Ecosyste.ms: Papers

10.1371/journal.pone.0187134

A millennium of north-east Atlantic cod juvenile growth trajectories inferred from archaeological otoliths
Cited by: 15
Author(s): Guðbjörg Ásta Ólafsdóttir, Gróa Pétursdóttir, Hlynur Bárðarson, Ragnar Edvardsson
Software Mentions: 4
Published: about 7 years ago

10.3389/fmicb.2020.607396

Distinct Microbial Communities in Adjacent Rock and Soil Substrates on a High Arctic Polar Desert
Cited by: 16
Author(s): Yong‐Hoe Choe, Min‐Cheol Kim, Yoo Kyung Lee
Software Mentions: 4
Published: almost 4 years ago

10.1186/s12891-020-03705-4

Range of abduction in patients with Legg-Calvé-Perthes disease – a nationwide register-based cohort study
Cited by: 2
Author(s): Ahmad El-Harbiti, Yasmin D. Hailer
Software Mentions: 4
Published: about 4 years ago

10.12688/f1000research.15895.2

NovoGraph: Human genome graph construction from multiple long-read de novo assemblies
Cited by: 5
Author(s): Evan Biederstedt, Jeffrey C. Oliver, Nancy F. Hansen, Aarti Jajoo, Nathan Dunn, Andrew Olson, Ben Busby, Alexander Dilthey
Software Mentions: 4
Published: almost 6 years ago

10.1186/s13071-020-04267-z

Contrasted transmission efficiency of Zika virus strains by mosquito species Aedes aegypti, Aedes albopictus and Culex quinquefasciatus from Reunion Island
Cited by: 11
Author(s): Yann Gomard, Cyrille Lebon, Patrick Mavingui, Célestine M. Atyame
Software Mentions: 4
Published: over 4 years ago

10.1098/rsos.191705

Pathogen avoidance and prey discrimination in ants
Cited by: 14
Author(s): Hugo Pereira, Claire Detrain
Software Mentions: 4
Published: almost 5 years ago

10.1128/mSphere.00271-21

Transmission Potential of Floridian Aedes aegypti Mosquitoes for Dengue Virus Serotype 4: Implications for Estimating Local Dengue Risk
Cited by: 8
Author(s): Caroline J. Stephenson, Heather Coatsworth, Sang‐Wook Kang, John A. Lednicky, Rhoel R. Dinglasan
Software Mentions: 4
Published: about 3 years ago

10.3390/s17081891

Influence of the Distribution of Tag IDs on RFID Memoryless Anti-Collision Protocols
Cited by: 6
Author(s): Nikola Cmiljanic, Hugo Landaluce, Asier Perallos, Laura Arjona
Software Mentions: 4
Published: over 7 years ago

10.3390/microorganisms9091847

Impact of Maternal Intrapartum Antibiotics, and Caesarean Section with and without Labour on Bifidobacterium and Other Infant Gut Microbiota
Cited by: 15
Author(s): Yuan Yao Chen, Xin Zhao, Wolfgang Moeder, Hein Min Tun, Elinor Simons, Piushkumar J. Mandhane, Theo J. Moraes, Stuart E. Turvey, Padmaja Subbarao, James A. Scott, Anita L. Kozyrskyj
Software Mentions: 3
Published: about 3 years ago

10.1371/journal.pgen.1002602

The Atypical Calpains: Evolutionary Analyses and Roles in Caenorhabditis elegans Cellular Degeneration
Cited by: 24
Author(s): Peter Joyce, Rahul Satija, Maozi C Chen, Patricia E. Kuwabara
Software Mentions: 3
Published: over 12 years ago

10.1371/journal.pone.0034572

Accurate Reconstruction of Insertion-Deletion Histories by Statistical Phylogenetics
Cited by: 29
Author(s): Oscar Westesson, Gerton Lunter, Benedict Paten, Ian Holmes
Software Mentions: 3
Published: over 12 years ago

10.1371/journal.pone.0070396

Functional Divergence and Convergent Evolution in the Plastid-Targeted Glyceraldehyde-3-Phosphate Dehydrogenases of Diverse Eukaryotic Algae
Cited by: 8
Author(s): Daniel Gaston, Andrew J. Roger
Software Mentions: 3
Published: over 11 years ago

10.1002/1878-0261.12571

Identification of microRNAs involved in pathways which characterize the expression subtypes of NSCLC
Cited by: 11
Author(s): Ann Rita Halvorsen, Miriam Ragle Aure, Åsa Kristina Öjlert, Odd Terje Brustugun, Steinar Solberg, Daniel J. H. Nebdal, Åslaug Helland
Software Mentions: 3
Published: about 5 years ago

