pypi: Ctrax | Projects | Ecosyste.ms: Papers

10.1093/hmg/ddt243

Drosophila TDP-43 dysfunction in glia and muscle cells cause cytological and behavioural phenotypes that characterize ALS and FTLD
Cited by: 68
Author(s): Danielle C. Diaper, Yoshiyuki Adachi, Luke Lazarou, Max Greenstein, Fabio A. Simoes, Angelique di Domenico, Daniel A. Solomon, Simon Lowe, Rawan AlSubaie, Daryl Cheng, Stephen T. Buckley, Dickon M. Humphrey, Christopher E. Shaw, Frank Hirth
Software Mentions: 4
Published: over 11 years ago

10.3389/fnbeh.2021.628662

Transcriptome Analysis of NPFR Neurons Reveals a Connection Between Proteome Diversity and Social Behavior
Cited by: 5
Author(s): Julia Ryvkin, Assa Bentzur, Anat Shmueli, Miriam Tannenbaum, Omri Shallom, Shiran Dokarker, Jennifer I. C. Benichou, Mali Levi, Galit Shohat-Ophir
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0255117

Estimating the effect of tracking tag weight on insect movement using video analysis: A case study with a flightless orthopteran
Cited by: 5
Author(s): Oto Kaláb, David Musiolek, Pavel Rusnok, Petr Hurtík, Martin Tomis, Petr Kočárek
Software Mentions: 3
Published: about 3 years ago

10.1098/rspb.2015.1132

Brain size affects the behavioural response to predators in female guppies ( Poecilia reticulata )
Cited by: 66
Author(s): Wouter van der Bijl, Malin Thyselius, Alexander Kotrschal, Niclas Kolm
Software Mentions: 3
Published: about 9 years ago

10.1371/journal.pone.0185968

Recurrence analysis of ant activity patterns
Cited by: 10
Author(s): Felipe Marcel Neves, Ricardo L. Viana, Márcio R. Pie
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-019-40952-5

Automated real-time quantification of group locomotor activity in Drosophila melanogaster
Cited by: 26
Author(s): Kristin M. Scaplen, Nicholas J. Mei, Hayley A. Bounds, Sophia Song, Reza Azanchi, Karla R. Kaun
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pbio.2002702

The €100 lab: A 3D-printable open-source platform for fluorescence microscopy, optogenetics, and accurate temperature control during behaviour of zebrafish, Drosophila, and Caenorhabditis elegans
Cited by: 135
Author(s): André Maia Chagas, Lucía L. Prieto-Godino, Aristides B. Arrenberg, Tom Baden
Software Mentions: 2
Published: about 7 years ago

10.7554/eLife.58942

Cell types and neuronal circuitry underlying female aggression in Drosophila
Cited by: 49
Author(s): Catherine E. Schretter, Yoshinori Aso, Alice A. Robie, Marisa Dreher, Michael J. Dolan, Nan Chen, Masayoshi Ito, Tansy Yang, Ruchi Parekh, Kristin Branson, Gerald M. Rubin
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0243631

Examination of an averaging method for estimating repulsion and attraction interactions in moving groups
Cited by: 6
Author(s): Rajnesh K. Mudaliar, Timothy M. Schaerf
Software Mentions: 2
Published: almost 4 years ago

10.1155/2018/2591924

Aquatic Toxic Analysis by Monitoring Fish Behavior Using Computer Vision: A Recent Progress
Cited by: 32
Author(s): Chunlei Xia, Longwen Fu, Liu Zuo-yi, Hui Liu, Lingxin Chen, Yuedan Liu
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0048381

Fluorescence Behavioral Imaging (FBI) Tracks Identity in Heterogeneous Groups of Drosophila
Cited by: 13
Author(s): Pavan Ramdya, Thomas Schaffter, Dario Floreano, Richard Benton
Software Mentions: 2
Published: almost 12 years ago

10.3791/1096

High-Resolution Video Tracking of Locomotion in Adult Drosophila Melanogaster.
Cited by: 18
Author(s): Justin B. Slawson, Eugene Z. Kim, Leslie C. Griffith
Software Mentions: 2
Published: over 15 years ago

10.3389/fpsyg.2016.00539

Understanding Dynamics of Information Transmission in Drosophila melanogaster Using a Statistical Modeling Framework for Longitudinal Network Data (the RSiena Package)
Cited by: 12
Author(s): Cristian Pasquaretta, Elizabeth Klenschi, Jérôme Pansanel, Marine Battesti, Frédéric Mery, Cédric Sueur
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0224243

MARGO (Massively Automated Real-time GUI for Object-tracking), a platform for high-throughput ethology
Cited by: 23
Author(s): Zachary Werkhoven, Christian Rohrsen, Chuan Qin, Björn Brembs, Benjamin de Bivort
Software Mentions: 2
Published: almost 5 years ago

