Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: CouchDB
https://packages.ecosyste.ms/registries/pypi.org/packages/CouchDB
Python library for working with CouchDB
15 versions
Latest release: over 6 years ago
12 dependent packages
31,676 downloads last month
Papers Mentioning CouchDB 55
10.1039/d0sc05337f
A data-driven perspective on the colours of metal–organic frameworksCited by: 14
Author(s): Kevin Maik Jablonka, Seyed Mohamad Moosavi, Mehrdad Asgari, Christopher P. Ireland, Luc Patiny, Berend Smit
Software Mentions: 14
Published: almost 4 years ago
10.1002/pmic.201400377
Open source libraries and frameworks for biological data visualisation: A guide for developersCited by: 37
Author(s): Rui Wang, Yasset Perez‐Riverol, Henning Hermjakob, Juan Antonio Vizcaíno
Software Mentions: 8
Published: over 9 years ago
10.1371/journal.pcbi.1000589
A Quick Guide for Developing Effective Bioinformatics Programming SkillsCited by: 45
Author(s): Joel T. Dudley, Atul J. Butte
Software Mentions: 7
Published: almost 15 years ago
10.1186/s13742-016-0131-8
Gigwa—Genotype investigator for genome-wide analysesCited by: 18
Author(s): Guilhem Sempéré, Philippe Florian, Alexis Dereeper, Manuel Ruiz, Gautier Sarah, Pierre Larmande
Software Mentions: 5
Published: over 8 years ago
10.3390/s18041181
Hadoop Oriented Smart Cities ArchitectureCited by: 19
Author(s): Vlad Dıaconıța, Ana-Ramona Bologa, Răzvan Bologa
Software Mentions: 5
Published: over 6 years ago
10.3390/s21030772
Multi-Layer Blockchain-Based Security Architecture for Internet of ThingsCited by: 58
Author(s): Houshyar Honar Pajooh, M. A. Rashid, Fakhrul Alam, Serge Demidenko
Software Mentions: 4
Published: almost 4 years ago
10.1186/1471-2105-15-176
QMachine: commodity supercomputing in web browsersCited by: 17
Author(s): Sean R. Wilkinson, Jonas S. Almeida
Software Mentions: 4
Published: over 10 years ago
10.1093/database/baab047
OUP accepted manuscriptCited by: 1
Author(s): Song Gu, Guangjie Zhang, Si Qin, Jiawen Dai, Zhen Song, Yingshuang Wang
Software Mentions: 4
Published: almost 4 years ago
10.3390/s20123604
Towards a Secure Thermal-Energy Aware Routing Protocol in Wireless Body Area Network Based on Blockchain TechnologyCited by: 60
Author(s): Zeinab Shahbazi, Yung-Cheol Byun
Software Mentions: 4
Published: over 4 years ago
10.7717/peerj.6739
Ozymandias: a biodiversity knowledge graphCited by: 18
Author(s): Roderic Page
Software Mentions: 3
Published: over 5 years ago
10.3389/fninf.2018.00091
Integration of “omics” Data and Phenotypic Data Within a Unified Extensible Multimodal FrameworkCited by: 4
Author(s): Samir Das, Xavier Boucher, C. F. Rogers, Carolina Makowski, François Chouinard-Decorte, Kathleen Klein, Natacha Beck, Pierre Rioux, Shawn T. Brown, Zia Mohaddes, Cole Zweber, V. Foing, Marie Forest, Kieran J. O’Donnell, Joanne Clark, Michael J. Meaney, Celia Greenwood, Alan C. Evans
Software Mentions: 3
Published: almost 6 years ago
10.1186/s12859-018-2334-8
A new cross-platform architecture for epi-info software suiteCited by: 7
Author(s): Blake Camp, Jaya Krishna Mandivarapu, Nagashayana Ramamurthy, James Wingo, Anu G. Bourgeois, Xiaojun Cao, Rajshekhar Sunderraman
Software Mentions: 3
Published: about 6 years ago
10.3390/healthcare9081016
Development of a System for Storing and Executing Bio-Signal Analysis Algorithms Developed in Different LanguagesCited by: 0
Author(s): Moon-Il Joo, Satyabrata Aich, Hee Cheol Kim
Software Mentions: 3
Published: about 3 years ago
10.7717/peerj-cs.297
Data in the time of COVID-19: a general methodology to select and secure a NoSQL DBMS for medical dataCited by: 9
