Projects: pypi: PACE

https://packages.ecosyste.ms/registries/pypi.org/packages/PACE

Data Quality of Experimental Data
10 versions
Latest release: over 10 years ago
51 downloads last month

Enhanced Analysis
Repository Activity:
README Analysis:
Science Score: 90/100
Starting Score: 100 points
Bonuses:
  • +6 Science terms in README
    3 scientific terms found in README
Penalties:
  • -10 PyPI ecosystem
    General-purpose ecosystem

Very Likely Science (90)

Papers Mentioning PACE 13,779

10.1371/journal.ppat.1008594
Intra-host changes in Kaposi sarcoma-associated herpesvirus genomes in Ugandan adults with Kaposi sarcoma
Cited by: 8
Author(s): Jan Clement Santiago, Jason D. Goldman, Hong Zhao, Alec Pankow, Fred Okuku, Michael Schmitt, Lennie H. Chen, Catherine A. Hill, Corey Casper, Warren Phipps, James I. Mullins
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0236550
The species composition—ecosystem function relationship: A global meta-analysis using data from intact and recovering ecosystems
Cited by: 15
Author(s): Peter J. Carrick, Katherine Forsythe
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pntd.0009516
Clinical manifestations and health outcomes associated with Zika virus infections in adults: A systematic review
Cited by: 9
Author(s): Sheliza Halani, Panashe E Tombindo, Ryan O’Reilly, Rafael N Miranda, Laura K. Erdman, Clare Whitehead, Joanna Bielecki, Lauren Ramsay, Raphael Ximenes, Justin Boyle, Carsten Krueger, Shannon Willmott, Shaun K. Morris, Kellie Murphy, Beate Sander
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0238402
Automatic unsupervised respiratory analysis of infant respiratory inductance plethysmography signals
Cited by: 7
Author(s): Carlos A. Robles-Rubio, Robert E. Kearney, Gianluca Bertolizio, Karen Brown
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0250262
Neonatal valproic acid exposure produces altered gyrification related to increased parvalbumin-immunopositive neuron density with thickened sulcal floors
Cited by: 6
Author(s): Kazuhiko Sawada, Shiori Kamiya, Ichio Aoki
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0244748
Mental health and psychosocial support strategies in highly contagious emerging disease outbreaks of substantial public concern: A systematic scoping review
Cited by: 24
Author(s): Angela Kunzler, Jutta Stoffers‐Winterling, Marlene Stoll, Alexander Lucas Mancini, Sophie Lehmann, Manpreet Blessin, Donya Gilan, Isabella Helmreich, Frank T. Hufert, Klaus Lieb
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0255576
Intraspecific genetic variability and diurnal activity affect environmental DNA detection in Japanese eel
Cited by: 4
Author(s): Sayaka Takahashi, Shingo Takada, Hiroki Yamanaka, Reiji Masuda, Atsushi Kasai
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.ppat.1008908
A mating-induced reproductive gene promotes Anopheles tolerance to Plasmodium falciparum infection
Cited by: 9
Author(s): Perrine Marcenac, W. Robert Shaw, Evdoxia G. Kakani, Sara N. Mitchell, Adam South, Kristine Werling, Eryney Marrogi, Daniel G. Abernathy, Serge Yerbanga, Roch K. Dabiré, Abdoulaye Diabaté, Thierry Léfèvre, Flaminia Catteruccia
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0244699
Proteomic identification of the UDP-GlcNAc: PI α1–6 GlcNAc-transferase subunits of the glycosylphosphatidylinositol biosynthetic pathway of Trypanosoma brucei
Cited by: 3
Author(s): Zhe Ji, Michele Tinti, Michael A. J. Ferguson
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0237112
Effects of nutritional supplements on the re-infection rate of soil-transmitted helminths in school-age children: A systematic review and meta-analysis
Cited by: 3
Author(s): Aisha Ummi Jibrin Isah, Obinna Ikechukwu Ekwunife, Izuchukwu Loveth Ejie, Olena Mandrik
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0242939
DamID identifies targets of CEH-60/PBX that are associated with neuron development and muscle structure in Caenorhabditis elegans
Cited by: 5
Author(s): Pieter Van de Walle, Celia Muñoz-Jiménez, Peter Askjaer, Liliane Schoofs, Liesbet Temmerman
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pntd.0008711