10.7717/peerj.6914

Conspecific coprophagy stimulates normal development in a germ-free model invertebrate
Cited by: 26
Author(s): Benjamin C. Jahnes, Madeline Herrmann, Zakee L. Sabree
Software Mentions: 3
Published: over 5 years ago

10.1371/journal.pone.0230008

Biomass and carbon estimation for scrub mangrove forests and examination of their allometric associated uncertainties
Cited by: 14
Author(s): Paulo César Costa Virgulino-Júnior, Diego Novaes Carneiro, Wilson R. Nascimento, Michele Ferreira Cougo, Marcus Emanuel Barroncas Fernandes
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0071591

Demographic Variation between Colour Patterns in a Temperate Protogynous Hermaphrodite, the Ballan Wrasse Labrus bergylta
Cited by: 20
Author(s): David Villegas‐Ríos, Alexandre Alonso‐Fernández, Mariña Fabeiro, Rafael Bañón, Fran Saborido-Rey
Software Mentions: 3
Published: about 11 years ago

10.1371/journal.pone.0203537

Age determination for whitespotted conger Conger myriaster through somatic and otolith morphometrics
Cited by: 4
Author(s): Xidong Mu, Chongliang Zhang, Binduo Xu, Ying Xue, Yiping Ren
Software Mentions: 3
Published: about 6 years ago

10.1186/1754-6834-7-18

Close relationship of a novel Flavobacteriaceaeα-amylase with archaeal α-amylases and good potentials for industrial applications
Cited by: 28
Author(s): Chunfang Li, Miaofen Du, Bin Cheng, Lushan Wang, Xinqiang Liu, Cuiqing Ma, Chunyu Yang, Ping Xu
Software Mentions: 3
Published: almost 11 years ago

10.3390/cancers13081985

Evaluation of PSA and PSA Density in a Multiparametric Magnetic Resonance Imaging-Directed Diagnostic Pathway for Suspected Prostate Cancer: The INNOVATE Trial
Cited by: 11
Author(s): Hayley Pye, Saurabh Singh, Joseph M. Norris, Lina María Carmona Echeverría, Vasilis Stavrinides, Alistair Grey, Eoin Dinneen, Elly Pilavachi, Joey Clemente, Susan Heavey, Urszula Stopka‐Farooqui, Benjamin S. Simpson, Elisenda Bonet-Carné, Dominic Patel, Paul Barker, Keith Burling, Nicola Stevens, Tony Ng, Eleftheria Panagiotaki, David J. Hawkes, Daniel C. Alexander, Manuel Rodriguez–Justo, Alex Freeman, Alex Kirkham, David Atkinson, Clare Allen, Greg Shaw, Teresita Beeston, Mrishta Brizmohun Appayya, Arash Latifoltojar, Edward Johnston, Mark Emberton, Caroline M. Moore, Hashim U. Ahmed, Shonit Punwani, Hayley C. Whitaker
Software Mentions: 3
Published: over 3 years ago

10.1155/2017/6573623

A Novel Strategy for Minimum Attribute Reduction Based on Rough Set Theory and Fish Swarm Algorithm
Cited by: 5
Author(s): SU Yue-bin, Jun Guo
Software Mentions: 3
Published: over 7 years ago

10.3390/ijms221910574

miR-29a-3p/THBS2 Axis Regulates PAH-Induced Cardiac Fibrosis
Cited by: 10
Author(s): Chao Kai Hsu, I-Fan Liu, Hsuan-Fu Kuo, Chia-Yang Li, Wei Lian, Chia Yuan Chang, Yung‐Hsiang Chen, Wei-Lun Liu, Chi‐Yu Lu, Yuru Liu, Tzu-Chieh Lin, Tsung-Ying Lee, Chi-Yuan Huang, Chong‐Chao Hsieh, Po-Len Liu
Software Mentions: 3
Published: about 3 years ago

10.3390/diagnostics11071131

Clinical Validation of Novel Chip-Based Digital PCR Platform for Fetal Aneuploidies Screening
Cited by: 4
Author(s): Anna Nykel, Rafał Woźniak, Agnieszka Gach
Software Mentions: 3
Published: over 3 years ago

10.1155/2018/2976014

The Effect of Gentle Handling on Depressive-Like Behavior in Adult Male Mice: Considerations for Human and Rodent Interactions in the Laboratory
Cited by: 25
Author(s): Caroline L.C. Neely, Christina Lane, Julio Rodríguez Torres, Jane M. Flinn
Software Mentions: 3
Published: almost 7 years ago

