Ecosyste.ms: Papers

10.1371/journal.pone.0227379

Comparison of balance changes after inspiratory muscle or Otago exercise training
Cited by: 21
Author(s): Francesco Vincenzo Ferraro, James Gavin, Tom Wainwright, Alison McConnell
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0239938

Severity of bovine tuberculosis is associated with innate immune-biased transcriptional signatures of whole blood in early weeks after experimental Mycobacterium bovis infection
Cited by: 6
Author(s): Jayne E Wiarda, Paola M. Boggiatto, Darrell O. Bayles, W. Ray Waters, Tyler C. Thacker, Mitchell V. Palmer
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0253385

Hyperspectral band selection and modeling of soil organic matter content in a forest using the Ranger algorithm
Cited by: 6
Author(s): Yuanyuan Shi, Junyu Zhao, Xianchong Song, Zuoyu Qin, Lichao Wu, Huili Wang, Jian Tang
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0231317

Predictive validity in middle childhood of short tests of early childhood development used in large scale studies compared to the Bayley-III, the Family Care Indicators, height-for-age, and stunting: A longitudinal study in Bogota, Colombia
Cited by: 17
Author(s): Marta Rubio‐Codina, Sally Grantham‐McGregor
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0230029

Dredging activity and associated sound have negligible effects on adult Atlantic sturgeon migration to spawning habitat in a large coastal river
Cited by: 8
Author(s): Matthew T. Balazik, Michael Barber, Safra Altman, Kevin J. Reine, Alan Katzenmeyer, Aaron J. Bunch, Greg C. Garman
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0248774

Antenatal corticosteroids for impending late preterm (34-36+6 weeks) deliveries—A systematic review and meta-analysis of RCTs
Cited by: 22
Author(s): Mangesh Deshmukh, Sanjay Patole
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0220096

Modelling vegetation understory cover using LiDAR metrics
Cited by: 21
Author(s): Lisa Venier, Tom Swystun, Marc J. Mazerolle, David P. Kreutzweiser, Kerrie L. Wainio-Keizer, Ken A. McIlwrick, Murray Woods, Xianli Wang
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0238311

Length of stay to recover from severe acute malnutrition and associated factors among under-five years children admitted to public hospitals in Aksum, Ethiopia
Cited by: 10
Author(s): Wagnew Tesfay, Mebrahtu Abay, Solomon Hintsa, Tekia Zafu
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0246915

Experimental and molecular predictions of the adjuvanticity of snail mucin on hepatitis B vaccine in albino mice
Cited by: 2
Author(s): Parker Elijah Joshua, Cynthia Ogochukwu Nwauzor, Damian Chukwu Odimegwu, Uzochukwu Gospel Ukachukwu, Rita Onyekachukwu Asomadu, Timothy Prince Chidike Ezeorba
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0256074

Experience and lessons learned from multi-modal internet-based recruitment of U.S. Vietnamese into research
Cited by: 10
Author(s): Milkie Vu, Victoria N. Huynh, Robert A. Bednarczyk, Cam Escoffery, Danny Ta, Tien Thi Kieu Nguyen, Carla J. Berg
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0226833

Effects of Allium hookeri on gut microbiome related to growth performance in young broiler chickens
Cited by: 15
Author(s): Sung-Hyen Lee, Sohyun Bang, Hyejeong Jang, Eun-Byeol Lee, Bong-Sang Kim, Seung-Hwan Kim, Sang-Hyun Kang, Kyung-Woo Lee, Dong-Wook Kim, Jung-Bong Kim, Jeong‐Sook Choe, Shin-Young Park, Hyun S. Lillehoj
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0224676

Molecular epidemiological characteristics of dengue virus carried by 34 patients in Guangzhou in 2018
Cited by: 2
Author(s): Feng Liao, Huini Chen, Jieliang Xie, Shaofeng Zhan, Pan Pan, Zizhao Lao, Yaohua Fan, L. C.-C. Lin, Yunfeng Lai, Shuangfeng Lin, Jianguo Wu, Xiaohong Liu, Geng Li
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0242063

Inventive nesting behaviour in the keyhole wasp Pachodynerus nasidens Latreille (Hymenoptera: Vespidae) in Australia, and the risk to aviation safety
Cited by: 3
Author(s): Alan House, Jackson G. Ring, Phillip P. Shaw
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0242544

Colonization with multi-drug-resistant organisms negatively impacts survival in patients with non-small cell lung cancer
Cited by: 9
Author(s): Jan Stratmann, Raphael Lacko, Olivier Balló, Shabnam Shaid, Wolfgang Gleiber, Maria J. G. T. Vehreschild, Thomas A. Wichelhaus, Claudia Reinheimer, Stephan Göttig, Volkhard A. J. Kempf, Peter Kleine, Susanne Stera, Christian Brandts, Martin Sebastian, Sebastian E. Koschade
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0243779

