Ecosyste.ms: Papers

10.1007/s10509-018-3277-2

New UV-source catalogs, UV spectral database, UV variables and science tools from the GALEX surveys
Cited by: 7
Author(s): Luciana Bianchi, Alexander de la Vega, B. Shiao, R. C. Bohlin
Software Mentions: 2
Published: over 6 years ago

10.1128/mSphere.00176-21

NanH Is Produced by Sporulating Cultures of Clostridium perfringens Type F Food Poisoning Strains and Enhances the Cytotoxicity of C. perfringens Enterotoxin
Cited by: 4
Author(s): Jihong Li, Bruce A. McClane
Software Mentions: 2
Published: over 3 years ago

10.1186/1751-0147-53-S1-S5

WorldFengur - the studbook of origin for the Icelandic horse
Cited by: 9
Author(s): Jón Baldur Lorange
Software Mentions: 2
Published: over 13 years ago

10.1155/2014/245347

Long-Term Effect of Interactive Online Dietician Weight Loss Advice in General Practice (LIVA) Protocol for a Randomized Controlled Trial
Cited by: 10
Author(s): Carl J. Brandt, Vibeke Brandt, Mathilde Pedersen, Dorte Glintborg, Søren Toubro, Jesper Bo Nielsen, Günther Eysenbach, Kirsten Brandt, Jens Søndergaard
Software Mentions: 2
Published: over 10 years ago

10.1186/s10194-018-0865-z

Factors associated with acute medication overuse in people with migraine: results from the 2017 migraine in America symptoms and treatment (MAST) study
Cited by: 77
Author(s): Todd J. Schwedt, Aftab Alam, Michael L. Reed, Kristina M. Fanning, Sagar Munjal, Dawn C. Buse, David W. Dodick, Richard B. Lipton
Software Mentions: 2
Published: over 6 years ago

10.1186/s10194-019-1064-2

TRPM8 genetic variant is associated with chronic migraine and allodynia
Cited by: 22
Author(s): Yu Hsiang Ling, Shih‐Pin Chen, Cathy S.J. Fann, Shuu Jiun Wang, Shuu Jiun Wang
Software Mentions: 2
Published: almost 5 years ago

10.1186/s10194-020-1084-y

Comorbid and co-occurring conditions in migraine and associated risk of increasing headache pain intensity and headache frequency: results of the migraine in America symptoms and treatment (MAST) study
Cited by: 120
Author(s): Dawn C. Buse, Michael L. Reed, Kristina M. Fanning, Ryan Bostic, David W. Dodick, Todd J. Schwedt, Sagar Munjal, Preeti Singh, Richard B. Lipton
Software Mentions: 2
Published: over 4 years ago

10.1155/2014/643940

Leptospirosis in Vellore: A Clinical and Serological Study
Cited by: 12
Author(s): G. Vimala, Asha Rani, Vani Gopal
Software Mentions: 2
Published: almost 11 years ago

10.5713/ajas.17.0780

The use of data mining methods for dystocia detection in Polish Holstein-Friesian Black-and-White cattle
Cited by: 5
Author(s): Daniel Zaborski, Witold Stanisław Proskura, Wilhelm Grzesiak
Software Mentions: 2
Published: about 6 years ago

10.2478/hukin-2014-0069

Effect of a MAST Exercise Program on Anthropometric Parameters, Physical Fitness, and Serum Lipid Levels in Obese Postmenopausal Women
Cited by: 10
Author(s): Bartosz Trąbka, Igor Z. Zubrzycki, Zbigniew Ossowski, Olgierd Bojke, Anna Clarke, Magdalena Wiącek, Ewelina Latosik
Software Mentions: 2
Published: about 10 years ago

10.2478/hukin-2014-0078

Qualitative Task Analysis to Enhance Sports Characterization: A Surfing Case Study
Cited by: 13
Author(s): Miguel Moreira, César Peixoto
Software Mentions: 2
Published: about 10 years ago

10.1111/ijs.12487

Targeting Aspirin in Acute Disabling Ischemic Stroke: An Individual Patient Data Meta-Analysis of Three Large Randomized Trials
Cited by: 5
Author(s): Douglas Thompson, Gordon Murray, Livia Candelise, Zhengming Chen, Peter Sandercock, William Whiteley
Software Mentions: 2
Published: over 9 years ago

10.1017/S0266462315000574

ASSESSMENT OF MAST IN EUROPEAN PATIENT-CENTERED TELEMEDICINE PILOTS
Cited by: 18
Author(s): Anne Granstrøm Ekeland, Astrid Grøttland
Software Mentions: 2
Published: almost 10 years ago

