha Dorsch, Javier Ojeda, Miguel Salgado, Gustavo Monti, Bernadita Collado, Camillo Tomckowiack, Carlos Tejeda, Ananda Müller, Theo Eberhard, H. L. B. M. Klaasen, Katrin Hartmann
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0238771

What do Brazilian owners know about canine obesity and what risks does this knowledge generate?
Cited by: 2
Author(s): Mariana Yukari Hayasaki Porsani, Vinicius Vasques de Oliveira, Ariane Galdino de Oliveira, Fernando Ribeiro Teixeira, Vivian Pedrinelli, Camila Marinelli Martins, Alexander J. German, Márcio Antônio Brunetto
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0256158

Cohort profile: Epigenetics in Pregnancy (EPIPREG) – population-based sample of European and South Asian pregnant women with epigenome-wide DNA methylation (850k) in peripheral blood leukocytes
Cited by: 7
Author(s): Nicolás Fragoso-Bargas, Julia O Opsahl, Nadezhda Kiryushchenko, Yvonne Böttcher, Sindre Lee, Elisabeth Qvigstad, Kåre Rønn Richardsen, Christin W. Waage, Line Sletner, Anne Karen Jenum, Rashmi B. Prasad, Leif Groop, Gunn-Helen Moen, Kåre I. Birkeland, Christine Sommer
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0232849

Sequence-structure-function relationships in class I MHC: A local frustration perspective
Cited by: 17
Author(s): Onur Serçinoğlu, Pemra Ozbek
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0242643

Soil microbial community responses to short-term nitrogen addition in China’s Horqin Sandy Land
Cited by: 4
Author(s): Yayi Niu, Yucong Duan, Yuqiang Li, Xuyang Wang, Yun Chen, Lilong Wang
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0244763

Modeling dysbiosis of human NASH in mice: Loss of gut microbiome diversity and overgrowth of Erysipelotrichales
Cited by: 24
Author(s): James K. Carter, Dipankar Bhattacharya, Joshua N. Borgerding, Maria Isabel Fiel, Jeremiah J. Faith, Scott L. Friedman
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0232786

Dynamics of IgM and IgG responses to the next generation of engineered Duffy binding protein II immunogen: Strain-specific and strain-transcending immune responses over a nine-year period
Cited by: 7
Author(s): Camila Maia Pantuzzo Medeiros, Eduardo U. M. Moreira, Camilla Valente Pires, Letícia M. Torres, Luiz Felipe Ferreira Guimarães, Jéssica R. S. Alves, Bárbara A. S. Lima, Cor Jésus Fernandes Fontes, Helena L. Costa, Cristiana Ferreira Alves de Brito, Taís Nóbrega de Sousa, Francis B. Ntumngia, John H. Adams, Flora Satiko Kano, Luzia H. Carvalho
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0240898

Chest computed tomography outcomes in a randomized clinical trial in cystic fibrosis: Lessons learned from the first ataluren phase 3 study
Cited by: 12
Author(s): Harm A.W.M. Tiddens, Eleni‐Rosalina Andrinopoulou, Joe K. McIntosh, J.S. Elborn, Eitan Kerem, N. Bouma, J. Bosch, Mariette Kemner-van de Corput
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0243030

Design deep neural network architecture using a genetic algorithm for estimation of pile bearing capacity
Cited by: 41
Author(s): Tuan Anh Pham, Van Quan Tran, Huong-Lan Thi Vu, Haï‐Bang Ly
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0236832

Early detection of internet trolls: Introducing an algorithm based on word pairs / single words multiple repetition ratio
Cited by: 11
Author(s): Sergei Monakhov
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0220870

A new method for identifying a fault in T-connected lines based on multiscale S-transform energy entropy and an extreme learning machine
Cited by: 3
Author(s): Hao Wu, Jie Yang, Leilei Chen, Qiaomei Wang
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pcbi.1008240

PhyDOSE: Design of follow-up single-cell sequencing experiments of tumors
Cited by: 2
Author(s): Leah L. Weber, Nuraini Aguse, Nicholas Chia, Mohammed El-Kebir
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0251944