Validation of the Micronutrient and Environmental Enteric Dysfunction Assessment Tool and evaluation of biomarker risk factors for growth faltering and vaccine failure in young Malian children
Cited by: 9
Author(s): Michael B. Arndt, Jason L. Cantera, Laina D. Mercer, Michael Kalnoky, Heather White, Gregory Bizilj, David S. Boyle, Eugenio L. de Hostos, Robert K. M. Choy
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0241751
Perioperative and anesthesia-related cardiac arrest and mortality rates in Brazil: A systematic review and proportion meta-analysis
Cited by: 10
Author(s): Leandro Gobbo Braz, José Reinaldo Cerqueira Bráz, Marília Pinheiro Módolo, José Eduardo Corrente, Rafael Sanchez, Mariana Pacchioni, Julia B. Cury, Iva B. Soares, Mariana Gobbo Braz
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0251797
LINC00958 promotes proliferation, migration, invasion, and epithelial-mesenchymal transition of oesophageal squamous cell carcinoma cells
Cited by: 7
Author(s): Biqi Wang, Duo Tang, Zijia Liu, Qian Wang, Shengjun Xue, Zijie Zhao, Dongdong Feng, Chao Sheng, Jintao Li, Zhixiang Zhou
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0250939
Uveal melanoma: Long-term survival
Cited by: 12
Author(s): Tomas Radivoyevitch, Emily C. Zabor, Arun D. Singh
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pcbi.1008746
Margination and adhesion dynamics of tumor cells in a real microvascular network
Cited by: 15
Author(s): Sitong Wang, Ting Ye, Guansheng Li, Xuejiao Zhang, Huixin Shi
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0240031
Active household contact screening for tuberculosis and provision of isoniazid preventive therapy to under-five children in Afghanistan
Cited by: 6
Author(s): Said Mirza Sayedi, Mohammad Khaled Seddiq, Mohammad Khakerah Rashidi, Ghulam Qader Qader, Naser Ikram, Muluken Melese, Pedro Suarez
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0233285
Investigations of the mechanisms of interactions between four non-conventional species with Saccharomyces cerevisiae in oenological conditions
Cited by: 14
Author(s): Olivier Harlé, Judith Legrand, Catherine Tesnière, Martine Pradal, Jean-Roch Mouret, Thibault Nidelet
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.ppat.1009209
Enhanced biofilm and extracellular matrix production by chronic carriage versus acute isolates of Salmonella Typhi
Cited by: 7
Author(s): Aishwarya Devaraj, Juan F. González, Bradley Eichar, Gaëtan Thilliez, Robert A. Kingsley, Stephen Baker, Marc W. Allard, Lauren O. Bakaletz, John S. Gunn, Steven D. Goodman
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.ppat.1009133
Emergence of artemisinin-resistant Plasmodium falciparum with kelch13 C580Y mutations on the island of New Guinea
Cited by: 70
Author(s): Olivo Miotto, Makoto Sekihara, Sanro Tachibana, Masato Yamauchi, Richard D. Pearson, Roberto Amato, Sónia Gonçalves, Somya Mehra, Rintis Noviyanti, Jutta Marfurt, Sarah Auburn, Ric N. Price, Ivo Müeller, Mie Ikeda, Toshiyuki Mori, Makoto Hirai, Livingstone Tavul, Manuel W Hetzel, Moses Laman, Alyssa E. Barry, Pascal Ringwald, Jun Ohashi, Francis Hombhanje, Dominic Kwiatkowski, Toshihiro Mita
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0240583
Pre-lacteal feeding practices and associated factors among mothers of children aged less than 12 months in Jinka Town, South Ethiopia, 2018/19
Cited by: 12
Author(s): Muluken Bekele Sorrie, Elias Amaje, Feleke Gebremeskel
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0247951
Understanding the impact of the SARS-COV-2 pandemic on hospitalized patients with substance use disorder
Cited by: 7
Author(s): Caroline King, Taylor A. Vega, Dana Button, Christina Nicolaidis, Jessica Gregg, Honora Englander
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0252473
Development and psychometric properties of the Nursing Student Academic Resilience Inventory (NSARI): A mixed-method study
Cited by: 3
Author(s): Tayyebeh Ali‐Abadi, Abbas Ebadi, Hamid Sharif Nia, Mohsen Soleimani, Ali Asghar Ghods
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0243139
Development platform for artificial pancreas algorithms
Cited by: 5
Author(s): Mohamed Smaoui, Rémi Rabasa‐Lhoret, Ahmad Haidar