10.1111/eva.12199

Does human‐induced hybridization have long‐term genetic effects? Empirical testing with domesticated, wild and hybridized fish populations
Cited by: 28
Author(s): Andrew B. Harbicht, Chris C. Wilson, Dylan J. Fraser
Software Mentions: 3
Published: about 10 years ago

10.1093/femsec/fix117

Assessing effects of the entomopathogenic fungus Metarhizium brunneum on soil microbial communities in Agriotes spp. biological pest control
Cited by: 25
Author(s): Johanna Mayerhofer, Sonja Eckard, Martin Hartmann, Giselher Grabenweger, Franco Widmer, Adrian Leuchtmann, Jürg Enkerli
Software Mentions: 3
Published: about 7 years ago

10.3389/fnbeh.2021.643693

Mosquito Host Seeking in 3D Using a Versatile Climate-Controlled Wind Tunnel System
Cited by: 5
Author(s): Annika Hinze, Jörgen Lantz, Sharon R. Hill, Rickard Ignell
Software Mentions: 3
Published: over 3 years ago

10.1186/s12881-018-0719-1

Genetic associations in community context: a mixed model approach identifies a functional variant in the RBP4 gene associated with HDL-C dyslipidemia
Cited by: 2
Author(s): Erfan Aref‐Eshghi, Oliver Hurley, Guang Sun, Alvin Simms, Marshall Godwin, Pauline Duke, Mehdee Araee, Masoud Mahdavian, Shabnam Asghari
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2020.609033

Creation of an Online Platform for Identification of Microorganisms: Peak Picking or Full-Spectrum Analysis
Cited by: 3
Author(s): К. В. Старостин, Е. А. Демидов, Nikita I. Ershov, A. V. Bryanskaya, В. М. Ефимов, Valeriya N Shlyakhtun, S. E. Peltek
Software Mentions: 3
Published: almost 4 years ago

10.3389/fphys.2018.00272

Strongyle Infection and Gut Microbiota: Profiling of Resistant and Susceptible Horses Over a Grazing Season
Cited by: 45
Author(s): Allison Clark, Guillaume Sallé, Valentine Ballan, Fabrice Reigner, Annabelle Troegeler‐Meynadier, Jacques Cortet, Christine Koch, Mickaël Riou, Alexandra Blanchard, Núria Mach
Software Mentions: 3
Published: over 6 years ago

10.1186/1471-2164-13-373

Comparative analysis of the Oenococcus oeni pan genome reveals genetic diversity in industrially-relevant pathways
Cited by: 80
Author(s): Anthony R. Borneman, Jane McCarthy, Paul J. Chambers, Eveline Bartowsky
Software Mentions: 3
Published: almost 13 years ago

10.1093/gbe/evt195

Being Aquifex aeolicus: Untangling a Hyperthermophile’s Checkered Past
Cited by: 21
Author(s): Robert Eveleigh, Conor J. Meehan, John M. Archibald, Robert G. Beiko
Software Mentions: 3
Published: almost 11 years ago

10.1186/1471-2148-10-360

Assembling networks of microbial genomes using linear programming
Cited by: 6
Author(s): Catherine Holloway, Robert G. Beiko
Software Mentions: 3
Published: almost 15 years ago

10.3390/insects11120877

Preliminary Evaluation of a Granite Rock Dust Product for Pest Herbivore Management in Field Conditions
Cited by: 4
Author(s): Nicoletta Faraone, N. Kirk Hillier
Software Mentions: 3
Published: almost 4 years ago

10.1186/s13002-018-0219-6

Traditional ecological knowledge-based assessment of threatened woody species and their potential substitutes in the Atakora mountain chain, a threatened hotspot of biodiversity in Northwestern Benin, West Africa
Cited by: 16
Author(s): Pierre Agbani, Konoutan Médard Kafoutchoni, Kolawolé Valère Salako, Rodrigue Castro Gbèdomon, Ahuéfa Mauricel Kégbé, Karen Hahn, Brice Sinsin
Software Mentions: 3
Published: over 6 years ago

10.1186/s13002-018-0267-y

Species richness, cultural importance, and prioritization of wild spices for conservation in the Sudano-Guinean zone of Benin (West Africa)
Cited by: 8
Author(s): Konoutan Médard Kafoutchoni, Rodrigue Idohou, Anthony Egeru, Kolawolé Valère Salako, Clément Agbangla, Aristide Cossi Adomou, Achille Ephrem Assogbadjo
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.ppat.1008620