10.5195/ijt.2021.6367

Ethical Issues Linked to the Development of Telerehabilitation: A Qualitative Study
Cited by: 2
Author(s): Marin Guy, Alexandra Blary, Joël Ladner, Maxime Gilliaux
Software Mentions: 2
Published: over 3 years ago

10.22038/ijbms.2020.45394.10561

In silico analysis and expression of a new chimeric antigen as a vaccine candidate against cutaneous leishmaniasis.
Cited by: 1
Author(s): Leila Motamedpour, Abdolhossein Dalimi, Majid Pirestani, Fatemeh Ghaffarifar
Software Mentions: 2
Published: about 4 years ago

10.3390/ijerph15081639

Sexual Function of Postmenopausal Women Addicted to Alcohol
Cited by: 6
Author(s): Anna Jenczura, Mariola Czajkowska, Agnieszka Skrzypulec-Frankel, Violetta Skrzypulec-Plinta, Agnieszka Drosdzol‐Cop
Software Mentions: 2
Published: over 6 years ago

10.2196/mhealth.3535

A Low-Intensity Mobile Health Intervention With and Without Health Counseling for Persons With Type 2 Diabetes, Part 1: Baseline and Short-Term Results From a Randomized Controlled Trial in the Norwegian Part of RENEWING HEALTH
Cited by: 95
Author(s): Astrid Torbjørnsen, Anne Karen Jenum, Milada Cvancarova Småstuen, Eirik Årsand, Heidi Holmen, Astrid Klopstad Wahl, Lis Ribu
Software Mentions: 2
Published: almost 10 years ago

10.1186/2046-9063-9-16

Diversity of picoeukaryotes at an oligotrophic site off the Northeastern Red Sea Coast
Cited by: 28
Author(s): Francisco J. Acosta, David Kamanda Ngugi, Ulrich Stingl
Software Mentions: 2
Published: over 11 years ago

10.1186/s13756-019-0572-9

Extended spectrum beta-lactamase producing Enterobacterales faecal carriage in a medical intensive care unit: low rates of cross-transmission and infection
Cited by: 15
Author(s): Renaud Prével, Alexandre Boyer, Fatima M’Zali, Thibaut Cockenpot, A. Lashéras, Véronique Dubois, Didier Gruson
Software Mentions: 2
Published: over 5 years ago

10.1093/infdis/jiaa002

Neisseria gonorrhoeae Population Genomics: Use of the Gonococcal Core Genome to Improve Surveillance of Antimicrobial Resistance
Cited by: 29
Author(s): Odile B. Harrison, Ana Cehovin, Jessica Skett, Keith A. Jolley, Paola Massi, Caroline A. Genco, Christoph M. Tang, Martin C. J. Maiden
Software Mentions: 2
Published: over 4 years ago

10.1673/031.008.5301

Odorant Receptor C-Terminal Motifs in Divergent Insect Species
Cited by: 15
Author(s): Raymond R. Miller, Zhijian Tu
Software Mentions: 2
Published: about 16 years ago

10.7448/IAS.18.1.20226

The green shoots of a novel training programme: progress and identified key actions to providing services to MSM at Kenyan health facilities
Cited by: 26
Author(s): Elise van der Elst, Bernadette Kombo, Evans Gichuru, Anisa Omar, Helgar Musyoki, Susan M. Graham, Adrian D. Smith, Eduard J. Sanders, Don Operario
Software Mentions: 2
Published: almost 10 years ago

10.1186/s13223-021-00525-6

Non-association between low vitamin d levels and aeroallergen-positivity evaluated using multiple allergen simultaneous test in Korean adults
Cited by: 0
Author(s): Jee Hye Wee, Sung Woo Cho, Jeong Whun Kim, Chae Seo Rhee
Software Mentions: 2
Published: over 3 years ago

10.1186/s12879-021-06262-w

Antimicrobial resistance and molecular epidemiological typing of Neisseria gonorrhoeae isolates from Kyrgyzstan in Central Asia, 2012 and 2017
Cited by: 5
Author(s): Saliya Karymbaeva, Iryna Boiko, Susanne Jacobsson, Галина Григорьевна Мамаева, А. Ибраева, Dilara Usupova, Daniel Golparian, Magnus Unemo
Software Mentions: 2
Published: over 3 years ago

10.1186/s12879-015-0988-7

Molecular epidemiology of Neisseria gonorrhoeae using multi-antigen sequence typing and pulse-field gel electrophoresis in highly endemic Western Australian populations
Cited by: 9
Author(s): Lyn C. O’Reilly, Namraj Goire, Rachel E. Fisk, David Speers
Software Mentions: 2
Published: over 9 years ago