Integrating economic measures of adaptation effectiveness into climate change interventions: A case study of irrigation development in Mwea, Kenya
Cited by: 6
Author(s): Daiju Narita, Ichiro Sato, Daikichi Ogawada, Akiko Matsumura
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pone.0225246

Genetic and morphological divergence in the warm-water planktonic foraminifera genus Globigerinoides
Cited by: 33
Author(s): Raphaël Morard, Angelina Füllberg, G.J.A. Brummer, Mattia Greco, Lukas Jonkers, André Wizemann, Agnes Weiner, Kate Darling, Michael Siccha, Ronan Ledevin, Hiroshi Kitazato, Thibault de Garidel‐Thoron, Colomban de Vargas, Michal Kučera
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0235692

Fox dietary ecology as a tracer of human impact on Pleistocene ecosystems
Cited by: 17
Author(s): Chris Baumann, Hervé Bocherens, Dorothée G. Drucker, Nicholas J. Conard
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0233107

Reproducibility of individual effect sizes in meta-analyses in psychology
Cited by: 35
Author(s): Esther Maassen, Marcel A.L.M. van Assen, Michèle B. Nuijten, Anton Olsson-Collentine, Jelte M. Wicherts
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0231976

New insights in the allelopathic traits of different barley genotypes: Middle Eastern and Tibetan wild-relative accessions vs. cultivated modern barley
Cited by: 16
Author(s): Mauro Maver, Begoña Miras-Moreno, Luigi Lucini, Marco Trevisan, Youry Pii, Stefano Cesco, Tanja Mimmo
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0223294

Distinctive tasks of different cyanobacteria and associated bacteria in carbon as well as nitrogen fixation and cycling in a late stage Baltic Sea bloom
Cited by: 13
Author(s): Falk Eigemann, Angela Vogts, Maren Voß, Luca Zoccarato, Heide N. Schulz-Vogt
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pmed.1003498

Polygenic risk scores in cardiovascular risk prediction: A cohort study and modelling analyses
Cited by: 83
Author(s): Luanluan Sun, Lisa Pennells, Stephen Kaptoge, Christopher P. Nelson, Scott C. Ritchie, Gad Abraham, Matthew Arnold, Steven Bell, Thomas Bolton, Stephen Burgess, Frank Dudbridge, Qi Guo, Eleni Sofianopoulou, David P. Stevens, John R. Thompson, Adam S. Butterworth, Angela Wood, John Danesh, Nilesh J. Samani, Michael Inouye, Emanuele Di Angelantonio
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pntd.0008234

Whole genome sequencing of Plasmodium vivax isolates reveals frequent sequence and structural polymorphisms in erythrocyte binding genes
Cited by: 20
Author(s): Anthony M. Ford, Daniel Kepple, Beka Raya Abagero, Jordan Connors, Richard D. Pearson, Sarah Auburn, Sisay Getachew, Colby T. Ford, Karthigayan Gunalan, Louis H. Miller, Daniel Janies, Julian C. Rayner, Guiyun Yan, Delenasaw Yewhalaw, Eugenia Lo
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0233041

Unmasking individual differences in adult reading procedures by disrupting holistic orthographic perception
Cited by: 2
Author(s): Elizabeth A. Hirshorn, Travis Simcox, Corrine Durisko, Charles A. Perfetti, Julie A. Fiez
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0233890

Risk of eczema, wheezing and respiratory tract infections in the first year of life: A systematic review of vitamin D concentrations during pregnancy and at birth
Cited by: 7
Author(s): Muzaitul Akma Mustapa Kamal Basha, Hazreen Abdul Majid, Nuguelis Razali, Abqariyah Yahya
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0227665

Determining hydrological flow paths to enhance restoration in impaired mangrove wetlands
Cited by: 17
Author(s): Rosela Pérez-Ceballos, Arturo Zaldívar-Jiménez, Julio Canales-Delgadillo, Haydée López-Adame, Jorge López‐Portillo, Martín Merino–Ibarra
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0251073

Risk-taking unmasked: Using risky choice and temporal discounting to explain COVID-19 preventative behaviors
Cited by: 26
Author(s): Kaileigh A. Byrne, Stephanie G. Six, Reza Ghaiumy Anaraky, Maggie W. Harris, Emma Winterlind
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0226418

