pypi: HTSeq | Projects | Ecosyste.ms: Papers

10.3389/fmicb.2017.00942

The Hybrid Strategy of Thermoactinospora rubra YIM 77501T for Utilizing Cellulose as a Carbon Source at Different Temperatures
Cited by: 7
Author(s): Yi-Rui Yin, Zhen Meng, Qingwen Hu, Jiuran Zhao, Wen-Dong Xian, Linhua Li, Wei Hu, Feng Zhang, En‐Min Zhou, Xiao‐Yang Zhi, Wenjun Li
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2020.616792

Copper Ions Facilitate the Conjugative Transfer of SXT/R391 Integrative and Conjugative Element Across Bacterial Genera
Cited by: 9
Author(s): Zhou Song, Lei Zuo, Cui Li, Yiming Tian, Hongning Wang
Software Mentions: 1
Published: over 4 years ago

10.3389/fmicb.2018.01978

Global Transcriptomic Analysis and Function Identification of Malolactic Enzyme Pathway of Lactobacillus paracasei L9 in Response to Bile Stress
Cited by: 25
Author(s): Xiayin Ma, Guohong Wang, Zhengyuan Zhai, Pengyu Zhou, Yanbin Hao
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2018.02635

Enhanced Expression of Pullulanase in Bacillus subtilis by New Strong Promoters Mined From Transcriptome Data, Both Alone and in Combination
Cited by: 20
Author(s): Fanqiang Meng, Xiaoyu Zhu, Ting Nie, Feng Lü, Xiaomei Bie, Yingjian Lu, Frances Trouth, Zhaoxin Lu
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2019.01905

N4-Cytosine DNA Methylation Is Involved in the Maintenance of Genomic Stability in Deinococcus radiodurans
Cited by: 20
Author(s): Shengjie Li, Jianling Cai, Haijun Lu, Shuyu Mao, Shang Dai, Jing Hu, Liangyan Wang, Xiaoting Hua, Hong Xu, Bing Teng, Ye Zhao, Yuejin Hua
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2018.01319

Isolation of Low-Abundant Bacteroidales in the Human Intestine and the Analysis of Their Differential Utilization Based on Plant-Derived Polysaccharides
Cited by: 13
Author(s): Huizi Tan, Jianxin Zhao, Hao Zhang, Qixiao Zhai
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2021.682205

MgrB Inactivation Confers Trimethoprim Resistance in Escherichia coli
Cited by: 2
Author(s): Hongmei Shi, Ting Li, Jintian Xu, Jifang Yu, Shimei Yang, Xian-En Zhang, Sheng-Ce Tao, Jing Gu, Jiao-Yu Deng
Software Mentions: 1
Published: over 4 years ago

10.7554/eLife.61539

Ral GTPases promote breast cancer metastasis by controlling biogenesis and organ targeting of exosomes
Cited by: 61
Author(s): Shima Ghoroghi, Benjamin Mary, Annabel Larnicol, Nandini Asokan, Albrecht Klein, Naël Osmani, Ignacio Busnelli, François Delalande, Nicodème Paul, Sébastien Halary, Frédéric Gros, Laëtitia Fouillen, Anne‐Marie Haeberlé, Cathy Royer, Coralie Spiegelhalter, Gwennan André-Grégoire, Vincent Mittelheisser, Alexandre Detappe, Kendelle J. Murphy, Paul Timpson, Raphaël Carapito, Marcel Blot‐Chabaud, Julie Gavard, Nicolas Vitale, Olivier Lefèbvre, Jacky G. Goetz, Vincent Hyenne
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmicb.2018.00825

Tachyplesin Causes Membrane Instability That Kills Multidrug-Resistant Bacteria by Inhibiting the 3-Ketoacyl Carrier Protein Reductase FabG
Cited by: 23
Author(s): Cunbao Liu, Jialong Qi, Bin Shu, Yanbing Ma
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2021.672661

pH Changes Have a Profound Effect on Gene Expression, Hydrolytic Enzyme Production, and Dimorphism in Saccharomycopsis fibuligera
Cited by: 1
Author(s): Mohamed El-Agamy Farh, Najib Abdellaoui, Jeong‐Ah Seo
Software Mentions: 1
Published: over 4 years ago

