Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: HESS

https://packages.ecosyste.ms/registries/pypi.org/packages/HESS

HESS black-box algorithm from http://www.peqnp.com
6 versions
Latest release: about 4 years ago
31 downloads last month

Papers Mentioning HESS 17

GWAS of three molecular traits highlights core genes and pathways alongside a highly polygenic background
Cited by: 67
Author(s): Nasa Sinnott-Armstrong, Sahin Naqvi, Manuel A. Rivas, Jonathan K. Pritchard
Software Mentions: 7
Published: almost 4 years ago

10.1186/s13059-021-02397-w

A trans locus causes a ribosomopathy in hypertrophic hearts that affects mRNA translation in a protein length-dependent fashion
Cited by: 4
Author(s): Franziska Witte, Jorge Ruiz-Orera, Camilla Ciolli Mattioli, Susanne Blachut, Eleonora Adami, Jana Felicitas Schulz, Valentin Schneider-Lunitz, Oliver Hummel, Giannino Patone, Michael Mücke, Jan Šilhavý, Matthias Heinig, Leonardo Bottolo, Daniel Sanchı́s, Martin Vingron, Marina Chekulaeva, Michal Pravenec, Norbert Hübner, Sebastiaan van Heesch
Software Mentions: 5
Published: over 3 years ago

10.1038/sdata.2019.30

Assessing data availability and research reproducibility in hydrology and water resources
Cited by: 56
Author(s): James H. Stagge, David E. Rosenberg, Adel M. Abdallah, Hadia Akbar, Nour A. Attallah, R.W. James
Software Mentions: 5
Published: over 5 years ago

10.1007/s00204-017-2067-x

Predicting in vivo effect levels for repeat-dose systemic toxicity using chemical, biological, kinetic and study covariates
Cited by: 11
Author(s): Lisa Truong, Gladys Ouédraogo, Ly Ly Pham, Jacques Clouzeau, Sophie Loisel-Joubert, Delphine Blanchet, Hicham Noçairi, Woodrow Setzer, Richard S. Judson, Christopher M. Grulke, Kamel Mansouri, Matthew T. Martin
Software Mentions: 4
Published: about 7 years ago

10.1016/j.comtox.2021.100175

COSMOS next generation – A public knowledge base leveraging chemical and biological data to support the regulatory assessment of chemicals
Cited by: 13
Author(s): Chihae Yang, Mark T.D. Cronin, Kirk Arvidson, Bruno Bienfait, Steven J. Enoch, Bart Heldreth, Bryan Hobocienski, Kristi Muldoon-Jacobs, Y. Lan, Judith C. Madden, Tomasz Magdziarz, J. Marusczyk, Aleksandra Mostrąg, Mark Nelms, Daniel Neagu, Katarzyna R. Przybylak, James F. Rathman, J. Park, A.N. Richarz, Ann M. Richard, J.V. Ribeiro, Oliver Sacher, Christof H. Schwab, Vessela Vitcheva, Patra Volarath, Andrew Worth
Software Mentions: 4
Published: over 3 years ago

10.1098/rsos.150555

Extragalactic background light measurements and applications
Cited by: 68
Author(s): Asantha Cooray
Software Mentions: 4
Published: over 8 years ago

10.1093/bioinformatics/btz944

PheGWAS: a new dimension to visualize GWAS across multiple phenotypes
Cited by: 10
Author(s): Gittu George, Sushrima Gan, Yu Huang, Philip Appleby, Aditya Nar, Radha Venkatesan, Viswanathan Mohan, Colin N.A. Palmer, Alex S.F. Doney
Software Mentions: 3
Published: almost 5 years ago

10.1016/j.cell.2019.06.036

CAG Repeat Not Polyglutamine Length Determines Timing of Huntington’s Disease Onset
Cited by: 243
Author(s): Jongmin Lee, Kevin Correia, Jacob M. Loupe, Kyung‐Hee Kim, Doug Barker, Eun Pyo Hong, Michael J. Chao, Jeffrey D. Long, Diane Lucente, Jean Paul Vonsattel, Ricardo Mouro Pinto, Kawther Abu Elneel, Eliana Marisa Ramos, Jayalakshmi Srinidhi Mysore, Tammy Gillis, Vanessa C. Wheeler, Marcy E. MacDonald, James F. Gusella, Branduff McAllister, Thomas Massey, Christopher Medway, Timothy Stone, Lynsey S. Hall, Lesley Jones, Peter Holmans, Seung Kwak, Anka G Ehrhardt, Cristina Sampaio, Marc Ciosi, Alastair Maxwell, Afroditi Chatzi, Darren G. Monckton, Michael Orth, G. Bernhard Landwehrmeyer, Jane S. Paulsen, E. Ray Dorsey, Ira Shoulson, Richard H. Myers
Software Mentions: 3
Published: over 5 years ago

