10.1371/journal.pone.0233157

Two halves are less than the whole: Evidence of a length bisection bias in fish (Poecilia reticulata)
Cited by: 5
Author(s): Maria Santacà, Christian Agrillo
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0244107

A new formulation of compartmental epidemic modelling for arbitrary distributions of incubation and removal times
Cited by: 2
Author(s): P. Hernández, Carlos Peña, Alberto Ramos, J.J. Gómez-Cadenas
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0246099

Dataset search in biodiversity research: Do metadata in data repositories reflect scholarly information needs?
Cited by: 19
Author(s): Felicitas Löffler, Valentin Wesp, Birgitta König-Ries, Friederike Klan
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0238175

Time-series transcriptomic analysis reveals novel gene modules that control theanine biosynthesis in tea plant (Camellia sinensis)
Cited by: 2
Author(s): Haisheng Cao, Xiaolong He, Jinke Du, Rui Zhang, Ying Chen, Yan Ma, Qi Chen, Congbing Fang, Chi Tang Ho, Shihua Zhang, Xiaochun Wan
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0230439

A novel multi-word paradigm for investigating semantic context effects in language production
Cited by: 2
Author(s): Cornelia van Scherpenberg, Rasha Abdel Rahman, Hellmuth Obrig
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0230909

Variability of cost trajectories over the last year of life in patients with advanced breast cancer in the Netherlands
Cited by: 7
Author(s): P. Schneider, Xavier Pouwels, Valéria Lima Passos, Bram Ramaekers, S.M.E. Geurts, Khava I. E. Ibragimova, Maaike de Boer, Frans Erdkamp, B. Vriens, Agnès J. van de Wouw, Marien O den Boer, M.J.A.E. Pepels, Vivianne C. G. Tjan‐Heijnen, Manuela A. Joore
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0231700

Pharmacological treatment of depression: A systematic review comparing clinical practice guideline recommendations
Cited by: 48
Author(s): Franciele Cordeiro Gabriel, Daniela Oliveira de Melo, Renério Fráguas, Nathália Celini Leite-Santos, Rafael Augusto Mantovani da Silva, Eliane Ribeiro
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0246471

Strategies for retention of heterosexual men in HIV care in sub-Saharan Africa: A systematic review
Cited by: 14
Author(s): Sylvia Kusemererwa, Dickens Akena, Damalie Nakanjako, Joanita Kigozi, Regina Nanyunja, Mastula Nanfuka, Bennet Kizito, Joseph Mugisha Okello, Nelson K. Sewankambo
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0239781

A theoretical morphological model for quantitative description of the three-dimensional floral morphology in water lily (Nymphaea)
Cited by: 1
Author(s): Shiryu Kirié, Hideo Iwasaki, Koji Noshita, Hiroyoshi Iwata
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0249288

Characteristics and expression profiles of circRNAs during abdominal adipose tissue development in Chinese Gushi chickens
Cited by: 9
Author(s): Wenjiao Jin, Yaping Zhao, Bin Zhai, Yuanfang Li, Shengxin Fan, Pengtao Yuan, Guirong Sun, Ruirui Jiang, Yanbin Wang, Xiaojun Liu, Yadong Tian, Xiangtao Kang, Guoxi Li
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0237621

Behavior-specific occurrence patterns of Pinyon Jays (Gymnorhinus cyanocephalus) in three Great Basin study areas and significance for pinyon-juniper woodland management
Cited by: 10
Author(s): John D. Boone, Chris Witt, Elisabeth M. Ammon
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0232947

Comparative efficacy of antibiotic(s) alone or in combination of corticosteroids in adults with acute bacterial meningitis: A systematic review and network meta-analysis
Cited by: 7
Author(s): Ajaree Rayanakorn, Hooi‐Leng Ser, Priyia Pusparajah, Kok‐Gan Chan, Bey Hing Goh, Tahir Mehmood Khan, Surasak Saokaew, Shaun Wen Huey Lee, Learn‐Han Lee
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0230246

Multi-kinase control of environmental stress responsive transcription
Cited by: 9
Author(s): Kieran Mace, Joanna Krakowiak, Hana El-Samad, David Pincus
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0234354

Negshell casting: 3D-printed structured and sacrificial cores for soft robot fabrication
Cited by: 5
Author(s): Pornthep Preechayasomboon, Eric Rombokas
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0228215

