10.1371/journal.pcbi.1008057

Temperature-robust activity patterns arise from coordinated axonal Sodium channel properties
Cited by: 7
Author(s): Margaret DeMaegd, Wolfgang Stein
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pcbi.1007673

DeLTA: Automated cell segmentation, tracking, and lineage reconstruction using deep learning
Cited by: 125
Author(s): Jean-Baptiste Lugagne, Haonan Lin, Mary J. Dunlop
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0236310

Data-driven study of the COVID-19 pandemic via age-structured modelling and prediction of the health system failure in Brazil amid diverse intervention strategies
Cited by: 23
Author(s): Askery Canabarro, Elayne Tenório, Renato Martins, Laís Bhering Martins, Samuraí Brito, Rafael Chaves
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0236703

Epidemiology and associated microbiota changes in deployed military personnel at high risk of traveler's diarrhea
Cited by: 20
Author(s): William A. Walters, Faviola Reyes, Giselle Soto, Nathanael D. Reynolds, Jamie Fraser, Ricardo Avilés, David R. Tribble, Adam P. Irvin, Nancy Kelley‐Loughnane, Ramiro L. Gutiérrez, Mark S. Riddle, Ruth E. Ley, Michael S. Goodson, Mark P. Simons
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0238068

Evaluation of Newcastle Disease antibody titers in backyard poultry in Germany with a vaccination interval of twelve weeks
Cited by: 4
Author(s): Björn Oberländer, Klaus Failing, Celina M. Jüngst, Nicole Neuhaus, Michael Lierz, Franca Möller Palau-Ribes
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0247318

Predicting the effects of reservoir water level management on the reproductive output of a riparian songbird
Cited by: 0
Author(s): Mathew Hepp, Eiríkur Pálsson, Sarah K. Thomsen, David J. Green
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1008400

Reconstructing tumor evolutionary histories and clone trees in polynomial-time with SubMARine
Cited by: 5
Author(s): Linda K. Sundermann, Jeff Wintersinger, Gunnar Rätsch, Jens Stoye, Quaid Morris
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1007646

Providing new insights on the biphasic lifestyle of the predatory bacterium Bdellovibrio bacteriovorus through genome-scale metabolic modeling
Cited by: 8
Author(s): Cristina Herencias, S. Salgado-Briegas, María Auxiliadora Prieto, Juan Nogales
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pmed.1003029

Digitally enabled aged care and neurological rehabilitation to enhance outcomes with Activity and MObility UsiNg Technology (AMOUNT) in Australia: A randomised controlled trial
Cited by: 22
Author(s): Leanne Hassett, Maayken van den Berg, Richard I. Lindley, Maria Crotty, Annie McCluskey, Hidde P. van der Ploeg, Susan L. Smith, Karl Schurr, Kirsten Howard, Maree L. Hackett, Maggie Killington, Bert Bongers, Leanne Togher, Daniel Treacy, Simone Dorsch, Siobhan Wong, Katharine Scrivener, Sakina Chagpar, Heather Weber, Marina B. Pinheiro, Stéphane Héritier, Catherine Sherrington
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0229694

Five-year follow-up of fundus autofluorescence and retinal sensitivity in the fellow eye in exudative age-related macular degeneration in Japan
Cited by: 2
Author(s): Ari Shinojima, Miki Sawa, Ryusaburo Mori, Tetsuju Sekiryu, Yuji Oshima, Aki Kato, Chikako Hara, Masaaki Saito, Yukinori Sugano, Masayuki Ashikari, Yoshio Hirano, Hitomi Asato, Mayumi Nakamura, Kiyoshi Matsuno, Noriyuki Kuno, Erika Kimura, Takeshi Nishiyama, Mitsuko Yuzawa, Tatsuro Ishibashi, Yuichiro Ogura, Tomohiro Iida, Fumi Gomi, Tsutomu Yasukawa
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pmed.1003337

The prevalence of mental illness in refugees and asylum seekers: A systematic review and meta-analysis
Cited by: 270
Author(s): Rebecca Blackmore, Jacqueline Boyle, Mina Fazel, Sanjeeva Ranasinha, Kylie Megan Gray, Grace Fitzgerald, Marie Misso, Melanie Gibson-Helm
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pcbi.1009306