10.3389/fcvm.2019.00021

Integrative Genomics Analysis Unravels Tissue-Specific Pathways, Networks, and Key Regulators of Blood Pressure Regulation
Cited by: 12
Author(s): Yuqi Zhao, Montgomery Blencowe, Xingyi Shi, Le Shu, Candace Levian, In Sook Ahn, Stuart K. Kim, Tianxiao Huan, Daniel Levy, Xia Yang
Software Mentions: 2
Published: over 5 years ago

10.3389/fphar.2016.00321

Innovative Strategies to Develop Chemical Categories Using a Combination of Structural and Toxicological Properties
Cited by: 5
Author(s): Monika Batke, Martin Gütlein, Falko Partosch, Ursula Gundert‐Remy, Christoph Helma, Stefan Krämer, Andreas Maunz, Madeleine Seeland, Annette Bitsch
Software Mentions: 1
Published: about 8 years ago

10.3390/ijerph16183317

Individual and Environmental Factors Associated with Proteinuria in Korean Children: A Multilevel Analysis
Cited by: 3
Author(s): Suhee Kim, Ju-Yeon Uhm
Software Mentions: 1
Published: about 5 years ago

10.1186/s12885-016-2238-9

Chronic myeloid leukemia incidence, survival and accessibility of tyrosine kinase inhibitors: a report from population-based Lithuanian haematological disease registry 2000–2013
Cited by: 16
Author(s): Tumas Beinortas, Ilma Tavorienė, Tadas Žvirblis, Rolandas Gerbutavičius, Mindaugas Jurgutis, Laimonas Griškevičius
Software Mentions: 1
Published: over 8 years ago

10.1093/bioinformatics/btv568

MT-HESS: an efficient Bayesian approach for simultaneous association detection in OMICS datasets, with application to eQTL mapping in multiple tissues
Cited by: 31
Author(s): Arie Y. Lewin, H. Saadi, James E. Peters, Aida Moreno‐Moral, James C. Lee, Kenneth G. C. Smith, Enrico Petretto, Leonardo Bottolo, Sylvia Richardson
Software Mentions: 1
Published: about 9 years ago