Modelling the number of antenatal care visits in Bangladesh to determine the risk factors for reduced antenatal care attendance
Cited by: 18
Author(s): Kakoli Rani Bhowmik, Sumonkanti Das, Atiqul Islam
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0236126

Impact of processing method on donated human breast milk microRNA content
Cited by: 24
Author(s): Urszula Smyczyńska, Marcin A. Bartłomiejczyk, Marcin Stańczak, Paweł Sztromwasser, Aleksandra Wesołowska, Olga Barbarska, Emilia Pawlikowska, Wojciech Fendler
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0234003

Inferring transportation mode from smartphone sensors: Evaluating the potential of Wi-Fi and Bluetooth
Cited by: 8
Author(s): Andreas Bjerre-Nielsen, Kelton Minor, Piotr Sapieżyński, Sune Lehmann, David Dreyer Lassen
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0229217

Testing gene-environment interactions for rare and/or common variants in sequencing association studies
Cited by: 4
Author(s): Zihan Zhao, Jianjun Zhang, Qiuying Sha, Hao Han
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0234673

Evaluation of a large-scale flow manipulation to the upper San Francisco Estuary: Response of habitat conditions for an endangered native fish
Cited by: 11
Author(s): Ted Sommer, Rosemary Hartman, Michal Koller, Michael Koohafkan, J. Louise Conrad, Michael L. MacWilliams, Aaron J. Bever, Christina Burdi, April Hennessy, Michael P. Beakes
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0231814

BOLD and GenBank revisited – Do identification errors arise in the lab or in the sequence libraries?
Cited by: 73
Author(s): Mikko Pentinsaari, Sujeevan Ratnasingham, Scott E. Miller, Paul D. N. Hebert
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0222271

ViraMiner: Deep learning on raw DNA sequences for identifying viral genomes in human samples
Cited by: 79
Author(s): Ardi Tampuu, Zurab Bzhalava, Joakim Dillner, Rául Vicente
Software Mentions: 3
Published: about 7 years ago

10.1371/journal.pone.0246983

Who infects whom?—Reconstructing infection chains of Mycobacterium avium ssp. paratuberculosis in an endemically infected dairy herd by use of genomic data
Cited by: 9
Author(s): Annette Nigsch, Suelee Robbe‐Austerman, Tod Stuber, Paulina D. Pavinski Bitar, Yrjö T. Gröhn, Y.H. Schukken
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0230029

Dredging activity and associated sound have negligible effects on adult Atlantic sturgeon migration to spawning habitat in a large coastal river
Cited by: 8
Author(s): Matthew T. Balazik, Michael Barber, Safra Altman, Kevin J. Reine, Alan Katzenmeyer, Aaron J. Bunch, Greg C. Garman
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0233108

Environmental exposure to metal mixtures and linear growth in healthy Ugandan children
Cited by: 8
Author(s): Emily C. Moody, Elena Colicino, Robert O. Wright, Ezekiel Mupere, Ericka G. Jaramillo, Chitra Amarasiriwardena, Sarah E. Cusick
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0242503

Training intensity and improvements in exercise capacity in elderly patients undergoing European cardiac rehabilitation – the EU-CaRE multicenter cohort study
Cited by: 11
Author(s): Thimo Marcin, Prisca Eser, Eva Prescott, Leonie F Prins, Evelien Kolkman, Wendy Bruins, Astrid E van der Velde, Carlos Peña-Gil, Marie‐Christine Iliou, Diego Ardissino, Uwe Zeymer, Esther P. Meindersma, Arnoud W J van 't Hof, Ed P de Kluiver, Matthias Wilhelm
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0225287

Left ventricular mass normalization for body size in children based on an allometrically adjusted ratio is as accurate as normalization based on the centile curves method
Cited by: 3
Author(s): Hubert Krysztofiak, Marcel Młyńczak, Łukasz A. Małek, Andrzej Folga, Wojciech Braksator
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0246515

Assessing anxiety, depression and insomnia symptoms among Ebola survivors in Africa: A meta-analysis
Cited by: 15
Author(s): Jeremiah Wezenamo Acharibasam, Batholomew Chireh, Hayelom G. Menegesha
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0251565

The protein and volatile components of trail mucus in the Common Garden Snail, Cornu aspersum
Cited by: 7
Author(s): Kaylene R. Ballard, Anne Klein, R. Andrew Hayes, Tianfang Wang, Scott F. Cummins
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0237461

The association of motivation with mind wandering in trait and state levels
Cited by: 5
Author(s): Toshikazu Kawagoe, Keiichi Onoda, Shûhei Yamaguchi
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0247810