The Intersection of Human Disturbance and Diel Activity, with Potential Consequences on Trophic Interactions
Cited by: 10
Author(s): Michael A. Patten, Jutta C. Burger, Milan Mitrovich
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0227244

Significance-based multi-scale method for network community detection and its application in disease-gene prediction
Cited by: 3
Author(s): Ke Hu, Xu Ju, Yun-Xia Yu, Liang Tang, Xiang Qin, Jianming Li, Yonghong Tang, Yongjun Chen, Yan Zhang
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0246718

The role of clustering algorithm-based big data processing in information economy development
Cited by: 2
Author(s): Hongyan Ma
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0251863

Effect of exercise training on heart rate variability in type 2 diabetes mellitus patients: A systematic review and meta-analysis
Cited by: 26
Author(s): M. Émile Picard, Igor Tauveron, Salwan Magdasy, Thomas Benichou, Reza Bagheri, Ukadike C. Ugbolue, Valentin Navel, Frédéric Dutheil
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0255515

Trade informativeness and liquidity in Bitcoin markets
Cited by: 2
Author(s): J. Christopher Westland
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0240032

Evaluating the quality of evidence for gaming disorder: A summary of systematic reviews of associations between gaming disorder and depression or anxiety
Cited by: 17
Author(s): Michelle Colder Carras, Jing Shi, Gregory Hard, Ian J. Saldanha
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0237055

Genome-wide binding analysis of 195 DNA binding proteins reveals “reservoir” promoters and human specific SVA-repeat family regulation
Cited by: 1
Author(s): Michael J. Smallegan, Soraya I. Shehata, Savannah Spradlin, Alison R. Swearingen, Graycen E. Wheeler, Arpan Das, Giulia A Corbet, Benjamin Nebenfuehr, Daniel Ahrens, Devin Tauber, Shelby R. Lennon, Kevin Choi, Thao Ngoc Huynh, Tom Wieser, Kristen Schneider, Michael S. Bradshaw, Joel Basken, Maria Eliana Lai, Timothy D. Read, Matt Hynes-Grace, Dan Timmons, Jon Demasi, John L. Rinn
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0243423

Detection of fish movement patterns across management unit boundaries using age-structured Bayesian hierarchical models with tag-recovery data
Cited by: 1
Author(s): Rujia Bi, Can Zhou, Yan Jiao
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.ppat.1009572

Immunity onset alters plant chromatin and utilizes EDA16 to regulate oxidative homeostasis
Cited by: 10
Author(s): Alonso Javier Pardal, Sophie J. M. Piquerez, Ana Dominguez-Ferreras, Lucas Frungillo, Emmanouil Mastorakis, Emma Reilly, David Latrasse, Lorenzo Concia, Selena Giménez-Ibáñez, Steven H. Spoel, Moussa Benhamed, Vardis Ntoukakis
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.ppat.1009647

Sustained viremia suppression by SHIVSF162P3CN-recalled effector-memory CD8+ T cells after PD1-based vaccination
Cited by: 1
Author(s): Yik Chun Wong, Liu Wan, Lok Yan Yim, Xin Li, Hui Wang, Yue Ming, Mang Niu, Lin Cheng, Liuyi Ling, Yanhua Du, Samantha M. Y. Chen, Kmc Cheung, Haibo Wang, Xian Tang, Jiansong Tang, Haoji Zhang, You‐Qiang Song, Lisa A. Chakrabarti, Zhiwei Chen
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0247458

Network dynamics of momentary affect states and future course of psychopathology in adolescents
Cited by: 5
Author(s): Anna Kuranova, Johanna T. W. Wigman, Claudia Menne-Lothmann, Jeroen Decoster, Ruud van Winkel, Philippe Delespaul, Marjan Drukker, Marc De Hert, Cathérine Derom, Evert Thiery, Bart P. F. Rutten, Nele Jacobs, Jim van Os, Albertine J. Oldehinkel, Sanne H. Booij, Marieke Wichers
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0232397

Correlation between musculoskeletal structure of the hand and primate locomotion: Morphometric and mechanical analysis in prehension using the cross- and triple-ratios
Cited by: 6
Author(s): Toshihiro Tamagawa, Torbjörn Lundh, Kenji Shigetoshi, Norihisa Nitta, Noritoshi Ushio, Toshiro Inubushi, Akihiko Shiino, Anders Karlsson, Takayuki Inoue, Yutaka Mera, Kodai Hino, Masaharu Komori, Shigehiro Morikawa, Shuji Sawajiri, Shigeyuki Naka, Satoru Honma, Tomoko Kimura, Yasuhiro Uchimura, Shunsuke Imai, Naoko Egi, Hiroki Otani, Jun Udagawa
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0241990