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0252271
Mathematical modeling of the transmission of SARS-CoV-2—Evaluating the impact of isolation in São Paulo State (Brazil) and lockdown in Spain associated with protective measures on the epidemic of CoViD-19
Cited by: 22
Author(s): Hyun Mo Yang, Luís Pedro Lombardi, Fábio Fernandes Morato Castro, Ariana Campos Yang
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pntd.0008972
Natural arbovirus infection rate and detectability of indoor female Aedes aegypti from Mérida, Yucatán, Mexico
Cited by: 9
Author(s): Oscar D. Kirstein, Guadalupe Ayora-Talavera, Edgar Koyoc-Cardeña, Daniel Chan Espinoza, Azael Che-Mendoza, Azael Cohuo-Rodríguez, Pilar Granja-Pérez, Henry Puerta-Guardo, Norma Pavía-Ruz, Mike W. Dunbar, Pablo Manrique-Saide, Gonzalo M. Vazquez‐Prokopec
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0232896
Evaluation of residue management practices on barley residue decomposition
Cited by: 6
Author(s): Grant Loomis, Biswanath Dari, Christopher W. Rogers, Debjani Sihi
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.ppat.1008935
Deciphering the molecular mechanisms of mother-to-egg immune protection in the mealworm beetle Tenebrio molitor
Cited by: 11
Author(s): Guillaume Tetreau, Julien Dhinaut, Richard Galinier, Pascaline Audant-Lacour, Sébastien Voisin, Karim Arafah, Manon Chogne, Frédérique Hilliou, Anaïs Bordes, Camille Sabarly, Philippe Chan, Marie‐Laure Walet‐Balieu, David Vaudry, David Timothy Duval, Philippe Bulet, Christine Coustau, Yannick Moret, Benjamin Gourbal
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0228546
Shelter in Smoleń III – A unique example of stratified Holocene clastic cave sediments in Central Europe, a lithostratigraphic stratotype and a record of regional paleoecology
Cited by: 6
Author(s): Maciej T. Krajcarz, Marcin Szymanek, Magdalena Krajcarz, Andrea Pereswiet-Soltan, Witold Paweł Alexandrowicz, Magdalena Sudoł-Procyk
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0242496
Percutaneous Chevron/Akin (PECA) versus open scarf/Akin (SA) osteotomy treatment for hallux valgus: A systematic review and meta-analysis
Cited by: 11
Author(s): Gabriel Ferraz Ferreira, Vinícius Quadros Borges, Leonardo Moraes, Kelly Cristina Stéfani
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0246451
Systematic review and meta-analysis of cohort studies of long term outdoor nitrogen dioxide exposure and mortality
Cited by: 30
Author(s): David M. Stieb, Rania Berjawi, Monica Emode, Carine Zheng, Dina H. Salama, Robyn Hocking, Ninon Lyrette, Carlyn J. Matz, Éric Lavigne, Hwashin Hyun Shin
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pcbi.1007895
A systematic machine learning and data type comparison yields metagenomic predictors of infant age, sex, breastfeeding, antibiotic usage, country of origin, and delivery type
Cited by: 18
Author(s): Le Goallec A, Braden T. Tierney, Jacob M. Luber, Evan M. Cofer, Aleksandar D. Kostic, Chirag Patel
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pcbi.1009328
Targeted modulation of protein liquid–liquid phase separation by evolution of amino-acid sequence
Cited by: 16
Author(s): Simon M. Lichtinger, Adiran Garaizar, Rosana Collepardo-Guevara, Aleks Reinhardt
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0238237
Household storage, surplus and supra-household storage in prehistoric and protohistoric societies of the Western Mediterranean
Cited by: 9
Author(s): Georgina Prats, Ferran Antolín, Natàlia Alonso
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0250883
The effect of intramuscular injection technique on injection associated pain; a systematic review and meta-analysis
Cited by: 12
Author(s): Oluseyi Ayinde, Rachel Hayward, Jonathan Ross
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.ppat.1008985
The CLIP-domain serine protease CLIPC9 regulates melanization downstream of SPCLIP1, CLIPA8, and CLIPA28 in the malaria vector Anopheles gambiae
Cited by: 16
Author(s): Gregory L. Sousa, Ritika Bishnoi, Richard H. G. Baxter, Michael Povelones
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.ppat.1009001
