Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: Navigator
https://packages.ecosyste.ms/registries/pypi.org/packages/Navigator
A framework to create simple, interactive command line tools.
4 versions
Latest release: about 9 years ago
319 downloads last month
Papers Mentioning Navigator 161
10.3389/fnsys.2013.00014
Neural responses to sounds presented on and off the beat of ecologically valid musicCited by: 31
Author(s): Adam Tierney, Nina Kraus
Software Mentions: 1
Published: almost 12 years ago
10.1186/1742-9994-2-5
Cited by: 469Author(s): Miguel Vences, Meike Thomas, Arie van der Meijden, Ylenia Chiari, David R. Vieites
Software Mentions: 1
Published: almost 20 years ago
10.1186/ar4510
The classification of Crithidia luciliae immunofluorescence test (CLIFT) using a novel automated systemCited by: 9
Author(s): Francesca Buzzulini, Amelia Rigon, Paolo Soda, Leonardo Onofri, María Infantino, Luisa Arcarese, Giulio Iannello, Antonella Afeltra
Software Mentions: 1
Published: almost 11 years ago
10.1590/S1415-47572010005000053
Thaptomys Thomas 1915 (Rodentia, Sigmodontinae, Akodontini) with karyotypes 2n = 50, FN = 48, and 2n = 52, FN = 52: two monophyletic lineages recovered by molecular phylogenyCited by: 8
Author(s): Karen Ventura, Maria José de Jesus Silva, Yatiyo Yonenaga‐Yassuda
Software Mentions: 1
Published: over 14 years ago
10.1186/gb-2009-10-8-r84
MouseCyc: a curated biochemical pathways database for the laboratory mouseCited by: 50
Author(s): Alexei V. Evsikov, M. Eileen Dolan, Michael P Genrich, Emily Patek, Carol J. Bult
Software Mentions: 1
Published: almost 16 years ago
10.1186/1746-160X-3-29
Unilateral congenital elongation of the cervical part of the internal carotid artery with kinking and looping: two case reports and review of the literatureCited by: 17
Author(s): Ovchinnikov Nikolai, Ramesh T. Rao, Seema Rao
Software Mentions: 1
Published: over 17 years ago
10.1186/s12961-016-0165-5
Is there enough research output of EU projects available to assess and improve health system performance? An attempt to understand and categorise the output of EU projects conducted between 2002 and 2012Cited by: 5
Author(s): Britta Zander, Reinhard Busse
Software Mentions: 1
Published: over 7 years ago
10.1007/s00251-008-0333-z
Comparative genetics of a highly divergent DRB microsatellite in different macaque speciesCited by: 29
Author(s): Nanine de Groot, Gaby G. M. Doxiadis, Annemiek J. M. de Vos-Rouweler, Natasja G. de Groot, Ernst J. Verschoor, Ronald E. Bontrop
Software Mentions: 1
Published: about 16 years ago
10.1007/s00251-018-1085-z
Determining Mhc-DRB profiles in wild populations of three congeneric true lemur species by noninvasive methodsCited by: 3
Author(s): I.I. de Winter, Tamar Qurkhuli, Nanine de Groot, Annemiek J. M. de Vos-Rouweler, Pim van Hooft, Ignas M. A. Heitkönig, Herbert H. T. Prins, Ronald E. Bontrop, Gaby G. M. Doxiadis
Software Mentions: 1
Published: about 6 years ago
10.18632/oncotarget.10053
Novel histopathologic feature identified through image analysis augments stage II colorectal cancer clinical reportingCited by: 21
Author(s): Peter D. Caie, Ying Zhou, Arran Turnbull, Anca Oniscu, David J. Harrison
Software Mentions: 1
Published: over 8 years ago
10.1186/s40635-019-0224-7
The haemodynamic effects of crystalloid and colloid volume resuscitation on primary, derived and efficiency variables in post-CABG patientsCited by: 4