Assessment of root phenotypes in mungbean mini-core collection (MMC) from the World Vegetable Center (AVRDC) Taiwan
Cited by: 9
Author(s): Muraleedhar S. Aski, Neha Rai, V. R. Reddy, Gayacharan, Harsh Kumar Dikshit, Gyan P. Mishra, Dharmendra Singh, Arun Kumar, Renu Pandey, Madan Pal Singh, Aditya Pratap, Ramakrishnan M. Nair, Roland Schafleitner
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0252711

The Goto Kakizaki rat: Impact of age upon changes in cardiac and renal structure, function
Cited by: 5
Author(s): Patrick Meagher, Robert Civitarese, Xavier Lee, Mark Forrest Gordon, Antoinette Bugyei-Twum, Jean-François Desjardins, Golam Kabir, Yanling Zhang, Hari Kosanam, Aylin Visram, Howard Leong‐Poi, Andrew Advani, Kim A. Connelly
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0243431

Sex differences in chronic kidney disease awareness among US adults, 1999 to 2018
Cited by: 25
Author(s): Sebastian Hödlmoser, Wolfgang C. Winkelmayer, Jarcy Zee, Roberto Pecoits–Filho, Ronald L. Pisoni, Friedrich K. Port, Bruce M. Robinson, Robin Ristl, Simon Krenn, Amelie Kurnikowski, Michał Lewandowski, Allison Ton, Juan Jesús Carrero, Eva Schernhammer, Manfred Hecking
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0238255

Most frequent South Asian haplotypes of ACE2 share identity by descent with East Eurasian populations
Cited by: 24
Author(s): Anshika Srivastava, Rudra Kumar Pandey, Prajjval Pratap Singh, Pramod Kumar, Avinash Arvind Rasalkar, Rakesh Tamang, George van Driem, Pankaj Shrivastava, Gyaneshwer Chaubey
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0257520

Replicating prediction algorithms for hospitalization and corticosteroid use in patients with inflammatory bowel disease
Cited by: 3
Author(s): Ryan W. Gan, Diana Sun, Amanda R. Tatro, Shirley Cohen‐Mekelburg, Wyndy L. Wiitala, Ji Zhu, Akbar K. Waljee
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0245221

Pastoralism in the highest peaks: Role of the traditional grazing systems in maintaining biodiversity and ecosystem function in the alpine Himalaya
Cited by: 26
Author(s): Tenzing Ingty
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0255602

A comparison of comorbidity measures for predicting mortality after elective hip and knee replacement: A cohort study of data from the National Joint Registry in England and Wales
Cited by: 3
Author(s): Chris Penfold, Michael R Whitehouse, Ashley W Blom, Andrew Judge, J. Mark Wilkinson, Adrian Sayers
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0225882

Efficacy of antimalarial drugs for treatment of uncomplicated falciparum malaria in Asian region: A network meta-analysis
Cited by: 8
Author(s): Cho Naing, Maxine Whittaker, Norah Htet Htet, Saint Nway Aye, Joon Wah Mak
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0234246

Human exome and mouse embryonic expression data implicate ZFHX3, TRPS1, and CHD7 in human esophageal atresia
Cited by: 8
Author(s): Rong Zhang, Jan Gehlen, Amit Kawalia, Maria-Theodora Melissari, Tikam Chand Dakal, Athira M. Menon, Julia Höfele, Korbinian Riedhammer, Lea Waffenschmidt, Júlia Fabian, Katinka Breuer, Jeshurun C Kalanithy, Alina C. Hilger, Ingo G. H. Schmidt‐Wolf, A. Hölscher, Thomas M. Boemers, Markus Pauly, Andreas Leutner, Jörg Fuchs, Guido Seitz, Barbara Ludwikowski, Bárbara Gómez, Jochen Hubertus, Andreas Heydweiller, Ralf Kurz, Johannes Leonhardt, Ferdinand Kosch, Stefan Holland‐Cunz, Oliver Münsterer, B. M. Ure, Eberhard Schmiedeke, Jörg Neser, P. Degenhardt, Stefanie Märzheuser, Katharina Kleine, Mattias Schäfer, Nicole Spychalski, Oliver Johannes Deffaa, Jan‐Hendrik Gosemann, Martin Lacher, Stefanie Heilmann‐Heimbach, Nadine Zwink, Ekkehart Jenetzky, Michael Ludwig, Phillip Grote, Johannes Schumacher, Holger Thiele, Heiko Reutter
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0224900

