10.1371/journal.pgen.1008720

Eliciting priors and relaxing the single causal variant assumption in colocalisation analyses
Cited by: 144
Author(s): Chris Wallace
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pmed.1003027

Potential gains in life expectancy by attaining daily ambient fine particulate matter pollution standards in mainland China: A modeling study based on nationwide data
Cited by: 87
Author(s): Jinlei Qi, Zengliang Ruan, Zhengmin Qian, Peng Yin, Yin Yang, Bipin Kumar Acharya, Lijun Wang, Hualiang Lin
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0237087

Sequencing and assembly of the Egyptian buffalo genome
Cited by: 10
Author(s): Dina A. El-Khishin, Amr Ageez, Mohamed E. Saad, Amr Ibrahim, Moustafa Shokrof, L. Hassan, Mohamed Abouelhoda
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0253704

A hitchhiker guide to manta rays: Patterns of association between Mobula alfredi, M. birostris, their symbionts, and other fishes in the Maldives
Cited by: 9
Author(s): Aimee E Nicholson-Jack, Joanna L. Harris, Kirsty L. Ballard, Katherine Mary Elizabeth Turner, Guy M. W. Stevens
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0228073

lillies: An R package for the estimation of excess Life Years Lost among patients with a given disease or condition
Cited by: 33
Author(s): Oleguer Plana‐Ripoll, Vladimir Canudas-Romo, Nanna Weye, Thomas Munk Laursen, John J. McGrath, Per Kragh Andersen
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0236193

A genetic model of ivabradine recapitulates results from randomized clinical trials
Cited by: 3
Author(s): Marc‐André Legault, Johanna Sandoval, Sylvie Provost, Amina Barhdadi, Louis‐Philippe Lemieux Perreault, Sonia Shah, R. Thomas Lumbers, Simon de Denus, Benoît Tyl, Jean‐Claude Tardif, Marie‐Pierre Dubé
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0245008

Effectiveness of COVID-19 shelter-in-place orders varied by state
Cited by: 24
Author(s): Yevgeniy Feyman, Jacob Bor, Julia Raifman, Kevin N. Griffith
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pmed.1003498

Polygenic risk scores in cardiovascular risk prediction: A cohort study and modelling analyses
Cited by: 83
Author(s): Luanluan Sun, Lisa Pennells, Stephen Kaptoge, Christopher P. Nelson, Scott C. Ritchie, Gad Abraham, Matthew Arnold, Steven Bell, Thomas Bolton, Stephen Burgess, Frank Dudbridge, Qi Guo, Eleni Sofianopoulou, David P. Stevens, John R. Thompson, Adam S. Butterworth, Angela Wood, John Danesh, Nilesh J. Samani, Michael Inouye, Emanuele Di Angelantonio
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0251827

Multiple spatial reference frames underpin perceptual recalibration to audio-visual discrepancies
Cited by: 8
Author(s): David Watson, Michael A. Akeroyd, Neil W. Roach, Ben S. Webb
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0240062

Phylogenomics from transcriptomic “bycatch” clarify the origins and diversity of avian trypanosomes in North America
Cited by: 7
Author(s): Spencer C. Galen, Janus Borner, Susan L. Perkins, Jason D. Weckstein
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pgen.1008965

Replication of the Salmonella Genomic Island 1 (SGI1) triggered by helper IncC conjugative plasmids promotes incompatibility and plasmid loss
Cited by: 18
Author(s): Kévin Huguet, Nicolas Rivard, Daniel Garneau, Jason Palanee, Vincent Burrus
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0253701

Exposure to dexamethasone modifies transcriptomic responses of free-living stages of Strongyloides stercoralis
Cited by: 3
Author(s): Rutchanee Rodpai, Oranuch Sanpool, Tongjit Thanchomnang, Pokkamol Laoraksawong, Lakkhana Sadaow, Patcharaporn Boonroumkaew, Arporn Wangwiwatsin, Chaisiri Wongkham, Porntip Laummaunwai, Wannaporn Ittiprasert, Paul J Brindley, Pewpan M. Intapan, Wanchai Maleewong
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0237869