Fluorescent secreted bacterial effectors reveal active intravacuolar proliferation of Listeria monocytogenes in epithelial cells
Cited by: 18
Author(s): Caroline Peron-Cane, José Carlos Fernández Fernández, Julien Leblanc, Laure Wingertsmann, Arnaud Gautier, Nicolas Desprat, Alice Lebreton
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pcbi.1007720
Generalizing to generalize: Humans flexibly switch between compositional and conjunctive structures during reinforcement learning
Cited by: 17
Author(s): Nicholas T. Franklin, Michael J. Frank
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0242605
Characterization of binding between model protein GA-Z and human serum albumin using asymmetrical flow field-flow fractionation and small angle X-ray scattering
Cited by: 4
Author(s): Jun Kyun Choi, Marie Wahlgren, Vilhelm Ek, Ulla Elofsson, Jonas Fransson, Lars Nilsson, Ann E. Terry, Christopher Söderberg
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.ppat.1009012
Effector prediction and characterization in the oomycete pathogen Bremia lactucae reveal host-recognized WY domain proteins that lack the canonical RXLR motif
Cited by: 26
Author(s): Kelsey Wood, Munir Nur, Juliana Gil, Kyle Fletcher, Kim Lakeman, Dasan Gann, Ayumi Gothberg, Tina Khuu, Jennifer Kopetzky, Sanye Naqvi, Archana Pandya, Chi Zhang, Brigitte Maisonneuve, Mathieu A. Pel, Richard W. Michelmore
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.ppat.1008328
Glutamate dehydrogenase (Gdh2)-dependent alkalization is dispensable for escape from macrophages and virulence of Candida albicans
Cited by: 14
Author(s): Fitz Gerald S. Silao, Kicki Ryman, Tong Jiang, Matthew Ward, Nicolas Hansmann, Chris Molenaar, Ningning Liu, Changbin Chen, Per O. Ljungdahl
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.ppat.1008841
Phosphorylation controls RNA binding and transcription by the influenza virus polymerase
Cited by: 13
Author(s): Anthony R. Dawson, Gary Wilson, Elyse C. Freiberger, Arindam Mondal, Joshua J. Coon, Andrew Mehle
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pcbi.1008974
The hierarchical packing of euchromatin domains can be described as multiplicative cascades
Cited by: 3
Author(s): Amra Noa, Hui-Shun Kuan, Vera Aschmann, Vasily Zaburdaev, Lennart Hilbert
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pcbi.1009246
Adaptation supports short-term memory in a visual change detection task
Cited by: 9
Author(s): Brian Hu, Marina Garrett, Peter A. Groblewski, Douglas R. Ollerenshaw, Jiaqi Shang, Kate Roll, Sahar Manavi, Christof Koch, Shawn R. Olsen, Ştefan Mihalaş
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0229699
Gut carriage of antimicrobial resistance genes in women exposed to small-scale poultry farms in rural Uganda: A feasibility study
Cited by: 2
Author(s): Ana A. Weil, Meti D. Debela, Daniel Muyanja, Bernard Kakuhikire, Charles Baguma, David R. Bangsberg, Alexander C. Tsai, Peggy S. Lai
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0250123
COVID-19 and vaccine hesitancy: A longitudinal study
Cited by: 367
Author(s): Ariel Fridman, Rachel Gershon, Ayelet Gneezy
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0244056
Viruses in unexplained encephalitis cases in American black bears (Ursus americanus)
Cited by: 10
Author(s): Charles E. Alex, Elizabeth Fahsbender, Eda Altan, Robert J. Bildfell, Peregrine L. Wolff, Ling Jin, Wendy Black, K. A. Jackson, Leslie W. Woods, Brandon Munk, Tiffany Tse, Eric Delwart, Patricia A. Pesavento
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0233794
Sequencing B cell receptors from ferrets (Mustela putorius furo)
Cited by: 5
Author(s): Julius Wong, Celeste Ming-Kay Tai, Aeron C. Hurt, Hyon-Xhi Tan, Stephen J. Kent, Adam K. Wheatley
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0223402
Prosthesis design of animal models of periprosthetic joint infection following total knee arthroplasty: A systematic review
Cited by: 13
Author(s): Jie Ke, Peng Deng, Hongyan Cao, Wenjun Feng, Jinlun Chen, Yirong Zeng
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pone.0255175
Assessing the severity of laparotomy and partial hepatectomy in male rats—A multimodal approach
Cited by: 3