Campylobacter jejuni motility integrates specialized cell shape, flagellar filament, and motor, to coordinate action of its opposed flagella
Cited by: 33
Author(s): Eli J Cohen, Daisuke Nakane, Yoshiki Kabata, David R. Hendrixson, Takayuki Nishizaka, Morgan Beeby
Software Mentions: 3
Published: over 4 years ago

10.1186/1471-2105-12-144

Meta-Alignment with Crumble and Prune: Partitioning very large alignment problems for performance and parallelization
Cited by: 5
Author(s): Krishna M. Roskin, Benedict Paten, David Haussler
Software Mentions: 3
Published: over 13 years ago

10.1186/1471-2105-11-464

Sigma-2: Multiple sequence alignment of non-coding DNA via an evolutionary model
Cited by: 3
Author(s): Gayathri Jayaraman, Rahul Siddharthan
Software Mentions: 3
Published: about 14 years ago

10.1038/s41598-019-53946-0

Volatile DMNT systemically induces jasmonate-independent direct anti-herbivore defense in leaves of sweet potato (Ipomoea batatas) plants
Cited by: 38
Author(s): Anja K. Meents, Shi‐Peng Chen, Michael Reichelt, Hong-Yang Lu, Stefan Bartram, Kai‐Wun Yeh, Axel Mithöfer
Software Mentions: 3
Published: almost 5 years ago

10.1038/s41598-020-66005-w

A practical assessment of nano-phosphate on soybean (Glycine max) growth and microbiome establishment
Cited by: 14
Author(s): Michelle M. McKnight, Zhi Qu, John W. Copeland, David S. Guttman, Virginia K. Walker
Software Mentions: 3
Published: over 4 years ago

10.1186/s13075-021-02594-9

Trabecular bone texture analysis of conventional radiographs in the assessment of knee osteoarthritis: review and viewpoint
Cited by: 9
Author(s): Ahmad Almhdie-Imjabbar, Paweł Podsiadło, Richard Ljuhar, Rachid Jennane, Khac Lan Nguyen, Hechmi Toumi, Simo Saarakkala, Éric Lespessailles
Software Mentions: 3
Published: over 3 years ago

10.1038/s41598-021-95927-2

An approach to assess stress in response to drive hunts using cortisol levels of wild boar (Sus scrofa)
Cited by: 2
Author(s): Justine Güldenpfennig, Marion Schmicke, Martina Hoedemaker, Ursula Siebert, Oliver Keuling
Software Mentions: 3
Published: over 3 years ago

10.3390/s20216196

Devising a Distributed Co-Simulator for a Multi-UAV Network
Cited by: 6
Author(s): Seong Joon Park, Woong Gyu La, Woonghee Lee, Hwangnam Kim
Software Mentions: 3
Published: about 4 years ago

10.3390/toxins13030188

Natural Co-Occurrence of Multiple Mycotoxins in Unprocessed Oats Grown in Ireland with Various Production Systems
Cited by: 17
Author(s): Lorenzo De Colli, Karl De Ruyck, Mohamed F. Abdallah, John Finnan, Ewen Mullins, Steven Kildea, John Spink, Chris Elliott, Martin Danaher
Software Mentions: 3
Published: over 3 years ago

10.1111/tbed.13346

Identifying emerging trends in antimicrobial resistance using <i>Salmonella</i> surveillance data in poultry in Spain
Cited by: 11
Author(s): Julio Álvarez, Gemma Muñoz-Alonso López, Petra Muellner, Cristina de Frutos, Christina A. Ahlstrom, Tania Serrano, Miguel A. Moreno, Maycol Stiven Lopez Duran, José Luis Sáez, Lucas Domı́nguez, María Ugarte‐Ruiz
Software Mentions: 3
Published: about 5 years ago

10.3390/ani10060963

Characterization of Endolysin LyJH307 with Antimicrobial Activity against Streptococcus bovis
Cited by: 8
Author(s): Hanbeen Kim, Hyo Gun Lee, Inhyuk Kwon, Jakyeom Seo
Software Mentions: 3
Published: over 4 years ago

10.3390/ani11020351

Characteristics of Cowsheds in Vietnamese Smallholder Dairy Farms and Their Associations with Microclimate—A Preliminary Study
Cited by: 11
Author(s): Nguyen N. Bang, J. B. Gaughan, Ben J. Hayes, Russell E. Lyons, Nguyen V. Chanh, Nguyễn Xuân Trạch, Duong Nguyen Khang, David McNeill
Software Mentions: 3
Published: almost 4 years ago