The impact of local assembly rules on RNA packaging in a T = 1 satellite plant virus
Cited by: 4
Author(s): Sam R. Hill, Reidun Twarock, Eric C. Dykeman
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pmed.1003220

Changes in the amount of nutrient of packaged foods and beverages after the initial implementation of the Chilean Law of Food Labelling and Advertising: A nonexperimental prospective study
Cited by: 104
Author(s): Marcela Reyes, Lindsey Smith Taillie, Barry M. Popkin, Rebecca Kanter, Stefanie Vandevijvere, Camila Corvalán
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0242605

Characterization of binding between model protein GA-Z and human serum albumin using asymmetrical flow field-flow fractionation and small angle X-ray scattering
Cited by: 4
Author(s): Jun Kyun Choi, Marie Wahlgren, Vilhelm Ek, Ulla Elofsson, Jonas Fransson, Lars Nilsson, Ann E. Terry, Christopher Söderberg
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0255092

Inhibition of acetic acid-induced colitis in rats by new Pediococcus acidilactici strains, vitamin producers recovered from human gut microbiota
Cited by: 1
Author(s): Nabil Mansour, Wagiha S. Elkalla, Yasser Ragab, Mohamed Ramadan
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0255318

Associations between self-efficacy, distress and anxiety in cancer patient-relative dyads visiting psychosocial cancer support services: Using actor-partner interdependence modelling
Cited by: 3
Author(s): Solveigh P. Lingens, Florian Schulz, Isabell Müller, Holger Schulz, Christiane Bleich
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pcbi.1007608

Machine learning with random subspace ensembles identifies antimicrobial resistance determinants from pan-genomes of three pathogens
Cited by: 44
Author(s): Jason C. Hyun, Erol Kavvas, Jonathan M. Monk, Jaehyung Kim
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pcbi.1007486

Accuracy of real-time multi-model ensemble forecasts for seasonal influenza in the U.S.
Cited by: 106
Author(s): Nicholas G. Reich, Craig McGowan, Teresa K. Yamana, Abhinav Tushar, Evan L. Ray, Dave Osthus, Sasikiran Kandula, Logan Brooks, Willow Crawford-Crudell, Graham Casey Gibson, Evan Moore, Rebecca Silva, Matthew Biggerstaff, Michael A. Johansson, Roni Rosenfeld, Jeffrey Shaman
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pmed.1003481

Mindfulness-based programmes for mental health promotion in adults in nonclinical settings: A systematic review and meta-analysis of randomised controlled trials
Cited by: 100
Author(s): Julieta Galante, Claire Friedrich, Anna F Dawson, Marta Modrego‐Alarcón, Pia Gebbing, Irene Delgado-Suárez, Radhika Gupta, Lydia Dean, Tim Dalgleish, Ian R. White, Peter B. Jones
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0239824

Meta-analysis of whole-exome sequencing data from two independent cohorts finds no evidence for rare variant enrichment in Parkinson disease associated loci
Cited by: 10
Author(s): Johannes Jernqvist Gaare, Gonzalo S. Nido, Christian Dölle, Paweł Sztromwasser, Guido Alves, Ole‐Bjørn Tysnes, Kristoffer Haugarvoll, Charalampos Tzoulis
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pcbi.1008994

Estimating the cumulative incidence of COVID-19 in the United States using influenza surveillance, virologic testing, and mortality data: Four complementary approaches
Cited by: 27
Author(s): Fred Lu, André T. Nguyen, Nicholas Link, Mathieu Molina, Jessica T. Davis, Matteo Chinazzi, Xinyue Xiong, Alessandro Vespignani, Marc Lipsitch, Mauricio Santillana
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0247466

A core outcome set for research and clinical practice in women with pelvic girdle pain: PGP-COS
Cited by: 11
Author(s): Alexandria Remus, Valerie Smith, Annelie Gutke, Juan Jose Saldaña Mena, Siv Mørkved, Lena Nilsson Wikmar, Birgitta Öberg, Christina Olsson, Hilde Stendal Robinson, Britt Stuge, Francesca Wuytack
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0243791