UM171 induces a homeostatic inflammatory-detoxification response supporting human HSC self-renewal
Cited by: 28
Author(s): Jalila Chagraoui, Bernhard Lehnertz, Simon Girard, Jean François Spinella, Iman Fares, Elisa Tomellini, Nadine Mayotte, Sophie Corneau, Tara MacRae, Laura Simon, Guy Sauvageau
Software Mentions: 3
Published: about 7 years ago

10.1371/journal.pone.0249071

Predicting innovative firms using web mining and deep learning
Cited by: 19
Author(s): Jan Kinne, David Lenz
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0236193

A genetic model of ivabradine recapitulates results from randomized clinical trials
Cited by: 3
Author(s): Marc‐André Legault, Johanna Sandoval, Sylvie Provost, Amina Barhdadi, Louis‐Philippe Lemieux Perreault, Sonia Shah, R. Thomas Lumbers, Simon de Denus, Benoît Tyl, Jean‐Claude Tardif, Marie‐Pierre Dubé
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0239817

Dispositional cognitive effort investment and behavioral demand avoidance: Are they related?
Cited by: 10
Author(s): Alexander Strobel, Gesine Wieder, Philipp C. Paulus, Florian Ott, Sebastian Pannasch, Stefan J. Kiebel, Corinna Kührt
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0252514

Can Acropora tenuis larvae attract native Symbiodiniaceae cells by green fluorescence at the initial establishment of symbiosis?
Cited by: 7
Author(s): Hiroshi Yamashita, Kazuo Koike, Chuya Shinzato, Mitsuru Jimbo, Go Suzuki
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0256152

Radiomics machine learning study with a small sample size: Single random training-test set split may lead to unreliable results
Cited by: 26
Author(s): Chansik An, Yae Won Park, Sung Soo Ahn, Kyunghwa Han, Hwiyoung Kim, Seung Koo Lee
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0256336

Has resistance to chlorhexidine increased among clinically-relevant bacteria? A systematic review of time course and subpopulation data
Cited by: 13
Author(s): Stephen E. Buxser
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0228552

Cultivation potential projections of breadfruit (Artocarpus altilis) under climate change scenarios using an empirically validated suitability model calibrated in Hawai’i
Cited by: 13
Author(s): Kalisi Mausio, Tomoaki Miura, Noa Kekuewa Lincoln
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.ppat.1009439

A novel cell culture system modeling the SARS-CoV-2 life cycle
Cited by: 81
Author(s): Xiaohui Ju, Yangyong Zhu, Yuyan Wang, Jingrui Li, Jiaxing Zhang, Mingli Gong, Wenlin Ren, Sai Li, Jin Zhong, Linqi Zhang, Qiangfeng Cliff Zhang, Rong Zhang, Qiang Ding
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.ppat.1009410

Macrophage-specific responses to human- and animal-adapted tubercle bacilli reveal pathogen and host factors driving multinucleated cell formation
Cited by: 18
Author(s): Christophe J. Queval, Antony Fearns, Laure Botella, Alicia Smyth, Laura Schnettger, Morgane Mitermite, Esen Wooff, Bernardo Villarreal‐Ramos, Waldo L. García-Jiménez, Tiaan Heunis, Matthias Trost, Dirk Werling, Francisco J. Salguero, Stephen V. Gordon, Maximiliano G. Gutiérrez
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.ppat.1009431

High-throughput, single-copy sequencing reveals SARS-CoV-2 spike variants coincident with mounting humoral immunity during acute COVID-19
Cited by: 29
Author(s): Sung Hee Ko, Elham Bayat Mokhtari, Prakriti Mudvari, Sydney Stein, Christopher D. Stringham, Danielle A. Wagner, Sabrina Ramelli, Marcos J. Ramos‐Benitez, Jeffrey R Strich, Richard T. Davey, Tongqing Zhou, John Misasi, Peter D. Kwong, Daniel S. Chertow, Nancy J. Sullivan, Eli Boritz
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0227244

Significance-based multi-scale method for network community detection and its application in disease-gene prediction
Cited by: 3
Author(s): Ke Hu, Xu Ju, Yun-Xia Yu, Liang Tang, Xiang Qin, Jianming Li, Yonghong Tang, Yongjun Chen, Yan Zhang
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0235225