Author(s): Leonie Zieglowski, Anna Maria Kümmecke, Lisa Ernst, Rupert Palme, Ralf Weiskirchen, Steven R. Talbot, René Tolba
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0225244
Establishment of the experimental procedure for prediction of conjugation capacity in mutant UGT1A1
Cited by: 5
Author(s): Yutaka Takaoka, Atsuko Takeuchi, Aki Sugano, Kenji Miura, Mika Ohta, Takashi Suzuki, Daisuke Kobayashi, Takuji Kimura, Juichi Sato, Nobutaro Ban, Hisahide Nishio, Toshiyuki Sakaeda
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pone.0256667
Perturbed transcriptional profiles after chronic low dose rate radiation in mice
Cited by: 5
Author(s): Hildegunn Dahl, Dag Markus Eide, Torstein Tengs, Nur Duale, Jorke H. Kamstra, Deborah Oughton, Ann‐Karin Olsen
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0248914
Community participation in the collaborative governance of primary health care facilities, Uasin Gishu County, Kenya
Cited by: 8
Author(s): Jackline Sitienei, Lenore Hilda Manderson, Mabel Nangami
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0255975
Intravesical CD74 and CXCR4, macrophage migration inhibitory factor (MIF) receptors, mediate bladder pain
Cited by: 3
Author(s): Shaojing Ye, Fei Ma, Dlovan F. D. Mahmood, Katherine L. Meyer-Siegler, Raymond E. Menard, David E. Hunt, Lin Leng, Richard Bucala, Pedro L. Vera
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0244619
Social networks influence farming practices and agrarian sustainability
Cited by: 13
Author(s): Amaia Albizua, Elena M. Bennett, Guillaume Larocque, Robert W. Krause, Unai Pascual
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0242204
Real-time drone derived thermal imagery outperforms traditional survey methods for an arboreal forest mammal
Cited by: 15
Author(s): Ryan R. Witt, Chad T. Beranek, Lachlan G. Howell, Shelby A. Ryan, John Clulow, Neil R. Jordan, Bob Denholm, Adam Roff
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0246844
alms1 mutant zebrafish do not show hair cell phenotypes seen in other cilia mutants
Cited by: 0
Author(s): Lauren Parkinson, Tamara M. Stawicki
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0239047
The calmodulin redox sensor controls myogenesis
Cited by: 2
Author(s): Alex W Steil, Jacob W Kailing, Cade J Armstrong, Daniel G. Walgenbach, Jennifer C. Klein
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0236777
Google searches for suicide and suicide risk factors in the early stages of the COVID-19 pandemic
Cited by: 53
Author(s): Emily A. Halford, Alison M. Lake, Madelyn S. Gould
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.ppat.1008772
Babesia bovis Rad51 ortholog influences switching of ves genes but is not essential for segmental gene conversion in antigenic variation
Cited by: 5
Author(s): Erin A. Mack, Massimiliano S. Tagliamonte, Yu-Ping Xiao, Samantha Quesada, David R. Allred
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.ppat.1008843
The gammaherpesviral TATA-box-binding protein directly interacts with the CTD of host RNA Pol II to direct late gene transcription
Cited by: 12
Author(s): Angelica F. Castañeda, Allison L. Didychuk, Robert K. Louder, Chloe O. McCollum, Zoe H. Davis, Eva Nogales, Britt A. Glaunsinger
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.ppat.1008917
Novel Babesia bovis exported proteins that modify properties of infected red blood cells
Cited by: 15
Author(s): Hassan Hakimi, Thomas J. Templeton, Minoru Sakaguchi, Junya Yamagishi, Shuichi Miyazaki, Kazuhide Yahata, Takayuki Uchihashi, Shin-ichiro Kawazu, O. Kaneko, Masahito Asada
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0233662
The effect of a ketogenic diet and synergy with rapamycin in a mouse model of breast cancer
Cited by: 26
Author(s): Yiyu Zou, Susan Fineberg, Alexander Pearlman, Richard D. Feinman, Eugene J. Fine
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0254098
Heart rate variability analysis for the assessment of immersive emotional arousal using virtual reality: Comparing real and virtual scenarios
Cited by: 9
Author(s): Javier Marín‐Morales, Juan Luis Higuera-Trujillo, Jaime Guixeres, Carmen Llinares, Mariano Alcañíz, Gaetano Valenza
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0240292