10.1186/1471-2334-13-570

Neisseria gonorrhoeae and extended-spectrum cephalosporins in California: surveillance and molecular detection of mosaic penA
Cited by: 30
Author(s): Severin Gose, Duylinh Nguyen, Daniella Lowenberg, Michael C. Samuel, Heidi M. Bauer, Mark Pandori
Software Mentions: 2
Published: almost 11 years ago

10.1186/s12911-014-0124-4

Early telemedicine training and counselling after hospitalization in patients with severe chronic obstructive pulmonary disease: a feasibility study
Cited by: 32
Author(s): Lisbeth Kirstine Rosenbek Minet, Line Willads Hansen, Christian Bonde Pedersen, Ingrid Louise Titlestad, Jette Krøjgaard Christensen, Kristian Kidholm, Kathrine Rayce, Alison Bowes, Lilian Møllegård
Software Mentions: 2
Published: almost 10 years ago

10.1186/1471-2180-9-233

Topological analysis of a haloacid permease of a Burkholderi a sp. bacterium with a PhoA-LacZ reporter
Cited by: 11
Author(s): Yuk Man Tse, Manda Yu, Jwh Tsang
Software Mentions: 2
Published: about 15 years ago

10.1186/1471-2180-11-125

SO2426 is a positive regulator of siderophore expression in Shewanella oneidensis MR-1
Cited by: 0
Author(s): Kristene L. Henne, Xiu‐Feng Wan, Wei Wei, Danielle Thompson
Software Mentions: 2
Published: almost 14 years ago

10.1186/s12866-021-02186-2

Prevalence, population structure, distribution of serotypes, pilus islands and resistance genes among erythromycin-resistant colonizing and invasive Streptococcus agalactiae isolates recovered from pregnant and non-pregnant women in Isfahan, Iran
Cited by: 10
Author(s): Tahereh Motallebirad, Hossein Fazeli, Ataollah Ghahiri, Dariush Shokri, Saba Jalalifar, Sharareh Moghim, Bahram Nasr Esfahani
Software Mentions: 2
Published: over 3 years ago

10.1186/1471-2180-6-104

Identification of potential CepR regulated genes using a cep box motif-based search of the Burkholderia cenocepacia genome
Cited by: 27
Author(s): Catherine E. Chambers, Erika I. Lutter, Michelle B. Visser, Peggy P.Y. Law, Pamela A. Sokol
Software Mentions: 2
Published: almost 18 years ago

10.1186/s12882-017-0529-2

Cost-effectiveness of home telemonitoring in chronic kidney disease patients at different stages by a pragmatic randomized controlled trial (eNephro): rationale and study design
Cited by: 21
Author(s): Nathalie Thilly, Jacques Chanliau, Luc Frimat, Christian Combe, Pierre Merville, P. Chauveau, Pierre Bataille, Raymond Azar, David Laplaud, Christian Noël, Michèle Kessler
Software Mentions: 2
Published: over 7 years ago

10.1186/s12912-021-00654-8

Evaluation frameworks for digital nursing technologies: analysis, assessment, and guidance. An overview of the literature
Cited by: 7
Author(s): Tobias Krick
Software Mentions: 2
Published: over 3 years ago

10.1186/s12887-018-1178-8

Is there an association between vitamin D deficiency and adenotonsillar hypertrophy in children with sleep-disordered breathing?
Cited by: 16
Author(s): Ji-Hyeon Shin, Byung-Guk Kim, Soo Whan Kim, Sung Won Kim, Hojung Kim
Software Mentions: 2
Published: over 6 years ago

10.1186/1471-2229-14-9

Conserved CO-FT regulons contribute to the photoperiod flowering control in soybean
Cited by: 66
Author(s): Chengming Fan, Ruibo Hu, Xiaomei Zhang, Xu Wang, Wenjing Zhang, Qingzhe Zhang, Jianchao Ma, Yong-Fu Fu
Software Mentions: 2
Published: almost 11 years ago

10.1186/s12870-017-1056-9

Prediction and analysis of three gene families related to leaf rust (Puccinia triticina) resistance in wheat (Triticum aestivum L.)
Cited by: 12
Author(s): Fred Y. Peng, Rong‐Cai Yang
Software Mentions: 2
Published: over 7 years ago

10.1186/1471-2229-7-59

Genome-wide analysis of Aux/IAA and ARF gene families in Populus trichocarpa
Cited by: 211
Author(s): Udaya C. Kalluri, Stephen P. DiFazio, Amy M. Brunner, Gerald A. Tuskan
Software Mentions: 2
Published: almost 18 years ago