Abrupt dietary changes between grass and hay alter faecal microbiota of ponies
Cited by: 13
Author(s): A. Garber, P.M. Hastie, David McGuinness, Pauline Malarange, Jo-Anne Murray
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0239385

Multiple drivers of the COVID-19 spread: The roles of climate, international mobility, and region-specific conditions
Cited by: 36
Author(s): Yasuhiro Kubota, Takayuki Shiono, Buntarou Kusumoto, Junichi Fujinuma
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0237356

DESS deconstructed: Is EDTA solely responsible for protection of high molecular weight DNA in this common tissue preservative?
Cited by: 7
Author(s): Amy Sharpe, S. Barrios, Sarah Gayer, Elisha Allan-Perkins, David Stein, Hannah J Appiah-Madson, Rosalia Falco, Daniel L. Distel
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pmed.1003369

Socioeconomic level and associations between heat exposure and all-cause and cause-specific hospitalization in 1,814 Brazilian cities: A nationwide case-crossover study
Cited by: 32
Author(s): Rongbin Xu, Qi Zhao, Micheline de Sousa Zanotti Stagliorio Coélho, Paulo Hilário Nascimento Saldiva, Michael J. Abramson, Shanshan Li, Hyewon Lee
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0252691

Industrialization as a source of heavy metals and antibiotics which can enhance the antibiotic resistance in wastewater, sewage sludge and river water
Cited by: 42
Author(s): Jakub Hubeny, Monika Harnisz, Ewa Korzeniewska, Martyna Buta, W. Zieliński, Damian Rolbiecki, Joanna Giebułtowicz, Grzegorz Nałęcz‐Jawecki, Grażyna Płaza
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0225064

Arabidopsis TRM5 encodes a nuclear-localised bifunctional tRNA guanine and inosine-N1-methyltransferase that is important for growth
Cited by: 14
Author(s): Qianqian Guo, Pei Qin Ng, Shanshan Shi, Diwen Fan, Jun Li, Jing Zhao, Hua Wang, Rakesh David, Parul Mittal, Quang Trung, Ralph Bock, Ming Zhao, Wenbin Zhou, Iain Searle
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0243936

A prospective study to explore the relationship between MTHFR C677T genotype, physiological folate levels, and postpartum psychopathology in at-risk women
Cited by: 4
Author(s): Emily Morris, Catriona Hippman, Arianne Albert, Caitlin Slomp, Angela Inglis, Prescilla Carrion, Rolan Batallones, Heather Andrighetti, Colin Ross, Roger Dyer, William G. Honer, Jehannine Austin
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0251932

COVID-19 and the kidney: A retrospective analysis of 37 critically ill patients using machine learning
Cited by: 2
Author(s): Anna Laura Herzog, Holger K. von Jouanne-Diedrich, Christoph Wanner, Dirk Weismann, Tobias Schlesinger, Patrick Meybohm, Jan Stumpner
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0238815

Evaluation of strategies using simulation model to control a potential outbreak of highly pathogenic avian influenza among poultry farms in Central Luzon, Philippines
Cited by: 5
Author(s): Roderick T. Salvador, Neil Tanquilut, Rosemarie Macmac, Kannika Na Lampang, Warangkhana Chaisowwong, Dirk U. Pfeiffer, Veerasak Punyapornwithaya
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0257639

Examining the impact of a community-based exercise intervention on cardiorespiratory fitness, cardiovascular health, strength, flexibility and physical activity among adults living with HIV: A three-phased intervention study
Cited by: 9
Author(s): Kelly K O’Brien, Aileen M. Davis, Soo Chan Carusone, Lisa Avery, Ada Tang, Patricia Solomon, Rachel Aubry, Mehdi Zobeiry, Ivan Ilić, Zoran Pandovski, Ahmed M. Bayoumi
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0234673

Evaluation of a large-scale flow manipulation to the upper San Francisco Estuary: Response of habitat conditions for an endangered native fish
Cited by: 11
Author(s): Ted Sommer, Rosemary Hartman, Michal Koller, Michael Koohafkan, J. Louise Conrad, Michael L. MacWilliams, Aaron J. Bever, Christina Burdi, April Hennessy, Michael P. Beakes
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0245026