10.7554/eLife.29820

Epidemiological and ecological determinants of Zika virus transmission in an urban setting
Cited by: 76
Author(s): José Lourenço, Maricélia Maia de Lima, Nuno Rodrigues Faria, Andrew Walker, Moritz U. G. Kraemer, Christian Julián Villabona-Arenas, Ben Lambert, Erenilde Marques de Cerqueira, Oliver G. Pybus, Luíz Carlos Júnior Alcântara, Mario Recker
Software Mentions: 3
Published: about 7 years ago

10.7717/peerj.9982

Development of a noninvasive photograph-based method for the evaluation of body condition in free-ranging brown bears
Cited by: 11
Author(s): Yuri Shirane, Fumihiko Mori, Masami Yamanaka, Masanao Nakanishi, Tsuyoshi Ishinazaka, Tsutomu Mano, Mina Jimbo, Mariko Sashika, Toshio Tsubota, Michito Shimozuru
Software Mentions: 3
Published: about 4 years ago

10.7717/peerj.5729

Nutritional value of several commercially important river fish species from the Czech Republic
Cited by: 17
Author(s): Sarvenaz Khalili Tilami, Sabine Sampels, Tomáš Zajíc, Jakub Krejsa, Jan Másílko, Jan Mráz
Software Mentions: 3
Published: about 6 years ago

10.7717/peerj.11678

Age, size and body condition do not equally reflect population response to habitat change in the common spadefoot toad <i>Pelobates fuscus</i>
Cited by: 5
Author(s): Dan Cogălniceanu, Florina Stǎnescu, Diana Székely, Sebastian Topliceanu, Ruben Iosif, Paul Székely
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pbio.1000550

Co-Evolution of Transcriptional Silencing Proteins and the DNA Elements Specifying Their Assembly
Cited by: 38
Author(s): Oliver A. Zill, Devin R. Scannell, Lenny Teytelman, Jasper Rine
Software Mentions: 3
Published: almost 14 years ago

10.3390/healthcare9020183

The Effect of Virtual Reality Exercise Program on Sitting Balance Ability of Spinal Cord Injury Patients
Cited by: 5
Author(s): Min-Jae Lee, Sun Min Lee
Software Mentions: 2
Published: almost 4 years ago

10.3390/insects10010002

Annual Abundance and Population Structure of Two Dung Beetle Species in a Human-Modified Landscape
Cited by: 11
Author(s): Julliana Barretto, Carlos A. Cultid‐Medina, Federico Escobar
Software Mentions: 2
Published: almost 6 years ago

10.1093/molbev/msy055

Alignment Modulates Ancestral Sequence Reconstruction Accuracy
Cited by: 58
Author(s): Ricardo Assunção Vialle, Asif U. Tamuri, Nick Goldman
Software Mentions: 2
Published: over 6 years ago

10.3390/nu7085325

Objective Understanding of Front-of-Package Nutrition Labels among Nutritionally At-Risk Individuals
Cited by: 80
Author(s): Pauline Ducrot, Caroline Méjean, Chantal Julia, Emmanuelle Kesse‐Guyot, Mathilde Touvier, Léopold Fezeu, Serge Herçberg, Sandrine Péneau
Software Mentions: 2
Published: about 9 years ago

10.1120/jacmp.v12i3.3535

Feasibility study of performing IGRT system daily QA using a commercial QA device
Cited by: 15
Author(s): J Peng, Darren Kahler, Jonathan G. Li, Robert J. Amdur, K Vanek, Chihray Liu
Software Mentions: 2
Published: over 13 years ago

10.1074/jbc.RA118.001839

The anaplerotic node is essential for the intracellular survival of Mycobacterium tuberculosis
Cited by: 33
Author(s): Piyali Basu, Noor Sandhu, Apoorva Bhatt, Ajit Singh, Ricardo Balhana, Irene Gobe, Nicola A. Crowhurst, Tom A. Mendum, Liang Gao, Jane L. Ward, Michael H. Beale, Johnjoe McFadden, Dany J. V. Beste
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0031493

Distribution, Population Biology, and Trophic Ecology of the Deepwater Demersal Fish Halosauropsis macrochir (Pisces: Halosauridae) on the Mid-Atlantic Ridge
Cited by: 5
Author(s): Odd Aksel Bergstad, L. William Clark, Hege Øverbø Hansen, Nicola J. Cousins
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0231860

Influence of back support shape in wheelchairs offering pelvic support on asymmetrical sitting posture and pressure points during reaching tasks in stroke patients
Cited by: 4
Author(s): Atsuki Ukita, Masayuki Abe, Hirotoshi Kishigami, Tatsuo Hatta
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0193426