10.3389/fgene.2019.00610

Comparative Transcriptome Analysis Reveals Molecular Basis Underlying Fast Growth of the Selectively Bred Pacific Oyster, Crassostrea gigas
Cited by: 27
Author(s): Fuqiang Zhang, Bing Hu, Huiru Fu, Zexin Jiao, Qi Li, Shikai Liu
Software Mentions: 1
Published: over 6 years ago

10.3389/fgene.2021.607719

Transcriptome Analysis Identifies Candidate Genes and Signaling Pathways Associated With Feed Efficiency in Xiayan Chicken
Cited by: 12
Author(s): Xiao Cong, Jixian Deng, Lei Zeng, Tiantian Sun, Zhuliang Yang, Xiurong Yang
Software Mentions: 1
Published: over 4 years ago

10.3389/fendo.2018.00131

Growth Hormone Overexpression Disrupts Reproductive Status Through Actions on Leptin
Cited by: 29
Author(s): Ji Chen, Mengxi Cao, Aidi Zhang, Minjun Shi, Binbin Tao, Yongming Li, Yaping Wang, Zhu Zhang, Vance L. Trudeau, Wei Hu
Software Mentions: 1
Published: over 7 years ago

10.7554/eLife.27155

IGF2 mRNA binding protein-2 is a tumor promoter that drives cancer proliferation through its client mRNAs IGF2 and HMGA1
Cited by: 73
Author(s): Ning Dai, Fei Ji, Jason Wright, Liliana Minichiello, Ruslan I. Sadreyev, Joseph Avruch
Software Mentions: 1
Published: over 8 years ago

10.3389/fendo.2020.565483

The Effect of FOXC2-AS1 on White Adipocyte Browning and the Possible Regulatory Mechanism
Cited by: 9
Author(s): Yan Wang, Siyu Hua, Xianwei Cui, Yan Cao, Juan Wen, Xia Chi, Lei Pang, Lianghui You
Software Mentions: 1
Published: about 5 years ago

10.3389/fncel.2016.00110

Effects of Pin1 Loss in HdhQ111 Knock-in Mice
Cited by: 12
Author(s): Elena Agostoni, Silvia Michelazzi, Marta Maurutto, Alisia Carnemolla, Yari Ciani, Paolo Vatta, Paola Roncaglia, S. Zucchelli, Giampiero Leanza, Fiamma Mantovani, Stefano Gustincich, Claudio Santoro, Silvano Piazza, Giannino Del Sal, Francesca Persichetti
Software Mentions: 1
Published: over 9 years ago

10.3389/fncel.2015.00063

Transcriptome analyses of adult mouse brain reveal enrichment of lncRNAs in specific brain regions and neuronal populations
Cited by: 71
Author(s): Beena M. Kadakkuzha, Xinan Liu, Jennifer McCrate, Gautam Shankar, Valerio Rizzo, Alina Afinogenova, Brandon Young, Mohammad Fallahi, Anthony C. Carvalloza, Bindu Raveendra, Sathyanarayanan V. Puthanveettil
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.52069

Sequentially induced motor neurons from human fibroblasts facilitate locomotor recovery in a rodent spinal cord injury model
Cited by: 18
Author(s): Hyunah Lee, Hye Yeong Lee, Byeong Eun Lee, Daniela Gerovska, Soo Yong Park, Holm Zaehres, Marcos J. Araúzo-Bravo, Jae‐Ick Kim, Yoon Ha, Hans R. Schöler, Jeong Beom Kim
Software Mentions: 1
Published: over 5 years ago

10.3389/fcimb.2020.00203

Potent Tetrahydroquinolone Eliminates Apicomplexan Parasites
Cited by: 19
Author(s): Martin J. McPhillie, Ying Zhou, Mark Hickman, James A. Gordon, Christopher Weber, Qigui Li, Patricia Lee, K. Amporndanai, Rachel M. Johnson, Heather Darby, Stuart Woods, Zhu Hong Li, Richard S. Priestley, Kurt D. Ristroph, Scott B. Biering, Kamal El Bissati, Seungmin Hwang, Farida Hakim, Sarah Dovgin, Joseph Lykins, Lucy R. Roberts, Kerrie E Hargrave, Hua Cong, Anthony P. Sinai, Stephen P. Muench, J. P. Dubey, Robert Krafft Prud'homme, Hernan Lorenzi, Giancarlo A. Biagini, Silvia N.J. Moreno, Craig W. Roberts, S.V. Antonyuk, Colin W. G. Fishwick, Rima McLeod
Software Mentions: 1
Published: over 5 years ago