10.1186/s12870-017-1210-4

Divergent regulation of Arabidopsis SAUR genes: a focus on the SAUR10-clade
Cited by: 56
Author(s): Hilda van Mourik, Aalt D. J. van Dijk, Niek Stortenbeker, Gerco C. Angenent, Marian Bemer
Software Mentions: 2
Published: almost 7 years ago

10.1186/1471-2229-9-62

Molecular characterisation and genetic mapping of candidate genes for qualitative disease resistance in perennial ryegrass (Lolium perenne L.)
Cited by: 37
Author(s): Peter M. Dracatos, Noel O. I. Cogan, Tim Sawbridge, Anthony R. Gendall, K. F. Smith, Germán Spangenberg, John W. Forster
Software Mentions: 2
Published: over 15 years ago

10.1186/s12870-019-1749-3

Evolutionary conservation of MLO gene promoter signatures
Cited by: 12
Author(s): Giuseppe Andolfo, Paolo Iovieno, Luigi M. Ricciardi, Concetta Lotti, Edgardo Filippone, Stefano Pavan, Maria Raffaella Ercolano
Software Mentions: 2
Published: over 5 years ago

10.1186/1471-2229-14-44

EsDREB2B, a novel truncated DREB2-type transcription factor in the desert legume Eremosparton songoricum, enhances tolerance to multiple abiotic stresses in yeast and transgenic tobacco
Cited by: 64
Author(s): Xiaoshuang Li, Daoyuan Zhang, Haiyan Li, Yucheng Wang, Yuanming Zhang, Andrew J. Wood
Software Mentions: 2
Published: almost 11 years ago

10.1186/1471-2229-14-120

Defining the full tomato NB-LRR resistance gene repertoire using genomic and cDNA RenSeq
Cited by: 141
Author(s): Giuseppe Andolfo, Florian Jupe, Kamil Witek, Graham J. Etherington, Maria Raffaella Ercolano, Jonathan D. G. Jones
Software Mentions: 2
Published: over 10 years ago

10.1186/1471-2458-12-S2-A21

Selection of HMG-coenzyme A reductase inhibitors using multiattribute scoring tool
Cited by: 0
Author(s): Azuana Ramli, Syed Mohamed Aljunid, Saperi Sulong, Faridah Aryani Mohd Yusof
Software Mentions: 2
Published: about 12 years ago

10.1186/1752-0509-5-S2-S7

Combinatorial motif analysis of regulatory gene expression in Mafb deficient macrophages
Cited by: 5
Author(s): Mariko Morita, Megumi Nakamura, Michito Hamada, Satoru Takahashi
Software Mentions: 2
Published: almost 14 years ago

10.1093/bioinformatics/btv005

NLR-parser: rapid annotation of plant NLR complements
Cited by: 99
Author(s): Burkhard Steuernagel, Florian Jupe, Kamil Witek, Jonathan D. G. Jones, Brande B. H. Wulff
Software Mentions: 2
Published: almost 10 years ago

10.1186/s12913-021-06929-9

Facilitators and barriers for the implementation of telemedicine from a local government point of view - a cross-sectional survey in Germany
Cited by: 12
Author(s): Maja Maria Weißenfeld, Katja Goetz, Jost Steinhäuser
Software Mentions: 2
Published: about 3 years ago

10.1186/1745-6150-8-27

Identification of B-cell epitopes in an antigen for inducing specific class of antibodies
Cited by: 78
Author(s): Sudheer Gupta, Hifzur Rahman Ansari, Ankur Gautam, Gajendra P. S. Raghava
Software Mentions: 2
Published: about 11 years ago

10.1186/s12913-016-1281-1

Efficacy and cost effectiveness of telemedicine for improving access to care in the Paris region: study protocols for eight trials
Cited by: 14
Author(s): Nathanaël Charrier, Kevin Zarca, Isabelle Durand‐Zaleski, Christine Calinaud
Software Mentions: 2
Published: almost 9 years ago

10.1155/2021/5574789

In Silico Structural, Functional, and Phylogenetic Analysis of Cytochrome (CYPD) Protein Family
Cited by: 9
Author(s): Hafiz Ishfaq Ahmad, Gulnaz Afzal, Adil Jamal, Shumaila Kiran, Mueen Alam Khan, Khalid Mehmood, Zahid Kamran, Irfan Ahmed, Shakeel Ahmad, Asmar Ahmad, Javed Hussain, Sadaf Almas
Software Mentions: 2
Published: over 3 years ago