Transforming students’ attitudes towards learning through the use of successful educational actions
Cited by: 18
Author(s): Javier Díez-Palomar, Rocío García-Carrión, Linda Hargreaves, María Vieites
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0251814
Empanelment of health care facilities under Ayushman Bharat Pradhan Mantri Jan Arogya Yojana (AB PM-JAY) in India
Cited by: 19
Author(s): Jaison Joseph, Hari Sankar, Devaki Nambiar
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0234236
Microneutralization assay titer correlates analysis in two phase 3 trials of the CYD-TDV tetravalent dengue vaccine in Asia and Latin America
Cited by: 8
Author(s): Lindsay N. Carpp, Youyi Fong, Matthew Bonaparte, Zoe Moodie, Michal Juraska, Ying Huang, Brenda Price, Yingying Zhuang, Jason Shao, Lingyi Zheng, Laurent Chambonneau, Robert J. Small, Saranya Sridhar, Carlos A. DiazGranados, Peter B. Gilbert
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0246538
Polygenic risk score validation using Korean genomes of 265 early-onset acute myocardial infarction patients and 636 healthy controls
Cited by: 5
Author(s): Youngjune Bhak, Yeonsu Jeon, Sungwon Jeon, Changhan Yoon, Min Kim, Asta Blažytė, Yeonkyung Kim, Younghui Kang, Changjae Kim, Sang Yeub Lee, Jang‐Whan Bae, Weon Kim, Yeo Jin Kim, Jungae Shim, Nayeong Kim, Sung Chun, Byoung-Chul Kim, Semin Lee, Jong Bhak, Eun‐Seok Shin
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pcbi.1007661
An electrodiffusive, ion conserving Pinsky-Rinzel model with homeostatic mechanisms
Cited by: 21
Author(s): Marte J. Sætra, Gaute T. Einevoll, Geir Halnes
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pntd.0009209
Revised estimates of leprosy disability weights for assessing the global burden of disease: A systematic review and individual patient data meta-analysis
Cited by: 5
Author(s): Shri Lak Nanjan Chandran, Anuj Tiwari, Anselmo Alves Lustosa, Betül Demir, Bob Bowers, Rachel Gimenes Albuquerque, Ricardo Prado, S. M. Lambert, H Watanabe, Juanita A. Haagsma, Jan Hendrik Richardus
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0257569
Population level differences in overwintering survivorship of blue crabs (Callinectes sapidus): A caution on extrapolating climate sensitivities along latitudinal gradients
Cited by: 4
Author(s): Adelle I. Molina, Robert M. Cerrato, Janet A. Nye
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.ppat.1008326
CRISPR/Cas with ribonucleoprotein complexes and transiently selected telomere vectors allows highly efficient marker-free and multiple genome editing in Botrytis cinerea
Cited by: 44
Author(s): Thomas Leisen, Fabian Bietz, J. Werner, Alex Wegner, Ulrich Schaffrath, David Scheuring, Felix Willmund, Andreas Mosbach, Gabriel Scalliet, Matthias Hahn
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0227767
LeMaRns: A Length-based Multi-species analysis by numerical simulation in R
Cited by: 9
Author(s): Michael A. Spence, Hayley J. Bannister, Johnathan E. Ball, Paul J. Dolder, Christopher A. Griffiths, Robert Thorpe
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pntd.0009698
Aedes albopictus bionomics data collection by citizen participation on Procida Island, a promising Mediterranean site for the assessment of innovative and community-based integrated pest management methods
Cited by: 2
Author(s): Beniamino Caputo, Giuliano Langella, Valeria Petrella, Chiara Virgillito, Mattia Manica, Federico Filipponi, Marianna Varone, Pasquale Primo, Arianna Puggioli, Romeo Bellini, Costantino D’Antonio, Luca Iesu, Liliana Tullo, C. Rizzo, A. Longobardi, Germano Sollazzo, Maryanna Martina Perrotta, Miriana Fabozzi, F. Palmieri, Gabriele Saccone, Roberto Rosà, Alessandra della Torre, Marco Salvemini
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0249933
Rhythm and groove as cognitive mechanisms of dance intervention in Parkinson’s disease
Cited by: 7
Author(s): Anna Krotinger, Psyche Loui
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.ppat.1008792
Human papillomavirus type 38 alters wild-type p53 activity to promote cell proliferation via the downregulation of integrin alpha 1 expression
Cited by: 7