Rapid assessment of psychological and epidemiological correlates of COVID-19 concern, financial strain, and health-related behavior change in a large online sample
Cited by: 116
Author(s): Benjamin W Nelson, Adam Pettitt, Jessica Flannery, Nicholas Allen
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0254189

Transcriptome analysis of bread wheat leaves in response to salt stress
Cited by: 19
Author(s): Nazanin Amirbakhtiar, Ahmad Ismaili, Mohammad Reza Ghaffari, Raheleh Mirdar Mansuri, Sepideh Sanjari, Zahra‐Sadat Shobbar
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0236197

Family-based exome sequencing combined with linkage analyses identifies rare susceptibility variants of MUC4 for gastric cancer
Cited by: 3
Author(s): Young-Wook Choi, Jung Hun Ohn, Nayoung Kim, Wonji Kim, Kyungtaek Park, Sungho Won, Lee Sael, Cheol Min Shin, Sun Min Lee, Sejoon Lee, Hyun Joo An, Dong Man Jang, Byung Woo Han, Hye Seung Lee, Seung Joo Kang, Sang Woo Kim, Dong Hoon Lee
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0234511

Effectiveness and optimal dosage of exercise training for chronic non-specific neck pain: A systematic review with a narrative synthesis
Cited by: 27
Author(s): Jonathan Price, Alison Rushton, I. Tyros, Vasileios Tyros, Nicola R Heneghan
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0251630

Framing the potential of public frameshift peptides as immunotherapy targets in colon cancer
Cited by: 3
Author(s): Ide Spaanderman, Fleur S. Peters, Aldo Jongejan, E. Redeker, Cornelis J.A. Punt, Adriaan D. Bins
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0250495

Willingness to vaccinate against COVID-19 among Bangladeshi adults: Understanding the strategies to optimize vaccination coverage
Cited by: 149
Author(s): Minhazul Abedin, Mohammad Aminul Islam, Fashiur Rahman, Hasan Mahmud Reza, Mohammad Zakir Hossain, Mohammad Anwar Hossain, Adittya Arefin, Ahmed Hossain
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0253911

When research is me-search: How researchers’ motivation to pursue a topic affects laypeople’s trust in science
Cited by: 5
Author(s): Marlene Sophie Altenmüller, Leonie Lucia Lange, Mario Gollwitzer
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0227593

Mapping the coevolution, leadership and financing of research on viral vectors, RNAi, CRISPR/Cas9 and other genomic editing technologies
Cited by: 3
Author(s): David Fajardo-Ortiz, Annie Shattuck, Stefan Hornbostel
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0231753

Genome-wide assessment of population structure and genetic diversity of Chinese Lou onion using specific length amplified fragment (SLAF) sequencing
Cited by: 9
Author(s): Haitian Fang, Huiyan Liu, Ruoshuang Ma, Yuxuan Liu, Jinna Li, Xiaoyan Yu, Haoyu Zhang, Yali Yang, Zhang Guang-di
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0243250

Medical students in distress: The impact of gender, race, debt, and disability
Cited by: 27
Author(s): Nikhil Rajapuram, Simone Langness, Megan Marshall, Amanda Sammann
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pone.0223992

To tweet or not to tweet, that is the question: A randomized trial of Twitter effects in medical education
Cited by: 10
Author(s): Lauren A. Maggio, Todd C. Leroux, Anthony R. Artino
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0255815

Phase and power modulations on the amplitude of TMS-induced motor evoked potentials
Cited by: 11
Author(s): Lukas Schilberg, Sanne ten Oever, Teresa Schuhmann, Alexander T. Sack
Software Mentions: 3
Published: about 3 years ago

10.1371/journal.pone.0244734

Multi-criteria suitability analysis for neglected and underutilised crop species in South Africa
Cited by: 13
Author(s): Hillary Mugiyo, Vimbayi G. P. Chimonyo, Mbulisi Sibanda, Richard Kunz, Luxon Nhamo, Cecelia R. Masemola, Caroline Dalin, Albert T. Modi, Tafadzwanashe Mabhaudhi
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pone.0242723

A thorough analysis of the contribution of experimental, derived and sequence-based predicted protein-protein interactions for functional annotation of proteins
Cited by: 1
Author(s): Stavros Makrodimitris, Marcel J. T. Reinders, Roeland van Ham
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0238372

Disadvantages in preparing and publishing scientific papers caused by the dominance of the English language in science: The case of Colombian researchers in biological sciences
Cited by: 131
Author(s): Valeria Ramírez‐Castañeda
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0244860