Estimating pulse wave velocity from the radial pressure wave using machine learning algorithms
Cited by: 17
Author(s): Wen Jin, Philip Chowienczyk, Jordi Alastruey
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0248342

A comprehensive molecular characterization of the 8q22.2 region reveals the prognostic relevance of OSR2 mRNA in muscle invasive bladder cancer
Cited by: 4
Author(s): Daniel Uysal, Karl‐Friedrich Kowalewski, Maximilian C. Kriegmair, Ralph M. Wirtz, Zoran V. Popović, Philipp Erben
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0256286

Classifying California’s stream thermal regimes for cold-water conservation
Cited by: 12
Author(s): Ann Willis, Ryan A. Peek, Andrew L. Rypel
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0242553

Analysis of biliary MICRObiota in hepatoBILIOpancreatic diseases compared to healthy people [MICROBILIO]: Study protocol
Cited by: 3
Author(s): Fernanda Sayuri do Nascimento, Milena Oliveira Suzuki, João Victor Taba, Vitoria Carneiro de Mattos, Leonardo Zumerkorn Pipek, Eugênia Machado Carneiro D’Albuquerque, Leandro Ryuchi Iuamoto, Alberto Meyer, Wellington Andraus, João Renato Rebello Pinho, Eduardo Guimarães Hourneaux de Moura, João Carlos Setúbal, Luiz Augusto Carneiro-D’Albuquerque
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0256152

Radiomics machine learning study with a small sample size: Single random training-test set split may lead to unreliable results
Cited by: 26
Author(s): Chansik An, Yae Won Park, Sung Soo Ahn, Kyunghwa Han, Hwiyoung Kim, Seung Koo Lee
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0254555

The influence of dataset homology and a rigorous evaluation strategy on protein secondary structure prediction
Cited by: 3
Author(s): Teng Ruei Chen, Chia Hua Lo, Sheng Hung Juan, Wei Cheng Lo
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0255166

Environmental non-governmental organizations and air-pollution governance: Empirical evidence from OECD countries
Cited by: 7
Author(s): Guangqin Li, He Qiang, Dongmei Wang, Bofan Liu
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0231250

Decomposition of a set of distributions in extended exponential family form for distinguishing multiple oligo-dimensional marker expression profiles of single-cell populations and visualizing their dynamics
Cited by: 3
Author(s): Daigo Okada, Ryo Yamada
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0233920

Smooth operator: Modifying the Anhøj rules to improve runs analysis in statistical process control
Cited by: 3
Author(s): Jacob Anhøj, Tore Wentzel‐Larsen
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0243684

Effects of ploidy and salmonid alphavirus infection on the skin and gill microbiome of Atlantic salmon (Salmo salar)
Cited by: 19
Author(s): Roger Brown, Lindsey Moore, Amir Mani, Sonal Patel, Irene Salinas
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0243196

Dynamics in the Sakaguchi-Kuramoto model with bimodal frequency distribution
Cited by: 2
Author(s): Shuangjian Guo, Yuan Xie, Qionglin Dai, Haihong Li, Junzhong Yang
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0231700

Pharmacological treatment of depression: A systematic review comparing clinical practice guideline recommendations
Cited by: 48
Author(s): Franciele Cordeiro Gabriel, Daniela Oliveira de Melo, Renério Fráguas, Nathália Celini Leite-Santos, Rafael Augusto Mantovani da Silva, Eliane Ribeiro
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0224676

Molecular epidemiological characteristics of dengue virus carried by 34 patients in Guangzhou in 2018
Cited by: 2
Author(s): Feng Liao, Huini Chen, Jieliang Xie, Shaofeng Zhan, Pan Pan, Zizhao Lao, Yaohua Fan, L. C.-C. Lin, Yunfeng Lai, Shuangfeng Lin, Jianguo Wu, Xiaohong Liu, Geng Li
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0253911

When research is me-search: How researchers’ motivation to pursue a topic affects laypeople’s trust in science
Cited by: 5
Author(s): Marlene Sophie Altenmüller, Leonie Lucia Lange, Mario Gollwitzer
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0234710

Integrative analysis of gene expression and alternative splicing in microalgae grown under heterotrophic condition
Cited by: 5
Author(s): Bahman Panahi, Mohammad Amin Hejazi
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0251765