PEREGRINE: A genome-wide prediction of enhancer to gene relationships supported by experimental evidence
Cited by: 9
Author(s): Caitlin Mills, Anushya Muruganujan, Dustin Ebert, Crystal N. Marconett, Juan Pablo Lewinger, Paul D. Thomas
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0237248

Assessment of STAT5 as a potential therapy target in enzalutamide-resistant prostate cancer
Cited by: 11
Author(s): Holger H.H. Erb, Julia Bodenbender, Florian Handle, Tamara Diehl, Lukas Donix, Igor Tsaur, Martin Gleave, Axel Haferkamp, Johannes Huber, Susanne Fuessel, Eva Juengel, Zoran Čulig, Christian Thomas
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pcbi.1008691

Computational analysis of GAL pathway pinpoints mechanisms underlying natural variation
Cited by: 1
Author(s): Jiayin Hong, Julius Palme, Bo Hua, Michael Springer
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0250883

The effect of intramuscular injection technique on injection associated pain; a systematic review and meta-analysis
Cited by: 12
Author(s): Oluseyi Ayinde, Rachel Hayward, Jonathan Ross
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0244503

Prevention of adhesions post-abdominal surgery: Assessing the safety and efficacy of Chitogel with Deferiprone in a rat model
Cited by: 4
Author(s): Rajan Sundaresan, Catherine Bennett, Clare Cooksley, John Finnie, Markus Trochsler, Ryan D Quarrington, Claire F. Jones, Ahmed Bassiouni, Stephen C. Moratti, Alkis James Psaltis, Guy Maddern, Sarah Vreugde, Peter‐John Wormald
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1007587

Host factor prioritization for pan-viral genetic perturbation screens using random intercept models and network propagation
Cited by: 11
Author(s): Simon Dirmeier, Christopher Dächert, Martijn J. van Hemert, Ali Taş, Natacha S. Ogando, Frank J. M. van Kuppeveld, Ralf Bartenschlager, Lars Kaderali, Marco Binder, Niko Beerenwinkel
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0242983

A systematic scoping review to identify the design and assess the performance of devices for antenatal continuous fetal monitoring
Cited by: 8
Author(s): Kajal K. Tamber, Dexter J. L. Hayes, Steven Carey, Jayawan Wijekoon, Alexander Heazell
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0220958

Redefining species concepts for the Pennsylvanian scissor tooth shark, Edestus
Cited by: 1
Author(s): Leif Tapanila, Jesse Pruitt
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0240196

On the connection between real-world circumstances and online player behaviour: The case of EVE Online
Cited by: 5
Author(s): Andres M. Belaza, Jan Ryckebusch, Koen Schoors, Luis E. C. Rocha, Benjamin Vandermarliere
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0230356

Diversity in sea buckthorn (Hippophae rhamnoides L.) accessions with different origins based on morphological characteristics, oil traits, and microsatellite markers
Cited by: 16
Author(s): He Li, Chengjiang Ruan, Jian Ding, Li Jingbin, Li Wang, Xingjun Tian
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0235780

Susceptibility mapping and zoning of highway landslide disasters in China
Cited by: 12
Author(s): Chao Yin, Haoran Li, Fa Che, Ying Li, Zhinan Hu, Dong Liu
Software Mentions: 2
Published: about 6 years ago

10.1186/s12875-020-01173-2

The Patient Activation through Community Empowerment/Engagement for Diabetes Management (PACE-D) protocol: a non-randomised controlled trial of personalised care and support planning for persons living with diabetes
Cited by: 2
Author(s): Wee Hian Tan, Victor Weng Keong Loh, Kavita Venkataraman, Shoon Thai Choong, Yii Jen Lew, Meena Sundram, Keith Tsou, Soon Guan Tan, Brent Gibbons, Vikki Entwistle, Doris Young, E. Shyong Tai, Tong Wei Yew
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0244063

A prospective survey of Streptococcus pyogenes infections in French Brittany from 2009 to 2017: Comprehensive dynamic of new emergent emm genotypes
Cited by: 9
Author(s): Sarrah Boukthir, Séverine Moullec, Marie-Estelle Cariou, Alexandra Meygret, Jeff Morçet, Ahmad Faili, Samer Kayal
Software Mentions: 2
Published: over 5 years ago