Author(s): Maria Carmen Romero-Medina, Assunta Venuti, Giusi Melita, Alexis Robitaille, Maria Grazia Ceraolo, Laura Pacini, Cécilia Sirand, Daniele Viarisio, Valério Taverniti, Purnima Gupta, Mariafrancesca Scalise, Cesare Indiveri, Rosita Accardi, Massimo Tommasino
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pcbi.1008607
PASA: Proteomic analysis of serum antibodies web server
Cited by: 8
Author(s): Oren Avram, Aya Kigel, Anna Vaisman-Mentesh, Sharon Kligsberg, Shai Rosenstein, Yael Dror, Tal Pupko, Yariv Wine
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pcbi.1008653
TranSynergy: Mechanism-driven interpretable deep neural network for the synergistic prediction and pathway deconvolution of drug combinations
Cited by: 66
Author(s): Liu Qiao, Lei Xie
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0236876
PHRF1 promotes migration and invasion by modulating ZEB1 expression
Cited by: 2
Author(s): Jin-Yu Lee, Chih-Chen Fan, Nai-Lin Chou, Hung-Wei Lin, Mau-Sun Chang
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pcbi.1008529
Minimal biophysical model of combined antibiotic action
Cited by: 4
Author(s): Bor Kavčič, Gašper Tkačik, Tobias Bollenbach
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0257346
Distance learning in higher education during COVID-19: The role of basic psychological needs and intrinsic motivation for persistence and procrastination–a multi-country study
Cited by: 38
Author(s): Elisabeth Pelikan, Selma Korlat, Julia Reiter, Julia Holzer, Martin Mayerhofer, Barbara Schober, Christiane Spiel, Oriola Hamzallari, Ana Uka, Jiarui Chen, Maritta Välimäki, Zrinka Puharić, Kelechi Evans Anusionwu, Angela Nkem Okocha, Anastassia Zabrodskaja, Katariina Salmela‐Aro, Udo Käser, Anja Schultze-Krumbholz, Sebastian Wachs, Finnur Friðriksson, Hermína Gunnþórsdóttir, Yvonne Höller, Ikuko Aoyama, Akihiko Ieshima, Yuichi Toda, Jon Konjufca, Njomza Llullaku, Reda Gedutienė, Glorianne Borg Axisa, Irena Avirović Bundalevska, Angelka Keskinova, Makedonka Radulović, Aleksandra Lewandowska-Walter, Justyna Michałek-Kwiecień, Piotr Plichta, Jacek Pyżalski, Natalia Walter, Cristina Căutișanu, Ana Iolanda Vodă, Shang Gao, M. Sirajul Islam, Kai Wistrand, Michelle F. Wright, Marko Lüftenegger
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pmed.1003543
Comparative effect of physical exercise versus statins on improving arterial stiffness in patients with high cardiometabolic risk: A network meta-analysis
Cited by: 8
Author(s): Iván Cavero‐Redondo, Jonathan J Deeks, Celia Álvarez‐Bueno, Kate Jolly, Alicia Saz‐Lara, Malcolm J Price, Carlos Pascual‐Morena, Vicente Martínez‐Vizcaíno
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0254612
How is Etuaptmumk/Two-Eyed Seeing characterized in Indigenous health research? A scoping review
Cited by: 17
Author(s): Sophie Isabelle Grace Roher, Ziwa Yu, Debbie Martin, Anita C. Benoit
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0250089
Reliability of left atrial strain reference values: A 3D echocardiographic study
Cited by: 9
Author(s): Yosuke Nabeshima, Tetsuji Kitano, Masaaki Takeuchi
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0238454
Biological batch normalisation: How intrinsic plasticity improves learning in deep neural networks
Cited by: 2
Author(s): Nolan Peter Shaw, Tyler Jackson, Jeff Orchard
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.ppat.1008716
Site-directed M2 proton channel inhibitors enable synergistic combination therapy for rimantadine-resistant pandemic influenza
Cited by: 8
Author(s): Claire Scott, Jayakanth Kankanala, Toshana L. Foster, Daniel H. Goldhill, Peng Bao, Katie J. Simmons, Marieke Pingen, Matthew Bentham, Elizabeth Atkins, Eleni-Anna Loundras, Ruth A. Elderfield, Jolyon K. Claridge, Joseph Thompson, Peter Stilwell, Ranjitha Tathineni, Clive S. McKimmie, Paul Targett-Adams, Jason R. Schnell, Graham P. Cook, Stephen D. Evans, William Barclay, Richard Foster, Stephen Griffin
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.ppat.1008794
Evolution-guided mutagenesis of the cytoplasmic incompatibility proteins: Identifying CifA’s complex functional repertoire and new essential regions in CifB
Cited by: 21