10.3389/fcimb.2020.00219

Whole Genome and Transcriptome Sequencing of Two Multi-Drug Resistant Mycobacterium tuberculosis Strains to Facilitate Illustrating Their Virulence in vivo
Cited by: 7
Author(s): Jun Tang, Zhihao Liu, Yanan Shi, Zhan Li, Chuan Qin
Software Mentions: 1
Published: over 5 years ago

10.3389/fcimb.2019.00363

Staphylococcus aureus Small Colony Variants (SCVs): News From a Chronic Prosthetic Joint Infection
Cited by: 57
Author(s): Guilherme Loss, Patrícia Martins Simões, Florent Valour, Marina Farrel Cortês, Luiz Gonzaga, Marine Bergot, Sophie Trouillet‐Assant, Jérôme Josse, Alan Diot, Emiliano P. Ricci, Ana Tereza Ribeiro de Vasconcelos, Frédéric Laurent
Software Mentions: 1
Published: about 6 years ago

10.7554/eLife.01179

Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster
Cited by: 323
Author(s): Joshua G. Dunn, Catherine K. Foo, Nicolette G Belletier, Elizabeth R. Gavis, Jonathan S. Weissman
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0153970

Combined Gene Expression and RNAi Screening to Identify Alkylation Damage Survival Pathways from Fly to Human
Cited by: 8
Author(s): Alfeu Zanotto-Filho, Dashnamoorthy Ravi, Eva Loranc, Luís Henrique Trentin de Souza, José Cláudio Fonseca Moreira, Uthra Suresh, Yidong Chen, Alexander J.R. Bishop
Software Mentions: 1
Published: over 9 years ago

10.3389/fcimb.2020.00428

Legionella pneumophila Infection Rewires the Acanthamoeba castellanii Transcriptome, Highlighting a Class of Sirtuin Genes
Cited by: 12
Author(s): Pengfei Li, Dane Vassiliadis, Sze Ying Ong, Vicki Bennett-Wood, Chihiro Sugimoto, Junya Yamagishi, Elizabeth L. Hartland, Shivani Pasricha
Software Mentions: 1
Published: about 5 years ago

10.3389/fcell.2021.685741

Comprehensive Analysis of Peripheral Exosomal circRNAs in Large Artery Atherosclerotic Stroke
Cited by: 12
Author(s): Qi Xiao, Ruihua Yin, Yuan Wang, Shaonan Yang, Aijun Ma, Xudong Pan, Xiaoyan Zhu
Software Mentions: 1
Published: over 4 years ago

10.3389/fcell.2020.554984

The Bone-Forming Properties of Periosteum-Derived Cells Differ Between Harvest Sites
Cited by: 18
Author(s): Lisanne C. Groeneveldt, Tim Herpelinck, Marina Maréchal, Constantinus Politis, Wilfred F. J. van IJcken, Danny Huylebroeck, Liesbet Geris, Eskeatnaf Mulugeta, Frank P. Luyten
Software Mentions: 1
Published: almost 5 years ago

10.3389/fcvm.2021.627380

Transcriptome and N6-Methyladenosine RNA Methylome Analyses in Aortic Dissection and Normal Human Aorta
Cited by: 11
Author(s): Xianwu Zhou, Zerui Chen, Jianrong Zhou, Yaorong Liu, Ruixin Fan, Tucheng Sun
Software Mentions: 1
Published: over 4 years ago

10.3389/fbioe.2020.00157

Gossypium hirsutum Salt Tolerance Is Enhanced by Overexpression of G. arboreum JAZ1
Cited by: 18
Author(s): Ge Zhao, Yun Song, Qianhua Wang, Dongxia Yao, Dongliang Li, Wenqiang Qin, Xiaoyang Ge, Zuoren Yang, Wenying Xu, Zhen Su, Xueyan Zhang, Fuguang Li, Jiahe Wu
Software Mentions: 1
Published: over 5 years ago