Quality of life in people living with HIV-associated neurocognitive disorder: A scoping review study
Cited by: 16
Author(s): Kate Alford, Stephanie Daley, Sube Banerjee, Jaime H. Vera
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0229932

Metacognition across domains: Is the association between arithmetic and metacognitive monitoring domain-specific?
Cited by: 16
Author(s): Erwin Bellon, Wim Fias, Bert De Smedt
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0241408

Six years of measuring patient experiences in Belgium: Limited improvement and lack of association with improvement strategies
Cited by: 3
Author(s): Astrid Van Wilder, Kris Vanhaecht, Dirk De Ridder, Bianca Cox, Jonas Brouwers, Fien Claessens, Dirk De Wachter, Svin Deneckere, Dirk Ramaekers, Else Tambuyzer, Ilse Weeghmans, Luk Bruyneel
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0227040

Variance based weighting of multisensory head rotation signals for verticality perception
Cited by: 3
Author(s): Christopher J. Dakin, Prateek Kumar, Patrick A. Forbes, Amy Peters, Brian L. Day
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0252350

Afraid of the dark: Light acutely suppresses activity in the human amygdala
Cited by: 12
Author(s): Elise M. McGlashan, Govinda Poudel, Sharna Jamadar, Andrew J. K. Phillips, Sean W. Cain
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pmed.1003219

Polygenic risk score for obesity and the quality, quantity, and timing of workplace food purchases: A secondary analysis from the ChooseWell 365 randomized trial
Cited by: 14
Author(s): Hassan S. Dashti, Marie‐France Hivert, Douglas E. Levy, Jessica L. McCurley, Richa Saxena, Anne N. Thorndike
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0240033

Youth friendly sexual and reproductive health service utilization among high and preparatory school students in Debre Tabor town, Northwest Ethiopia: A cross sectional study
Cited by: 14
Author(s): Amare Simegn, Telake Azale, Abebaw Addis, Mulugeta Dile Worke, Yitayal Ayalew, Biniam Minuye
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0231694

The determinants of handwashing behaviour among internally displaced women in two camps in the Kurdistan Region of Iraq
Cited by: 12
Author(s): Aso Zangana, Nazar P. Shabila, Tom Heath, Sian White
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0243839

Gamma distribution model of diffusion MRI for the differentiation of primary central nerve system lymphomas and glioblastomas
Cited by: 2
Author(s): Osamu Togao, Toru Chikui, Kenji Tokumori, Yukiko Kami, Kazufumi Kikuchi, Daichi Momosaka, Yoshitomo Kikuchi, Daisuke Kuga, Nobuhiro Hata, Masahiro Mizoguchi, Koji Iihara, Akio Hiwatashi
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0244707

Coronary calcium scoring assessed on native screening chest CT imaging as predictor for outcome in COVID-19: An analysis of a hospitalized German cohort
Cited by: 17
Author(s): G. Zimmermann, Alexander A. Fingerle, Christina Müller-Leisse, Felix G. Gassert, Claudio E. von Schacky, Tareq Ibrahim, Karl‐Ludwig Laugwitz, Fabian Geisler, Christoph D. Spinner, Bernhard Haller, Moritz Makowski, Jonathan Nadjiri
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0248384

Don’t put all social network sites in one basket: Facebook, Instagram, Twitter, TikTok, and their relations with well-being during the COVID-19 pandemic
Cited by: 69
Author(s): Alexandra Masciantonio, David Bourguignon, Pierre Bouchat, Manon Balty, Bernard Rimé
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0226281

A network-centric approach for estimating trust between open source software developers
Cited by: 7
Author(s): Hitesh Sapkota, Pradeep K. Murukannaiah, Yi Wang
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0253490

Do you have COVID-19? How to increase the use of diagnostic and contact tracing apps
Cited by: 1
Author(s): Déborah Martínez, Cristina Parilli, Ana María Viteri Rojas, Carlos Scartascini, Alberto Simpser
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0228856

