10.1371/journal.pone.0232385

Investigating the origin and consequences of endogenous default options in repeated economic choices
Cited by: 4
Author(s): Joaquina Couto, Leendert van Maanen, Maël Lebreton
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.ppat.1009439

A novel cell culture system modeling the SARS-CoV-2 life cycle
Cited by: 81
Author(s): Xiaohui Ju, Yangyong Zhu, Yuyan Wang, Jingrui Li, Jiaxing Zhang, Mingli Gong, Wenlin Ren, Sai Li, Jin Zhong, Linqi Zhang, Qiangfeng Cliff Zhang, Rong Zhang, Qiang Ding
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0246471

Strategies for retention of heterosexual men in HIV care in sub-Saharan Africa: A systematic review
Cited by: 14
Author(s): Sylvia Kusemererwa, Dickens Akena, Damalie Nakanjako, Joanita Kigozi, Regina Nanyunja, Mastula Nanfuka, Bennet Kizito, Joseph Mugisha Okello, Nelson K. Sewankambo
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0254744

The boundary-spanning mechanisms of Nobel Prize winning papers
Cited by: 18
Author(s): Yakub Sebastian, Chaomei Chen
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0229217

Testing gene-environment interactions for rare and/or common variants in sequencing association studies
Cited by: 4
Author(s): Zihan Zhao, Jianjun Zhang, Qiuying Sha, Hao Han
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0239625

Autophagy mitigates ethanol-induced mitochondrial dysfunction and oxidative stress in esophageal keratinocytes
Cited by: 14
Author(s): Prasanna M. Chandramouleeswaran, Manti Guha, Masataka Shimonosono, Kelly A. Whelan, Hirofumi Maekawa, Uma M. Sachdeva, Gordon Ruthel, Sarmistha Mukherjee, Noah Engel, Michael V. Gonzalez, James Garifallou, Shinya Ohashi, Andres J. Klein‐Szanto, Clementina Mesaros, Ian A. Blair, Renata Pellegrino da Silva, Hákon Hákonarson, Eishi Noguchi, Joseph A. Baur, Hiroshi Nakagawa
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0255313

Competing risk of mortality in association studies of non-fatal events
Cited by: 6
Author(s): Petra Bùžková
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0230909

Variability of cost trajectories over the last year of life in patients with advanced breast cancer in the Netherlands
Cited by: 7
Author(s): P. Schneider, Xavier Pouwels, Valéria Lima Passos, Bram Ramaekers, S.M.E. Geurts, Khava I. E. Ibragimova, Maaike de Boer, Frans Erdkamp, B. Vriens, Agnès J. van de Wouw, Marien O den Boer, M.J.A.E. Pepels, Vivianne C. G. Tjan‐Heijnen, Manuela A. Joore
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0253611

Identification of novel and rare variants associated with handgrip strength using whole genome sequence data from the NHLBI Trans-Omics in Precision Medicine (TOPMed) Program
Cited by: 4
Author(s): Chloé Sarnowski, Han Chen, Mary L. Biggs, Sylvia Wassertheil‐Smoller, Jan Bressler, Marguerite R. Irvin, Kathleen A. Ryan, David Karasik, Donna K. Arnett, L. Adrienne Cupples, David W. Fardo, Stephanie M. Gogarten, Benjamin D. Heavner, Deepti Jain, Hyun Min Kang, Charles Kooperberg, Arch G. Mainous, Braxton D. Mitchell, Alanna C. Morrison, Jeffrey R. O’Connell, Bruce M. Psaty, Kenneth Rice, Albert V. Smith, Ramachandran S. Vasan, B. Gwen Windham, Douglas P. Kiel, Joanne M. Murabito, Kathryn L. Lunetta, TOPMed Longevity
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0252245

Rationale and validation of a novel mobile application probing motor inhibition: Proof of concept of CALM-IT
Cited by: 1
Author(s): Elise M. Cardinale, Reut Naim, Simone P. Haller, Ramaris E. German, Christian Botz-Zapp, Jessica Bezek, David C. Jangraw, Melissa A. Brotman
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0252501

A clinical diabetes risk prediction model for prediabetic women with prior gestational diabetes
Cited by: 8
Author(s): Bernice Man, Alan Schwartz, Oksana Pugach, Yinglin Xia, Ben S. Gerber
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0251932