10.3389/fnagi.2020.00256

Transcriptome Analyses in BV2 Microglial Cells Following Treatment With Amino-Terminal Fragments of Apolipoprotein E
Cited by: 9
Author(s): Tanner B Pollock, Giovan N. Cholico, Noail F Isho, Ryan Day, Tarun Suresh, Erica S. Stewart, Madyson M McCarthy, Troy T. Rohn
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-020-72482-w

Coordinated analysis of exon and intron data reveals novel differential gene expression changes
Cited by: 5
Author(s): Hamid R. Eghbalnia, William W. Wilfinger, Karol Mackey, Piotr Chomczyński
Software Mentions: 1
Published: about 5 years ago

10.7554/eLife.17365

Chromosome-wide mechanisms to decouple gene expression from gene dose during sex-chromosome evolution
Cited by: 27
Author(s): B. Wheeler, Erika Anderson, Christian Frøkjær-Jensen, Qian Bian, Erik M. Jørgensen, Barbara J Meyer
Software Mentions: 1
Published: about 9 years ago

10.1186/2045-8118-10-25

Developmental changes in the transcriptome of the rat choroid plexus in relation to neuroprotection
Cited by: 65
Author(s): Ingrid Kratzer, Shane A. Liddelow, NR Saunders, Katarzyna Dziegielewska, Nathalie Strazielle, Jean-François Ghersi-Egea
Software Mentions: 1
Published: over 12 years ago

10.12688/f1000research.8290.2

dbVar structural variant cluster set for data analysis and variant comparison
Cited by: 11
Author(s): Lon Phan, Jeffrey Hsu, Le Quang Minh Tri, Michaela Willi, Tamer Mansour, Yan Kai, John Garner, John Lopez, Ben Busby
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-020-70986-z

Bifidobacterium adolescentis as a key member of the human gut microbiota in the production of GABA
Cited by: 118
Author(s): Sabrina Duranti, Lorena Ruíz, Gabriele Andrea Lugli, Héctor Tames, Christian Milani, Leonardo Mancabelli, Walter Mancino, Giulia Longhi, Luca Carnevali, Andrea Sgoifo, Abelardo Margollés, Marco Ventura, Patricia Ruas‐Madiedo, Francesca Turroni
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-020-69639-y

Identification of the novel bacterial blight resistance gene Xa46(t) by mapping and expression analysis of the rice mutant H120
Cited by: 32
Author(s): Shen Chen, Congying Wang, Yang Jiao, Bing Chen, Wenjuan Wang, Jing Su, Aiqing Feng, Liexian Zeng, Xiaoyuan Zhu
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-67932-4

Transcriptomic analysis of regulatory pathways involved in female reproductive physiology of Rhodnius prolixus under different nutritional states
Cited by: 32
Author(s): Jimena Leyria, Ian Orchard, Angela B. Lange
Software Mentions: 1
Published: over 5 years ago

10.1186/s13227-018-0111-4

A two-level model for the role of complex and young genes in the formation of organism complexity and new insights into the relationship between evolution and development
Cited by: 10
Author(s): Dong Yang, Aotian Xu, Pan Shen, Chao Gao, Jiayin Zang, Chen Qiu, Hongsheng Ouyang, Ying Jiang, Fuchu He
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-020-68484-3

Up-regulation of autophagy by low concentration of salicylic acid delays methyl jasmonate-induced leaf senescence
Cited by: 16
Author(s): Runzhu Yin, Xueyan Liu, Jingfang Yu, Yingbin Ji, Jian Liu, Lixin Cheng, Jun Zhou
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-68185-x

AChR antibodies show a complex interaction with human skeletal muscle cells in a transcriptomic study
Cited by: 4
Author(s): Yu Hong, Kristina Xiao Liang, Nils Erik Gilhus
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-66881-2

New LncRNAs in Chronic Hepatitis C progression: from fibrosis to hepatocellular carcinoma
Cited by: 8
Author(s): Adriana Camargo Ferrasi, Geysson Javier Fernández, Rejane Maria Tommasini Grotto, Giovanni Faria Silva, João Gonçalves, Marina C. Costa, Francisco J. Enguita, Maria Inês de Moura Campos Pardini
Software Mentions: 1
Published: over 5 years ago