Nitrogen enrichment stimulates wetland plant responses whereas salt amendments alter sediment microbial communities and biogeochemical responses
Cited by: 3
Author(s): Mary M. Donato, Olivia Johnson, Blaire Steven, Beth A. Lawrence
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0232626

Elicitation with Bacillus QV15 reveals a pivotal role of F3H on flavonoid metabolism improving adaptation to biotic stress in blackberry
Cited by: 15
Author(s): Enrique Gutierrez‐Albanchez, Ana Gradillas, Antonia Garcı́a, Ana García‐Villaraco, Francisco Javier Gutiérrez-Mañero, Beatriz Ramos‐Solano
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pntd.0008234

Whole genome sequencing of Plasmodium vivax isolates reveals frequent sequence and structural polymorphisms in erythrocyte binding genes
Cited by: 20
Author(s): Anthony M. Ford, Daniel Kepple, Beka Raya Abagero, Jordan Connors, Richard D. Pearson, Sarah Auburn, Sisay Getachew, Colby T. Ford, Karthigayan Gunalan, Louis H. Miller, Daniel Janies, Julian C. Rayner, Guiyun Yan, Delenasaw Yewhalaw, Eugenia Lo
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0221826

Genome wide genetic dissection of wheat quality and yield related traits and their relationship with grain shape and size traits in an elite × non-adapted bread wheat cross
Cited by: 36
Author(s): Ajay Kumar, Éder Eduardo Mantovani, Şenay Şimşek, Shalu Jain, Elias M. Elias, Maryati Mohamed
Software Mentions: 3
Published: about 7 years ago

10.1371/journal.pone.0239625

Autophagy mitigates ethanol-induced mitochondrial dysfunction and oxidative stress in esophageal keratinocytes
Cited by: 14
Author(s): Prasanna M. Chandramouleeswaran, Manti Guha, Masataka Shimonosono, Kelly A. Whelan, Hirofumi Maekawa, Uma M. Sachdeva, Gordon Ruthel, Sarmistha Mukherjee, Noah Engel, Michael V. Gonzalez, James Garifallou, Shinya Ohashi, Andres J. Klein‐Szanto, Clementina Mesaros, Ian A. Blair, Renata Pellegrino da Silva, Hákon Hákonarson, Eishi Noguchi, Joseph A. Baur, Hiroshi Nakagawa
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0258019

Wave-wise comparative genomic study for revealing the complete scenario and dynamic nature of COVID-19 pandemic in Bangladesh
Cited by: 12
Author(s): Ishtiaque Ahammad, Mohammad Uzzal Hossain, Ashikur Rahman, Zeshan Mahmud Chowdhury, Arittra Bhattacharjee, Keshob Chandra Das, Chaman Ara Keya, Md. Salimullah
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0242773

Coupling of autism genes to tissue-wide expression and dysfunction of synapse, calcium signalling and transcriptional regulation
Cited by: 13
Author(s): Jamie Reilly, Louise Gallagher, Geraldine Leader, Sanbing Shen
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0254015

Multiple configurations and fluctuating trophic control in the Barents Sea food-web
Cited by: 5
Author(s): Elliot Sivel, Benjamin Planque, Ulf Lindstrøm, Nigel G. Yoccoz
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.ppat.1009549

Human DICER helicase domain recruits PKR and modulates its antiviral activity
Cited by: 15
Author(s): Thomas Montavon, Morgane Baldaccini, Mathieu Lefèvre, Erika Girardi, Béatrice Chane-Woon-Ming, Marie C. Messmer, Philippe Hammann, Johana Chicher, Sébastien Pfeffer
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0228073

lillies: An R package for the estimation of excess Life Years Lost among patients with a given disease or condition
Cited by: 33
Author(s): Oleguer Plana‐Ripoll, Vladimir Canudas-Romo, Nanna Weye, Thomas Munk Laursen, John J. McGrath, Per Kragh Andersen
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0255313

Competing risk of mortality in association studies of non-fatal events
Cited by: 6
Author(s): Petra Bùžková
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0250758

Comprehensive at-arrival transcriptomic analysis of post-weaned beef cattle uncovers type I interferon and antiviral mechanisms associated with bovine respiratory disease mortality
Cited by: 9
Author(s): Matthew A. Scott, Amelia R. Woolums, Cyprianna E. Swiderski, Andy D. Perkins, Bindu Nanduri, David R. Smith, Brandi B. Karisch, William B. Epperson, J. R. Blanton
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0247458