Targeting neovascularization and respiration of tumor grafts grown on chick embryo chorioallantoic membranes
Cited by: 5
Author(s): Hyrije Ademi, Dheeraj Shinde, Max Gassmann, Daniela Gerst, Hassan Chaachouay, Johannes Vogel, Thomas A. Gorr
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0242063

Inventive nesting behaviour in the keyhole wasp Pachodynerus nasidens Latreille (Hymenoptera: Vespidae) in Australia, and the risk to aviation safety
Cited by: 3
Author(s): Alan House, Jackson G. Ring, Phillip P. Shaw
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pgen.1008637

Transcriptional regulation of genes bearing intronic heterochromatin in the rice genome
Cited by: 23
Author(s): Nino A. Espinas, Le Ngoc Tu, Leonardo Furci, Yasuka Shimajiri, Yoshiko Harukawa, Saori Miura, Shohei Takuno, Hidetoshi Saze
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0243811

Sex differences in the development and expression of a preference for familiar vocal signals in songbirds
Cited by: 9
Author(s): Terushige Fujii, Maki Ikebuchi, Kazuo Okanoya
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0240390

Managing flowering time in Miscanthus and sugarcane to facilitate intra- and intergeneric crosses
Cited by: 9
Author(s): Hongxu Dong, Lindsay V. Clark, Xiaoli Jin, Kossonou Guillaume Anzoua, Л. В. Багмет, Pavel Chebukin, Elena Dzyubenko, N. I. Dzyubenko, Bimal Kumar Ghimire, Kweon Heo, Douglas A. Johnson, Hironori Nagano, Andrey Sabitov, Junhua Peng, Toshihiko Yamada, Ji Hye Yoo, Chang Yeon Yu, Hua Zhao, Stephen P. Long, Erik J. Sacks
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0249970

Psychometric properties of a screening tool for autism in the community—The Indian Autism Screening Questionnaire (IASQ)
Cited by: 5
Author(s): Surajit Chakraborty, Triptish Bhatia, Vikas Kumar Sharma, Nitin Antony, Dhritishree Das, Sushree Sahu, Surya Prakash Sharma, Vandana Shriharsh, Jaspreet S. Brar, Satish Iyengar, Ravinder Singh, Vishwajit L. Nimgaonkar, Smita N. Deshpande
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0245687

The Epidemiology of first and second-line drug-resistance Mycobacterium tuberculosis complex common species: Evidence from selected TB treatment initiating centers in Ethiopia
Cited by: 11
Author(s): Biniyam Dagne, Kassu Desta, Rahel Fekade, Misikir Amare, Mekonnen Tadesse, Getu Diriba, Betselot Zerihun, Melak Getu, Waganeh Sinshaw, Getachew Seid, Dinka Fekadu Gamtesa, Gebeyehu Assefa, Ayinalem Alemu
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0235312

Who’s afraid of the big bad boar? Assessing the effect of wild boar presence on the occurrence and activity patterns of other mammals
Cited by: 6
Author(s): Êmila Silveira de Oliveira, Manoel Ludwig da Fontoura Rodrigues, Magnus Machado Severo, Tiágo Gomes dos Santos, Carlos Benhur Kasper
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0226224

A geographically weighted random forest approach for evaluate forest change drivers in the Northern Ecuadorian Amazon
Cited by: 19
Author(s): Fabián Santos, Valerie Graw, Santiago Bonilla
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0229192

Beef cattle that respond differently to fescue toxicosis have distinct gastrointestinal tract microbiota
Cited by: 16
Author(s): Lucas R Koester, Daniel Poole, Nick V. L. Serão, Stephan Schmitz‐Esser
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pgen.1009446

Critical role of the BAF chromatin remodeling complex during murine neural crest development
Cited by: 13
Author(s): Kathleen Wung Bi-Lin, Pratap Veerabrahma Seshachalam, Tran Tuoc, Anastassia Stoykova, Sujoy Ghosh, Manvendra K. Singh
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pgen.1009252