10.1155/2013/340513

Comparison of Three Multiple Allergen Simultaneous Tests: RIDA Allergy Screen, MAST Optigen, and Polycheck Allergy
Cited by: 22
Author(s): Minje Han, Sue Shin, Hyewon Park, Kyoung Un Park, Myoung Hee Park, Eun Young Song
Software Mentions: 2
Published: almost 12 years ago

10.1186/1471-2164-13-2

Yeast-based assay identifies novel Shh/Gli target genes in vertebrate development
Cited by: 18
Author(s): Luis A. Milla, Claudio R. Cortés, Christian Hödar, Maritza Oñate, Verónica Cambiazo, Shawn M. Burgess, Verónica Palma
Software Mentions: 2
Published: almost 13 years ago

10.3390/brainsci11091148

Now or Later? Stress-Induced Increase and Decrease in Choice Impulsivity Are Both Associated with Elevated Affective and Endocrine Responses
Cited by: 4
Author(s): Lisa Simon, Talita Jiryis, Roee Admon
Software Mentions: 2
Published: about 3 years ago

10.1186/s40644-017-0126-4

Proceedings of the International Cancer Imaging Society (ICIS) 17th Annual Teaching Course
Cited by: 1
Author(s):
Software Mentions: 2
Published: about 7 years ago

10.1002/cam4.3751

Additional radiotherapy to breast‐conserving surgery is an optional treatment for de novo stage IV breast cancer: A population‐based analysis
Cited by: 4
Author(s): Jun Wang, Shi‐Ping Yang, Ping Zhou, Chen-Lu Lian, Jian Lei, Hua Li, Zhen-Yu He, San‐Gang Wu
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12936-020-03154-3

Identification, molecular characterization and expression of aminopeptidase N-1 (APN-1) from Anopheles stephensi in SF9 cell line as a candidate molecule for developing a vaccine that interrupt malaria transmission
Cited by: 4
Author(s): Javad Dadgar Pakdel, Sedigheh Zakeri, Raz A, Navid Dinparast Djadid
Software Mentions: 2
Published: almost 5 years ago

10.1016/j.meteno.2016.01.004

Promiscuous plasmid replication in thermophiles: Use of a novel hyperthermophilic replicon for genetic manipulation of Clostridium thermocellum at its optimum growth temperature
Cited by: 15
Author(s): Joseph Groom, Daehwan Chung, Daniel G. Olson, Lee R. Lynd, Adam M. Guss, Janet Westpheling
Software Mentions: 2
Published: almost 8 years ago

10.1186/s12934-020-01301-8

Enhancement of bleomycin production in Streptomyces verticillus through global metabolic regulation of N-acetylglucosamine and assisted metabolic profiling analysis
Cited by: 14
Author(s): Hong Chen, Jiaqi Cui, Pan Wang, Xin Wang, Jianping Wen
Software Mentions: 2
Published: almost 5 years ago

10.1186/1475-2859-12-112

Transcriptome signatures of class I and III stress response deregulation in Lactobacillus plantarum reveal pleiotropic adaptation
Cited by: 18
Author(s): Hendrik W van Veen, Roger S. Bongers, Michiel Wels, Peter A. Bron, Michiel Kleerebezem
Software Mentions: 2
Published: about 11 years ago

10.1186/1475-2859-9-100

Physiological responses to folate overproduction in Lactobacillus plantarum WCFS1
Cited by: 19
Author(s): Arno Wegkamp, Astrid E. Mars, Magda Faijes, Douwe Molenaar, Ric C. H. de Vos, Sebastian Klaus, Andrew D. Hanson, Willem M. de Vos, Eddy J. Smid
Software Mentions: 2
Published: almost 14 years ago

10.1186/s12934-019-1258-y

Phosphate regulator PhoP directly and indirectly controls transcription of the erythromycin biosynthesis genes in Saccharopolyspora erythraea
Cited by: 13
Author(s): Ya Ming Xu, Di You, Lili Yao, Xiaohe Chu, Bang‐Ce Ye
Software Mentions: 2
Published: almost 5 years ago

10.1099/mgen.0.000076

NGMASTER: in silico multi-antigen sequence typing for Neisseria gonorrhoeae
Cited by: 18
Author(s): Jason C Kwong, Anders Gonçalves da Silva, Kristin Dyet, Deborah A. Williamson, Timothy P. Stinear, Benjamin P Howden, Torsten Seemann
Software Mentions: 2
Published: about 8 years ago

10.1002/mbo3.57

Phylogenetic composition and distribution of picoeukaryotes in the hypoxic northwestern coast of the <scp>G</scp> ulf of <scp>M</scp> exico
Cited by: 19
Author(s): Emma Rocke, Hongmei Jing, Hongbin Liu
Software Mentions: 2
Published: almost 12 years ago