COVID-19 and the kidney: A retrospective analysis of 37 critically ill patients using machine learning
Cited by: 2
Author(s): Anna Laura Herzog, Holger K. von Jouanne-Diedrich, Christoph Wanner, Dirk Weismann, Tobias Schlesinger, Patrick Meybohm, Jan Stumpner
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0227113

Indicators to distinguish symptom accentuators from symptom producers in individuals with a diagnosed adjustment disorder: A pilot study on inconsistency subtypes using SIMS and MMPI-2-RF
Cited by: 23
Author(s): Cristina Mazza, Graziella Orrù, Franco Burla, Merylin Monaro, Stefano Ferracuti, Marco Colasanti, Paolo Roma
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pgen.1008398

Genomic dissection of an extended phenotype: Oak galling by a cynipid gall wasp
Cited by: 40
Author(s): Jack Hearn, Mark Blaxter, Karsten Schönrogge, J. L. Nieves‐Aldrey, Juli Pujadé-Villar, Elisabeth Huguet, Jean‐Michel Drezen, Joseph D. Shorthouse, Graham N. Stone
Software Mentions: 3
Published: about 7 years ago

10.1371/journal.pone.0247041

16S rRNA gene sequencing of rectal swab in patients affected by COVID-19
Cited by: 32
Author(s): Antonio Mazzarelli, Maria Letizia Giancola, Anna Farina, Luisa Marchioni, Martina Rueca, Cesare Ernesto Maria Gruber, Barbara Bartolini, Tommaso Ascoli Bartoli, Gaetano Maffongelli, Maria Rosaria Capobianchi, Giuseppe Ippolito, Antonino Di, Emanuele Nicastri, Valerio Pazienza
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0239781

A theoretical morphological model for quantitative description of the three-dimensional floral morphology in water lily (Nymphaea)
Cited by: 1
Author(s): Shiryu Kirié, Hideo Iwasaki, Koji Noshita, Hiroyoshi Iwata
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0246983

Who infects whom?—Reconstructing infection chains of Mycobacterium avium ssp. paratuberculosis in an endemically infected dairy herd by use of genomic data
Cited by: 9
Author(s): Annette Nigsch, Suelee Robbe‐Austerman, Tod Stuber, Paulina D. Pavinski Bitar, Yrjö T. Gröhn, Y.H. Schukken
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0244308

Revisiting discrete versus continuous models of human behavior: The case of absolute pitch
Cited by: 4
Author(s): Stephen C. Van Hedger, John P. Veillette, Shannon L. M. Heald, Howard C. Nusbaum
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0239528

Regulatory and evolutionary adaptation of yeast to acute lethal ethanol stress
Cited by: 9
Author(s): Jiping Yang, Saeed Tavazoie
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0242553

Analysis of biliary MICRObiota in hepatoBILIOpancreatic diseases compared to healthy people [MICROBILIO]: Study protocol
Cited by: 3
Author(s): Fernanda Sayuri do Nascimento, Milena Oliveira Suzuki, João Victor Taba, Vitoria Carneiro de Mattos, Leonardo Zumerkorn Pipek, Eugênia Machado Carneiro D’Albuquerque, Leandro Ryuchi Iuamoto, Alberto Meyer, Wellington Andraus, João Renato Rebello Pinho, Eduardo Guimarães Hourneaux de Moura, João Carlos Setúbal, Luiz Augusto Carneiro-D’Albuquerque
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pgen.1008619

Accounting for long-range correlations in genome-wide simulations of large cohorts
Cited by: 39
Author(s): Dominic Nelson, Jerome Kelleher, Aaron P. Ragsdale, Claudia Moreau, Gil McVean, Simon Gravel
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0257254

Knocking out TMEM38B in human foetal osteoblasts hFOB 1.19 by CRISPR/Cas9: A model for recessive OI type XIV
Cited by: 4
Author(s): Laura Leoni, Francesca Tonelli, Roberta Besio, Roberta Gioia, Francesco Moccia, Antonio Rossi, Antonella Forlino
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.ppat.1009549