Regional anesthesia educational material utilization varies by World Bank income category: A mobile health application data study
Cited by: 3
Author(s): Vanessa Moll, Edward R. Mariano, Jamie Kitzman, Vikas N O’Reilly-Shah, Craig S. Jabaley
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pone.0237356

DESS deconstructed: Is EDTA solely responsible for protection of high molecular weight DNA in this common tissue preservative?
Cited by: 7
Author(s): Amy Sharpe, S. Barrios, Sarah Gayer, Elisha Allan-Perkins, David Stein, Hannah J Appiah-Madson, Rosalia Falco, Daniel L. Distel
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0243785

Systematic review and meta-analysis of late auditory evoked potentials as a candidate biomarker in the assessment of tinnitus
Cited by: 16
Author(s): Emilie Cardon, Iris Joossen, Hanne Vermeersch, Laure Jacquemin, Griet Mertens, Olivier M. Vanderveken, Vedat Topsakal, Paul Van de Heyning, Vincent Van Rompaey, Annick Gilles
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pone.0245687

The Epidemiology of first and second-line drug-resistance Mycobacterium tuberculosis complex common species: Evidence from selected TB treatment initiating centers in Ethiopia
Cited by: 11
Author(s): Biniyam Dagne, Kassu Desta, Rahel Fekade, Misikir Amare, Mekonnen Tadesse, Getu Diriba, Betselot Zerihun, Melak Getu, Waganeh Sinshaw, Getachew Seid, Dinka Fekadu Gamtesa, Gebeyehu Assefa, Ayinalem Alemu
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pone.0256784

Immunometabolic signatures predict risk of progression to sepsis in COVID-19
Cited by: 19
Author(s): Ana Sofía Herrera-Van Oostdam, Julio Enrique Castañeda-Delgado, Juan José Oropeza-Valdez, Juan Carlos Borrego, Joel Monárrez‐Espino, Jiamin Zheng, Rupasri Mandal, Lun Zhang, Elizabeth Soto-Guzmán, Julio César Fernández-Ruiz, Fátima de Lourdes Ochoa-González, Flor María Trejo Medinilla, Jesús Adrián López, David S. Wishart, José Antonio Enciso-Moreno, Yamilé López‐Hernández
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0257639

Examining the impact of a community-based exercise intervention on cardiorespiratory fitness, cardiovascular health, strength, flexibility and physical activity among adults living with HIV: A three-phased intervention study
Cited by: 9
Author(s): Kelly K O’Brien, Aileen M. Davis, Soo Chan Carusone, Lisa Avery, Ada Tang, Patricia Solomon, Rachel Aubry, Mehdi Zobeiry, Ivan Ilić, Zoran Pandovski, Ahmed M. Bayoumi
Software Mentions: 3
Published: about 3 years ago

10.1371/journal.pone.0246167

Evidence and magnitude of the effects of meteorological changes on SARS-CoV-2 transmission
Cited by: 12
Author(s): Adam I. Kaplin, Caesar Junker, Anupama Kumar, Mary Anne Ribeiro, Eileen Yu, Michael Wang, Ted Smith, N. Shesh, Aruni Bhatnagar
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pone.0233920

Smooth operator: Modifying the Anhøj rules to improve runs analysis in statistical process control
Cited by: 3
Author(s): Jacob Anhøj, Tore Wentzel‐Larsen
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0248342

A comprehensive molecular characterization of the 8q22.2 region reveals the prognostic relevance of OSR2 mRNA in muscle invasive bladder cancer
Cited by: 4
Author(s): Daniel Uysal, Karl‐Friedrich Kowalewski, Maximilian C. Kriegmair, Ralph M. Wirtz, Zoran V. Popović, Philipp Erben
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0256152

Radiomics machine learning study with a small sample size: Single random training-test set split may lead to unreliable results
Cited by: 26
Author(s): Chansik An, Yae Won Park, Sung Soo Ahn, Kyunghwa Han, Hwiyoung Kim, Seung Koo Lee
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pgen.1009805

A broad analysis of splicing regulation in yeast using a large library of synthetic introns
Cited by: 11
Author(s): Dvir Schirman, Zohar Yakhini, Yitzhak Pilpel, Orna Dahan
Software Mentions: 3
Published: about 3 years ago

10.1371/journal.pone.0225762

Systematic review and meta-analysis comparing Adjustable Transobturator Male System (ATOMS) and Adjustable Continence Therapy (ProACT) for male stress incontinence
Cited by: 19
Author(s): Javier C. Angulo, Sandra Schönburg, Alessandro Giammò, Francisco J. Abellán, I. Arance, David Lora
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0255166