Genome-scale reconstruction of Gcn4/ATF4 networks driving a growth program
Cited by: 4
Author(s): Rajalakshmi Srinivasan, Adhish Walvekar, Zeenat Rashida, Aswin Sai Narain Seshasayee, Sunil Laxman
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pgen.1009215

Bud23 promotes the final disassembly of the small subunit Processome in Saccharomyces cerevisiae
Cited by: 12
Author(s): Joshua J. Black, Richa Sardana, Ezzeddine W. Elmir, Arlen Johnson
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pgen.1009580

Genetics of white color and iridophoroma in “Lemon Frost” leopard geckos
Cited by: 10
Author(s): Longhua Guo, Joshua S. Bloom, Steve Sykes, Elaine Huang, Zain Kashif, Elise Pham, Katarina Ho, Ana Alcaraz, Xinshu Xiao, Sandra Duarte‐Vogel, Leonid Kruglyak
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0230007

Citizen science improves our understanding of the impact of soil management on wild pollinator abundance in agroecosystems
Cited by: 17
Author(s): Logan R. Appenfeller, Sarah Lloyd, Zsofia Szendrei
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0249859

Physiological and genetic characterization of heat stress effects in a common bean RIL population
Cited by: 17
Author(s): Yulieth Vargas, Víctor Manuel Mayor-Durán, Hector Fabio Buendia, Henry Alonso Ruiz-Guzman, Bodo Raatz
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0235078

The first juvenile dromaeosaurid (Dinosauria: Theropoda) from Arctic Alaska
Cited by: 10
Author(s): Alfio Alessandro Chiarenza, Anthony R. Fiorillo, Ronald S. Tykoski, Paul J. McCarthy, Peter P. Flaig, Dori L. Contreras
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0234958

Structural and biochemical characterization of a novel thermophilic Coh01147 protease
Cited by: 9
Author(s): Hossein Tarrahimofrad, Amir Meimandipour, Sareh Arjmand, Mohammadtaghi Beigi Nassiri, Ehsan Jahangirian, Hossein Tavana, Javad Zamani, Somayyeh Rahimnahal, Saeed Aminzadeh
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pntd.0008091

Trypanosomatid selenophosphate synthetase structure, function and interaction with selenocysteine lyase
Cited by: 4
Author(s): Marco Túlio Alves da Silva, Ivan Rosa e Silva, Lívia Maria Faim, Natália Karla Bellini, Murilo Leão Pereira, Ana Laura Lima, Teresa Cristina Leandro de Jesus, Fernanda Cristina Costa, Tatiana F. Watanabe, H.M. Pereira, Sandro Roberto Valentini, Cleslei Fernando Zanelli, Júlio César Borges, Márcio Vinícius Bertacini Dias, Júlia Pinheiro Chagas da Cunha, Bidyottam Mittra, Norma W. Andrews, Otávio Henrique Thiemann
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pgen.1008949

The Paramecium histone chaperone Spt16-1 is required for Pgm endonuclease function in programmed genome rearrangements
Cited by: 11
Author(s): Augustin de Vanssay, Amandine Touzeau, Olivier Arnaiz, Andrea Frapporti, Jamie Phipps, Sandra Duharcourt
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pgen.1009086

miRNA-mediated loss of m6A increases nascent translation in glioblastoma
Cited by: 20
Author(s): John P. Zepecki, David Karambizi, J. Eduardo Fajardo, Kristin M. Snyder, Charlotte Guetta-Terrier, Oliver Y. Tang, Jia-Shu Chen, Atom Sarkar, András Fiser, Steven Toms, Nikos Tapinos
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0244973

Floral hosts of leaf-cutter bees (Megachilidae) in a biodiversity hotspot revealed by pollen DNA metabarcoding of historic specimens
Cited by: 9
Author(s): Annemarie Gous, Connal Eardley, Steven D. Johnson, Dirk Swanevelder, Sandi Willows‐Munro
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pntd.0007997

Heatwaves and dengue outbreaks in Hanoi, Vietnam: New evidence on early warning
Cited by: 22
Author(s): Jian Cheng, Hilary Bambrick, Laith Yakob, Gregor J. Devine, Francesca D. Frentiu, Đỗ Thị Thanh Toàn, Pham Quang Thai, Zhiwei Xu, Wenbiao Hu
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0253830