Human DICER helicase domain recruits PKR and modulates its antiviral activity
Cited by: 15
Author(s): Thomas Montavon, Morgane Baldaccini, Mathieu Lefèvre, Erika Girardi, Béatrice Chane-Woon-Ming, Marie C. Messmer, Philippe Hammann, Johana Chicher, Sébastien Pfeffer
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0207827

Benchmarking treewidth as a practical component of tensor network simulations
Cited by: 11
Author(s): Eugene Dumitrescu, Allison L. Fisher, Timothy D. Goodrich, Travis S. Humble, Blair D. Sullivan, Andrew Wright
Software Mentions: 3
Published: almost 8 years ago

10.1371/journal.ppat.1009494

The multi-functional reovirus σ3 protein is a virulence factor that suppresses stress granule formation and is associated with myocardial injury
Cited by: 14
Author(s): Yingying Guo, Meleana M. Hinchman, Mercedes Lewandrowski, Shaun T. Cross, Danica M. Sutherland, Olivia L. Welsh, Terence S. Dermody, John S. L. Parker
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0234880

The proximity of ideas: An analysis of patent text using machine learning
Cited by: 12
Author(s): Shuijuan Feng
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0243785

Systematic review and meta-analysis of late auditory evoked potentials as a candidate biomarker in the assessment of tinnitus
Cited by: 16
Author(s): Emilie Cardon, Iris Joossen, Hanne Vermeersch, Laure Jacquemin, Griet Mertens, Olivier M. Vanderveken, Vedat Topsakal, Paul Van de Heyning, Vincent Van Rompaey, Annick Gilles
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0238815

Evaluation of strategies using simulation model to control a potential outbreak of highly pathogenic avian influenza among poultry farms in Central Luzon, Philippines
Cited by: 5
Author(s): Roderick T. Salvador, Neil Tanquilut, Rosemarie Macmac, Kannika Na Lampang, Warangkhana Chaisowwong, Dirk U. Pfeiffer, Veerasak Punyapornwithaya
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.ppat.1009772

Signatures in SARS-CoV-2 spike protein conferring escape to neutralizing antibodies
Cited by: 68
Author(s): Marta Alenquer, Filipe Ferreira, Diana Lousa, Mariana Valério, Mónica Medina-Lopes, Marie‐Louise Bergman, Juliana Gonçalves, Jocelyne Demengeot, Ricardo B. Leite, Jingtao Lilue, Zemin Ning, Carlos Penha‐Gonçalves, Helena Soares, Cláudio M. Soares, Maria João Amorim
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0233920

Smooth operator: Modifying the Anhøj rules to improve runs analysis in statistical process control
Cited by: 3
Author(s): Jacob Anhøj, Tore Wentzel‐Larsen
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pntd.0008091

Trypanosomatid selenophosphate synthetase structure, function and interaction with selenocysteine lyase
Cited by: 4
Author(s): Marco Túlio Alves da Silva, Ivan Rosa e Silva, Lívia Maria Faim, Natália Karla Bellini, Murilo Leão Pereira, Ana Laura Lima, Teresa Cristina Leandro de Jesus, Fernanda Cristina Costa, Tatiana F. Watanabe, H.M. Pereira, Sandro Roberto Valentini, Cleslei Fernando Zanelli, Júlio César Borges, Márcio Vinícius Bertacini Dias, Júlia Pinheiro Chagas da Cunha, Bidyottam Mittra, Norma W. Andrews, Otávio Henrique Thiemann
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0242063

Inventive nesting behaviour in the keyhole wasp Pachodynerus nasidens Latreille (Hymenoptera: Vespidae) in Australia, and the risk to aviation safety
Cited by: 3
Author(s): Alan House, Jackson G. Ring, Phillip P. Shaw
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0253515

Risk of adverse events in gastrointestinal endoscopy: Zero-inflated Poisson regression mixture model for count data and multinomial logit model for the type of event
Cited by: 7
Author(s): Marco Gemma, Fulvia Pennoni, Roberta Tritto, Massimo Aglietta
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0239276

Standardized metrics can reveal region-specific opportunities in community engagement to aid recruitment in HIV prevention trials
Cited by: 10
Author(s): Gail Broder, Jonathan Lucas, Jontraye Davis, Stephaun E Wallace, Nandisile Luthuli, Kagisho Baepanye, Rhonda White, Marcus Bolton, Cheryl Blanchette, Michele P. Andrasik
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0250569