10.1186/1471-2148-7-166

Evolutionary conservation of P-selectin glycoprotein ligand-1 primary structure and function
Cited by: 31
Author(s): Bénédicte Baïsse, Frédérique Galisson, Sylvain Giraud, Marc Schapira, Olivier Spertini
Software Mentions: 2
Published: about 19 years ago

10.1371/journal.pcbi.1007631

Opponent processes in visual memories: A model of attraction and repulsion in navigating insects’ mushroom bodies
Cited by: 42
Author(s): Florent Le Möel, Antoine Wystrach
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0248011

Differential responses to folic acid in an established keloid fibroblast cell line are mediated by JAK1/2 and STAT3
Cited by: 5
Author(s): Katelyn McCann, Manoj Yadav, Mohammadali E. Alishahedani, Alexandra F. Freeman, Ian A. Myles
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0247115

High throughput detection and genetic epidemiology of SARS-CoV-2 using COVIDSeq next-generation sequencing
Cited by: 100
Author(s): Rahul C. Bhoyar, Abhinav Jain, Paras Sehgal, Mohit Kumar Divakar, Disha Sharma, Mohamed Imran, Bani Jolly, Gyan Ranjan, Mercy Rophina, Sumit Sharma, Sanjay Siwach, Kavita Pandhare, Swayamprabha Sahoo, Maheswata Sahoo, Ananya Nayak, Jatindra Nath Mohanty, Jayashankar Das, Sudhir Bhandari, Sandeep Kumar Mathur, Anshul Kumar, S G Rahul, Pallavali Rojarani, J Vijaya Lakshmi, A. Surekha, P. Chandra Sekhar, Siddharth Mahajan, Shet Masih, Pawan Kumar Singh, Vijayendra Kumar, Blessy Jose, Vidur Mahajan, V. Gupta, Rakesh Gupta, Prakash Arumugam, Anjali Singh, Aditya Nandy, P. V. Ragavendran, Rakesh Mohan Jha, Anupama Kumari, Sheetal Gandotra, V. Pandu Ranga Rao, Mohammed Faruq, Sanjeev Kumar, Betsy Reshma G, Narendra Varma G., Shuvra Shekhar Roy, A. K. Sengupta, Sabyasachi Chattopadhyay, Khushboo Singhal, Shalini Pradhan, Diksha Jha, Salwa Naushin, Saruchi Wadhwa, Nishu Tyagi, M. Damodara Poojary, Vinod Scaria, Sridhar Sivasubbu
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0245811

Antimicrobial efficacy of silver nanoparticles against Candida albicans: A systematic review protocol
Cited by: 10
Author(s): Razia Z. Adam, Saadika Khan
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pmed.1003497

Association of socioeconomic deprivation with asthma care, outcomes, and deaths in Wales: A 5-year national linked primary and secondary care cohort study
Cited by: 10
Author(s): Mohammad A Alsallakh, Sarah Rodgers, Ronan A Lyons, Aziz Sheikh, Gwyn Davies
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1007954

Winter is coming: Pathogen emergence in seasonal environments
Cited by: 9
Author(s): Philippe Carmona, Sylvain Gandon
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0238585

Barriers facing persons with disability in accessing sexual and reproductive health services in sub-Saharan Africa: A systematic review
Cited by: 29
Author(s): John Kuumuori Ganle, Leonard Baatiema, Reginald Quansah, Anthony Danso‐Appiah
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pcbi.1008790

Computational epitope map of SARS-CoV-2 spike protein
Cited by: 96
Author(s): Mateusz Sikora, Sören von Bülow, Florian Blanc, Michael Gecht, Roberto Covino, Gerhard Hummer
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1007504

Bayesian modelling of high-throughput sequencing assays with malacoda
Cited by: 1
Author(s): Andrew Ghazi, Xianguo Kong, Ed S. Chen, Leonard C. Edelstein, Chad A. Shaw
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pmed.1003735