Environmental non-governmental organizations and air-pollution governance: Empirical evidence from OECD countries
Cited by: 7
Author(s): Guangqin Li, He Qiang, Dongmei Wang, Bofan Liu
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pgen.1009811

A Bayesian network approach incorporating imputation of missing data enables exploratory analysis of complex causal biological relationships
Cited by: 10
Author(s): Richard Howey, Alexander D. Clark, Najib Naamane, Louise N. Reynard, Arthur G. Pratt, Heather J. Cordell
Software Mentions: 3
Published: about 3 years ago

10.1371/journal.pone.0243772

Phenotypical antimicrobial resistance data of clinical and non-clinical Escherichia coli from poultry in Germany between 2014 and 2017
Cited by: 8
Author(s): Octavio Mesa-Varona, Heike Kaspar, Mirjam Grobbel, Bernd‐Alois Tenhagen
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pgen.1008591

The conserved transcriptional regulator CdnL is required for metabolic homeostasis and morphogenesis in Caulobacter
Cited by: 13
Author(s): Selamawit Abi Woldemeskel, Allison K. Daitch, Laura Álvarez, Gaël Panis, Rilee Zeinert, Diego González, Erika Smith, Justine Collier, Peter Chien, Felipe Cava, Patrick H. Viollier, Erin D. Goley
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0238175

Time-series transcriptomic analysis reveals novel gene modules that control theanine biosynthesis in tea plant (Camellia sinensis)
Cited by: 2
Author(s): Haisheng Cao, Xiaolong He, Jinke Du, Rui Zhang, Ying Chen, Yan Ma, Qi Chen, Congbing Fang, Chi Tang Ho, Shihua Zhang, Xiaochun Wan
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0224632

Mitochondrial dysfunction in rheumatoid arthritis: A comprehensive analysis by integrating gene expression, protein-protein interactions and gene ontology data
Cited by: 22
Author(s): Venugopal Panga, Ashwin Adrian Kallor, Arunima Nair, Shilpa Harshan, Srivatsan Raghunathan
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0234104

Emojis influence autobiographical memory retrieval from reading words: An fMRI-based study
Cited by: 14
Author(s): Christos Chatzichristos, Manuel Morante, Nikolaos Andreadis, Eleftherios Kofidis, Yiannis Kopsinis, Sergios Theodoridis
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0245026

Estimating pulse wave velocity from the radial pressure wave using machine learning algorithms
Cited by: 17
Author(s): Wen Jin, Philip Chowienczyk, Jordi Alastruey
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pgen.1008387

AMPK regulates ESCRT-dependent microautophagy of proteasomes concomitant with proteasome storage granule assembly during glucose starvation
Cited by: 19
Author(s): Jianhui Li, Michal Breker, Morven Graham, Maya Schuldiner, Mark Hochstrasser
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0229456

Repeatability of flatfish reflex impairment assessments based on video recordings
Cited by: 3
Author(s): Sven Sebastian Uhlmann, Noëlle Yochum, Bart Ampe
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pmed.1003100

Metabolic risk factors and incident advanced liver disease in non-alcoholic fatty liver disease (NAFLD): A systematic review and meta-analysis of population-based observational studies
Cited by: 177
Author(s): Helen Jarvis, Dawn Craig, Robert Barker, Gemma Spiers, Daniel Stow, Quentin M. Anstee, Barbara Hanratty
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0245252

Breast self-examination practice and its determinants among women in Ethiopia: A systematic review and meta-analysis
Cited by: 14
Author(s): Yordanos Gizachew Yeshitila, Getachew Mullu Kassa, Selamawit Gebeyehu, Peter Memiah, Melaku Desta
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pmed.1003778

Effectiveness and costs associated with a lay counselor–delivered, brief problem-solving mental health intervention for adolescents in urban, low-income schools in India: 12-month outcomes of a randomized controlled trial
Cited by: 11
Author(s): Kanika Malik, Daniel Michelson, Aoife Doyle, Helen A. Weiss, Giulia Greco, Rooplata Sahu, Eric James, Sonal Mathur, Paulomi M. Sudhir, Michael King, Pim Cuijpers, Bruce F. Chorpita, Christopher G. Fairburn, Vikram Patel
Software Mentions: 3
Published: about 3 years ago

10.1371/journal.pone.0221828

Dietary inulin alters the gut microbiome, enhances systemic metabolism and reduces neuroinflammation in an APOE4 mouse model
Cited by: 73
Author(s): Jared D. Hoffman, Lucille M. Yanckello, George E. Chlipala, Tyler C. Hammond, Scott McCulloch, Ishita Parikh, Sydney Sun, Josh M. Morganti, Stefan J. Green, Ai-Ling Lin
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0242071