Profiles and outcomes in patients with COVID-19 admitted to wards of a French oncohematological hospital: A clustering approach
Cited by: 3
Author(s): Louise Bondeelle, Sylvie Chevret, S. Cassonnet, Stéphanie Harel, Blandine Denis, Nathalie De Castro, Anne Bergeron
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0240062

Phylogenomics from transcriptomic “bycatch” clarify the origins and diversity of avian trypanosomes in North America
Cited by: 7
Author(s): Spencer C. Galen, Janus Borner, Susan L. Perkins, Jason D. Weckstein
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0238430

The social network of medical case managers, housing providers, and health department staff in the Ryan White HIV/AIDS Program: A Midwest case study
Cited by: 5
Author(s): Joseph S. Lightner, Jamie Shank, Ryan McBain, Tyler Prochnow
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0252691

Industrialization as a source of heavy metals and antibiotics which can enhance the antibiotic resistance in wastewater, sewage sludge and river water
Cited by: 42
Author(s): Jakub Hubeny, Monika Harnisz, Ewa Korzeniewska, Martyna Buta, W. Zieliński, Damian Rolbiecki, Joanna Giebułtowicz, Grzegorz Nałęcz‐Jawecki, Grażyna Płaza
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0228976

Seasonal and social factors associated with spacing in a wild territorial electric fish
Cited by: 7
Author(s): Lucía Zubizarreta, Laura Quintana, Daniel Hernández, Franco Teixeira de Mello, Mariana Meerhoff, Renato Massaaki Honji, Renata Guimarães Moreira, Ana C. Silva
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0231942

Putting the microbiota to work: Epigenetic effects of early life antibiotic treatment are associated with immune-related pathways and reduced epithelial necrosis following Salmonella Typhimurium challenge in vitro
Cited by: 4
Author(s): Matheus O. Costa, Janelle M Fouhse, Ana Paula P. Silva, Benjamin P. Willing, John C. S. Harding
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0224887

Carbonate production of Micronesian reefs suppressed by thermal anomalies and Acanthaster as sea-level rises
Cited by: 8
Author(s): Robert van Woesik, Christopher William Cacciapaglia
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0232846

Diversity in kinetics correlated with structure in nano body-stabilized LacY
Cited by: 3
Author(s): Atul Kumar Johri, J. Finer-Moore, И. Н. Смирнова, Vladimir N. Kasho, Els Pardon, Jan Steyaert, H. Ronald Kaback, Robert M. Stroud
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0240693

Inside the decentralised casino: A longitudinal study of actual cryptocurrency gambling transactions
Cited by: 6
Author(s): Oliver James Scholten, David Zendle, James Alfred Walker
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0227665

Determining hydrological flow paths to enhance restoration in impaired mangrove wetlands
Cited by: 17
Author(s): Rosela Pérez-Ceballos, Arturo Zaldívar-Jiménez, Julio Canales-Delgadillo, Haydée López-Adame, Jorge López‐Portillo, Martín Merino–Ibarra
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0228974

Parental investment and immune dynamics in sex-role reversed pipefishes
Cited by: 4
Author(s): Isabel Keller, Olivia Roth
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0225064

Arabidopsis TRM5 encodes a nuclear-localised bifunctional tRNA guanine and inosine-N1-methyltransferase that is important for growth
Cited by: 14
Author(s): Qianqian Guo, Pei Qin Ng, Shanshan Shi, Diwen Fan, Jun Li, Jing Zhao, Hua Wang, Rakesh David, Parul Mittal, Quang Trung, Ralph Bock, Ming Zhao, Wenbin Zhou, Iain Searle
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0256858

A general method for estimating the prevalence of influenza-like-symptoms with Wikipedia data
Cited by: 3
Author(s): Giovanni De Toni, Cristian Consonni, Alberto Montresor
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.ppat.1009647

Sustained viremia suppression by SHIVSF162P3CN-recalled effector-memory CD8+ T cells after PD1-based vaccination
Cited by: 1
Author(s): Yik Chun Wong, Liu Wan, Lok Yan Yim, Xin Li, Hui Wang, Yue Ming, Mang Niu, Lin Cheng, Liuyi Ling, Yanhua Du, Samantha M. Y. Chen, Kmc Cheung, Haibo Wang, Xian Tang, Jiansong Tang, Haoji Zhang, You‐Qiang Song, Lisa A. Chakrabarti, Zhiwei Chen
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0248881