10.1155/2018/9194362

The Effects of Radix Astragali Water Abstract on Energy Metabolism in Rat Yang-Deficiency Cold Syndrome Model through PPAR Signaling Pathway
Cited by: 9
Author(s): Wanchen Yu, Haijun Zhao, Xin Zong, Xuming Ji, Xiao Han, Yanfang Wang, Yanan Zhang, Ke Ma, Ning Cui, Shijun Wang
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-020-66656-9

The phospholamban p.(Arg14del) pathogenic variant leads to cardiomyopathy with heart failure and is unresponsive to standard heart failure therapy
Cited by: 33
Author(s): Tim R. Eijgenraam, Bastiaan J. Boukens, Cornelis J. Boogerd, Elisabeth M. Schouten, Cees W. A. van de Kolk, Nienke M Stege, Wouter P. te Rijdt, Edgar T Hoorntje, Paul A. van der Zwaag, Eva van Rooij, J. Peter van Tintelen, Maarten P. van den Berg, Peter van der Meer, Jolanda van der Velden, Herman H W Silljé, Rudolf A. de Boer
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-77541-w

Physiological and molecular correlates of the screwworm fly attraction to wound and animal odors
Cited by: 3
Author(s): Paul V. Hickner, Omprakash Mittapalli, Anjana Subramoniam, Agustin Sagel, Wes Watson, Maxwell J. Scott, Alex P. Arp, Adalberto A Pérez de León, Zainulabeuddin Syed
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-66307-z

N-terminal deletion of Swi3 created by the deletion of a dubious ORF YJL175W mitigates protein burden effect in S. cerevisiae
Cited by: 4
Author(s): Nobuo Saeki, Yuichi Eguchi, Reiko Kintaka, Koji Makanae, Yuichi Shichino, Shigeo Iwasaki, Manabu Kanno, Nobutada Kimura, Hisao Moriya
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-77993-0

Elucidating the regulatory mechanism of Swi1 prion in global transcription and stress responses
Cited by: 5
Author(s): Zhiqiang Du, Jeniece Regan, Elizabeth T. Bartom, Wei Wu, Li Zhang, Dustin K. Goncharoff, Liming Li
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-65699-2

Proteome and transcriptome reveal the involvement of heat shock proteins and antioxidant system in thermotolerance of Clematis florida
Cited by: 12
Author(s): Changhua Jiang, Yuke Bi, MO Jian-bin, Ruyao Zhang, Mingnan Qu, Shucheng Feng, Jemâa Essemine
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-60578-2

Regulation of Proteins in Human Skeletal Muscle: The Role of Transcription
Cited by: 17
Author(s): Pavel A. Makhnovskii, Victor G. Zgoda, Roman O. Bokov, Elena Shagimardanova, Guzel Gazizova, Oleg Gusev, Е. А. Лысенко, Fedor A. Kolpakov, О. Л. Виноградова, Daniil Popov
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-58996-3

A rare subpopulation of melanoma cells with low expression of metastasis suppressor NME1 is highly metastatic in vivo
Cited by: 11
Author(s): Devin E. Snyder, Ying Wang, David M. Kaetzel
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-58106-3

Characterization and potential mechanisms of highly antibiotic tolerant VBNC Escherichia coli induced by low level chlorination
Cited by: 28
Author(s): Chengsong Ye, Huirong Lin, Menglu Zhang, Sheng Chen, Xin Yu
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-57285-y

Chronic IL-1β-induced inflammation regulates epithelial-to-mesenchymal transition memory phenotypes via epigenetic modifications in non-small cell lung cancer
Cited by: 53
Author(s): Rui Li, Stephanie L. Ong, Linh M. Tran, Zhe Jing, Bin Liu, Stacy J. Park, Zi Ling Huang, Tonya C. Walser, Eileen L. Heinrich, Gina Lee, Ramin Salehi‐Rad, William P. Crosson, Paul C. Pagano, Manash K. Paul, Shili Xu, Harvey R. Herschman, Kostyantyn Krysan, Steven M. Dubinett
Software Mentions: 1
Published: almost 6 years ago

10.1186/1756-8935-8-9

Altering cancer transcriptomes using epigenomic inhibitors
Cited by: 28
Author(s): Malaina Gaddis, Diana L. Gerrard, Seth Frietze, Peggy J. Farnham
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-019-56017-6