Coral reef fishes exhibit beneficial phenotypes inside marine protected areas
Cited by: 8
Author(s): Robert Y. Fidler, Jessica Carroll, Kristen W. Rynerson, Danielle F. Matthews, Ralph G. Turingan
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pgen.1005839

Repeat-Associated Fission Yeast-Like Regional Centromeres in the Ascomycetous Budding Yeast Candida tropicalis
Cited by: 53
Author(s): Gautam Chatterjee, Sundar Ram Sankaranarayanan, Krishnendu Guin, Yogitha Thattikota, Sreedevi Padmanabhan, Rahul Siddharthan, Kaustuv Sanyal
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.pone.0175087

Validation of automatic measurement of QT interval variability
Cited by: 3
Author(s): Peter R. Rijnbeek, Marten E. van den Berg, Gerard van Herpen, Henk J. Ritsema van Eck, Jan A. Kors
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.ppat.1003496

Evolutionary Toggling of Vpx/Vpr Specificity Results in Divergent Recognition of the Restriction Factor SAMHD1
Cited by: 87
Author(s): Oliver I. Fregoso, Jin-Woo Ahn, Chuanping Wang, Jennifer Mehrens, Jacek Skowroński, Michael Emerman
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.ppat.1005149

The Role of the Antiviral APOBEC3 Gene Family in Protecting Chimpanzees against Lentiviruses from Monkeys
Cited by: 38
Author(s): Lucie Etienne, Frédéric Bibollet-Ruche, Peter H. Sudmant, Lily I. Wu, Beatrice H. Hahn, Michael Emerman
Software Mentions: 2
Published: about 9 years ago

10.3390/ijerph16071272

Identifying Participants Who Would Benefit the Most from an Adult Food-literacy Program
Cited by: 14
Author(s): Andrea Begley, Ellen Paynter, Lucy M. Butcher, Vanessa Bobongie, Satvinder S. Dhaliwal
Software Mentions: 2
Published: over 5 years ago

10.1186/s12937-015-0090-4

Discriminating nutritional quality of foods using the 5-Color nutrition label in the French food market: consistency with nutritional recommendations
Cited by: 44
Author(s): Chantal Julia, Pauline Ducrot, Sandrine Péneau, Valérie Deschamps, Caroline Méjean, Léopold Fezeu, Mathilde Touvier, Serge Herçberg, Emmanuelle Kesse‐Guyot
Software Mentions: 2
Published: about 9 years ago

10.1098/rsos.160197

Prevalence rates of health and welfare conditions in broiler chickens change with weather in a temperate climate
Cited by: 17
Author(s): Chérie Part, Phil Edwards, Shakoor Hajat, Lisa Collins
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0175932

Water abstraction affects abundance, size-structure and growth of two threatened cyprinid fishes
Cited by: 9
Author(s): Roberto Merciai, Molons-Sierra Carlota, Sergi Sabater, Emili García‐Berthou
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0069532

Evidence for a Hydrogenosomal-Type Anaerobic ATP Generation Pathway in Acanthamoeba castellanii
Cited by: 34
Author(s): Michelle M. Leger, Ryan M.R. Gawryluk, Michael W. Gray, Andrew J. Roger
Software Mentions: 2
Published: about 11 years ago

10.1186/1471-2105-7-392

GeneLibrarian: an effective gene-information summarization and visualization system
Cited by: 18
Author(s): Jung-Hsien Chiang, Jyh Wei Shin, Heng Hui Liu, Chong Liang Chin
Software Mentions: 2
Published: about 18 years ago

10.1371/journal.pone.0011147

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
Cited by: 3,176
Author(s): Aaron E. Darling, Bob Mau, Nicole T. Perna
Software Mentions: 2
Published: over 14 years ago

10.3390/ijerph18052640

Comparison of Interface Pressures and Subjective Comfort of Pressure-Relieving Overlays on the Operating Table for Healthy Volunteers
Cited by: 1
Author(s): Min Young Han, Sangjin Ko
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0200906

A protocol for urine collection and storage prior to DNA methylation analysis
Cited by: 37
Author(s): Judith Bosschieter, Sander Bach, Irene V. Bijnsdorp, Loes Segerink, W.F. Rurup, Annina P. van Splunter, Idris Bahce, Putri W. Novianti, Geert Kazemier, R. Jeroen A. van Moorselaar, Renske D.M. Steenbergen, Jakko A. Nieuwenhuijzen
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-017-18085-4