The Simpsons did it: Exploring the film trope space and its large scale structure
Cited by: 3
Author(s): Pablo García‐Sánchez, Antonio Vélez-Estévez, J. J. Merelo, Manuel J. Cobo
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0239483

The health benefits and cost-effectiveness of complete healthy vending
Cited by: 6
Author(s): Melda Lois Griffiths, Eryl Powell, L. H. Usher, Jacky Boivin, Lewis Bott
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0248687

Lost to follow-up and associated factors among patients with drug resistant tuberculosis in Ethiopia: A systematic review and meta-analysis
Cited by: 8
Author(s): Assefa Andargie, Asressie Molla Tessema, Fentaw Tadese, Segenet Zewdie
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0242194

Identification of potential target genes and crucial pathways in small cell lung cancer based on bioinformatic strategy and human samples
Cited by: 6
Author(s): Xiuwen Chen, Li Wang, Xiaomin Su, Senyuan Luo, Xianbin Tang, Yugang Huang
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0232339

Seroprevalence of three paramyxoviruses; Hendra virus, Tioman virus, Cedar virus and a rhabdovirus, Australian bat lyssavirus, in a range expanding fruit bat, the Grey-headed flying fox (Pteropus poliocephalus)
Cited by: 19
Author(s): Wayne Boardman, Michelle L. Baker, Victoria Boyd, Gary Crameri, Grantley R. Peck, Terry Reardon, Ian Smith, Charles Caraguel, Thomas A. A. Prowse
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pgen.1008681

The domesticated transposase ALP2 mediates formation of a novel Polycomb protein complex by direct interaction with MSI1, a core subunit of Polycomb Repressive Complex 2 (PRC2)
Cited by: 20
Author(s): Christos N. Velanis, Pumi Perera, Bennett Thomson, Erica de Leau, Shih Chieh Liang, Ben Hartwig, Alexander Förderer, Harry Thornton, Pedro Arêde, Jiawen Chen, Kimberly M. Webb, Serin Gümüs, Geert De Jaeger, Clinton A. Page, C. Nathan Hancock, Christos Spanos, Juri Rappsilber, Philipp Voigt, Franziska Turck, Frank Wellmer, Justin Goodrich
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0250468

Application of big-data for epidemiological studies of refractive error
Cited by: 7
Author(s): Michael Moore, James Loughman, John S. Butler, Arne Ohlendorf, Siegfried Wahl, Daniel Ian Flitcroft
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pcbi.1007894

Predicting host taxonomic information from viral genomes: A comparison of feature representations
Cited by: 29
Author(s): Francesca Young, Simon Rogers, David L. Robertson
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0249071

Predicting innovative firms using web mining and deep learning
Cited by: 19
Author(s): Jan Kinne, David Lenz
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0248054

Revealing the high variability on nonconserved core and mobile elements of Austropuccinia psidii and other rust mitochondrial genomes
Cited by: 5
Author(s): Jaqueline Raquel de Almeida, Diego Mauricio Riaño-Pachón, Lívia Maria Franceschini, Isaneli Batista dos Santos, Jessica Aparecida Ferrarezi, Pedro Avelino Maia de Andrade, Cláudia Barros Monteiro-Vitorello, Carlos Alberto Labate, Maria Carolina Quecine
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0234354

Negshell casting: 3D-printed structured and sacrificial cores for soft robot fabrication
Cited by: 5
Author(s): Pornthep Preechayasomboon, Eric Rombokas
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pcbi.1008939

How multisite phosphorylation impacts the conformations of intrinsically disordered proteins
Cited by: 22
Author(s): Fan Jin, Frauke Gräter
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0231250

Decomposition of a set of distributions in extended exponential family form for distinguishing multiple oligo-dimensional marker expression profiles of single-cell populations and visualizing their dynamics
Cited by: 3
Author(s): Daigo Okada, Ryo Yamada
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0243196