Author(s): Søren Søndergaard, J. Skytte Larsson, Per Werner Möller
Software Mentions: 1
Published: over 5 years ago
10.1002/acm2.12431
Evaluation of automatic contour propagation in T2-weighted 4DMRI for normal-tissue motion assessment using internal organ-at-risk volume (IRV)Cited by: 8
Author(s): Jingjing Zhang, Svetlana V. Markova, Antonio Rubial García, Kirk Huang, Xiaolei Nie, Wookjin Choi, Wei Lu, Abraham J. Wu, Andreas Rimner, Guang Li
Software Mentions: 1
Published: over 6 years ago
10.1186/1532-429X-15-S1-T6
Imaging strategies of coarctation repairsCited by: 0
Author(s): Michelle Walkden, Alison Fletcher, Charles Peebles, James Shambrook, S. Harden
Software Mentions: 1
Published: almost 12 years ago
10.1007/s12265-012-9425-0
Early Results of Sarcomeric Gene Screening from the Egyptian National BA-HCM ProgramCited by: 32
Author(s): Heba Sh. Kassem, Remon S. Azer, Maha Saber-Ayad, Sarah Moharem-Elgamal, Gehan Magdy, Ahmed ElGuindy, Fabiola Cecchi, Iacopo Olivotto, Magdi H. Yacoub
Software Mentions: 1
Published: almost 12 years ago
10.1083/jcb.201812081
High-throughput ultrastructure screening using electron microscopy and fluorescent barcodingCited by: 17
Author(s): Yury S. Bykov, Nir Cohen, Natalia Gabrielli, Hetty E Manenschijn, Sonja Welsch, Petr Chlanda, Wanda Kukulski, Kiran R. Patil, Maya Schuldiner, John Briggs
Software Mentions: 1
Published: over 5 years ago
10.1242/jcs.219550
Spatial positioning of EB family proteins at microtubule tips involves distinct nucleotide-dependent binding propertiesCited by: 37
Author(s): Daniel Röth, Benjamin P. Fitton, Nikola Paul Chmel, Natalia Wasiluk, Anne Straube
Software Mentions: 1
Published: almost 7 years ago
10.1186/1758-2946-6-S1-P14
Fishing out the signal in polypharmacological high-throughput screening data using novel navigator cheminformatics softwareCited by: 1
Author(s): Denis Fourches, Alexander Tropsha
Software Mentions: 1
Published: over 10 years ago
10.1186/s13321-016-0155-1
Molmil: a molecular viewer for the PDB and beyondCited by: 54
Author(s): Gert‐Jan Bekker, Haruki Nakamura, Akira R. Kinjo
Software Mentions: 1
Published: about 8 years ago
10.18632/oncotarget.10329
Thyroid hormone synthesis: a potential target of a Chinese herbal formula Haizao Yuhu Decoction acting on iodine-deficient goiterCited by: 22
Author(s): Yanqiong Zhang, Yuting Li, Xia Mao, Yan Chen, Xiaodong Guo, Qiuyan Guo, Zhenli Liu, Zhilong Song, Na Lin
Software Mentions: 1
Published: over 8 years ago
10.1186/s13690-016-0173-5
Health system performance assessment landscape at the EU level: a structured synthesis of actors and actionsCited by: 9
Author(s): Nataša Perić, Maria M. Hofmarcher-Holzhacker, Judit Simon
Software Mentions: 1
Published: almost 8 years ago
10.1590/1518-8345.3258.3275
Nurse Navigator: development of a program for BrazilCited by: 8
Author(s): Fernanda Felipe Pautasso, Thafarel Camargo Lobo, Cecília Dias Flores, Rita Catalina Aquino Caregnato
Software Mentions: 1
Published: almost 5 years ago
10.1038/sdata.2018.109
Sixty-one thousand recent planktonic foraminifera from the Atlantic OceanCited by: 9
Author(s): Leanne E. Elder, Allison Y. Hsiang, Keith E. Nelson, Luke C. Strotz, Sara S. Kahanamoku, Pincelli M. Hull
Software Mentions: 1
Published: about 6 years ago
10.1038/srep09463
