Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: Cython

https://packages.ecosyste.ms/registries/pypi.org/packages/Cython

The Cython compiler for writing C extensions in the Python language.
133 versions
Latest release: about 1 year ago
810 dependent packages
34,763,721 downloads last month

Papers Mentioning Cython 118

LION LBD: a literature-based discovery system for cancer biology
Cited by: 38
Author(s): Sampo Pyysalo, Simon Baker, Imran Ali, Stefan Haselwimmer, Tejas Shah, Andrew Young, Yufan Guo, Johan Högberg, Ulla Stenius, Masashi Narita, Anna-Leena Korhonen
Software Mentions: 1
Published: about 6 years ago

10.1186/s12864-017-3732-4

Efficient detection of viral transmissions with Next-Generation Sequencing data
Cited by: 9
Author(s): Inna Rytsareva, David S. Campo, Yueli Zheng, Seth Sims, Sharma V. Thankachan, Cansu Tetik, Jain Chirag, Sriram P. Chockalingam, Amanda Sue, Srinivas Aluru, Yury Khudyakov
Software Mentions: 1
Published: over 7 years ago

10.3390/jcm10163643

A Reperfusion BOLD-MRI Tissue Perfusion Protocol Reliably Differentiate Patients with Peripheral Arterial Occlusive Disease from Healthy Controls
Cited by: 9
Author(s): Kristina Törngren, Sven V. Eriksson, Jonathan Arvidsson, Mårten Falkenberg, Åse A. Johnsson, Carl Sjöberg, Kerstin Lagerstrand, Joakim Nordanstig
Software Mentions: 1
Published: over 3 years ago

10.1186/s12862-019-1512-2

Trusting the hand that feeds: microbes evolve to anticipate a serial transfer protocol as individuals or collectives
Cited by: 9
Author(s): Bram van Dijk, Jeroen Meijer, Thomas D. Cuypers, Paulien Hogeweg
Software Mentions: 1
Published: about 5 years ago

10.1098/rsos.191858

A hybrid gravity and route choice model to assess vector traffic in large-scale road networks
Cited by: 7
Author(s): Samuel M. Fischer, Martina Beck, Leif-Matthias Herborg, Mark A. Lewis
Software Mentions: 1
Published: over 4 years ago

10.1126/sciadv.aay8544

Activation of adenosine A <sub>2A</sub> receptor by lipids from docosahexaenoic acid revealed by NMR
Cited by: 37
Author(s): Takuya Mizumura, Kazunori Kondo, Masatoshi Kurita, Yutaka Kofuku, Mei Natsume, Shunsuke Imai, Yutaro Shiraishi, Takumi Ueda, Ichio Shimada
Software Mentions: 1
Published: over 4 years ago

10.1038/srep13584

Robust and highly performant ring detection algorithm for 3d particle tracking using 2d microscope imaging
Cited by: 15
Author(s): Eldad Afik
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-16755-x

Dynamic domain arrangement of CheA-CheY complex regulates bacterial thermotaxis, as revealed by NMR
Cited by: 8
Author(s): Yuichi Minato, Takumi Ueda, Asako Machiyama, Hideo Iwaï, Ichio Shimada
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12859-021-04176-7

External features enriched model for biomedical question answering
Cited by: 16
Author(s): Gezheng Xu, Wenge Rong, Yanmeng Wang, Yuanxin Ouyang, Xiong Zhang
Software Mentions: 1
Published: over 3 years ago

10.3389/fgene.2014.00376

Microdomain calcium fluctuations as a colored noise process
Cited by: 9
Author(s): Frederic von Wegner, Nicolas Wieder, Rainer H. A. Fink
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0031966

A Coupled Discrete/Continuum Model for Describing Cancer-Therapeutic Transport in the Lung
Cited by: 46
Author(s): Karin Erbertseder, Johannes Reichold, Bernd Flemisch, Patrick Jenny, Rainer Helmig
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pcbi.1003924

A Neural Population Model Incorporating Dopaminergic Neurotransmission during Complex Voluntary Behaviors
Cited by: 7
Author(s): Stefan Fürtinger, Joel Zinn, Kristina Simonyan
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pcbi.1006106

RIDDLE: Race and ethnicity Imputation from Disease history with Deep LEarning
Cited by: 16
Author(s): Ji-Sung Kim, Xin Gao, Andrey Rzhetsky
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1003756

Blind Predictions of DNA and RNA Tweezers Experiments with Force and Torque
Cited by: 34
Author(s): Fang‐Chieh Chou, Jan Lipfert, Rhiju Das
Software Mentions: 1
Published: over 10 years ago

10.1007/s41109-017-0044-1

Effects of local network topology on the functional reconstruction of spiking neural network models
Cited by: 1
Author(s): Myles Akin, Alexander Onderdonk, Yixin Guo
Software Mentions: 1
Published: over 7 years ago

10.1186/s12859-020-03788-9

Clover: a clustering-oriented de novo assembler for Illumina sequences
Cited by: 1
Author(s): Ming‐Feng Hsieh, Chin Lung Lu, Chuan Yi Tang
Software Mentions: 1
Published: about 4 years ago

10.1186/s12859-016-1170-y

PWHATSHAP: efficient haplotyping for future generation sequencing
Cited by: 11
Author(s): Andrea Bracciali, Marco Aldinucci, Murray Patterson, Tobias Marschall, Nadia Pisanti, Ivan Merelli, Massimo Torquati
Software Mentions: 1
Published: about 8 years ago