Growth hormone-mediated reprogramming of macrophage transcriptome and effector functions
Cited by: 17
Author(s): Augusto Schneider, Hillary N. Wood, Sandra Geden, Catherine J. Greene, Robin M. Yates, Michał M. Masternak, Kyle H. Rohde
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-019-55098-7

Co-incidence of RCC-susceptibility polymorphisms with HIF cis-acting sequences supports a pathway tuning model of cancer
Cited by: 9
Author(s): Virginia Schmid, Véronique N. Lafleur, Olivia Lombardi, Ran Li, Rafik Salama, Leandro M. Colli, Hani Choudhry, Stephen J. Chanock, Peter J. Ratcliffe, David R. Mole
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-021-81834-z

Integrative analysis of transcriptomic data for identification of T-cell activation-related mRNA signatures indicative of preterm birth
Cited by: 3
Author(s): Jae Young Yoo, Do Young Hyeon, Yourae Shin, Soo Min Kim, Young Ah You, Da Ye Kim, Daehee Hwang, Young Ju Kim
Software Mentions: 1
Published: almost 5 years ago

10.1210/en.2016-1929

Genome-Wide Identification of Basic Helix–Loop–Helix and NF-1 Motifs Underlying GR Binding Sites in Male Rat Hippocampus
Cited by: 23
Author(s): John R. Pooley, Benjamin P. Flynn, Lars Grøntved, Songjoon Baek, Michael J. Guertin, Yvonne M. Kershaw, Matthew T. Birnie, A. Pellatt, Caroline A Rivers, R. Louis Schiltz, Gordon L. Hager, Stafford L. Lightman, Becky Conway-Campbell
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-019-52513-x

Extracellular vesicles from endothelial progenitor cells prevent steroid-induced osteoporosis by suppressing the ferroptotic pathway in mouse osteoblasts based on bioinformatics evidence
Cited by: 43
Author(s): Jinsen Lu, Jiazhao Yang, Yongshun Zheng, Xiaoyu Chen, Shiyuan Fang
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-019-50072-9

Identification of differentially expressed genes and fusion genes associated with malignant progression of spinal cord gliomas by transcriptome analysis
Cited by: 4
Author(s): Dongkang Liu, Jin Wang, Yi Guo, Zhenxing Sun, Guihuai Wang
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.ppat.1007627

Inflammatory monocytes are detrimental to the host immune response during acute infection with Cryptococcus neoformans
Cited by: 40
Author(s): Lena J. Heung, Tobias M. Hohl
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.ppat.1007440

Neddylation contributes to CD4+ T cell-mediated protective immunity against blood-stage Plasmodium infection
Cited by: 18
Author(s): Qianqian Cheng, Jian Liu, Yujun Pei, Yaolin Zhang, Dawang Zhou, Weiqing Pan, Jiyan Zhang
Software Mentions: 1
Published: almost 7 years ago

10.7554/eLife.62678

Cardiovascular disease risk factors induce mesenchymal features and senescence in mouse cardiac endothelial cells
Cited by: 11
Author(s): Karthik Amudhala Hemanthakumar, Shentong Fang, Andrey Anisimov, Mikko I. Mäyränpää, Eero Mervaala, Riikka Kivelä
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-83662-7

A bladder cancer patient-derived xenograft displays aggressive growth dynamics in vivo and in organoid culture
Cited by: 11
Author(s): Elise Y. Cai, José Manuel Pérez García, Yuzhen Liu, Funda Vakar-López, Sonali Arora, Holly M. Nguyen, Bryce Lakely, Lisha G. Brown, Alicia Yoke Wei Wong, Bruce Montgomery, John K. Lee, Eva Corey, Jonathan L. Wright, Andrew C. Hsieh, Hung‐Ming Lam
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.ppat.1006020

Merkel Cell Polyomavirus Small T Antigen Promotes Pro-Glycolytic Metabolic Perturbations Required for Transformation
Cited by: 57
Author(s): Christian Berrios, Megha Padi, Mark A. Keibler, Donglim Esther Park, Molla Vadim, Jingwei Cheng, Soo Mi Lee, Gregory Stephanopoulos, John Quackenbush, James A. DeCaprio
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.ppat.1005965