Functional and cooperative stabilization of a two-metal (Ca, Zn) center in α-amylase derived from Flavobacteriaceae species
Cited by: 14
Author(s): Haidi Yin, Yang Zhou, Xinyu Nie, Shannan Li, Xuyang Sun, Chao Gao, Zenghang Wang, Guangming Zhou, Ping Xu, Chunyu Yang
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-018-22700-3

Quantum man-in-the-middle attack on the calibration process of quantum key distribution
Cited by: 21
Author(s): Yangyang Fei, Xiangjian Meng, Ming Gao, Hong Wang, Zhi Ma
Software Mentions: 2
Published: over 6 years ago

10.1186/1471-2105-7-527

Logarithmic gap costs decrease alignment accuracy
Cited by: 25
Author(s): Reed A. Cartwright
Software Mentions: 2
Published: almost 18 years ago

10.1371/journal.pone.0183849

EWET: Data collection and interface for the genetic analysis of Echinococcus multilocularis based on EmsB microsatellite
Cited by: 15
Author(s): Jenny Knapp, Sylvie Damy, Jonathan Brillaud, Jean‐Daniel Tissot, Jérémy Navion, Raphael Mélior, Eve Afonso, Vanessa Hormaz, Bruno Gottstein, Gérald Umhang, Adriano Casulli, Frédéric Dadeau, Laurence Millon, Francis Raoul
Software Mentions: 2
Published: about 7 years ago

10.1194/jlr.D120000880

Unlabeled lysophosphatidic acid receptor binding in free solution as determined by a compensated interferometric reader
Cited by: 8
Author(s): Manisha Ray, Katsuhiko Nagai, Yasuyuki Kihara, Amanda Kussrow, Michael N. Kammer, Aaron Frantz, Darryl J. Bornhop, Jerold Chun
Software Mentions: 2
Published: over 4 years ago

10.1186/1471-2105-11-570

Reticular alignment: A progressive corner-cutting method for multiple sequence alignment
Cited by: 17
Author(s): Adrienn Szabó, Adam M. Novak, István Miklós, Jotun Hein
Software Mentions: 2
Published: almost 14 years ago

10.1371/journal.pone.0140898

Effectiveness of Front-Of-Pack Nutrition Labels in French Adults: Results from the NutriNet-Santé Cohort Study
Cited by: 82
Author(s): Pauline Ducrot, Caroline Méjean, Chantal Julia, Emmanuelle Kesse‐Guyot, Mathilde Touvier, Léopold Fezeu, Serge Herçberg, Sandrine Péneau
Software Mentions: 2
Published: about 9 years ago

10.1038/s41598-020-62700-w

Metal concentrations and biological effects from one of the largest mining disasters in the world (Brumadinho, Minas Gerais, Brazil)
Cited by: 72
Author(s): Cristiane dos Santos Vergílio, Diego Lacerda, Bráulio Cherene Vaz de Oliveira, Échily Sartori, Gabriela Munis Campos, Anna Luiza de Souza Pereira, Diego Borges de Aguiar, Tatiana da Silva Souza, Marcelo Gomes de Almeida, Fabiano L. Thompson, Carlos Eduardo de Rezende
Software Mentions: 2
Published: over 4 years ago

10.7717/peerj.7747

Characterizing gene tree conflict in plastome-inferred phylogenies
Cited by: 86
Author(s): Joseph F. Walker, Nathanael Walker-Hale, Oscar M. Vargas, Drew A. Larson, Gregory W. Stull
Software Mentions: 2
Published: about 5 years ago

10.1186/1471-2105-12-472

MSACompro: protein multiple sequence alignment using predicted secondary structure, solvent accessibility, and residue-residue contacts
Cited by: 24
Author(s): Xin Deng, Jianlin Cheng
Software Mentions: 2
Published: almost 13 years ago

10.3390/nu10121986

Serum Nutrient Levels and Aging Effects on Periodontitis
Cited by: 29
Author(s): Jeffrey L. Ebersole, Joshua Lambert, Heather Bush, Pinar Emecen Huja, Arpita Basu
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0219344

A novel RFID multi-tag anti-collision protocol for dynamic vehicle identification
Cited by: 3
Author(s): Zhijian Qu, Xubing Sun, Xinqiang Chen, Shengao Yuan
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-79718-9

Microbiota analysis and transient elastography reveal new extra-hepatic components of liver steatosis and fibrosis in obese patients
Cited by: 25
Author(s): Nicolas Lanthier, Julie Rodriguez, Maxime Nachit, Sophie Hiel, Pierre Tréfois, Audrey M. Neyrinck, Patrice D. Cani, Laure B. Bindels, Jean‐Paul Thissen, Nathalie M. Delzenne
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0153116