Risk factors for obstructed labour in Eastern Uganda: A case control study
Cited by: 16
Author(s): Milton W. Musaba, Grace Ndeezi, Justus K. Barageine, Andrew Weeks, Victoria Nankabirwa, Felix Wamono, Daniel Semakula, James K Tumwine, Julius Wandabwa
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0231503

Whole genome sequencing characterization of Slovenian carbapenem-resistant Klebsiella pneumoniae, including OXA-48 and NDM-1 producing outbreak isolates
Cited by: 7
Author(s): Katarina Benulič, Mateja Pirš, Natacha Couto, Monika A. Chlebowicz, John W. A. Rossen, Tomaž Mark Zorec, Katja Seme, Mario Poljak, Tatjana Lejko Zupanc, Eva Ružić‐Sabljić, Tjaša Cerar
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0226122

Event timing in human vision: Modulating factors and independent functions
Cited by: 3
Author(s): Valtteri Arstila, Alexandra L. Georgescu, Henri Pesonen, Daniel Lunn, Valdas Noreika, Christine M. Falter‐Wagner
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pmed.1003692

Development and validation of the CHIME simulation model to assess lifetime health outcomes of prediabetes and type 2 diabetes in Chinese populations: A modeling study
Cited by: 8
Author(s): Jianchao Quan, Carmen S. Ng, Harley H.Y. Kwok, Adary Zhang, Yuet Hin Yuen, Cheung-Hei Choi, SC Siu, Simon Y.H. Tang, Nelson M.S. Wat, Jean Woo, Karen Eggleston, Gabriel M. Leung
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0248104

Repetitive in vivo manual loading of the spine elicits cellular responses in porcine annuli fibrosi
Cited by: 1
Author(s): John R. Matyas, Claudia Klein, Dragana Ponjevic, Neil A. Duncan, Gregory N. Kawchuk
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1009195

Wing structure and neural encoding jointly determine sensing strategies in insect flight
Cited by: 4
Author(s): Alison I. Weber, Thomas L. Daniel, Bingni W. Brunton
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1007922

All-atom simulation of the HET-s prion replication
Cited by: 8
Author(s): Luca Terruzzi, Giovanni Spagnolli, Alberto Boldrini, Jesús R. Requena, Emiliano Biasini, Pietro Faccioli
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0248803

Isotopic evidence for geographic heterogeneity in Ancient Greek military forces
Cited by: 7
Author(s): Katherine L Reinberger, Laurie J Reitsema, Britney Kyle, Stefano Vassallo, George D. Kamenov, John Krigbaum
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pmed.1003370

Quantifying Plasmodium falciparum infections clustering within households to inform household-based intervention strategies for malaria control programs: An observational study and meta-analysis from 41 malaria-endemic countries
Cited by: 17
Author(s): Gillian Stresman, Charles Whittaker, Hannah Slater, Teun Bousema, Jackie Cook
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0233863

Phosphorylation of mouse intestinal basolateral amino acid uniporter LAT4 is controlled by food-entrained diurnal rhythm and dietary proteins
Cited by: 5
Author(s): Lalita Oparija-Rogenmozere, Anuradha Rajendran, Nadège Poncet, Simone M. R. Camargo, François Verrey
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0238750

Corneal dysfunction precedes the onset of hyperglycemia in a mouse model of diet-induced obesity
Cited by: 15
Author(s): Aubrey Hargrave, Justin Courson, Vanna Pham, Paul Landry, Sri Magadi, Pooja Shankar, Sam Hanlon, Apoorva Das, Rolando E. Rumbaut, C. Wayne Smith, Alan R. Burns
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0228739

Affect and exertion during incremental physical exercise: Examining changes using automated facial action analysis and experiential self-report
Cited by: 19
Author(s): Sinika Timme, Ralf Brand
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0248955

Firearms and violence in Europe–A systematic review
Cited by: 7
Author(s): Katharina Krüsselmann, Pauline Aarten, Marieke Liem
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0251910

Unraveling the unbinding pathways of SARS-CoV-2 Papain-like proteinase known inhibitors by Supervised Molecular Dynamics simulation
Cited by: 9
Author(s): Farzin Sohraby, Hassan Aryapour
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0257554