Network dynamics of momentary affect states and future course of psychopathology in adolescents
Cited by: 5
Author(s): Anna Kuranova, Johanna T. W. Wigman, Claudia Menne-Lothmann, Jeroen Decoster, Ruud van Winkel, Philippe Delespaul, Marjan Drukker, Marc De Hert, Cathérine Derom, Evert Thiery, Bart P. F. Rutten, Nele Jacobs, Jim van Os, Albertine J. Oldehinkel, Sanne H. Booij, Marieke Wichers
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.ppat.1009572

Immunity onset alters plant chromatin and utilizes EDA16 to regulate oxidative homeostasis
Cited by: 10
Author(s): Alonso Javier Pardal, Sophie J. M. Piquerez, Ana Dominguez-Ferreras, Lucas Frungillo, Emmanouil Mastorakis, Emma Reilly, David Latrasse, Lorenzo Concia, Selena Giménez-Ibáñez, Steven H. Spoel, Moussa Benhamed, Vardis Ntoukakis
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.ppat.1009603

Characterisation of the Semliki Forest Virus-host cell interactome reveals the viral capsid protein as an inhibitor of nonsense-mediated mRNA decay
Cited by: 20
Author(s): Lara Contu, Giuseppe Balistreri, Michal Domanski, Anne-Christine Uldry, Oliver Mühlemann
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0253864

The KrasG12D;Trp53fl/fl murine model of undifferentiated pleomorphic sarcoma is macrophage dense, lymphocyte poor, and resistant to immune checkpoint blockade
Cited by: 3
Author(s): Karys Hildebrand, Arvind K. Singla, Reid McNeil, Kayla L. Marritt, Kurt Hildebrand, Franz J. Zemp, Jahanara Rajwani, Doha Itani, Pinaki Bose, Douglas J. Mahoney, Frank R. Jirik, Michael J. Monument
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0253511

Creating the funerary landscape of Eastern Sudan
Cited by: 12
Author(s): Stefano Costanzo, Filippo Brandolini, Habab Idriss Ahmed, Andrea Zerboni, Andrea Manzo
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.ppat.1009647

Sustained viremia suppression by SHIVSF162P3CN-recalled effector-memory CD8+ T cells after PD1-based vaccination
Cited by: 1
Author(s): Yik Chun Wong, Liu Wan, Lok Yan Yim, Xin Li, Hui Wang, Yue Ming, Mang Niu, Lin Cheng, Liuyi Ling, Yanhua Du, Samantha M. Y. Chen, Kmc Cheung, Haibo Wang, Xian Tang, Jiansong Tang, Haoji Zhang, You‐Qiang Song, Lisa A. Chakrabarti, Zhiwei Chen
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0228964

Genetic characteristics of Jiaji Duck by whole genome re-sequencing
Cited by: 7
Author(s): Lihong Gu, Wang Feng, Zhemin Lin, Tieshan Xu, Dajie Lin, Manping Xing, Shuo Yang, Zhe Chao, Baoguo Ye, Licong Peng, Chunhui Hui, Lizhi Liu, Shuisheng Hou
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0252501

A clinical diabetes risk prediction model for prediabetic women with prior gestational diabetes
Cited by: 8
Author(s): Bernice Man, Alan Schwartz, Oksana Pugach, Yinglin Xia, Ben S. Gerber
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0227528

Morphologically and physiologically diverse fruits of two Lepidium species differ in allocation of glucosinolates into immature and mature seed and pericarp
Cited by: 3
Author(s): Said Mohammed, Samik Bhattacharya, Matthias Alexander Gesing, Katharina Klupsch, Günter Theißen, Klaus Mummenhoff, Caroline Müller
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0240269

Using association rule mining to jointly detect clinical features and differentially expressed genes related to chronic inflammatory diseases
Cited by: 6
Author(s): Rosana Veroneze, Sâmia Cruz Tfaile Corbi, Bárbara Roque da Silva, Cristiane S. Rocha, Cláudia Vianna Maurer-Morelli, Silvana Regina Perez Orrico, Joni Augusto Cirelli, Fernando J. Von Zuben, Raquel Mantuaneli Scarel‐Caminaga
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0252528

Prevalence and characteristics of childfree adults in Michigan (USA)
Cited by: 14
Author(s): Jennifer Watling Neal, Zachary P. Neal
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0247041