Dynamics in the Sakaguchi-Kuramoto model with bimodal frequency distribution
Cited by: 2
Author(s): Shuangjian Guo, Yuan Xie, Qionglin Dai, Haihong Li, Junzhong Yang
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0229467

Discovery of antitumor lectins from rainforest tree root transcriptomes
Cited by: 3
Author(s): Atip Lawanprasert, Caitlin A. Guinan, Erica A. Langford, Carly E. Hawkins, Janna N. Sloand, Howard W. Fescemyer, Matthew R. Aronson, Jacob A. Halle, James H. Marden, Scott H. Medina
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0242336

Applications of a working framework for the measurement of representative learning design in Australian football
Cited by: 13
Author(s): Peter Browne, Carl T. Woods, Alice Sweeting, Sam Robertson
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0236126

Impact of processing method on donated human breast milk microRNA content
Cited by: 24
Author(s): Urszula Smyczyńska, Marcin A. Bartłomiejczyk, Marcin Stańczak, Paweł Sztromwasser, Aleksandra Wesołowska, Olga Barbarska, Emilia Pawlikowska, Wojciech Fendler
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0248864

Prevalence of psychiatric disorders in Norwegian 10-14-year-olds: Results from a cross-sectional study
Cited by: 5
Author(s): Tormod Bøe, Einar Heiervang, Kjell Morten Stormark, Astri J. Lundervold, Mari Hysing
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pgen.1009710

DNA methyltransferase CHROMOMETHYLASE3 prevents ONSEN transposon silencing under heat stress
Cited by: 18
Author(s): Kohei Nozawa, Jiani Chen, Jingchao Jiang, Sarah M. Leichter, Masataka Yamada, Takamasa Suzuki, Fengquan Liu, Hidetaka Ito, Xuehua Zhong
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0229583

Optimized criteria for locomotion-based healthspan evaluation in C. elegans using the WorMotel system
Cited by: 11
Author(s): Areta Jushaj, Matthew A. Churgin, Bowen Yao, M. de la Torre, Christopher Fang-Yen, Liesbet Temmerman
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0241212

Insights into the genetic diversity, recombination, and systemic infections with evidence of intracellular maturation of hepadnavirus in cats
Cited by: 29
Author(s): Chutchai Piewbang, Sabrina Wahyu Wardhani, Surangkanang Chaiyasak, Jakarwan Yostawonkul, Poowadon Chai‐in, Suwimon Boonrungsiman, Tanit Kasantikul, Somporn Techangamsuwan
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0249560

Sexual inhibition and sexual excitation in a sample of Polish women
Cited by: 7
Author(s): Krzysztof Nowosielski, Jacek Kurpisz, Robert Kowalczyk
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0242474

Exploring options for reprocessing of N95 Filtering Facepiece Respirators (N95-FFRs) amidst COVID-19 pandemic: A systematic review
Cited by: 19
Author(s): Diptanu Paul, Ayush Gupta, Anand Kumar Maurya
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0249313

Fire Acupuncture versus conventional acupuncture to treat spasticity after stroke: A systematic review and meta-analysis
Cited by: 10
Author(s): Xuan Qiu, Yaowen Gao, Zhaoxu Zhang, Sijia Cheng, Shuangmei Zhang
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0236480

Effects of quality-based procedure hospital funding reform in Ontario, Canada: An interrupted time series study
Cited by: 3
Author(s): Alvin H. Li, Karen S. Palmer, Monica Taljaard, J. Michael Paterson, Adalsteinn D. Brown, Anjie Huang, Husayn Marani, Lauren Lapointe‐Shaw, Daniel Pincus, Marian S. Wettstein, Girish S. Kulkarni, David Wasserstein, Noah Ivers
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0240032

Evaluating the quality of evidence for gaming disorder: A summary of systematic reviews of associations between gaming disorder and depression or anxiety
Cited by: 17
Author(s): Michelle Colder Carras, Jing Shi, Gregory Hard, Ian J. Saldanha
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0249309

The male bias of a generically-intended masculine pronoun: Evidence from eye-tracking and sentence evaluation
Cited by: 5
Author(s): Theresa Redl, Stefan Frank, Peter de Swart, H. de Hoop
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0227726