A Viral Immunity Chromosome in the Marine Picoeukaryote, Ostreococcus tauri
Cited by: 30
Author(s): Sheree Yau, Hemon Claire, Évelyne Derelle, Hervé Moreau, Gwenaël Piganeau, Nigel Grimsley
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.ppat.1005511

Transcriptome Remodeling in Trypanosoma cruzi and Human Cells during Intracellular Infection
Cited by: 127
Author(s): Yuan Li, Sheena Shah-Simpson, Kwame Okrah, Ashton T. Belew, Jungmin Choi, Kacey L. Caradonna, Prasad K. Padmanabhan, David Ndegwa, Mohamed-Ramzi Temanni, Héctor Corrada Bravo, Najib M. El-Sayed, Barbara A. Burleigh
Software Mentions: 1
Published: over 9 years ago

10.1093/jxb/erx443

Transcript levels of orf288 are associated with the hau cytoplasmic male sterility system and altered nuclear gene expression in Brassica juncea
Cited by: 25
Author(s): Shuangping Heng, Jie Gao, Chao Wei, Fengyi Chen, Xianwen Li, Jing Wen, Bin Yi, Chaozhi Ma, Jinxing Tu, Tingdong Fu, Jinxiong Shen
Software Mentions: 1
Published: almost 8 years ago

10.15252/embr.201845766

<scp>FET</scp> family fusion oncoproteins target the <scp>SWI</scp> / <scp>SNF</scp> chromatin remodeling complex
Cited by: 47
Author(s): Malin Lindén, Christer Thomsen, Pernilla Grundevik, Emma Jonasson, Daniel Andersson, Rikard Runnberg, Soheila Dolatabadi, Christoffer Vannas, Manuel Luna Santamaría, Henrik Fagman, Anders Ståhlberg, Pierre Åman
Software Mentions: 1
Published: over 6 years ago

10.15252/embr.201642540

Loss of Nat4 and its associated histone H4 N‐terminal acetylation mediates calorie restriction‐induced longevity
Cited by: 37
Author(s): Diego Molina‐Serrano, Vassia Schiza, Christis Demosthenous, Emmanouil Stavrou, Jan Oppelt, Dimitris Kyriakou, Wei Liu, Gertrude Zisser, Helmut Bergler, Weiwei Dang, Antonis Kirmizis
Software Mentions: 1
Published: about 9 years ago

10.1080/1061186X.2019.1710157

Liposomal delivery of hydrophobic RAMBAs provides good bioavailability and significant enhancement of retinoic acid signalling in neuroblastoma tumour cells
Cited by: 4
Author(s): Maja Bilip, Shreya Shah, Mayuran Mathiyalakan, Aristides D. Tagalakis, Stephen L. Hart, Ruhina Maeshima, Simon Eaton, Michael Orford, Elsa Irving, Alessia Di Florio, Claire Simons, Andrew W. Stoker
Software Mentions: 1
Published: almost 6 years ago

10.1155/2020/9010314

A Genome-Wide Analysis of Long Noncoding RNAs in Circulating Leukocytes and Their Differential Expression in Type 1 Diabetes Patients
Cited by: 2
Author(s): Yihan Liu, Xiaoming Du, Jia Cui, Changlong Li, Meng Guo, Jing Lv, Xin Liu, Jingtao Dou, Xiaoyan Du, Hongjuan Fang, Zhenwen Chen
Software Mentions: 1
Published: almost 5 years ago

10.1172/JCI125857

C-type lectin receptors Mcl and Mincle control development of multiple sclerosis–like neuroinflammation
Cited by: 25
Author(s): Marie N’diaye, Susanna Brauner, Sevasti Flytzani, Lara Kular, Andreas Warnecke, Milena Z. Adzemovic, Eliane Piket, Jin Hong Min, Will Edwards, Filia Mela, Hoi Ying Choi, Vera Magg, Tojo James, Magdalena Lindén, Holger M. Reichardt, Michael R. Daws, Jack van Horssen, Ingrid Kockum, Robert A. Harris, Tomas Olsson, André Ortlieb Guerreiro-Cacais, Maja Jagodic
Software Mentions: 1
Published: almost 6 years ago

Projects: pypi: HTSeq

Science Score: 65/100

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Papers Mentioning HTSeq 3,071