Uncovering pharmacological mechanisms of Wu-tou decoction acting on rheumatoid arthritis through systems approaches: drug-target prediction, network analysis and experimental validationCited by: 81
Author(s): Yanqiong Zhang, Ming Bai, Bo Zhang, Chunfang Liu, Qiuyan Guo, Yehuan Sun, Danhua Wang, Chao Wang, Yini Jiang, Na Lin, Shao Li
Software Mentions: 1
Published: over 9 years ago
10.3390/jpm10040205
Analysis of miRNA Expression in Patients with Rheumatoid Arthritis during Olokizumab TreatmentCited by: 5
Author(s): Irina V. Bure, Dmitry S. Mikhaylenko, Ekaterina Kuznetsova, Е. А. Алексеева, Kristina I. Bondareva, А.И. Калинкин, Alexander N. Lukashev, Vadim V. Tarasov, Andrey A. Zamyatnin, Marina V. Nemtsova
Software Mentions: 1
Published: about 4 years ago
10.1038/srep41925
Therapeutic effects of Euphorbia Pekinensis and Glycyrrhiza glabra on Hepatocellular Carcinoma Ascites Partially Via Regulating the Frk-Arhgdib-Inpp5d-Avpr2-Aqp4 Signal AxisCited by: 8
Author(s): Yanqiong Zhang, Yan Chen, Yuting Li, Xia Mao, Weiwei Tao, Yuping Tang, Yi-Ting Lin, Qiuyan Guo, Duan Jing-ao, Na Lin
Software Mentions: 1
Published: almost 8 years ago
10.1038/s41598-019-38686-5
Prevalence and serological profile of anti-DFS70 positive subjects from a routine ANA cohortCited by: 20
Author(s): Teresa Carbone, Vito Pafundi, Giuseppina Tramontano, Michele Gilio, Maria Carmela Padula, Angela Padula, Salvatore D’Angelo
Software Mentions: 1
Published: almost 6 years ago
10.1038/s41598-019-54188-w
Construction of miRNA-target networks using microRNA profiles of CVB3-infected HeLa cellsCited by: 9
Author(s): Hai Lan Yao, Mi Liu, Wen Jun Wang, Xin Ling Wang, Juan Song, Qin Song, Jun Han
Software Mentions: 1
Published: almost 5 years ago
10.1007/s11192-017-2387-x
Western classical music development: a statistical analysis of composers similarity, differentiation and evolutionCited by: 11
Author(s): Patrick Georges
Software Mentions: 1
Published: over 7 years ago
10.3390/antiox6040078
Total Phenolic and Yellow Pigment Contents and Antioxidant Activities of Durum Wheat Milling FractionsCited by: 17
Author(s): Bin Xiao Fu, Constance Chiremba, Curtis Pozniak, Kun Wang, Shin Nam
Software Mentions: 1
Published: about 7 years ago
10.3390/ani11030842
Influence of Calving Ease on In-Line Milk Lactose and Other Milk ComponentsCited by: 5
Author(s): Ramūnas Antanaitis, Vida Juozaitienė, Dovilė Malašauskienė, Mindaugas Televičius, Mingaudas Urbutis, Walter Baumgartner
Software Mentions: 1
Published: over 3 years ago
10.1155/2012/430138
Nestin Protein Is Phosphorylated in Adult Neural Stem/Progenitor Cells and Not Endothelial Progenitor CellsCited by: 27
Author(s): Jun Namiki, Shingo Suzuki, Takeshi Masuda, Yasushi Ishihama, Hideyuki Okano
Software Mentions: 1
Published: almost 13 years ago
10.3390/toxics9090222
Synthesis and Decontamination Effect on Chemical and Biological Agents of Benzoxonium-Like SaltsCited by: 2
Author(s): A. Markova, Michaela Hympanova, Marek Matula, Lukáš Prchal, Radek Sleha, Markéta Benková, Lenka Pulkrabkova, Ondřej Soukup, Zuzana Kročová, Daniel Jun, Jan Marek
Software Mentions: 1
Published: about 3 years ago
10.1128/mBio.03320-19
Role of Plasmodium falciparum Protein GEXP07 in Maurer’s Cleft Morphology, Knob Architecture, and P. falciparum EMP1 TraffickingCited by: 23
Author(s): Emma McHugh, Olivia M. S. Carmo, Adam J. Blanch, Oliver Looker, Boyin Liu, Snigdha Tiash, Dean Andrew, Steven Batinovic, Andy J. Y. Low, Hyun Jung Cho, Paul J. McMillan, Leann Tilley, Matthew W. A. Dixon