10.1099/mic.0.000664

Antisense transcription in Pseudomonas aeruginosa
Cited by: 10
Author(s): Denitsa Eckweiler, Susanne Häußler
Software Mentions: 2
Published: over 6 years ago

10.1186/1759-8753-2-4

Plant centromeric retrotransposons: a structural and cytogenetic perspective
Cited by: 161
Author(s): Pavel Neumann, Alice Navrátilová, Andrea Koblížková, Eduard Kejnovský, Eva Hřibová, Roman Hobza, Alex Widmer, Jaroslav Doležel, Jiří Macas
Software Mentions: 2
Published: almost 14 years ago

10.1186/1471-2164-11-286

Most transcription factor binding sites are in a few mosaic classes of the human genome
Cited by: 1
Author(s): Katharine Evans
Software Mentions: 2
Published: almost 15 years ago

10.1186/1471-2164-13-191

Comparative genome analysis of central nitrogen metabolism and its control by GlnR in the class Bacilli
Cited by: 36
Author(s): Tom Groot Kormelink, Eric Koenders, Yanick Hagemeijer, Lex Overmars, Roland J. Siezen, Willem M. de Vos, Christof Francke
Software Mentions: 2
Published: over 12 years ago

10.1186/s12864-015-1216-y

Genome-wide analysis of the R2R3-MYB transcription factor genes in Chinese cabbage (Brassica rapa ssp. pekinensis) reveals their stress and hormone responsive patterns
Cited by: 64
Author(s): Zhen Wang, Jun Tang, Rong Hu, Peng Wu, Xilin Hou, Xiaoming Song, Ai‐Sheng Xiong
Software Mentions: 2
Published: almost 10 years ago

10.1186/1748-7188-9-16

Enumerating all maximal frequent subtrees in collections of phylogenetic trees
Cited by: 1
Author(s): A. Deepak, David Fernández-Baca
Software Mentions: 2
Published: over 10 years ago

10.7554/eLife.04517

Enhanced stability and polyadenylation of select mRNAs support rapid thermogenesis in the brown fat of a hibernator
Cited by: 28
Author(s): Katharine R. Grabek, Cecilia Diniz Behn, Gregory S. Barsh, Jay R. Hesselberth, Sandra L. Martin
Software Mentions: 2
Published: almost 10 years ago

10.1186/1471-2164-11-651

LAB-Secretome: a genome-scale comparative analysis of the predicted extracellular and surface-associated proteins of Lactic Acid Bacteria
Cited by: 79
Author(s): Miaomiao Zhou, Daniël H. J. Theunissen, Michiel Wels, Roland J. Siezen
Software Mentions: 2
Published: about 14 years ago

10.15252/msb.20145160

A system‐level model for the microbial regulatory genome
Cited by: 61
Author(s): Aaron N. Brooks, David J Reiss, Antoine Allard, Wei Wu, Diego M. Salvanha, Christopher L. Plaisier, Sriram Chandrasekaran, Min Pan, Amardeep Kaur, Nitin S. Baliga
Software Mentions: 2
Published: over 10 years ago

10.3390/vaccines8020252

Chimeric Vaccines Designed by Immunoinformatics-Activated Polyfunctional and Memory T Cells That Trigger Protection against Experimental Visceral Leishmaniasis
Cited by: 19
Author(s): Rory Cristiane Fortes de Brito, Jerônimo C. Ruiz, Jamille Mirelle de Oliveira Cardoso, Thais Lopes Valentim Di Paschoale Ostolin, Levi Eduardo Soares Reis, Fernando Augusto Siqueira Mathias, Rodrigo Dian de Oliveira Aguiar-Soares, Bruno Mendes Roatt, Rodrigo Corrêa-Oliveira, Daniela de Melo Resende, Alexandre Barbosa Reis
Software Mentions: 2
Published: over 4 years ago

10.3390/vaccines8020290

Immunoinformatics and Structural Analysis for Identification of Immunodominant Epitopes in SARS-CoV-2 as Potential Vaccine Targets
Cited by: 51
Author(s): Sumit Mukherjee, Dmitry Tworowski, Rajesh Detroja, Sunanda Biswas Mukherjee, Milana Frenkel‐Morgenstern
Software Mentions: 2
Published: over 4 years ago

10.1186/1743-422X-5-91

Correlating novel variable and conserved motifs in the Hemagglutinin protein with significant biological functions
Cited by: 4
Author(s): Deena M.A. Gendoo, Mahmoud ElHefnawi, Mark Werner, Rania Siam
Software Mentions: 2
Published: over 16 years ago