Effects of Including Misidentified Sharks in Life History Analyses: A Case Study on the Grey Reef Shark Carcharhinus amblyrhynchos from Papua New Guinea
Cited by: 24
Author(s): J. J. C. Smart, Andrew Chin, Leontine Baje, Madeline E. Green, Sharon A. Appleyard, Andrew J. Tobin, Colin A. Simpfendorfer, William T. White
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0022594

MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons
Cited by: 506
Author(s): Vincent Ranwez, Sébastien Harispe, Frédéric Delsuc, Emmanuel J. P. Douzery
Software Mentions: 2
Published: about 13 years ago

10.1371/journal.pone.0162576

Differences in Biofilm Mass, Expression of Biofilm-Associated Genes, and Resistance to Desiccation between Epidemic and Sporadic Clones of Carbapenem-Resistant Acinetobacter baumannii Sequence Type 191
Cited by: 33
Author(s): Gati Noble Selasi, Nicholas Asiimwe, Hyejin Jeon, Seok Hyeon Na, Hyo Il Kwon, Yoo Jeong Kim, Sang Taek Heo, Man Hwan Oh, Je Chul Lee
Software Mentions: 2
Published: about 8 years ago

10.3390/nu11040797

Effectiveness of an Adult Food Literacy Program
Cited by: 31
Author(s): Andrea Begley, Ellen Paynter, Lucy M. Butcher, Satvinder S. Dhaliwal
Software Mentions: 2
Published: over 5 years ago

10.7554/eLife.00013

A bacterial sulfonolipid triggers multicellular development in the closest living relatives of animals
Cited by: 209
Author(s): Rosanna A. Alegado, Laura W Brown, Shugeng Cao, Renee K Dermenjian, Richard Zuzow, Stephen R. Fairclough, Jon Clardy, Nicole King
Software Mentions: 2
Published: about 12 years ago

10.3390/s140813416

Experimental Energy Consumption of Frame Slotted ALOHA and Distributed Queuing for Data Collection Scenarios
Cited by: 3
Author(s): Pere Tuset-Peiró, Francisco Vázquez-Gallego, Jesús Alonso-Zárate, Luis Alonso, Xavier Vilajosana
Software Mentions: 2
Published: over 10 years ago

10.3390/s150203911

Modeling and Analysis of Reservation Frame Slotted-ALOHA in Wireless Machine-to-Machine Area Networks for Data Collection
Cited by: 7
Author(s): Francisco Vázquez-Gallego, Luis Alonso, Jesús Alonso-Zárate
Software Mentions: 2
Published: almost 10 years ago

10.3390/s16101592

The Design and Analysis of Split Row-Column Addressing Array for 2-D Transducer
Cited by: 2
Author(s): Xu Li, Yanping Jia, Mingyue Ding, Ming Yuchi
Software Mentions: 2
Published: about 8 years ago

10.1186/s13015-020-00167-0

Non-parametric and semi-parametric support estimation using SEquential RESampling random walks on biomolecular sequences
Cited by: 1
Author(s): Wei Wang, J. Torquil Smith, Hussein A. Hejase, Kevin J. Liu
Software Mentions: 2
Published: over 4 years ago

10.1186/1471-2229-12-214

Positive- and negative-acting regulatory elements contribute to the tissue-specific expression of INNER NO OUTER, a YABBY-type transcription factor gene in Arabidopsis
Cited by: 22
Author(s): Marissa Simon, Luis A. Williams, Kristina Brady-Passerini, Raymond S. Brown, Charles S. Gasser
Software Mentions: 2
Published: about 12 years ago

10.3390/s18092813

New DoS Defense Method Based on Strong Designated Verifier Signatures
Cited by: 12
Author(s): Marcone Pereira de Almeida, Rafael Timóteo de Sousa Júnior, Luis Javier García Villalba, Tai-hoon Kim
Software Mentions: 2
Published: about 6 years ago

10.7554/eLife.05899

Non-allelic gene conversion enables rapid evolutionary change at multiple regulatory sites encoded by transposable elements
Cited by: 31
Author(s): Chris Ellison, Doris Bachtrog
Software Mentions: 2
Published: almost 10 years ago

10.1111/nbu.12408

Food additives: Assessing the impact of exposure to permitted emulsifiers on bowel and metabolic health – introducing the FADiets study
Cited by: 67
Author(s): D. Partridge, Kate Lloyd, Jonathan M. Rhodes, Alan W. Walker, Alexandra M. Johnstone, Barry J. Campbell
Software Mentions: 2
Published: almost 5 years ago