Software Mentions: 1
Published: over 4 years ago
10.1007/s00439-015-1620-z
Resolving the ancestry of Austronesian-speaking populationsCited by: 67
Author(s): Pedro Soares, J. Tréjaut, Teresa Rito, Bruno Cavadas, Catherine Hill, Ken Eng, Maru Mormina, Andreia Brandão, Ross M. Fraser, Tse−Yi Wang, Jun‐Hun Loo, Christopher Snell, Tsang‐Ming Ko, António Amorim, Maria Pala, Vincent Macaulay, David Bulbeck, James F. Wilson, Leonor Gusmão, Luı́sa Pereira, Stephen Oppenheimer, Min Lin, Martin B. Richards
Software Mentions: 1
Published: almost 9 years ago
10.1002/humu.21492
SOS1 mutations in Noonan syndrome: molecular spectrum, structural insights on pathogenic effects, and genotype-phenotype correlationsCited by: 95
Author(s): Francesca Lepri, Alessandro De Luca, Lorenzo Stella, Cesare Rossi, Giuseppina Baldassarre, Francesca Pantaleoni, Viviana Cordeddu, B Williams, Maria Lisa Dentici, Viviana Caputo, Serenella Venanzi, Michela Bonaguro, Ines Kavamura, Maria Felicia Faienza, Alba Pilotta, Franco Stanzial, Francesca Faravelli, Orazio Gabrielli, Bruno Marino, Giovanni Neri, Margherita Silengo, Giovanni Battista Ferrero, Isabella Torrrente, Angelo Selicorni, Laura Mazzanti, María Cristina Digilio, Giuseppe Zampino, Bruno Dallapiccola, Bruce D. Gelb, Marco Tartaglia
Software Mentions: 1
Published: over 13 years ago
10.1186/s40478-021-01172-z
Correlative light and electron microscopy suggests that mutant huntingtin dysregulates the endolysosomal pathway in presymptomatic Huntington’s diseaseCited by: 6
Author(s): Ya Zhou, Thomas R. Peskett, Christian Landles, John B. Warner, Kirupa Sathasivam, Edward J. Smith, Shu Chen, Ronald Wetzel, Hilal A. Lashuel, Gillian P. Bates, Helen R. Saibil
Software Mentions: 1
Published: over 3 years ago
10.1186/s13046-020-01605-y
PKM2 inhibition may reverse therapeutic resistance to transarterial chemoembolization in hepatocellular carcinomaCited by: 45
Author(s): Sean P. Martin, Valerie Fako, Hien Dang, Dana A. Dominguez, Subreen A. Khatib, Lichun Ma, Haiyang Wang, Wei Zheng, Xin Wei Wang
Software Mentions: 1
Published: over 4 years ago
10.1007/s10147-017-1196-9
The detection of sentinel lymph nodes in laparoscopic surgery can eliminate systemic lymphadenectomy for patients with early stage endometrial cancerCited by: 20
Author(s): Tomohito Tanaka, Yoshito Terai, Satoe Fujiwara, Yoshimichi Tanaka, Hiroshi Sasaki, Satoshi Tsunetoh, Kazuhide Yamamoto, Takashi Yamada, Masahide Ohmichi
Software Mentions: 1
Published: about 7 years ago
10.3390/jof7010060
Differential miRNA Expression in Human Macrophage-Like Cells Infected with Histoplasma capsulatum Yeasts Cultured in Planktonic and Biofilm FormsCited by: 1
Author(s): Nayla de Souza Pitangui, Júnya de Lacorte Singulani, Janaína de Cássia Orlandi Sardi, Paula Carolina de Souza, Gabriela Rodríguez-Arellanes, Blanca Estela Garcı́a-Pérez, Francisco J. Enguita, Fernando Rogério Pavan, Mária Lucía Taylor, María José Soares Mendes-Giannini, Ana Marisa Fusco‐Almeida
Software Mentions: 1
Published: almost 4 years ago
10.1186/s13045-020-01026-6
The management of metastatic GIST: current standard and investigational therapeuticsCited by: 85
Author(s): Ciara M. Kelly, L. Gutiérrez Sainz, Ping Chi
Software Mentions: 1
Published: almost 4 years ago
10.1155/2012/982894