Author(s): Kamal A. ElDahshan, Abd Allah A. AlHabshy, Gaber E. Abutaleb
Software Mentions: 3
Published: about 4 years ago
10.3390/s21051640
Towards Secure Fitness Framework Based on IoT-Enabled Blockchain Network Integrated with Machine Learning AlgorithmsCited by: 42
Author(s): Faisal Jamil, Hyun Kook Kahng, Su Yeon Kim, Do‐Hyeun Kim
Software Mentions: 3
Published: over 3 years ago
10.3390/s16071022
Collaboration-Centred Cities through Urban Apps Based on Open and User-Generated DataCited by: 14
Author(s): Unai Aguilera, Diego López-de-Ipiña, Jorge Pérez
Software Mentions: 3
Published: over 8 years ago
10.2196/13385
Secure and Scalable mHealth Data Management Using Blockchain Combined With Client Hashchain: System Design and ValidationCited by: 29
Author(s): Tomomitsu Motohashi, Tomonobu Hirano, Kosuke Okumura, Makiko Kashiyama, Daisuke Ichikawa, Taro Ueno
Software Mentions: 2
Published: over 5 years ago
10.1186/1471-2164-15-S8-S3
High dimensional biological data retrieval optimization with NoSQL technologyCited by: 32
Author(s): Shicai Wang, Ioannis Pandis, Chao Wu, Sijin He, David Johnson, Ibrahim Emam, Florian Guitton, Yike Guo
Software Mentions: 2
Published: about 10 years ago
10.1093/bib/bbw054
BrowseVCF: a web-based application and workflow to quickly prioritize disease-causative variants in VCF filesCited by: 20
Author(s): Silvia Salatino, Varun Ramraj
Software Mentions: 2
Published: over 8 years ago
10.1371/currents.tol.8f3c6526c49b136b98ec28e00b570a1e
Visualising Geophylogenies in Web Maps Using GeoJSONCited by: 5
Author(s): Roderic Page
Software Mentions: 2
Published: almost 10 years ago
10.1371/journal.pone.0079728
C-PAmP: Large Scale Analysis and Database Construction Containing High Scoring Computationally Predicted Antimicrobial Peptides for All the Available Plant SpeciesCited by: 32
Author(s): Anastasia Niarchou, Αναστασία Αλεξανδρίδου, Emmanouil Athanasiadis, George M. Spyrou
Software Mentions: 2
Published: almost 11 years ago
10.1371/journal.pone.0243043
Healthchain: A novel framework on privacy preservation of electronic health records using blockchain technologyCited by: 57
Author(s): Shekha Chenthara, Khandakar Ahmed, Hua Wang, Frank Whittaker, Zhenxiang Chen
Software Mentions: 2
Published: almost 4 years ago
10.1093/database/baz032
A late-binding, distributed, NoSQL warehouse for integrating patient data from clinical trialsCited by: 10
Author(s): Eric Yang, Jeremy D Scheff, Shih Chuan Shen, Michael Farnum, James E. Sefton, Victor S. Lobanov, Dimitris Agrafiotis
Software Mentions: 2
Published: almost 6 years ago
10.1093/database/bat081
RefPrimeCouch—a reference gene primer CouchAppCited by: 1
Author(s): Jascha Silbermann, Catrin Wernicke, Heike Pospisil, Marcus Frohme
Software Mentions: 2
Published: almost 12 years ago
10.3389/fnins.2016.00365
COINSTAC: A Privacy Enabled Model and Prototype for Leveraging and Processing Decentralized Brain Imaging DataCited by: 72
Author(s): Sergey M. Plis, Anand D. Sarwate, Dylan Wood, Christopher Dieringer, Drew Landis, Cory Reed, Sandeep R. Panta, Jessica A. Turner, Jody M. Shoemaker, Kim W. Carter, Paul M. Thompson, Kent E. Hutchison, Vince D. Calhoun
Software Mentions: 2
Published: about 8 years ago
10.1186/s13059-020-02258-y
Alternative splicing landscapes in Arabidopsis thaliana across tissues and stress conditions highlight major functional differences with animalsCited by: 84
Author(s): Guiomar Martín, Yamile Márquez, Federica Mantica, Paula Duque, Manuel Irimia
Software Mentions: 2
Published: almost 4 years ago