Cultural variation in young children’s social motivation for peer collaboration and its relation to the ontogeny of Theory of Mind
Cited by: 6
Author(s): Roman Stengelin, Robert Hepach, Daniel B. M. Haun
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0231942

Putting the microbiota to work: Epigenetic effects of early life antibiotic treatment are associated with immune-related pathways and reduced epithelial necrosis following Salmonella Typhimurium challenge in vitro
Cited by: 4
Author(s): Matheus O. Costa, Janelle M Fouhse, Ana Paula P. Silva, Benjamin P. Willing, John C. S. Harding
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0249309

The male bias of a generically-intended masculine pronoun: Evidence from eye-tracking and sentence evaluation
Cited by: 5
Author(s): Theresa Redl, Stefan Frank, Peter de Swart, H. de Hoop
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pgen.1008673

Pericentromeric heterochromatin is hierarchically organized and spatially contacts H3K9me2 islands in euchromatin
Cited by: 30
Author(s): Yuh Chwen G. Lee, Yuki Ogiyama, Nuno M. C. Martins, Brian J. Beliveau, David Acevedo, Chao-ting Wu, Giacomo Cavalli, Gary H. Karpen
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0228561

Completing Linnaeus’s inventory of the Swedish insect fauna: Only 5,000 species left?
Cited by: 22
Author(s): Fredrik Ronquist, Mattias Forshage, Sibylle Häggqvist, Dave Karlsson, Rasmus Hovmöller, Johannes Bergsten, Kevin C. Holston, Tom Britton, Johan Abenius, B. Andersson, Peter Neerup Buhl, Carl-Cedric Coulianos, Arne Fjellberg, Carl‐Axel Gertsson, Sven Hellqvist, Mathias Jaschhof, Jostein Kjærandsen, Seraina Klopfstein, Sverre Kobro, Andrew D. Liston, Rudolf Meier, Marc A. A. Pollet, Matthias Riedel, Jindřích Roháček, Meike M. Schuppenhauer, Julia Stigenberg, Ingemar Struwe, Taeger Andreas, Sven-Olof Ulefors, Oleksandr Varga, Phil Withers, Ulf Gärdenfors
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0242972

Genetic variability of bioactive compounds and selection for nutraceutical quality in kola [Cola nitida (Vent) Schott. and Endl.]
Cited by: 13
Author(s): Daniel Nyadanu, S. T. Lowor, Abraham Akpertey, Dèdéou Apocalypse Tchokponhoué, P. Pobee, Jerome Agbesi Dogbatse, Daniel Okyere, Frederick Amon-Armah, M. Brako-Marfo
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pone.0247756

How varying parameters impact insecticide resistance bioassay: An example on the worldwide invasive pest Drosophila suzukii
Cited by: 11
Author(s): Lucile Blouquy, Claire Mottet, Jérôme Olivares, Christophe Plantamp, Myriam Siegwart, Benoît Barrès
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pntd.0007997

Heatwaves and dengue outbreaks in Hanoi, Vietnam: New evidence on early warning
Cited by: 22
Author(s): Jian Cheng, Hilary Bambrick, Laith Yakob, Gregor J. Devine, Francesca D. Frentiu, Đỗ Thị Thanh Toàn, Pham Quang Thai, Zhiwei Xu, Wenbiao Hu
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0249313

Fire Acupuncture versus conventional acupuncture to treat spasticity after stroke: A systematic review and meta-analysis
Cited by: 10
Author(s): Xuan Qiu, Yaowen Gao, Zhaoxu Zhang, Sijia Cheng, Shuangmei Zhang
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pmed.1003765

Impact of color-coded and warning nutrition labelling schemes: A systematic review and network meta-analysis
Cited by: 62
Author(s): Jieqiong Song, Mhairi K. Brown, Monique Tan, Graham A. MacGregor, Jacqui Webster, Norm R.C. Campbell, Kathy Trieu, Cliona Ní Mhurchú, Laura K. Cobb, Feng J He
Software Mentions: 3
Published: about 3 years ago

10.1371/journal.pone.0242553

Analysis of biliary MICRObiota in hepatoBILIOpancreatic diseases compared to healthy people [MICROBILIO]: Study protocol
Cited by: 3
Author(s): Fernanda Sayuri do Nascimento, Milena Oliveira Suzuki, João Victor Taba, Vitoria Carneiro de Mattos, Leonardo Zumerkorn Pipek, Eugênia Machado Carneiro D’Albuquerque, Leandro Ryuchi Iuamoto, Alberto Meyer, Wellington Andraus, João Renato Rebello Pinho, Eduardo Guimarães Hourneaux de Moura, João Carlos Setúbal, Luiz Augusto Carneiro-D’Albuquerque
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0230517