Degree day models to forecast the seasonal phenology of Drosophila suzukii in tart cherry orchards in the Midwest U.S.
Cited by: 7
Author(s): Matthew T. Kamiyama, Benjamin Z Bradford, Russell L. Groves, Christelle Guédot
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0239263

Diversity of nutritional content in seeds of Brazilian common bean germplasm
Cited by: 11
Author(s): Jéssica Delfini, Vânia Moda-Cirino, José dos Santos Neto, Juliana Sawada Buratto, Paulo Maurício Ruas, Leandro Simões Azeredo Gonçalves
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0233582

Modelling the developmental spliceosomal craniofacial disorder Burn-McKeown syndrome using induced pluripotent stem cells
Cited by: 16
Author(s): Karen L. Wood, Charlie F. Rowlands, Huw B. Thomas, Steven Paul Woods, Julieta O’Flaherty, Sofia Douzgou, Susan J. Kimber, William G. Newman, Raymond T. O’Keefe
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0234431

Comparative analysis of viruses in four bee species collected from agricultural, urban, and natural landscapes
Cited by: 10
Author(s): Tuğçe Olgun, Sydney E. Everhart, Troy D. Anderson, Judy Wu‐Smart
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0242200

Selection signatures in two oldest Russian native cattle breeds revealed using high-density single nucleotide polymorphism analysis
Cited by: 17
Author(s): N. A. Zinovieva, Arsen V Dotsev, A.A. Sermyagin, Tatiana Deniskova, Alexandra Abdelmanova, В. Р. Харзинова, Johann Sölkner, Henry Reyer, Klaus Wimmers, Gottfried Brem
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0238829

COVID-19 infections and outcomes in a live registry of heart failure patients across an integrated health care system
Cited by: 17
Author(s): César Caraballo, Megan McCullough, Michael Fuery, Fouad Chouairi, Craig Keating, Neal G. Ravindra, Paul E. Miller, Maricar Malinis, Nitu Kashyap, Allen Hsiao, F. Perry Wilson, Jeptha P. Curtis, Matthew Grant, Eric J. Velázquez, Nihar R. Desai, Tariq Ahmad
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0238595

Shark discards in selective and mixed-species pelagic longline fisheries
Cited by: 7
Author(s): Gareth L. Jordaan, Jorge Santos, Johan C. Groeneveld
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0231120

Orchard layout and plant traits influence fruit yield more strongly than pollinator behaviour and density in a dioecious crop
Cited by: 4
Author(s): Angela Peace, David E. Pattemore, Melissa Broussard, Dilini Fonseka, Nathan Tomer, Nilsa A. Bosque‐Pérez, David W. Crowder, Allison K. Shaw, Linley K. Jesson, Brad G. Howlett, Mateusz Jochym, Jing Li
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pntd.0009635

The influence of leprosy-related clinical and epidemiological variables in the occurrence and severity of COVID-19: A prospective real-world cohort study
Cited by: 14
Author(s): Selma Regina Penha Silva Cerqueira, Patrícia Duarte Deps, Débora Rosilei Miquini de Freitas Cunha, Natanael Victor Furtunato Bezerra, Daniel Holanda Barroso, Ana Bárbara Sapienza Pinheiro, Gecilmara Salviato Pillegi, Taynah Alves Rocha Repsold, Patrícia Shu Kurizky, Simon M Collin, Ciro Martins Gomes
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0236393

Association between over-indebtedness and antidepressant use: A cross-sectional analysis
Cited by: 1
Author(s): Jacqueline Warth, Niklas Beckmann, Marie-Therese Puth, Judith Tillmann, Johannes Porz, Ulrike Zier, Klaus Weckbecker, Birgitta Weltermann, Eva Münster
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pcbi.1007970

Real time structural search of the Protein Data Bank
Cited by: 36
Author(s): Dmytro Guzenko, S.K. Burley, José M. Duarte
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0241099

In-stream habitat availability for river dolphins in response to flow: Use of ecological integrity to manage river flows
Cited by: 5
Author(s): Shambhu Paudel, John L. Koprowski, Usha Thakuri, Ajay Karki
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pgen.1009778

IGSF11 is required for pericentric heterochromatin dissociation during meiotic diplotene
Cited by: 5
Author(s): Bin Chen, Gengzhen Zhu, An Yan, Jing He, Yang Liu, Lin Li, Xuerui Yang, Dong Chen, Kehkooi Kee
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pgen.1009625