Accuracy of novel antigen rapid diagnostics for SARS-CoV-2: A living systematic review and meta-analysis
Cited by: 202
Author(s): Lukas E. Brümmer, Stephan Katzenschlager, Mary Gaeddert, Christian Erdmann, Stephani Schmitz, Marc Bota, Maurizio Grilli, Jan Larmann, Markus Weigand, Nira R. Pollock, Aurélien Macé, Sergio Carmona, Stefano Ongarello, Jilian A. Sacks, Claudia M. Denkinger
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0238554

No effect of multi-axis dot pattern symmetry on subjective duration
Cited by: 0
Author(s): Alexis D. J. Makin, Afzal Rahman, Marco Bertamini
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0239906

Pattern of forest recovery and carbon stock following shifting cultivation in Manipur, North-East India
Cited by: 16
Author(s): Pentile Thong, Uttam Kumar Sahoo, Uttam Thangjam, Rocky Pebam
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pcbi.1008122

Inferring transmission heterogeneity using virus genealogies: Estimation and targeted prevention
Cited by: 6
Author(s): Yunjun Zhang, Thomas Leitner, Jan Albert, Tom Britton
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0228165

Distinct temporal diversity profiles for nitrogen cycling genes in a hyporheic microbiome
Cited by: 11
Author(s): Karen E. Nelson, Emily B. Graham, Alex R. Crump, Sarah Fansler, Evan Arntzen, David W. Kennedy, James C. Stegen
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pcbi.1007755

Comparison of methods for rhythm analysis of complex animals’ acoustic signals
Cited by: 8
Author(s): Lara S. Burchardt, Mirjam Knörnschild
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0242546

United on Sunday: The effects of secular rituals on social bonding and affect
Cited by: 12
Author(s): Sarah Jane Charles, Valerie van Mulukom, Jennifer E. Brown, Fraser Watts, R. I. M. Dunbar, Miguel Farias
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pmed.1003347

Intake of dietary fats and fatty acids and the incidence of type 2 diabetes: A systematic review and dose-response meta-analysis of prospective observational studies
Cited by: 52
Author(s): Manuela Neuenschwander, Janett Barbaresko, Claudia R. Pischke, Nadine Iser, Julia Beckhaus, Lukas Schwingshackl, Sabrina Schlesinger
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0257055

The anthropometric assessment of body composition and nutritional status in children aged 2–15 years: A cross-sectional study from three districts in Bangladesh
Cited by: 2
Author(s): Md. Kamruzzaman, Shah Arafat Rahman, Sharmin Akter, Humaria Shushmita, M. Yunus Ali, Adnan Billah, Md. Sadat Kamal, M. Toufiq Elahi, Dipak Paul
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pcbi.1008021

Forecasting unprecedented ecological fluctuations
Cited by: 9
Author(s): Samuel R. Bray, Bo Wang
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pcbi.1008330

Model-based decoupling of evoked and spontaneous neural activity in calcium imaging data
Cited by: 11
Author(s): Marcus A. Triplett, Zac Pujic, Biao Sun, Lilach Avitan, Geoffrey J. Goodhill
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pcbi.1008194

Discovering functional sequences with RELICS, an analysis method for CRISPR screens
Cited by: 5
Author(s): Patrick C. Fiaux, Hsiuyi V. Chen, Poshen B. Chen, Aaron R Chen, Graham McVicker
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pcbi.1009052

Efficient encoding of spectrotemporal information for bat echolocation
Cited by: 1
Author(s): Adarsh Chitradurga Achutha, Herbert Peremans, Uwe Firzlaff, Dieter Vanderelst
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0232896

Evaluation of residue management practices on barley residue decomposition
Cited by: 6
Author(s): Grant Loomis, Biswanath Dari, Christopher W. Rogers, Debjani Sihi
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0231451

Sex-specific expression profiles of ecdysteroid biosynthesis and ecdysone response genes in extreme sexual dimorphism of the mealybug Planococcus kraunhiae (Kuwana)
Cited by: 8
Author(s): Miyuki Muramatsu, Tomohiro Tsuji, Sayumi Tanaka, Takahiro Shiotsuki, Akiya Jouraku, Ken Miura, Isabelle M. Vea, Chieka Minakuchi
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0242201