High-molecular weight DNA extraction, clean-up and size selection for long-read sequencing
Cited by: 20
Author(s): Ashley Jones, Cynthia Torkel, David Stanley, Jamila Nasim, Justin O. Borevitz, Benjamin Schwessinger
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0253778

High sedation needs of critically ill COVID-19 ARDS patients—A monocentric observational study
Cited by: 27
Author(s): Armin Niklas Flinspach, Hendrik Booke, Kai Zacharowski, Ümniye Balaban, Eva Herrmann, Elisabeth Hannah Adam
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0249951

Development and validation of a set of novel and robust 4-lncRNA-based nomogram predicting prostate cancer survival by bioinformatics analysis
Cited by: 6
Author(s): Peng Zhang, Xiaodong Tan, Daoqiang Zhang, Qiyong Gong, Xuefeng Zhang
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0231738

mmannot: How to improve small–RNA annotation?
Cited by: 1
Author(s): Matthias Zytnicki, Christine Gaspin
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0243785

Systematic review and meta-analysis of late auditory evoked potentials as a candidate biomarker in the assessment of tinnitus
Cited by: 16
Author(s): Emilie Cardon, Iris Joossen, Hanne Vermeersch, Laure Jacquemin, Griet Mertens, Olivier M. Vanderveken, Vedat Topsakal, Paul Van de Heyning, Vincent Van Rompaey, Annick Gilles
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0232753

A non-stationary Markov model for economic evaluation of grass pollen allergoid immunotherapy
Cited by: 3
Author(s): Massimo Bilancia, Giuseppe Pasculli, Danilo Di Bona
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0245932

Simulation code for estimating external gamma-ray doses from a radioactive plume and contaminated ground using a local-scale atmospheric dispersion model
Cited by: 1
Author(s): Daiki Satoh, Hiromasa Nakayama, Takuya Furuta, Tamotsu Yoshihiro, Kensaku Sakamoto
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0236418

Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
Cited by: 47
Author(s): Kurt G. Schilling, Justin A. Blaber, Colin B. Hansen, Leon Y. Cai, Baxter P. Rogers, Adam W. Anderson, Seth A. Smith, Praitayini Kanakaraj, Tonia S. Rex, Susan M. Resnick, Andrea T. Shafer, Laurie E. Cutting, Neil D. Woodward, David H. Zald, Bennett A. Landman
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0253848

Predictors of mortality in patients with drug-resistant tuberculosis: A systematic review and meta-analysis
Cited by: 10
Author(s): Ayinalem Alemu, Zebenay Workneh Bitew, Teshager Worku, Dinka Fikadu Gamtesa, Animut Alebel
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pgen.1008941

A point mutation decouples the lipid transfer activities of microsomal triglyceride transfer protein
Cited by: 16
Author(s): Meredith H. Wilson, Sujith Rajan, Aidan Danoff, Richard White, Monica R. Hensley, Vanessa H. Quinlivan, Rosario Recacha, James H. Thierer, Frederick J. Tan, Elisabeth M Busch-Nentwich, Lloyd W. Ruddock, M. Mahmood Hussain, Steven A. Farber
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0253515

Risk of adverse events in gastrointestinal endoscopy: Zero-inflated Poisson regression mixture model for count data and multinomial logit model for the type of event
Cited by: 7
Author(s): Marco Gemma, Fulvia Pennoni, Roberta Tritto, Massimo Aglietta
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0228764

Identification of microRNAs involved in NOD-dependent induction of pro-inflammatory genes in pulmonary endothelial cells
Cited by: 4
Author(s): Ann-Kathrin Vlacil, Evelyn Vollmeister, Wilhelm Bertrams, Florian Schoesser, Raghav Oberoi, Jutta Schuett, Harald Schuett, Sonja Huehn, Katrin Bedenbender, Bernd Schmeck, Bernhard Schieffer, Karsten Grote
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pmed.1003396

Defining remission of type 2 diabetes in research studies: A systematic scoping review
Cited by: 20
Author(s): Mireille Captieux, Regina Prigge, Sarah Wild, Bruce Guthrie
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0253838