10.1016/j.biopsych.2019.06.031

Classical Human Leukocyte Antigen Alleles and C4 Haplotypes Are Not Significantly Associated With Depression
Cited by: 23
Author(s): Kylie P. Glanville, Jonathan R. I. Coleman, Ken B. Hanscombe, Jack Euesden, Shing Wan Choi, Kirstin Purves, Gerome Breen, Tracy Air, Till F. M. Andlauer, Bernhard T. Baune, Elisabeth B. Binder, Douglas Blackwood, Dorret I. Boomsma, Henriette Nørmølle Buttenschøn, Lucía Colodro‐Conde, Udo Dannlowski, Neşe Direk, Erin C. Dunn, Andreas J. Forstner, E.J.C. de Geus, Hans J. Grabe, Steven P. Hamilton, Ian Jones, Lisa Jones, James A. Knowles, Zoltán Kutalik, Douglas F. Levinson, Glyn Lewis, Penelope A. Lind, Susanne Lucae, Patrik K. E. Magnusson, Peter McGuffin, Andrew M. McIntosh, Yuri Milaneschi, Ole Mors, Sara Mostafavi, Bertram Müller‐Myhsok, Nancy L. Pedersen, Brenda W.J.H. Penninx, James B. Potash, Martin Preisig, Stephan Ripke, Jianxin Shi, Stanley I. Shyn, Jordan W. Smoller, Fabian Streit, Patrick F. Sullivan, Henning Tiemeier, Rudolf Uher, Sandra Van der Auwera, Myrna M. Weissman, Paul O’Reilly, Cathryn M. Lewis, Naomi R. Wray, Manuel Mattheisen, Maciej Trzaskowski, Enda M. Byrne, Abdel Abdellaoui, Mark Adams, Esben Agerbo, Silviu‐Alin Bacanu, Marie Bækvad‐Hansen, Aartjan Beekman, Tim B. Bigdeli, Julien Bryois, Jonas Bybjerg‐Grauholm, Na Cai, Enrique Castelao, Jane H. Christensen, Toni‐Kim Clarke, Baptiste Couvy‐Duchesne, Nicholas Craddock, Gregory E. Crawford, Gail Davies, Ian J. Deary, Franziska Degenhardt, Eske M. Derks, Conor V. Dolan, Thalia C. Eley, Valentina Escott‐Price, Farnush Farhadi Hassan Kiadeh, Hilary Finucane, Jerome C. Foo, Josef Frank, Héléna A. Gaspar, Michael Gill, Fernando S. Goes, Scott D. Gordon, Jakob Grove, Lynsey S. Hall, Christine Søholm Hansen, Thomas Hansen, Stefan Herms, Ian B. Hickie, Per Hoffmann, Georg Homuth, Carsten Horn, Jouke‐Jan Hottenga, David M. Hougaard, David M. Howard, Rick Jansen, Eric Jorgenson, Isaac S. Kohane, Julia Kraft, Warren W. Kretzschmar, Yihan Li, Donald J. MacIntyre, Dean F. MacKinnon, Robert Maier, Wolfgang Maier, Jonathan Marchini, Hamdi Mbarek, Patrick J. McGrath, Sarah E. Medland, Divya Mehta, Christel M. Middeldorp, Evelin Mihailov, Lili Milani, Francis M. Mondimore, Grant W. Montgomery, Niamh Mullins, Matthias Nauck, Bernard Ng, Michel G. Nivard, Dale R. Nyholt, Högni Óskarsson, Michael John Owen, Jodie N. Painter, Carsten Bøcker Pedersen, Marianne Giørtz Pedersen, Roseann E. Peterson, Erik Pettersson, Wouter J. Peyrot, Giorgio Pistis, Daniëlle Posthuma, Jorge A. Quiróz, Per Qvist, John P. Rice, Brien P. Riley, Margarita Rivera, Saira Saeed Mirza, Robert A. Schoevers, Eva C. Schulte, Lei Shen, Engilbert Sigurðsson, Grant Sinnamon, Johannes H. Smit, Daniel J. Smith, Hreinn Stefánsson, Stacy Steinberg, Jana Strohmaier, Katherine E. Tansey, Henning Teismann, Alexander Teumer, Wesley K. Thompson, Pippa A. Thomson, Thorgeir E. Thorgeirsson, Matthew Traylor, Jens Treutlein, Vassily Trubetskoy, Andrés G. Uitterlinden, Daniel Umbricht, Albert M. van Hemert, Alexander Viktorin, Peter M. Visscher, Yunpeng Wang, Bradley T. Webb, Shantel Weinsheimer, Jürgen Wellmann, Gonneke Willemsen, Stephanie H. Witt, Yang Wu, Hualin Simon Xi, Jian Yang, Futao Zhang, Volker Arolt, Klaus Berger, Sven Cichon, E.J.C. de Geus, J. Raymond DePaulo, Enrico Domenici, Katharina Domschke, Tõnu Esko, Caroline Hayward, Andrew C. Heath, Kenneth S. Kendler, Stefan Kloiber, Qingqin Li, Pamela A. F. Madden, Nicholas G. Martin, Andres Metspalu, Preben Bo Mortensen, Merete Nordentoft, Markus M. Nöthen, Michael O’Donovan, Sara A. Paciga, Roy H. Perlis, David J. Porteous, Marcella Rietschel, Catherine Schaefer, Thomas G. Schulze, Kári Stefánsson, Henry Völzke, Thomas Werge, Cathryn M. Lewis, Anders D. Børglum, Naomi R. Wray
Software Mentions: 1
Published: over 4 years ago

10.1002/gepi.22209

Integrative analysis of Dupuytren's disease identifies novel risk locus and reveals a shared genetic etiology with BMI
Cited by: 8
Author(s): Megan Major, Malika K. Freund, Kathryn S. Burch, Nicholas Mancuso, Michael Ng, Dominic Furniss, Bogdan Paşaniuc, Roel A. Ophoff
Software Mentions: 1
Published: over 5 years ago

10.3389/fped.2019.00499

Genetics and Gene-Environment Interactions in Childhood and Adult Onset Asthma
Cited by: 52
Author(s): Eva Morales, David L. Duffy
Software Mentions: 1
Published: almost 5 years ago

10.3389/fphar.2018.01147

Development of an Infrastructure for the Prediction of Biological Endpoints in Industrial Environments. Lessons Learned at the eTOX Project
Cited by: 10
Author(s): Manuel Pastor, Jordi Quintana, Ferrán Sanz
Software Mentions: 1
Published: about 6 years ago