Projects: pypi: FIREcaller
https://packages.ecosyste.ms/registries/pypi.org/packages/FIREcaller
Python library for detecting Frequently Interacting REgions (FIREs) from Hi-C data
1 version
Latest release: over 6 years ago
13 downloads last month
Enhanced Analysis
Repository Activity:
README Analysis:
Science Score: 80/100
Starting Score: 100 points
Bonuses:
-
+8
Science terms in README
4 scientific terms found in README
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-10
No science terms in description
No scientific terms found in description
Very Likely Science (80)
Papers Mentioning FIREcaller 3
10.3389/fgene.2021.673530
Profiling of 3D Genome Organization in Nasopharyngeal Cancer Needle Biopsy Patient Samples by a Modified Hi-C ApproachCited by: 3
Author(s): Sambhavi Animesh, Ruchi Choudhary, Bertrand Jern Han Wong, Charlotte Tze Jia Koh, Xin Yi Ng, J. S. H. Tay, Wan-Qin Chong, Jian Han, Leilei Chen, Boon Cher Goh, Melissa J. Fullwood
Software Mentions: 6
Published: almost 5 years ago
10.1186/s13059-021-02485-x
Mapping the evolving landscape of super-enhancers during cell differentiationCited by: 16
Author(s): Yan Kai, Bin E. Li, Min Zhu, Grace Y Li, Fei Chen, Yingli Han, Hye Young Ji, Stuart H. Orkin, Wenqing Cai, Jialiang Huang, Guo‐Cheng Yuan
Software Mentions: 4
Published: almost 5 years ago
10.1016/j.jbc.2021.100581
Super hotspots and super coldspots in the repair of UV-induced DNA damage in the human genomeCited by: 12
Author(s): Y. Jiang, Wentao Li, Laura A. Lindsey-Boltz, Yuchen Yang, Libing Yun, Aziz Sancar
Software Mentions: 1
Published: over 5 years ago