10.1242/dmm.043885

L-type voltage-gated calcium channel agonists mitigate hearing loss and modify ribbon synapse morphology in the zebrafish model of Usher syndrome type 1
Cited by: 5
Author(s): Alaa Koleilat, Joseph Dugdale, Trace A. Christenson, Jeffrey L Bellah, Aaron Lambert, Mark A. Masino, Stephen C. Ekker, Lisa A. Schimmenti
Software Mentions: 2
Published: almost 4 years ago

10.1016/j.conb.2011.11.004

The surveillance state of behavioral automation
Cited by: 86
Author(s): Andreas T. Schaefer, Adam Claridge‐Chang
Software Mentions: 1
Published: over 12 years ago

10.1242/dmm.032482

Feeding difficulties, a key feature of the Drosophila NDUFS4 mitochondrial disease model
Cited by: 14
Author(s): Sarah Foriel, Julien Beyrath, Ilse Eidhof, Richard J. Rodenburg, Annette Schenck, Jan A.M. Smeitink
Software Mentions: 1
Published: over 6 years ago

10.1002/ece3.1529

BEMOVI, software for extracting behavior and morphology from videos, illustrated with analyses of microbes
Cited by: 86
Author(s): Frank Pennekamp, Nicolas Schtickzelle, Owen L. Petchey
Software Mentions: 1
Published: over 9 years ago

10.3389/fnbeh.2020.00056

A Novel Thermal-Visual Place Learning Paradigm for Honeybees (Apis mellifera)
Cited by: 1
Author(s): Ricarda Scheiner, Felix Frantzmann, Maria Jäger, Oliver Mitesser, Charlotte Helfrich‐Förster, Dennis Pauls
Software Mentions: 1
Published: over 4 years ago

10.3389/fnbeh.2018.00280

Sugar Intake Elicits Intelligent Searching Behavior in Flies and Honey Bees
Cited by: 21
Author(s): Axel Brockmann, Prabir Basu, Manal Shakeel, Satoshi Murata, Naomi Murashima, Ravi Kumar Boyapati, Nikhil G Prabhu, Jacob Herman, Teiichi Tanimura
Software Mentions: 1
Published: almost 6 years ago

10.3389/fneur.2015.00080

Circadian Clock Dysfunction and Psychiatric Disease: Could Fruit Flies have a Say?
Cited by: 14
Author(s): Mauro Agostino Zordan, Federica Sandrelli
Software Mentions: 1
Published: over 9 years ago

10.1126/sciadv.aaw4099

Nerve injury drives a heightened state of vigilance and neuropathic sensitization in Drosophila
Cited by: 43
Author(s): Thang M. Khuong, Qiao‐Ping Wang, John Manion, Lisa J. Oyston, Man-Tat Lau, Harry Towler, Yong Lin, G. Gregory Neely
Software Mentions: 1
Published: about 5 years ago

10.1038/srep10432

Long-duration animal tracking in difficult lighting conditions
Cited by: 8
Author(s): Ulrich Stern, Edward Y. Zhu, Ruo He, Chung-Hui Yang
Software Mentions: 1
Published: about 9 years ago

10.1038/srep14351

Analyzing animal behavior via classifying each video frame using convolutional neural networks
Cited by: 33
Author(s): Ulrich Stern, Ruo He, Chung-Hui Yang
Software Mentions: 1
Published: almost 9 years ago

10.7554/eLife.04580

Mushroom body output neurons encode valence and guide memory-based action selection in Drosophila
Cited by: 524
Author(s): Yoshinori Aso, Divya Sitaraman, Toshiharu Ichinose, Karla R. Kaun, Katrin Vogt, Ghislain Belliart-Guérin, Pierre Yves Plaçais, Alice A. Robie, Nobuhiro Yamagata, Christopher Schnaitmann, William J Rowell, Rebecca M. Johnston, Teri T.B. Ngo, Nan Chen, Wyatt Korff, Michael N. Nitabach, Ulrike Heberlein, Thomas Préat, Kristin Branson, Hiromu Tanimoto, Gerald M. Rubin
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.42455

A conserved morphogenetic mechanism for epidermal ensheathment of nociceptive sensory neurites
Cited by: 34
Author(s): Nan Jiang, Jeffrey P. Rasmussen, Joshua A. Clanton, Marci F. Rosenberg, Kory P Luedke, Mark R. Cronan, Edward D Parker, Hyeonjin Kim, Joshua C. Vaughan, Alvaro Sagasti, Jay Z. Parrish
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.46165