Effect of stimulus orientation and intensity on short-interval intracortical inhibition (SICI) and facilitation (SICF): A multi-channel transcranial magnetic stimulation study
Cited by: 7
Author(s): Sergei Tugin, Victor H. Souza, Maria Nazarova, Павел Новиков, Anne Tervo, Jaakko O. Nieminen, Pantelis Lioumis, Ulf Ziemann, Vadim V. Nikulin, Risto J. Ilmoniemi
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pcbi.1008847

Avoiding the bullies: The resilience of cooperation among unequals
Cited by: 1
Author(s): Michael Foley, Rory Smead, Patrick Forber, Christoph Riedl
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0246300

Running behaviors, motivations, and injury risk during the COVID-19 pandemic: A survey of 1147 runners
Cited by: 34
Author(s): Alexandra F. DeJong Lempke, Pamela N. Fish, Jay Hertel
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0243215

Supportive consensus
Cited by: 1
Author(s): Alberto Palomares, Miguel Rebollo, Carlos Carrascosa
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pmed.1003760

Regional differences in short stature in England between 2006 and 2019: A cross-sectional analysis from the National Child Measurement Programme
Cited by: 8
Author(s): Joanna Orr, Joseph Freer, Joan K. Morris, Caroline Hancock, Robert Walton, Leo Dunkel, Helen L Storr, Andrew J. Prendergast
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pcbi.1009413

Hybrid computational modeling demonstrates the utility of simulating complex cellular networks in type 1 diabetes
Cited by: 0
Author(s): Zhenzhen Shi, Y. Li, Majid Jaberi-Douraki
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0248514

Association between childhood maltreatment, psychopathology and DNA methylation of genes involved in stress regulation: Evidence from a study in Borderline Personality Disorder
Cited by: 5
Author(s): Vera Flasbeck, Martin Brüne
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0242432

Accessing habitat suitability and connectivity for the westernmost population of Asian black bear (Ursus thibetanus gedrosianus, Blanford, 1877) based on climate changes scenarios in Iran
Cited by: 14
Author(s): Maryam Morovati, Peyman Karami, Fatemeh Bahadori Amjas
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0249196

Deep learning classification of lipid droplets in quantitative phase images
Cited by: 10
Author(s): Luke Sheneman, Gregory Stephanopoulos, Andreas E. Vasdekis
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0257971

Identification of pathogenic Leptospira species and serovars in New Zealand using metabarcoding
Cited by: 11
Author(s): David A. Wilkinson, Matthew Edwards, Jackie Benschop, Shahista Nisa
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0247022

Brownian dynamics simulation of protofilament relaxation during rapid freezing
Cited by: 3
Author(s): Evgeniy V. Ulyanov, D. S. Vinogradov, J. Richard McIntosh, Nikita Gudimchuk
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1009248

Computational Eurotransplant kidney allocation simulations demonstrate the feasibility and benefit of T-cell epitope matching
Cited by: 6
Author(s): Matthias Niemann, Nils Lachmann, Kirsten Geneugelijk, Eric Spierings
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0223339

In vivo clearance of nanoparticles by transcytosis across alveolar epithelial cells
Cited by: 21
Author(s): Pascal Detampel, Anutosh Ganguly, Sara Tehranian, Francis Green, Santiswarup Singha, Pere Santamaría, Ayodeji Jeje, Clifford S. Cho, Björn Petri, Matthias Amrein
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0230904

Binary-level data dependence analysis of hot execution regions using abstract interpretation at runtime
Cited by: 0
Author(s): Rasha Omar, Mostafa M. Abbas, Ahmed El-Mahdy, Erven Rohou
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0226863

In Situ Processing and Efficient Environmental Detection (iSPEED) of tree pests and pathogens using point-of-use real-time PCR
Cited by: 15
Author(s): Arnaud Capron, Don Stewart, Kelly Hrywkiw, Kiah Allen, Nicolas Feau, Guillaume J. Bilodeau, Philippe Tanguay, Michel Cusson, Richard Hamelin
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0251685