Light affects behavioral despair involving the clock gene Period 1
Cited by: 16
Author(s): Iwona Olejniczak, Jürgen A. Ripperger, Federica Sandrelli, Anna Schnell, Laureen Mansencal-Strittmatter, Katrin S. Wendrich, Ka Yi Hui, Andrea Brenna, Naïla Ben Fredj, Urs Albrecht
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0224933

Qualification programmes for immigrant health professionals: A systematic review
Cited by: 10
Author(s): Sidra Khan‐Gökkaya, Sanna Higgen, Mike Mösko
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0255612

Comparative genome analysis of Salmonella enterica serovar Gallinarum biovars Pullorum and Gallinarum decodes strain specific genes
Cited by: 10
Author(s): Rajesh Kumar Vaid, Zoozeal Thakur, Taruna Anand, Sanjay Kumar, Bhupendra Nath Tripathi
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pgen.1009523

Aicardi-Goutières syndrome-associated gene SAMHD1 preserves genome integrity by preventing R-loop formation at transcription–replication conflict regions
Cited by: 25
Author(s): Kiwon Park, Jeongmin Ryoo, Heena Jeong, Minsu Kim, Sungwon Lee, Sung-Yeon Hwang, Ji-Young Ahn, Doyeon Kim, Hyungseok C. Moon, Daehyun Baek, Kwangsoo Kim, Hye Yoon Park, Kwangseog Ahn
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0246333

Spatial distribution of advanced stage diagnosis and mortality of breast cancer: Socioeconomic and health service offer inequalities in Brazil
Cited by: 4
Author(s): Nayara Priscila Dantas de Oliveira, Marianna de Camargo Cancela, Luciana Martins, Dyego Leandro Bezerra de Souza
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pone.0235155

Learning to localize sounds in a highly reverberant environment: Machine-learning tracking of dolphin whistle-like sounds in a pool
Cited by: 3
Author(s): Sean Woodward, Diana Reiss, Marcelo O. Magnasco
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pcbi.1009086

Mixture-of-Experts Variational Autoencoder for clustering and generating from similarity-based representations on single cell data
Cited by: 11
Author(s): Andreas Köpf, Vincent Fortuin, Vignesh Ram Somnath, Manfred Claassen
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0221828

Dietary inulin alters the gut microbiome, enhances systemic metabolism and reduces neuroinflammation in an APOE4 mouse model
Cited by: 73
Author(s): Jared D. Hoffman, Lucille M. Yanckello, George E. Chlipala, Tyler C. Hammond, Scott McCulloch, Ishita Parikh, Sydney Sun, Josh M. Morganti, Stefan J. Green, Ai-Ling Lin
Software Mentions: 3
Published: about 7 years ago

10.1371/journal.pntd.0008234

Whole genome sequencing of Plasmodium vivax isolates reveals frequent sequence and structural polymorphisms in erythrocyte binding genes
Cited by: 20
Author(s): Anthony M. Ford, Daniel Kepple, Beka Raya Abagero, Jordan Connors, Richard D. Pearson, Sarah Auburn, Sisay Getachew, Colby T. Ford, Karthigayan Gunalan, Louis H. Miller, Daniel Janies, Julian C. Rayner, Guiyun Yan, Delenasaw Yewhalaw, Eugenia Lo
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0237933

Defining the relationship between maternal care behavior and sensory development in Wistar rats: Auditory periphery development, eye opening and brain gene expression
Cited by: 5
Author(s): Jingyun Qiu, Preethi Singh, Geng Pan, Annalisa De Paolis, Frances A. Champagne, Jia Liu, Luís Cardoso, Adrián Rodríguez-Contreras
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0230007

Citizen science improves our understanding of the impact of soil management on wild pollinator abundance in agroecosystems
Cited by: 17
Author(s): Logan R. Appenfeller, Sarah Lloyd, Zsofia Szendrei
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0242071

Cultural variation in young children’s social motivation for peer collaboration and its relation to the ontogeny of Theory of Mind
Cited by: 6
Author(s): Roman Stengelin, Robert Hepach, Daniel B. M. Haun
Software Mentions: 3
Published: almost 6 years ago