Simulating bout-and-pause patterns with reinforcement learning
Cited by: 5
Author(s): Kota Yamada, Atsunori Kanemura
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pmed.1003354

Risk of disease and willingness to vaccinate in the United States: A population-based survey
Cited by: 51
Author(s): Bert Baumgaertner, Benjamin J. Ridenhour, Florian Justwan, Juliet E. Carlisle, Craig R. Miller
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pcbi.1009236

Using mobility data in the design of optimal lockdown strategies for the COVID-19 pandemic
Cited by: 12
Author(s): Ratna Dutta, Susana N. Gomes, Dante Kalise, Lorenzo Pacchiardi
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pcbi.1008859

Hierarchical semantic composition of biosimulation models using bond graphs
Cited by: 13
Author(s): Niloofar Shahidi, Michael Pan, Soroush Safaei, Kenneth Tran, Edmund J. Crampin, David Nickerson
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1008110

An extended and generalized framework for the calculation of metabolic intervention strategies based on minimal cut sets
Cited by: 20
Author(s): Philipp Schneider, Axel von Kamp, Steffen Klamt
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0236857

Feasibility study of mitigation and suppression strategies for controlling COVID-19 outbreaks in London and Wuhan
Cited by: 27
Author(s): Po Yang, Jun Qi, Shuhao Zhang, Xulong Wang, Gaoshan Bi, Y. Tony Yang, Bin Sheng, Geng Yang
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0238293

Intention to use vasectomy and its associated factors among married men in Debre Tabor Town, North West Ethiopia, 2019
Cited by: 3
Author(s): Alemu Degu Ayele, Fentahun Yenealem Beyene, Kihinetu Gelaye Wudineh, Bekalu Getnet Kassa, Yitayal Ayalew Goshu, Gedefaye Nibret Mihretie
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0254438

Psychological functioning in survivors of COVID-19: Evidence from recognition of fearful facial expressions
Cited by: 3
Author(s): Federica Scarpina, Marco Godi, Stefano Corna, Ionathan Seitanidis, Paolo Capodaglio, Alessandro Mauro
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0256136

Who is to blame for COVID-19? Examining politicized fear and health behavior through a mixed methods study in the United States
Cited by: 22
Author(s): Lisa J. Hardy, Adi Mana, Leah Mundell, Menahem Neuman, Sharón Benheim, Eric E. Otenyo
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pcbi.1009149

Covasim: An agent-based model of COVID-19 dynamics and interventions
Cited by: 281
Author(s): Cliff C Kerr, Robyn M. Stuart, Dina Mistry, Romesh Abeysuriya, Katherine Rosenfeld, Gregory R. Hart, Rafael C. Núñez, Jamie A. Cohen, Prashanth Selvaraj, Brittany Hagedorn, Lauren George, Michał Jastrzȩbski, Amanda S Izzo, Greer Fowler, Anna Palmer, Dominic Delport, Nick Scott, Sherrie L Kelly, Caroline S. Bennette, Bradley G. Wagner, Stewart T. Chang, Assaf P. Oron, E. A. Wenger, Jasmina Panovska‐Griffiths, Michael Famulare, Daniel J. Klein
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pmed.1003325

Switch to second-line versus continued first-line antiretroviral therapy for patients with low-level HIV-1 viremia: An open-label randomized controlled trial in Lesotho
Cited by: 13
Author(s): Alain Amstutz, Bienvenu Lengo Nsakala, Fiona Vanobberghen, Josephine Muhairwe, Tracy R. Glass, Tilo Namane, Tlali Mpholo, Manuel Battegay, Thomas Klimkait, Niklaus Daniel Labhardt
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0254638

Social sentiment segregation: Evidence from Twitter and Google Trends in Chile during the COVID-19 dynamic quarantine strategy
Cited by: 11
Author(s): F. R. Díaz, Pablo A. Henríquez
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0235920

Information differences across spatial resolutions and scales for disease surveillance and analysis: The case of Visceral Leishmaniasis in Brazil
Cited by: 3
Author(s): Joseph L. Servadio, Gustavo Machado, Julio Álvarez, Francisco Edilson de Ferreira Lima Júnior, Renato Vieira Alves, Matteo Convertino
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0227532