16S rRNA gene sequencing of rectal swab in patients affected by COVID-19
Cited by: 32
Author(s): Antonio Mazzarelli, Maria Letizia Giancola, Anna Farina, Luisa Marchioni, Martina Rueca, Cesare Ernesto Maria Gruber, Barbara Bartolini, Tommaso Ascoli Bartoli, Gaetano Maffongelli, Maria Rosaria Capobianchi, Giuseppe Ippolito, Antonino Di, Emanuele Nicastri, Valerio Pazienza
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0256464

Risk factors for treatment failure in women with uncomplicated lower urinary tract infection
Cited by: 2
Author(s): Romain Martischang, Maciek Godycki-Ćwirko, Anna Kowalczyk, Katarzyna Kosiek, ‪Adi Turjeman‬‏, Tanya Babich, Shachaf Shiber, Leonard Leibovici, Elodie von Dach, Stéphan Juergen Harbarth, Angela Huttner
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pntd.0009813

Morphological, molecular and MALDI-TOF MS identification of ticks and tick-associated pathogens in Vietnam
Cited by: 9
Author(s): Ly Na Huynh, Adama Zan Diarra, Quang Luan Pham, Nhiem Le-Viet, Jean-Michel Bérenger, Van Hoang Ho, Xuan Quang Nguyen, Philippe Parola
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.ppat.1009723

ACE2-lentiviral transduction enables mouse SARS-CoV-2 infection and mapping of receptor interactions
Cited by: 17
Author(s): Daniel J. Rawle, Thuy T. Le, Troy Dumenil, Kexin Yan, Bing Tang, Wilson Nguyen, Daniel Watterson, Naphak Modhiran, Jody Hobson‐Peters, Cameron Bishop, Andreas Suhrbier
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0224362

Implementation and effectiveness of non-specialist mediated interventions for children with Autism Spectrum Disorder: A systematic review and meta-analysis
Cited by: 19
Author(s): Naveed Sattar, Ahmed Waqas, Afshan Naz Amray, Raheel Imtiaz Memon, Nisma Javed, Muhammad A. Tahir, Sherief Ghozy, Nusrat Jahan, Anum Saeed Khan, Atıf Rahman
Software Mentions: 3
Published: about 7 years ago

10.1371/journal.ppat.1009494

The multi-functional reovirus σ3 protein is a virulence factor that suppresses stress granule formation and is associated with myocardial injury
Cited by: 14
Author(s): Yingying Guo, Meleana M. Hinchman, Mercedes Lewandrowski, Shaun T. Cross, Danica M. Sutherland, Olivia L. Welsh, Terence S. Dermody, John S. L. Parker
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0229192

Beef cattle that respond differently to fescue toxicosis have distinct gastrointestinal tract microbiota
Cited by: 16
Author(s): Lucas R Koester, Daniel Poole, Nick V. L. Serão, Stephan Schmitz‐Esser
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0224030

Hippocampal subfield volumes and pre-clinical Alzheimer’s disease in 408 cognitively normal adults born in 1946
Cited by: 20
Author(s): Thomas D. Parker, David M. Cash, Christopher A. Lane, Kirsty Lu, Ian B. Malone, Jennifer M. Nicholas, Sarah‐Naomi James, Ashvini Keshavan, Heidi Murray‐Smith, Andrew Wong, Sarah M Buchanan, Sarah E Keuss, Carole H. Sudre, Marc Modat, David L. Thomas, Sebastian J. Crutch, Marcus Richards, Nick C. Fox, Jonathan M. Schott
Software Mentions: 3
Published: about 7 years ago

10.1371/journal.pone.0245008

Effectiveness of COVID-19 shelter-in-place orders varied by state
Cited by: 24
Author(s): Yevgeniy Feyman, Jacob Bor, Julia Raifman, Kevin N. Griffith
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0244816

Objective Structured Assessment of Debriefing (OSAD) in simulation-based medical education: Translation and validation of the German version
Cited by: 6
Author(s): Sandra Abegglen, Andrea Krieg, Helen Eigenmann, Robert Greif
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.ppat.1009772

Signatures in SARS-CoV-2 spike protein conferring escape to neutralizing antibodies
Cited by: 68
Author(s): Marta Alenquer, Filipe Ferreira, Diana Lousa, Mariana Valério, Mónica Medina-Lopes, Marie‐Louise Bergman, Juliana Gonçalves, Jocelyne Demengeot, Ricardo B. Leite, Jingtao Lilue, Zemin Ning, Carlos Penha‐Gonçalves, Helena Soares, Cláudio M. Soares, Maria João Amorim
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0236153

