Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: FIREcaller

https://packages.ecosyste.ms/registries/pypi.org/packages/FIREcaller

Python library for detecting Frequently Interacting REgions (FIREs) from Hi-C data
1 version
Latest release: over 4 years ago
13 downloads last month

Papers Mentioning FIREcaller 3

10.3389/fgene.2021.673530

Profiling of 3D Genome Organization in Nasopharyngeal Cancer Needle Biopsy Patient Samples by a Modified Hi-C Approach
Cited by: 3
Author(s): Sambhavi Animesh, Ruchi Choudhary, Bertrand Jern Han Wong, Charlotte Tze Jia Koh, Xin Yi Ng, J. S. H. Tay, Wan-Qin Chong, Jian Han, Leilei Chen, Boon Cher Goh, Melissa J. Fullwood
Software Mentions: 6
Published: about 3 years ago

10.1186/s13059-021-02485-x

Mapping the evolving landscape of super-enhancers during cell differentiation
Cited by: 16
Author(s): Yan Kai, Bin E. Li, Min Zhu, Grace Y Li, Fei Chen, Yingli Han, Hye Young Ji, Stuart H. Orkin, Wenqing Cai, Jialiang Huang, Guo‐Cheng Yuan
Software Mentions: 4
Published: about 3 years ago

10.1016/j.jbc.2021.100581

Super hotspots and super coldspots in the repair of UV-induced DNA damage in the human genome
Cited by: 12
Author(s): Y. Jiang, Wentao Li, Laura A. Lindsey-Boltz, Yuchen Yang, Libing Yun, Aziz Sancar
Software Mentions: 1
Published: almost 4 years ago