10.1186/1743-422X-8-379

Evolutionary variation of papillomavirus E2 protein and E2 binding sites
Cited by: 18
Author(s): Adam J. Rogers, Mackenzie Waltke, Peter C. Angeletti
Software Mentions: 2
Published: over 13 years ago

10.12669/pjms.342.14681

Detection and allergen analysis of serum IgE in pediatric patients with chronic urticaria
Cited by: 1
Author(s): Yi Zhou, Minmin Sheng, Mingyan Chen
Software Mentions: 2
Published: over 6 years ago

10.7717/peerj.6354

Genome-wide identification and comparative evolutionary analysis of the Dof transcription factor family in physic nut and castor bean
Cited by: 15
Author(s): Zhi Zou, Xicai Zhang
Software Mentions: 2
Published: almost 6 years ago

10.7717/peerj.9541

Anti-COVID-19 multi-epitope vaccine designs employing global viral genome sequences
Cited by: 17
Author(s): Tahreem Zaheer, Maaz Waseem, Walifa Waqar, Hamza Arshad Dar, Muhammad Shehroz, Kanwal Naz, Zaara Ishaq, Tahir Ahmad, Nimat Ullah, Syeda Marriam Bakhtiar, Syed Aun Muhammad, Amjad Ali
Software Mentions: 2
Published: over 4 years ago

10.7717/peerj.8062

Genome-wide identification and transcriptional expression analysis of superoxide dismutase (SOD) family in wheat (<i>Triticum aestivum</i>)
Cited by: 71
Author(s): Wenqiang Jiang, Lei Yang, Yan He, Haotian Z. Zhang, W. Li, Huaigu C. Chen, M. Dongfang, Jia Yin
Software Mentions: 2
Published: about 5 years ago

10.7717/peerj.10701

Genome-wide analysis of growth-regulating factors (GRFs) in <i>Triticum aestivum</i>
Cited by: 18
Author(s): Huang Wen-di, Yanan He, Lei Yang, Ciyong Lu, Yong‐Guan Zhu, Cai Sun, Dongfang Ma, Jia Yin
Software Mentions: 2
Published: almost 4 years ago

10.7717/peerj.9781

Genome-wide identification and expression analyses of R2R3-MYB transcription factor genes from two Orchid species
Cited by: 12
Author(s): Honghong Fan, Manli Cui, Ninghong Li, Xujuan Li, Yuxuan Liang, Lin Liu, Yongping Cai, Yi Lin
Software Mentions: 2
Published: about 4 years ago

10.1186/1471-2164-10-152

Histone acetylations mark origins of polycistronic transcription in Leishmania major
Cited by: 121
Author(s): Sean Thomas, Amanda Green, Nancy R. Sturm, David A. Campbell, Peter J. Myler
Software Mentions: 2
Published: over 15 years ago

10.3390/pharmacy8020107

The Mbeya Antimicrobial Stewardship Team: Implementing Antimicrobial Stewardship at a Zonal-Level Hospital in Southern Tanzania
Cited by: 16
Author(s): Jeffrey W. Hall, Jeannette Bouchard, P. Brandon Bookstaver, Matthew S. Haldeman, Peter Kishimbo, Godlove Fred Mbwanji, Issakwisa Habakkuk Mwakyula, Davance Mwasomola, Megan M Seddon, Mark A. Shaffer, Stephanie C. Shealy, Anthony Nsojo
Software Mentions: 2
Published: over 4 years ago

10.1098/rsta.2017.0436

UKAEA capabilities to address the challenges on the path to delivering fusion power
Cited by: 13
Author(s): I. T. Chapman, A.W. Morris
Software Mentions: 2
Published: almost 6 years ago

10.1098/rsta.2017.0432

The European roadmap towards fusion electricity
Cited by: 40
Author(s): A. J. H. Donné
Software Mentions: 2
Published: almost 6 years ago

10.1098/rstb.2013.0509

Systematic identification of 3′-UTR regulatory elements in activity-dependent mRNA stability in hippocampal neurons
Cited by: 32
Author(s): Jeffrey K. Cohen, Philip R. Lee, R. Douglas Fields
Software Mentions: 2
Published: about 10 years ago

10.1186/1746-4811-4-17

Identification of a cis-regulatory element by transient analysis of co-ordinately regulated genes
Cited by: 72
Author(s): Andrew P. Dare, Robert J. Schaffer, Kui Lin‐Wang, Andrew C. Allan, Roger P. Hellens
Software Mentions: 2
Published: almost 17 years ago