Sweet neurons inhibit texture discrimination by signaling TMC-expressing mechanosensitive neurons in Drosophila
Cited by: 27
Author(s): Shun‐Fan Wu, Ya-Long Ja, Yijie Zhang, Chung-Hui Yang
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pcbi.1004577

Fluctuation-Driven Neural Dynamics Reproduce Drosophila Locomotor Patterns
Cited by: 6
Author(s): Andrea Maesani, Pavan Ramdya, Steeve Cruchet, Kyle Gustafson, Richard Benton, Dario Floreano
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pcbi.1006410

A simple computer vision pipeline reveals the effects of isolation on social interaction dynamics in Drosophila
Cited by: 18
Author(s): Guangda Liu, Tanmay Nath, Gerit Arne Linneweber, Annelies Claeys, Zhengyu Guo, Jin Li, Mercedes Bengochea, S. De Backer, Barbara Weyn, Manu Sneyders, Hans Nicasy, Peng Yu, Paul Scheunders, Bassem Hassan
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pgen.1008184

Drosophila ADCK1 is critical for maintaining mitochondrial structures and functions in the muscle
Cited by: 18
Author(s): Woongchang Yoon, Sun-Hong Hwang, Sang‐Hee Lee, Jongkyeong Chung
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pgen.1007980

Glial response to hypoxia in mutants of NPAS1/3 homolog Trachealess through Wg signaling to modulate synaptic bouton organization
Cited by: 5
Author(s): Peiyi Chen, Yi-Wei Tsai, Ying-Ju Cheng, Angela Giangrande, Ching‐Te Chien
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pntd.0004063

Ergot Alkaloids (Re)generate New Leads as Antiparasitics
Cited by: 19
Author(s): John D. Chan, Prince N Agbedanu, Thomas Grab, Mostafa Zamanian, Peter I. Dosa, Tim A. Day, Jonathan S. Marchant
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0184622

Social interactions between live and artificial weakly electric fish: Electrocommunication and locomotor behavior of Mormyrus rume proboscirostris towards a mobile dummy fish
Cited by: 13
Author(s): Martin Worm, Frank Kirschbaum, Gerhard von der Emde
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0084656

Development of a New Method to Track Multiple Honey Bees with Complex Behaviors on a Flat Laboratory Arena
Cited by: 23
Author(s): Tsuyoshi Kimura, Mizue Ohashi, Karl Crailsheim, Thomas Schmickl, Ryuichi Okada, Gerald Radspieler, Hidetoshi Ikeno
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0211652

Conserved regulation of neurodevelopmental processes and behavior by FoxP in Drosophila
Cited by: 24
Author(s): Anna Castells-Nobau, Ilse Eidhof, Michaela Fencková, Dova B Brenman-Suttner, Jolanda M. Scheffer-de Gooyert, Sheren Christine, Rosa L. Schellevis, Kiran van der Laan, Christine Quentin, Lisa van Ninhuijs, Falko Hofmann, Radoslaw K. Ejsmont, Simon E. Fisher, Jamie M. Kramer, Stephan J. Sigrist, Anne F. Simon, Annette Schenck
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0223034

Activation of specific mushroom body output neurons inhibits proboscis extension and sucrose consumption
Cited by: 10
Author(s): Justine Chia, Kristin Scott
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0008793

A New Chamber for Studying the Behavior of Drosophila
Cited by: 110
Author(s): Jasper C. Simon, Michael H. Dickinson
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0239504

Tracking individual honeybees among wildflower clusters with computer vision-facilitated pollinator monitoring
Cited by: 39
Author(s): Malika Nisal Ratnayake, Adrian G. Dyer, Alan Dorin
Software Mentions: 1
Published: over 3 years ago

10.1038/s42003-020-1024-z

Drosophila melanogaster behaviour changes in different social environments based on group size and density
Cited by: 31
Author(s): Rebecca Rooke, Amara Rasool, Jonathan Schneider, Joel D. Levine
Software Mentions: 1
Published: over 4 years ago

10.1038/s42003-019-0362-1

Robust mouse tracking in complex environments using neural networks
Cited by: 45
Author(s): Brian Q. Geuther, Sean Deats, Kai J Fox, Steve Murray, Robert E. Braun, Jacqueline K. White, Elissa J. Chesler, Cathleen Lutz, Vivek Kumar
Software Mentions: 1
Published: over 5 years ago

10.1016/j.cub.2019.06.082

A Single MicroRNA-Hox Gene Module Controls Equivalent Movements in Biomechanically Distinct Forms of Drosophila
Cited by: 11
Author(s): Abdul-Raouf Issa, João Picão-Osório, Nuno Rito, M. Eugenia Chiappe, Claudio R. Alonso
Software Mentions: 1
Published: about 5 years ago

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Papers Mentioning Ctrax 41