Author(s): J. Dylan Shropshire, Mahip Kalra, Seth R. Bordenstein
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.ppat.1008635
Life course exposures continually shape antibody profiles and risk of seroconversion to influenza
Cited by: 12
Author(s): Bingyi Yang, Justin Lessler, Han Zhu, Chao Qiang Jiang, Jonathan M. Read, James A. Hay, Kin On Kwok, Ruiyin Shen, Yi Guan, Steven Riley, Derek A. T. Cummings
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pcbi.1009176
Adaptive control of movement deceleration during saccades
Cited by: 8
Author(s): Simon P. Orozco, Scott T. Albert, Reza Shadmehr
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.ppat.1008619
Dynamic rotation of the protruding domain enhances the infectivity of norovirus
Cited by: 31
Author(s): Chihong Song, Reiko Takai‐Todaka, Motohiro Miki, Kei Haga, Akira Fujimoto, Ryoka Ishiyama, Kazuki Oikawa, Masahiro Yokoyama, Naoyuki Miyazaki, Katsunori Iwasaki, Kosuke Murakami, Kazuhiko Katayama, Kazuyoshi Murata
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0233679
WaSH CQI: Applying continuous quality improvement methods to water service delivery in four districts of rural northern Ghana
Cited by: 3
Author(s): Michael B. Fisher, Leslie Danquah, Zakaria Seidu, Allison N Fechter, Bansaga Saga, Jamie Bartram, Kaida M Liang, Rohit Ramaswamy
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.ppat.1008561
Bactericidal type IV secretion system homeostasis in Xanthomonas citri
Cited by: 11
Author(s): William Cenens, Maxuel O. Andrade, E.E. Llontop, Consuelo Martı́nez, Germán G. Sgro, Chuck S. Farah
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.ppat.1008652
A secreted LysM effector protects fungal hyphae through chitin-dependent homodimer polymerization
Cited by: 38
Author(s): Andrea Sánchez‐Vallet, Hui Tian, Luis Rodríguez‐Moreno, D.J. Valkenburg, Raspudin Saleem-Batcha, Stephan Wawra, Anja Kombrink, Leonie Verhage, Ronnie de Jonge, H. Peter van Esse, Alga Zuccaro, Daniel Croll, J.R. Mesters, B.P.H.J. Thomma
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.ppat.1008680
Ancient co-option of an amino acid ABC transporter locus in Pseudomonas syringae for host signal-dependent virulence gene regulation
Cited by: 22
Author(s): Qingpi Yan, Conner J. Rogan, Yin-Yuin Pang, Edward W. Davis, Jeffrey C. Anderson
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.ppat.1008530
Cryo-EM structure of the fully-loaded asymmetric anthrax lethal toxin in its heptameric pre-pore state
Cited by: 16
Author(s): Claudia Antoni, Dennis Quentin, Alexander E. Lang, Klaus Aktories, Christos Gatsogiannis, Stefan Raunser
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0241914
Genome-wide profiling of alternative splicing genes in hybrid poplar (P.alba×P.glandulosa cv.84K) leaves
Cited by: 4
Author(s): Ruixue Wang, Peng Yin, Ruixia Yang, Xiao Liu, Lijie Luo, Junfeng Xu
Software Mentions: 2
Published: almost 6 years ago
10.1371/journal.pone.0227100
Development of a risk score for prediction of poor treatment outcomes among patients with multidrug-resistant tuberculosis
Cited by: 9
Author(s): Kefyalew Addis Alene, Kerri Viney, Darren J. Gray, Emma S. McBryde, Zuhui Xu, Archie C. A. Clements
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0251387
Factors determining cognitive, motor and language scores in low birth weight infants from North India
Cited by: 5
Author(s): Ravi Prakash Upadhyay, Sunita Taneja, Suman Ranjitkar, Sarmila Mazumder, Nita Bhandari, Tarun Dua, Laxman Shrestha, Tor A. Strand
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.ppat.1007979
The TIR-domain containing effectors BtpA and BtpB from Brucella abortus impact NAD metabolism
Cited by: 39
Author(s): Julia María Coronas-Serna, Arthur Louche, María Rodríguez-Escudero, Morgane Roussin, Paul R. C. Imbert, Isabel Rodríguez-Escudero, Laurent Terradot, Marı́a Molina, Jean‐Pierre Gorvel, Víctor J. Cid, Suzana P. Salcedo
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0248072
COVID-19 lockdowns and demographically-relevant Google Trends: A cross-national analysis
Cited by: 19
Author(s): Lawrence M. Berger, Giulia Ferrari, Marion Leturcq, Lidia Panico, Anne Solaz
Software Mentions: 2
Published: over 5 years ago