10.1080/16549716.2018.1517930
Development of mWellcare: an mHealth intervention for integrated management of hypertension and diabetes in low-resource settingsCited by: 29
Author(s): Devraj Jindal, Priti Gupta, Dilip Kumar Jha, Vamadevan S. Ajay, Shifalika Goenka, Pramod Jacob, Kriti Mehrotra, Pablo Perel, Jonathan Nyong, Ambuj Roy, Nikhil Tandon, Dorairaj Prabhakaran, Vikram Patel
Software Mentions: 2
Published: almost 7 years ago
10.3390/healthcare8030257
GENE2D: A NoSQL Integrated Data Repository of Genetic Disorders DataCited by: 2
Author(s): Halima E. Samra, Alice Li, Ben Soh
Software Mentions: 2
Published: over 4 years ago
10.3390/s18092946
Performance Analysis of IoT-Based Sensor, Big Data Processing, and Machine Learning Model for Real-Time Monitoring System in Automotive ManufacturingCited by: 202
Author(s): Muhammad Syafrudin, Ganjar Alfian, Norma Latif Fitriyani, Jongtae Rhee
Software Mentions: 2
Published: about 6 years ago
10.3390/s21020359
Hyperledger Fabric Blockchain for Securing the Edge Internet of ThingsCited by: 38
Author(s): Houshyar Honar Pajooh, M. A. Rashid, Fakhrul Alam, Serge Demidenko
Software Mentions: 2
Published: almost 4 years ago
10.3390/s21093049
UTM-Chain: Blockchain-Based Secure Unmanned Traffic Management for Internet of DronesCited by: 40
Author(s): Azza Allouch, Omar Cheikhrouhou, Anis Koubâa, Khalifa Toumi, Mohamed Khalgui, Tuan Nguyen Gia
Software Mentions: 2
Published: over 3 years ago
10.2196/13598
ACTION-EHR: Patient-Centric Blockchain-Based Electronic Health Record Data Management for Cancer CareCited by: 92
Author(s): Alevtina Dubovitskaya, Furqan Baig, Zhigang Xu, Rohit Shukla, Pratik Sushil Zambani, Arun Swaminathan, Md Majid Jahangir, Khadija Chowdhry, Rahul Lachhani, Nitesh Idnani, Michael Schumacher, Karl Aberer, Scott D. Stoller, Samuel Ryu, Fusheng Wang
Software Mentions: 2
Published: about 4 years ago
10.1186/2047-2501-2-3
Big data analytics in healthcare: promise and potentialCited by: 1,900
Author(s): Wullianallur Raghupathi, Viju Raghupathi
Software Mentions: 1
Published: over 10 years ago
10.1186/s12859-015-0861-0
BigQ: a NoSQL based framework to handle genomic variants in i2b2Cited by: 21
Author(s): Matteo Gabetta, Ivan Limongelli, Ettore Rizzo, Alberto Riva, Daniele Segagni
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.pone.0098790
openPDS: Protecting the Privacy of Metadata through SafeAnswersCited by: 192
Author(s): Yves-Alexandre de Montjoye, Erez Shmueli, Samuel S. Wang, Alex Pentland
Software Mentions: 1
Published: over 10 years ago
10.1200/CCI.19.00144
Predicting Cancer Cell Line Dependencies From the Protein Expression Data of Reverse-Phase Protein ArraysCited by: 9
Author(s): Mei-Ju May Chen, Jun Li, Gordon B. Mills, Han Liang
Software Mentions: 1
Published: about 4 years ago
10.1371/journal.pone.0082452
Signs & Symptoms of Dextromethorphan Exposure from YouTubeCited by: 13
Author(s): Michael Chary, Emily H. Park, Andrew McKenzie, Julia B. Sun, Alex F. Manini, Nicholas Genes
Software Mentions: 1
Published: over 10 years ago
10.1098/rsos.180625
Design and implementation of levee project information management system based on WebGISCited by: 7
Author(s): Bin Zhang, Yi-wei Ye, Xizhong Shen, Gang Mei, Hanxun Wang
Software Mentions: 1
Published: over 6 years ago
10.1155/2014/490824
PhysioDroid: Combining Wearable Health Sensors and Mobile Devices for a Ubiquitous, Continuous, and Personal MonitoringCited by: 78
Author(s): Oresti Baños, Claudia Villalonga, Miguel Damas, Peter Glösekötter, H. Pomares, Ignacio Rojas
Software Mentions: 1