Factors driving the compositional diversity of Apis mellifera bee venom from a Corymbia calophylla (marri) ecosystem, Southwestern Australia
Cited by: 8
Author(s): Daniela Scaccabarozzi, Ken Dods, Thao T. Le, Joel Gummer, Michele Lussu, Lynne A. Milne, Tristan Campbell, Ben Pan Wafujian, Colin Priddis
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pntd.0007947

Feeding behavior and activity of Phlebotomus pedifer and potential reservoir hosts of Leishmania aethiopica in southwestern Ethiopia
Cited by: 8
Author(s): Myrthe Pareyn, Abena Kochora, Luca Van Rooy, Nigatu Eligo, Bram Vanden Broecke, Nigatu Girma, Behailu Merdekios, Teklu Wegayehu, Louis Maes, Guy Caljon, Bernt Lindtjørn, Herwig Leirs, Fekadu Massebo
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0222271

ViraMiner: Deep learning on raw DNA sequences for identifying viral genomes in human samples
Cited by: 79
Author(s): Ardi Tampuu, Zurab Bzhalava, Joakim Dillner, Rául Vicente
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0251630

Framing the potential of public frameshift peptides as immunotherapy targets in colon cancer
Cited by: 3
Author(s): Ide Spaanderman, Fleur S. Peters, Aldo Jongejan, E. Redeker, Cornelis J.A. Punt, Adriaan D. Bins
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.ppat.1009439

A novel cell culture system modeling the SARS-CoV-2 life cycle
Cited by: 81
Author(s): Xiaohui Ju, Yangyong Zhu, Yuyan Wang, Jingrui Li, Jiaxing Zhang, Mingli Gong, Wenlin Ren, Sai Li, Jin Zhong, Linqi Zhang, Qiangfeng Cliff Zhang, Rong Zhang, Qiang Ding
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0247966

Relationships between topographic factors, soil and plant communities in a dry Afromontane forest patches of Northwestern Ethiopia
Cited by: 12
Author(s): Liyew Birhanu, Tamrat Bekele, Binyam Tesfaw, Sebsebe Demissew
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0256563

Evidence for an increase in cannabis use in Iran – A systematic review and trend analysis
Cited by: 10
Author(s): Yasna Rostam–Abadi, Jaleh Gholami, Ma­soumeh Amin-Esmaeili, Shahab Baheshmat, Marziyeh Hamzehzadeh, Hossein Rafiemanesh, Morteza Nasserbakht, Leila Ghalichi, Anousheh Safarcherati, Farhad Taremian, Ramin Mojtabai, Afarin Rahimi‐Movaghar
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pgen.1008801

Dynamic genetic architecture of yeast response to environmental perturbation shed light on origin of cryptic genetic variation
Cited by: 14
Author(s): Yanjun Zan, Örjan Carlborg
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0240226

Origami folding: Taxing resources necessary for the acquisition of sequential skills
Cited by: 6
Author(s): Fang Zhao, Robert Gaschler, Anneli Kneschke, Simon Rädler, Melanie Gausmann, Christina Duttine, Hilde Haider
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0241754

Emergence of a novel chikungunya virus strain bearing the E1:V80A substitution, out of the Mombasa, Kenya 2017-2018 outbreak
Cited by: 9
Author(s): Fredrick Eyase, Solomon Langat, Irina Maljkovic Berry, Francis Mulwa, Albert Nyunja, James Mu, Samuel Owaka, Samson Limbaso, Victor Ofula, Hellen Koka, Edith Koskei, Joel Lutomiah, Richard G. Jarman, Rosemary Sang
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0245976

SLAM-based augmented reality for the assessment of short-term spatial memory. A comparative study of visual versus tactile stimuli
Cited by: 8
Author(s): Francisco Munoz-Montoya, M. Carmen Juan, Magdalena Méndez-López, Ramón Mollá, Francisco Abad, Camino Fidalgo
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.ppat.1009410

Macrophage-specific responses to human- and animal-adapted tubercle bacilli reveal pathogen and host factors driving multinucleated cell formation
Cited by: 18
Author(s): Christophe J. Queval, Antony Fearns, Laure Botella, Alicia Smyth, Laura Schnettger, Morgane Mitermite, Esen Wooff, Bernardo Villarreal‐Ramos, Waldo L. García-Jiménez, Tiaan Heunis, Matthias Trost, Dirk Werling, Francisco J. Salguero, Stephen V. Gordon, Maximiliano G. Gutiérrez
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0245220