A Pilot Study on Cortical Auditory Evoked Potentials in Children: Aided CAEPs Reflect Improved High-Frequency Audibility with Frequency Compression Hearing Aid TechnologyCited by: 38
Author(s): Danielle Glista, Vijayalakshmi Easwar, David W. Purcell, Susan Scollie
Software Mentions: 1
Published: almost 13 years ago
10.1186/s12910-017-0191-z
The Picture Talk Project: Starting a Conversation with Community Leaders on Research with Remote Aboriginal Communities of AustraliaCited by: 10
Author(s): Emily Fitzpatrick, Gaynor Macdonald, Alexandra Martiniuk, Heather D’Antoine, June Oscar, Maureen Carter, Tom Lawford, Elizabeth J Elliott
Software Mentions: 1
Published: over 7 years ago
10.1186/1471-2350-9-71
Autosomal dominant hereditary spastic paraplegia: Novel mutations in the REEP1 gene (SPG31)Cited by: 35
Author(s): Katharina J Schlang, Larissa Arning, Jörg T. Epplen, Susanne Stemmler
Software Mentions: 1
Published: over 16 years ago
10.1186/1471-2350-14-37
A combined targeted mutation analysis of IRF6 gene would be useful in the first screening of oral facial cleftsCited by: 14
Author(s): Yah-Huei Wu-Chou, Lun-Jou Lo, Kuo-Ting Philip Chen, Chun-Shin Frank Chang, Yu-Ray Chen
Software Mentions: 1
Published: over 11 years ago
10.1186/1755-8794-3-15
Peripheral blood gene expression patterns discriminate among chronic inflammatory diseases and healthy controls and identify novel targetsCited by: 97
Author(s): Bertalan Meskó, Szilárd Póliska, Andrea Szegedi, Zoltán Szekanecz, Károly Palatka, Mária Papp, László Nagy
Software Mentions: 1
Published: over 14 years ago
10.1186/s12911-020-1088-1
Creating value with eHealth: identification of the value proposition with key stakeholders for the resilience navigator appCited by: 13
Author(s): Aniek Lentferink, Louis Polstra, Austin D’Souza, Hilbrand Oldenhuis, Hugo Velthuijsen, Lisette van Gemert-Pijnen
Software Mentions: 1
Published: over 4 years ago
10.1186/1756-6649-12-1
Navigator channel adaptation to reconstruct three dimensional heart volumes from two dimensional radiotherapy planning dataCited by: 7
Author(s): Angela Ng, Thanh Thi Nguyen, Joanne Moseley, David C. Hodgson, Michael B. Sharpe, Kristy K. Brock
Software Mentions: 1
Published: almost 13 years ago
10.1186/s12882-015-0060-2
Development of a chronic kidney disease patient navigator programCited by: 27
Author(s): Stacey E. Jolly, Sankar D. Navaneethan, Jesse D. Schold, Susana Arrigain, Victoria König, Yvette K. Burrucker, Jennifer Hyland, Priscilla Dann, Barbara Tucky, John W. Sharp, Joseph V. Nally
Software Mentions: 1
Published: over 9 years ago
10.1186/s12883-020-01881-3
Pain trajectories of dorsomedial prefrontal intermittent theta burst stimulation versus sham treatment in depressionCited by: 1
Author(s): Erika Malm, Wiebke Struckmann, Jonas Persson, Robert Bodén
Software Mentions: 1
Published: over 4 years ago
10.2196/14002
Design and Prestudy Assessment of a Dashboard for Presenting Self-Collected Health Data of Patients With Diabetes to Clinicians: Iterative Approach and Qualitative Case StudyCited by: 12
Author(s): Alain Giordanengo, Eirik Årsand, Ashenafi Zebene Woldaregay, Meghan Bradway, Astrid Grøttland, Gunnar Hartvigsen, Conceição Granja, Torbjørn Torsvik, Anne Hansen
Software Mentions: 1
Published: over 5 years ago
10.1186/s12870-015-0607-1
Diversity in boron toxicity tolerance of Australian barley (Hordeum vulgare L.) genotypesCited by: 14