Does mathematics training lead to better logical thinking and reasoning? A cross-sectional assessment from students to professors
Cited by: 14
Author(s): Clio Cresswell, Craig Speelman
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0242271

Publication rates from biomedical and behavioral and social science R01s funded by the National Institutes of Health
Cited by: 3
Author(s): William T. Riley, Katrina Bibb, Sara L. Hargrave, Paula Fearon
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0228736

Prognostic value of the myocardial salvage index measured by T2-weighted and T1-weighted late gadolinium enhancement magnetic resonance imaging after ST-segment elevation myocardial infarction: A systematic review and meta-regression analysis
Cited by: 11
Author(s): Benjamin Kendziora, Marc Dewey
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0227580

Assessment of publication bias and outcome reporting bias in systematic reviews of health services and delivery research: A meta-epidemiological study
Cited by: 26
Author(s): Abimbola Ayorinde, Iestyn Williams, Russell Mannion, Fujian Song, Magdalena Skrybant, Richard Lilford, Yen-Fu Chen
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0240047

Analysis of data dictionary formats of HIV clinical trials
Cited by: 6
Author(s): Craig S. Mayer, Nick Williams, Vojtech Huser
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0243305

New sulphonamide pyrolidine carboxamide derivatives: Synthesis, molecular docking, antiplasmodial and antioxidant activities
Cited by: 6
Author(s): Efeturi A. Onoabedje, Akachukwu Ibezim, Uchechukwu C. Okoro, Sanjay Batra
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0241174

Comprehensive analysis of differential expression profiles via transcriptome sequencing in SH-SY5Y cells infected with CV-A16
Cited by: 1
Author(s): Yuanliang Hu, Yang Zhen, Shenglan Wang, Danxiong Sun, Mi Zhong, Mudong Wen, Longding Liu, Yunhui Zhang
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0249769

Artificial intelligence based writer identification generates new evidence for the unknown scribes of the Dead Sea Scrolls exemplified by the Great Isaiah Scroll (1QIsaa)
Cited by: 12
Author(s): Mladen Popović, Maruf A. Dhali, Lambert Schomaker
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0229600

Differential effects of habitat loss on occupancy patterns of the eastern green lizard Lacerta viridis at the core and periphery of its distribution range
Cited by: 4
Author(s): Ana María Prieto-Ramirez, Leonie Röhler, Anna F. Cord, Guy Pe’er, Dennis Rödder, Klaus Henle
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0253446

Knowledge and preventive practices towards COVID-19 among pregnant women seeking antenatal services in Northern Ghana
Cited by: 21
Author(s): Maxwell Tii Kumbeni, Paschal Awingura Apanga, Eugene Osei Yeboah, Isaac Bador Kamal Lettor
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0244409

Impact of natural disasters on consumer behavior: Case of the 2017 El Niño phenomenon in Peru
Cited by: 5
Author(s): Hugo Alatrista-Salas, Vincent Gauthier, Miguel Núñez-del-Prado, Monique Becker
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0257533

District level correlates of COVID-19 pandemic in India during March-October 2020
Cited by: 17
Author(s): Vandana Tamrakar, Ankita Srivastava, Nandita Saikia, Mukesh Parmar, Sudheer Kumar Shukla, Shewli Shabnam, Bandita Boro, Apala Saha, Benjamin Debbarma
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0243053

Interference control in working memory: Evidence for discriminant validity between removal and inhibition tasks
Cited by: 6
Author(s): Alodie Rey-Mermet, Krishneil A. Singh, Gilles E. Gignac, Christopher Brydges, Ullrich K. H. Ecker
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0247871

Aspirin desensitization in NSAID-exacerbated respiratory disease and its outcomes in the clinical course of asthma: A systematic review of the literature and meta-analysis
Cited by: 3
Author(s): Isabel Eraso, Saveria Sangiovanni, Eliana I. Morales, Liliana Fernández‐Trujillo
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0227002

Disruption in daily eating-fasting and activity-rest cycles in Indian adolescents attending school
Cited by: 8
Author(s): Neelu Gupta, Akansha Khare
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0245527

The invasive longhorn beetle Xylotrechus chinensis, pest of mulberries, in Europe: Study on its local spread and efficacy of abamectin control
Cited by: 9
Author(s): Víctor Sarto i Monteys, Adrià Costa Ribes, Ivan Savin
Software Mentions: 2
Published: almost 6 years ago