Efficacy and safety of anti-viral therapy for Hepatitis B virus-associated glomerulonephritis: A meta-analysis
Cited by: 5
Author(s): Baohui Fu, Yue Ji, Shouci Hu, Tong Ren, Maheshkumar Satishkumar Bhuva, Гэ Ли, Hongtao Yang
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0251299

Characteristics and limitations of national antimicrobial surveillance according to sales and claims data
Cited by: 4
Author(s): Yoshiki Kusama, Yuichi Muraki, Chika Tanaka, Ryuji Koizumi, Masahiro Ishikane, Daisuke Yamasaki, Masaki Takao, Norio Ohmagari
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pmed.1003190

Universal third-trimester ultrasonic screening using fetal macrosomia in the prediction of adverse perinatal outcome: A systematic review and meta-analysis of diagnostic test accuracy
Cited by: 20
Author(s): Alexandros A Moraitis, Norman Shreeve, Ulla Sovio, Peter Brocklehurst, Alexander E P Heazell, Jim Thornton, Stephen C. Robson, Aris T. Papageorghiou, Gordon C. S. Smith
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0228942

Disease burden and seasonal impact of improving rotavirus vaccine coverage in the United States: A modeling study
Cited by: 5
Author(s): Chin-En Ai, Molly Steele, Benjamin A. Lopman
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pcbi.1007922

All-atom simulation of the HET-s prion replication
Cited by: 8
Author(s): Luca Terruzzi, Giovanni Spagnolli, Alberto Boldrini, Jesús R. Requena, Emiliano Biasini, Pietro Faccioli
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pcbi.1008642

Health inequities in influenza transmission and surveillance
Cited by: 18
Author(s): Casey M. Zipfel, Vittoria Colizza, Shweta Bansal
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0247057

Is a verification phase useful for confirming maximal oxygen uptake in apparently healthy adults? A systematic review and meta-analysis
Cited by: 18
Author(s): Victor A. B. Costa, Adrian W. Midgley, Sean Carroll, Todd A. Astorino, Tainah de Paula, Paulo Farinatti, Felipe Cunha
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1007990

Using information theory to optimise epidemic models for real-time prediction and estimation
Cited by: 40
Author(s): Kris V Parag, Christl A. Donnelly
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0253694

The Minimal Phenomenal Experience questionnaire (MPE-92M): Towards a phenomenological profile of “pure awareness” experiences in meditators
Cited by: 19
Author(s): Alex Gamma, Thomas Metzinger
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0227176

Evaluating poverty alleviation strategies in a developing country
Cited by: 53
Author(s): Pramod K. Singh, Harpalsinh Chudasama
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0232474

Presence of HPV with overexpression of p16INK4a protein and EBV infection in penile cancer—A series of cases from Brazil Amazon
Cited by: 5
Author(s): Valquíria do Carmo Alves Martins, Isabela Werneck da Cunha, Giuseppe Figliuolo, Heidy Halanna de Melo Farah Rondon, Paloma Menezes de Souza, Felipe Luz Torres Silva, Guilherme Luz Torres Silva, Michele de Souza Bastos, Daniel Barros de Castro, Monique Freire Santana, Rajendranath Ramasawmy, José Eduardo Levi, Kátia Luz Torres
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pcbi.1007907

Dynamic decorrelation as a unifying principle for explaining a broad range of brightness phenomena
Cited by: 2
Author(s): Alejandro Lerer, Hans Supèr, Matthias Keil
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0226508

Area extraction and spatiotemporal characteristics of winter wheat–summer maize in Shandong Province using NDVI time series
Cited by: 9
Author(s): Chao Dong, Gengxing Zhao, Yuanwei Qin, Huawei Wan
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pmed.1003383

Violence prevention accelerators for children and adolescents in South Africa: A path analysis using two pooled cohorts
Cited by: 21
Author(s): Lucie Cluver, William E. Rudgard, Elona Toska, Siyanai Zhou, Laurence Campeau, Yulia Shenderovich, Mark Orkin, Chris Desmond, Alexander Butchart, Howard Taylor, Franziska Meinck, Lorraine Sherr
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0241313

