Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: Meneco

https://packages.ecosyste.ms/registries/pypi.org/packages/Meneco

Metabolic Network Completion. Compute minimal completions to your draft network with reactions from a repair network.
17 versions
Latest release: over 2 years ago
1 dependent package
95 downloads last month

Papers Mentioning Meneco 4

10.1371/journal.pcbi.1006146

Traceability, reproducibility and wiki-exploration for “à-la-carte” reconstructions of genome-scale metabolic models
Cited by: 70
Author(s): Meaziane Aite, Marie Chevallier, Clémence Frioux, Camille Trottier, Jeanne Got, María Paz Cortés, Sebastián N. Mendoza, Grégory Carrier, Olivier Dameron, Nicolas Guillaudeux, Mauricio Latorre, Nicolás Loira, Gabriel V. Markov, Alejandro Maass, Anne Siegel
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pcbi.1005276

Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks
Cited by: 68
Author(s): Sylvain Prigent, Clémence Frioux, Simon M. Dittami, Sven Thiele, Abdelhalim Larhlimi, Guillaume Collet, Fabien Gutknecht, Jeanne Got, Damien Eveillard, Jérémie Bourdon, Frédéric Plewniak, Thierry Tonon, Anne Siegel
Software Mentions: 3
Published: over 7 years ago

10.3389/fmolb.2020.591406

ReCodLiver0.9: Overcoming Challenges in Genome-Scale Metabolic Reconstruction of a Non-model Species
Cited by: 9
Author(s): Eileen Marie Hanna, Xiaokang Zhang, Marta Eide, Shirin Fallahi, Tomasz Furmanek, Fekadu Yadetie, Daniel C. Zielinski, Anders Goksøyr, Inge Jonassen
Software Mentions: 3
Published: almost 4 years ago

10.3390/antiox8110564

Genome–Scale Metabolic Networks Shed Light on the Carotenoid Biosynthesis Pathway in the Brown Algae Saccharina japonica and Cladosiphon okamuranus
Cited by: 16
Author(s): Delphine Nègre, Méziane Aïte, Arnaud Belcour, Clémence Frioux, Loraine Brillet-Guéguen, Xi Liu, Philippe Bordron, Olivier Godfroy, Agnieszka P. Lipinska, Catherine Leblanc, Anne Siegel, Simon M. Dittami, Matthieu Le Corre, Gabriel V. Markov
Software Mentions: 2
Published: almost 5 years ago