Author(s): J. F. Hayes, Margaret Pallotta, Melissa Garcia, Mehmet Tufan Öz, Jay Rongala, Tim Sutton
Software Mentions: 1
Published: about 9 years ago
10.1186/s12888-020-02961-x
Influences on participation in a programme addressing loneliness among people with depression and anxiety: findings from the Community Navigator StudyCited by: 4
Author(s): Johanna Frerichs, Jo Billings, Nick Barber, Anjie Chhapia, Beverley Chipp, Prisha Shah, Anna Shorten, Theodora Stefanidou, Sonia Johnson, Brynmor Lloyd‐Evans, Vanessa Pinfold
Software Mentions: 1
Published: almost 4 years ago
10.1186/s12889-021-11399-z
Thetha Nami: participatory development of a peer-navigator intervention to deliver biosocial HIV prevention for adolescents and youth in rural South AfricaCited by: 21
Author(s): Maryam Shahmanesh, Nonhlanhla Okesola, Natsayi Chimbindi, Thembelihle Zuma, Sakhile Mdluli, Nondumiso Mthiyane, Oluwafemi Adeagbo, Jaco Dreyer, Carina Herbst, Nuala McGrath, Guy Harling, Lorraine Sherr, Janet Seeley
Software Mentions: 1
Published: over 3 years ago
10.1186/1471-2458-6-215
Development and evaluation of a youth mental health community awareness campaign – The Compass StrategyCited by: 159
Author(s): Annemarie Wright, Patrick D. McGorry, Meredith Harris, Anthony F Jorm, Kerryn Pennell
Software Mentions: 1
Published: over 18 years ago
10.1186/s12917-020-02284-9
The secondary KIT mutation p.Ala510Val in a cutaneous mast cell tumour carrying the activating mutation p.Asn508Ile confers resistance to masitinib in dogsCited by: 4
Author(s): Fabio Gentilini, María Elena Turba, Claire Dally, Masamine Takanosu, Sena Kurita, Makoto Bonkobara
Software Mentions: 1
Published: almost 5 years ago
10.1186/s12910-019-0349-y
The picture talk project: Aboriginal community input on consent for researchCited by: 7
Author(s): Emily Fitzpatrick, Gaynor Macdonald, Alexandra Martiniuk, June Oscar, Heather D’Antoine, Maureen Carter, Tom Lawford, Elizabeth J Elliott
Software Mentions: 1
Published: almost 6 years ago
10.1155/2019/8930904
Otitis Media: Long-Term Effect on Central Auditory Nervous SystemCited by: 15
Author(s): Maria Francisca Colella-Santos, Caroline Donadon, Milaine Dominici Sanfins, Letícia Reis Borges
Software Mentions: 1
Published: over 5 years ago
10.1155/2013/379438
Paired Ductal Carcinoma<i>In Situ</i>and Invasive Breast Cancer Lesions in the D-Loop of the Mitochondrial Genome Indicate a Cancerization Field EffectCited by: 8
Author(s): Andrea Maggrah, Kerry Robinson, Jennifer Creed, Roy Wittock, Ken Gehman, Teresa Gehman, Helen Brown, Andrew Harbottle, M. Kent Froberg, D Klein, Brian Reguly, Ryan Parr
Software Mentions: 1
Published: almost 12 years ago
10.1186/s12913-018-2889-0
Navigation delivery models and roles of navigators in primary care: a scoping literature reviewCited by: 128
Author(s): Nancy Carter, Ruta Valaitis, Annie Lam, Janice Feather, Jennifer Nicholl, Laura Cleghorn
Software Mentions: 1
Published: almost 7 years ago
10.1186/s12913-021-06372-w
A randomized wait-list controlled trial of a social support intervention for caregivers of patients with primary malignant brain tumorCited by: 5
Author(s): Maija Reblin, Dana Ketcher, Rachael McCormick, Veronica Barrios-Monroy, Steven K. Sutton, Bradley Zebrack, Kristen J. Wells, Solmaz Sahebjam, Peter Forsyth, Margaret M. Byrne
Software Mentions: 1
Published: over 3 years ago