10.1186/s13007-016-0126-6

ExactSearch: a web-based plant motif search tool
Cited by: 6
Author(s): T.D.C.P. Gunasekara, Avinash Subramanian, Janaki Venkata Ram Kumar Avvari, Bin Li, Chen Su, Hairong Wei
Software Mentions: 2
Published: over 8 years ago

10.1186/s13015-014-0026-0

On the number of genomic pacemakers: a geometric approach
Cited by: 8
Author(s): Sagi Snir
Software Mentions: 2
Published: almost 11 years ago

10.1371/journal.pbio.1001614

A Temperature-Responsive Network Links Cell Shape and Virulence Traits in a Primary Fungal Pathogen
Cited by: 100
Author(s): Sinem Beyhan, Matías Gutiérrez, Mark Voorhies, Anita Sil
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pbio.1000013

Functional Anatomy of Polycomb and Trithorax Chromatin Landscapes in Drosophila Embryos
Cited by: 293
Author(s): Bernd Schuettengruber, Mythily Ganapathi, Benjamin Leblanc, Manuela Portoso, Rami Jaschek, Bas Tolhuis, Maarten van Lohuizen, Amos Tanay, Giacomo Cavalli
Software Mentions: 2
Published: almost 16 years ago

10.1186/1471-2164-11-476

Gill transcriptome response to changes in environmental calcium in the green spotted puffer fish
Cited by: 43
Author(s): Patrícia I. S. Pinto, Hideo Matsumura, Michael A. S. Thorne, Deborah M. Power, Ryohei Terauchi, Richard Reinhardt, Adelino V. M. Canário
Software Mentions: 2
Published: over 14 years ago

10.1371/journal.pcbi.1002785

Universal Pacemaker of Genome Evolution
Cited by: 39
Author(s): Sagi Snir, Yuri I. Wolf, Eugene V. Koonin
Software Mentions: 2
Published: almost 12 years ago

10.1186/1471-2164-11-362

Insights into shell deposition in the Antarctic bivalve Laternula elliptica: gene discovery in the mantle transcriptome using 454 pyrosequencing
Cited by: 162
Author(s): Melody S. Clark, Michael A. S. Thorne, Florbela A. Vieira, João C. R. Cardoso, Deborah M. Power, Lloyd S. Peck
Software Mentions: 2
Published: almost 15 years ago

10.1186/1471-2164-12-385

Comparative analyses imply that the enigmatic sigma factor 54 is a central controller of the bacterial exterior
Cited by: 94
Author(s): Christof Francke, Tom Groot Kormelink, Yanick Hagemeijer, Lex Overmars, Vincent Sluijter, Roy Moezelaar, Roland J. Siezen
Software Mentions: 2
Published: over 13 years ago

10.1371/journal.pcbi.1000832

RNAcontext: A New Method for Learning the Sequence and Structure Binding Preferences of RNA-Binding Proteins
Cited by: 226
Author(s): Hilal Kazan, Debashish Ray, Esther T. Chan, Timothy R. Hughes, Quaid Morris
Software Mentions: 2
Published: over 14 years ago

10.1371/journal.pgen.1003028

Genomic Study of RNA Polymerase II and III SNAPc-Bound Promoters Reveals a Gene Transcribed by Both Enzymes and a Broad Use of Common Activators
Cited by: 62
Author(s): Nicole James Faresse, Donatella Canella, Viviane Praz, Joëlle Michaud, David Romascano, Nouria Hernandez
Software Mentions: 2
Published: about 12 years ago

10.1371/journal.pgen.1003726

Characterization of the p53 Cistrome – DNA Binding Cooperativity Dissects p53's Tumor Suppressor Functions
Cited by: 74
Author(s): Katharina Schlereth, Charlotte Heyl, Anna-Maria Krampitz, Marco Mernberger, Florian Finkernagel, Maren Scharfe, Michael Jarek, Ellen Leich, Andreas Rosenwald, Thorsten Stiewe
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pgen.1000018

Functional Characterization of Variations on Regulatory Motifs
Cited by: 18
Author(s): Michal Lapidot, Orna Mizrahi-Man, Yitzhak Pilpel
Software Mentions: 2
Published: over 16 years ago

10.1371/journal.pgen.1004169

GC-Rich DNA Elements Enable Replication Origin Activity in the Methylotrophic Yeast Pichia pastoris
Cited by: 42
Author(s): Ivan Liachko, Rachel A. Youngblood, Kyle Tsui, Kerry L Bubb, Christine Queitsch, M. K. Raghuraman, Corey Nislow, Bonita J. Brewer, Maitreya J. Dunham
Software Mentions: 2
Published: over 10 years ago