Single image super-resolution via Image Quality Assessment-Guided Deep Learning Network
Cited by: 5
Author(s): Zhengqiang Xiong, Manhui Lin, Zhen Lin, Tao Sun, Guangyi Yang, Zhenxing Wang
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pmed.1003006

Chemotherapy effectiveness in trial-underrepresented groups with early breast cancer: A retrospective cohort study
Cited by: 13
Author(s): Ewan Gray, Joachim Marti, Jeremy Wyatt, David H. Brewster, Peter Hall
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pmed.1003132

Distinct subtypes of polycystic ovary syndrome with novel genetic associations: An unsupervised, phenotypic clustering analysis
Cited by: 106
Author(s): Matthew Dapas, Frederick Lin, Girish N. Nadkarni, Ryan Sisk, Richard S. Legro, Margrit Urbanek, M. Geoffrey Hayes, Andrea Dunaif
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0246326

The differential impact of pediatric COVID-19 between high-income countries and low- and middle-income countries: A systematic review of fatality and ICU admission in children worldwide
Cited by: 84
Author(s): Taito Kitano, Mao Kitano, Carsten Krueger, Hassan H. Jamal, Hatem Al Rawahi, Rachelle Lee-Krueger, Rose Doulin Sun, Sandra Isabel, Marta Taida García-Ascaso, Hiromi Hibino, B. Camara, Marc R. Isabel, Leanna Cho, H M Groves, Pierre Philippe Piché-Renaud, Michael Kossov, Ikuho Kou, Ilsu Jon, Ana C. Blanchard, Nao Matsuda, Quenby Mahood, Anu Wadhwa, Ari Bitnun, Shaun K. Morris
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1008706

Up-down biphasic volume response of human red blood cells to PIEZO1 activation during capillary transits
Cited by: 14
Author(s): Simon Rogers, Virgilio L. Lew
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1008451

A modular framework for multiscale, multicellular, spatiotemporal modeling of acute primary viral infection and immune response in epithelial tissues and its application to drug therapy timing and effectiveness
Cited by: 38
Author(s): T. J. Sego, Josua O. Aponte-Serrano, Juliano Ferrari Gianlupi, Samuel Heaps, Kira Breithaupt, Lutz Brusch, Jessica R. Crawshaw, James M. Osborne, Ellen M. Quardokus, Richard K. Plemper, James A. Glazier
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0243571

Synergies between urban heat island and heat waves in Seoul: The role of wind speed and land use characteristics
Cited by: 35
Author(s): Jack Ngarambe, Jacques Nganyiyimana, Inhan Kim, Mat Santamouris, Geun Young Yun
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pcbi.1009247

A novel artificial intelligence-based approach for identification of deoxynucleotide aptamers
Cited by: 7
Author(s): Frances L. Heredia, Abiel Roche-Lima, Elsie I. Parés-Matos
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0237204

Adults vs. neonates: Differentiation of functional connectivity between the basolateral amygdala and occipitotemporal cortex
Cited by: 5
Author(s): Heather A. Hansen, Jin Li, Zeynep M. Saygin
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pmed.1003599

Blood pressure-lowering treatment for the prevention of cardiovascular events in patients with atrial fibrillation: An individual participant data meta-analysis
Cited by: 12
Author(s): Ana-Catarina Pinho-Gomes, Luís Filipe Azevedo, Emma Copland, Dexter Canoy, Milad Nazarzadeh, Rema Ramakrishnan, Eivind Berge, Johan Sundström, Dipak Kotecha, Mark Woodward, Koon Teo, Barry R. Davis, John Chalmers, Carl J. Pepine, Kazem Rahimi
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1009212

The unbiased estimation of the fraction of variance explained by a model
Cited by: 6
Author(s): Dean A. Pospisil, Wyeth Bair
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0247704

A message-passing multi-task architecture for the implicit event and polarity detection
Cited by: 1
Author(s): Chunli Xiang, Junchi Zhang, Donghong Ji
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1007339

Multi-state design of flexible proteins predicts sequences optimal for conformational change
Cited by: 16
Author(s): Marion F. Sauer, Alexander M. Sevy, James E. Crowe, Jens Meiler
Software Mentions: 2
Published: over 6 years ago