Projects: pypi: NGSpeciesID
https://packages.ecosyste.ms/registries/pypi.org/packages/NGSpeciesID
Reconstructs viral consensus sequences from a set of ONT reads.
19 versions
Latest release: about 3 years ago
79 downloads last month
Enhanced Analysis
Educational Contributors:
kxs624@psu.edu
Repository Activity:
Repository Owner:
Kristoffer (user)
README Analysis:
DOI Found
Science Score: 95/100
Starting Score: 100 points
Bonuses:
-
+20
Educational commit emails
1 contributors with educational email addresses -
+6
Science terms in README
3 scientific terms found in README -
+10
DOI references
1 DOI references found in README
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-15
No science keywords
No scientific terms found in keywords/classifiers -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (95)
Papers Mentioning NGSpeciesID 3
10.1002/ece3.7146
NGSpeciesID: DNA barcode and amplicon consensus generation from long‐read sequencing dataCited by: 22
Author(s): Kristoffer Sahlin, Marisa Lim, Stefan Prost
Software Mentions: 4
Published: over 5 years ago
10.1186/s12915-021-01141-x
ONTbarcoder and MinION barcodes aid biodiversity discovery and identification by everyone, for everyoneCited by: 56
Author(s): Amrita Srivathsan, Leshon Lee, Kazutaka Katoh, Emily Hartop, Sujatha Narayanan Kutty, Johnathan Wong, Darren C. J. Yeo, Rudolf Meier
Software Mentions: 3
Published: almost 5 years ago
10.1042/ETLS20200287
Nanopore sequencing in non-human forensic geneticsCited by: 4
Author(s): Rob Ogden, Nina Vasiljevic, Stefan Prost
Software Mentions: 3
Published: about 5 years ago