Development of spontaneous vegetation on reclaimed land in Singapore measured by NDVI
Cited by: 6
Author(s): Leon Yan-Feng Gaw, Daniel R. Richards
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0238588

Nonverbal communication in selfies posted on Instagram: Another look at the effect of gender on vertical camera angle
Cited by: 5
Author(s): Alessandro Soranzo, Nicola Bruno
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.ppat.1009723

ACE2-lentiviral transduction enables mouse SARS-CoV-2 infection and mapping of receptor interactions
Cited by: 17
Author(s): Daniel J. Rawle, Thuy T. Le, Troy Dumenil, Kexin Yan, Bing Tang, Wilson Nguyen, Daniel Watterson, Naphak Modhiran, Jody Hobson‐Peters, Cameron Bishop, Andreas Suhrbier
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0224887

Carbonate production of Micronesian reefs suppressed by thermal anomalies and Acanthaster as sea-level rises
Cited by: 8
Author(s): Robert van Woesik, Christopher William Cacciapaglia
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0235692

Fox dietary ecology as a tracer of human impact on Pleistocene ecosystems
Cited by: 17
Author(s): Chris Baumann, Hervé Bocherens, Dorothée G. Drucker, Nicholas J. Conard
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0228974

Parental investment and immune dynamics in sex-role reversed pipefishes
Cited by: 4
Author(s): Isabel Keller, Olivia Roth
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.ppat.1009647

Sustained viremia suppression by SHIVSF162P3CN-recalled effector-memory CD8+ T cells after PD1-based vaccination
Cited by: 1
Author(s): Yik Chun Wong, Liu Wan, Lok Yan Yim, Xin Li, Hui Wang, Yue Ming, Mang Niu, Lin Cheng, Liuyi Ling, Yanhua Du, Samantha M. Y. Chen, Kmc Cheung, Haibo Wang, Xian Tang, Jiansong Tang, Haoji Zhang, You‐Qiang Song, Lisa A. Chakrabarti, Zhiwei Chen
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0240032

Evaluating the quality of evidence for gaming disorder: A summary of systematic reviews of associations between gaming disorder and depression or anxiety
Cited by: 17
Author(s): Michelle Colder Carras, Jing Shi, Gregory Hard, Ian J. Saldanha
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0250753

Automated analysis of bacterial flow cytometry data with FlowGateNIST
Cited by: 7
Author(s): David Ross
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0256336

Has resistance to chlorhexidine increased among clinically-relevant bacteria? A systematic review of time course and subpopulation data
Cited by: 13
Author(s): Stephen E. Buxser
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pmed.1003346

Occurrence and transmission potential of asymptomatic and presymptomatic SARS-CoV-2 infections: A living systematic review and meta-analysis
Cited by: 805
Author(s): D. Buitrago-Garcia, Dianne Egli-Gany, Michel Jacques Counotte, Stefanie Hossmann, Hira Imeri, Aziz Mert Ipekci, Georgia Salanti, Nicola Low
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0245685

Brain organoid formation on decellularized porcine brain ECM hydrogels
Cited by: 44
Author(s): Robin Simsa, Theresa S.P. Rothenbücher, Hakan Gürbüz, Nidal Ghosheh, Jenny Emnéus, Lachmi Jenndahl, David L. Kaplan, Niklas Bergh, Alberto Martínez Serrano, Per Fogelstrand
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0244816

Objective Structured Assessment of Debriefing (OSAD) in simulation-based medical education: Translation and validation of the German version
Cited by: 6
Author(s): Sandra Abegglen, Andrea Krieg, Helen Eigenmann, Robert Greif
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0245146

Powerline right-of-way management and flower-visiting insects: How vegetation management can promote pollinator diversity
Cited by: 5
Author(s): Laura Russo, Hannah Stout, Dana Roberts, Bradley D. Ross, Carolyn G. Mahan
Software Mentions: 3
Published: over 5 years ago