A systematic review to identify research priority setting in Black and minority ethnic health and evaluate their processes
Cited by: 13
Author(s): Halima Iqbal, Jane West, Melanie Haith‐Cooper, Rosemary McEachan
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0238844

Antenatal and postpartum prevention of Rh alloimmunization: A systematic review and GRADE analysis
Cited by: 1
Author(s): Candyce Hamel, Leila Esmaeilisaraji, Micere Thuku, Alan Michaud, Lindsey Sikora, Karen Fung-Kee-Fung
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0237884

The role of disulfide bonds in a Solanum tuberosum saposin-like protein investigated using molecular dynamics
Cited by: 1
Author(s): John H. Dupuis, Shenlin Wang, Chen Song, Rickey Y. Yada
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0230822

Characterization of the fungal community in the canopy air of the invasive plant Ageratina adenophora and its potential to cause plant diseases
Cited by: 7
Author(s): Chinho Lin, Kai Fang, Xing-Fan Dong, Ai-Ling Yang, Yuxuan Li, Hanbo Zhang
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0253415

Unsupervised multi-source domain adaptation with no observable source data
Cited by: 2
Author(s): Heung Bae Jeon, Seongmin Lee, Un-Gu Kang
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0248456

The time to peak blood bicarbonate (HCO3–), pH, and the strong ion difference (SID) following sodium bicarbonate (NaHCO3) ingestion in highly trained adolescent swimmers
Cited by: 2
Author(s): Josh W. Newbury, Matthew Cole, Adam L. Kelly, Richard J Chessor, Albert K. Sparks, Lars R. McNaughton, Lewis A. Gough
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0241702

Prevalence and associated factors of premenstrual syndrome among women of the reproductive age group in Ethiopia: Systematic review and meta-analysis
Cited by: 19
Author(s): Teshome Gensa Geta, Gashaw Garedew Woldeamanuel, Tamirat Tesfaye Dassa
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0256526

Out-of-hospital cardiac arrest and ambient air pollution: A dose-effect relationship and an association with OHCA incidence
Cited by: 10
Author(s): Francesca Romana Gentile, Roberto Primi, Enrico Baldi, Sara Compagnoni, Claudio Mare, Enrico Contri, Francesca Reali, Daniele Bussi, Fabio Facchin, Alessia Currao, Sara Bendotti, Simone Savastano, Lombardia CARe researchers
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pcbi.1007766

Kilohertz waveforms optimized to produce closed-state Na+ channel inactivation eliminate onset response in nerve conduction block
Cited by: 12
Author(s): Guosheng Yi, Warren M. Grill
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0246659

Differential impacts of freshwater and marine covariates on wild and hatchery Chinook salmon marine survival
Cited by: 8
Author(s): Brandon E. Chasco, Brian J. Burke, Lisa G. Crozier, Rich Zabel
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0249040

Prognostic and clinicopathological significance of GPRC5A in various cancers: A systematic review and meta-analysis
Cited by: 1
Author(s): Lu Dai, Xiao Jin, Zheng Liu
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0256211

Emotional arousal in 2D versus 3D virtual reality environments
Cited by: 26
Author(s): Feng Tian, Minlei Hua, Wenrui Zhang, Yingjie Li, Xiaoli Yang
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0243718

Prevalence and correlates of prescription drug diversion and misuse among people living with HIV in the eThekwini district, KwaZulu-Natal, South Africa
Cited by: 4
Author(s): Buyisile Chibi, Nonhlanhla Yende‐Zuma, Tivani P. Mashamba-Thompson
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0251801

Natural plant products as potential inhibitors of RNA dependent RNA polymerase of Severe Acute Respiratory Syndrome Coronavirus-2
Cited by: 22
Author(s): Shruti Koulgi, Vinod Jani, Mallikarjunachari Uppuladinne V N, Uddhavesh Sonavane, Rajendra Joshi
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0248753

Reporting health services research to a broader public: An exploration of inconsistencies and reporting inadequacies in societal publications
Cited by: 1
Author(s): Reinie G. Gerrits, Michael J. Berg, Anton E. Kunst, Niek Klazinga, Dionne Kringos
Software Mentions: 2
Published: over 5 years ago