Dissociable mappings of tonic and phasic pupillary features onto cognitive processes involved in mental arithmetic
Cited by: 11
Author(s): Russell A. Cohen Hoffing, Nina Lauharatanahirun, Daniel E. Forster, Javier O. Garcia, Jean M. Vettel, Steven M. Thurman
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0242474

Exploring options for reprocessing of N95 Filtering Facepiece Respirators (N95-FFRs) amidst COVID-19 pandemic: A systematic review
Cited by: 19
Author(s): Diptanu Paul, Ayush Gupta, Anand Kumar Maurya
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pntd.0009139

The influence of roads on the fine-scale population genetic structure of the dengue vector Aedes aegypti (Linnaeus)
Cited by: 10
Author(s): Maria Angenica F. Regilme, Thaddeus M. Carvajal, Ann‐Christin Honnen, Divina Amalin, Kozo Watanabe
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pone.0220275

Geographical origin determines responses to salinity of Mediterranean caddisflies
Cited by: 4
Author(s): Mauricio J. Carter, M. Flores, Rodrigo Ramos–Jiliberto
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pgen.1009679

Integrative analysis of genomic variants reveals new associations of candidate haploinsufficient genes with congenital heart disease
Cited by: 16
Author(s): Enrique Audain, Anna Wilsdon, Jeroen Breckpot, Jose M. G. Izarzugaza, Tomas Fitzgerald, Anne‐Karin Kahlert, Alejandro Sifrim, Florian Wünnemann, Yasset Perez‐Riverol, Hashim Abdul‐Khaliq, Mads Bak, Anne S. Bassett, Woodrow Benson, Felix Berger, Ingo Daehnert, Koenraad Devriendt, Sven Dittrich, Piers E.F. Daubeney, Vidu Garg, Karl Hackmann, Kirstin Hoff, Philipp Hofmann, Gregor Dombrowsky, Thomas Pickardt, Ulrike Bauer, Bernard Keavney, Sabine Klaassen, Hans‐Heiner Kramer, Christian R. Marshall, Dianna M. Milewicz, Scott A. LeMaire, Joseph S. Coselli, Michael E. Mitchell, Aoy Tomita‐Mitchell, Siddharth K. Prakash, Karl Stamm, Alexandre F.R. Stewart, Candice K. Silversides, Reiner Siebert, Brigitte Stiller, Jill A. Rosenfeld, Inga Vater, Alex V. Postma, Almuth Caliebe, J. David Brook, Grégor Andelfinger, Matthew E. Hurles, Bernard Thienpont, Lars Allan Larsen, Marc‐Phillip Hitz
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0245550

Indirect questioning methods for sensitive survey questions: Modelling criminal behaviours among a prison population
Cited by: 0
Author(s): Beatriz Cobo, Eva Castillo, Francisca López-Torrecillas, María del Mar Rueda
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pmed.1003188

Ambient air pollution and cause-specific risk of hospital admission in China: A nationwide time-series study
Cited by: 91
Author(s): Jianfeng Gu, Ying Shi, Yifang Zhu, Ning Chen, Haibo Wang, Zongjiu Zhang, Ting Chen
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0237129

Coronavirus testing indicates transmission risk increases along wildlife supply chains for human consumption in Viet Nam, 2013-2014
Cited by: 66
Author(s): Nguyen Quynh Huong, Le T. Duong, Nguyen Van Duc Long, Bach Duc Luu, Alice Latinne, Mathieu Pruvot, Nguyen Thanh Phuong, Le Tin Vinh Quang, Vo Van Hung, Nguyen Thi Lan, Nguyễn Thị Hoa, Phạm Quang Minh, Nguyen Thi Ngọc Diep, Nguyen Van Tung, Van Dang Ky, Scott Roberton, Hoang Bich Thuy, Nguyen Van Duc Long, Martin Gilbert, Leanne Wicker, Jonna A. K. Mazet, Christine K. Johnson, Tracey Goldstein, Alex Tremeau-Bravard, Victoria Ontiveros, Damien O. Joly, Chris Walzer, Amanda E. Fine, Sarah H. Olson
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pgen.1008922

Unified inference of missense variant effects and gene constraints in the human genome
Cited by: 15
Author(s): Yi Huang
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0247444

Attention based GRU-LSTM for software defect prediction
Cited by: 12
Author(s): Hafiz Shahbaz Munir, Shengbing Ren, Mubashar Mustafa, Chaudry Naeem Siddique, Shazib Qayyum
Software Mentions: 3
Published: over 3 years ago