Published: almost 11 years ago
10.1371/journal.pone.0172187
Combining clinical and genomics queries using i2b2 – Three methodsCited by: 23
Author(s): Shawn N. Murphy, Paul Avillach, Riccardo Bellazzi, Lori C. Phillips, Matteo Gabetta, Alal Eran, Michael McDuffie, Isaac S. Kohane
Software Mentions: 1
Published: over 7 years ago
10.7717/peerj.190
BioNames: linking taxonomy, texts, and treesCited by: 35
Author(s): Roderic Page
Software Mentions: 1
Published: about 11 years ago
10.3390/s18093021
Edge Computing Based IoT Architecture for Low Cost Air Pollution Monitoring Systems: A Comprehensive System Analysis, Design Considerations & DevelopmentCited by: 75
Author(s): Zeba Idrees, Zhuo Zou, Lirong Zheng
Software Mentions: 1
Published: about 6 years ago
10.3390/s21113822
Blockchain Based Transaction System with Fungible and Non-Fungible Tokens for a Community-Based Energy InfrastructureCited by: 46
Author(s): Nikita Karandikar, Antorweep Chakravorty, Chunming Rong
Software Mentions: 1
Published: over 3 years ago
10.3390/membranes11060424
A Modular Approach for a Patient Unit for Extracorporeal Membrane Oxygenation SimulatorCited by: 6
Author(s): Yahya Alhomsi, Abdullah Alsalemi, Mohammad Noorizadeh, Fayçal Bensaali, Nader Meskin, Ali Ait Hssain
Software Mentions: 1
Published: over 3 years ago
10.3390/s20154252
Smart Contract Centric Inference Engine For Intelligent Electric Vehicle Transportation SystemCited by: 25
Author(s): Prince Waqas Khan, Yung-Cheol Byun
Software Mentions: 1
Published: over 4 years ago
10.1093/database/bau129
OntoMate: a text-mining tool aiding curation at the Rat Genome DatabaseCited by: 18
Author(s): Weisong Liu, Stanley J. F. Laulederkind, G. Thomas Hayman, Shur-Jen Wang, Rajni Nigam, Jennifer Smith, Jeff De Pons, Melinda R. Dwinell, Mary Shimoyama
Software Mentions: 1
Published: almost 10 years ago
10.3390/s20226587
A Privacy-Preserving Healthcare Framework Using Hyperledger FabricCited by: 71
Author(s): Charalampos Stamatellis, Pavlos Papadopoulos, Nikolaos Pitropakis, Sokratis K. Katsikas, William J. Buchanan
Software Mentions: 1
Published: almost 4 years ago
10.1007/s10916-020-1538-4
Graph-Representation of Patient Data: a Systematic Literature ReviewCited by: 14
Author(s): Jens Schrodt, Aleksei Dudchenko, Petra Knaup, Matthias Ganzinger
Software Mentions: 1
Published: over 4 years ago
10.1155/2017/6120820
Using Distributed Data over HBase in Big Data Analytics Platform for Clinical ServicesCited by: 15
Author(s): Dillon Chrimes, Hamid Zamani
Software Mentions: 1
Published: almost 8 years ago
10.1007/s10661-020-08535-4
Smart water consumption measurement system for houses using IoT and cloud computingCited by: 35
Author(s): Henry Fuentes, David Mauricio
Software Mentions: 1
Published: about 4 years ago
10.1371/journal.pone.0095978
Measuring Large-Scale Social Networks with High ResolutionCited by: 316
Author(s): Arkadiusz Stopczynski, Vedran Sekara, Piotr Sapieżyński, Andrea Cuttone, Mette My Madsen, Jakob Eg Larsen, Sune Lehmann
Software Mentions: 1
Published: over 10 years ago
10.1186/s12911-017-0515-4
Examining database persistence of ISO/EN 13606 standardized electronic health record extracts: relational vs. NoSQL approachesCited by: 12
Author(s): Ricardo Sánchez-de-Madariaga, Adolfo Muñoz, Raimundo Lozano-Rubí, Pablo Serrano Balazote, Antonio Castro, Oscar Moreno, Mario Pascual
Software Mentions: 1
Published: about 7 years ago
10.1186/1471-2164-15-S3-S3
A digital repository with an extensible data model for biobanking and genomic analysis managementCited by: 14
Author(s): Massimiliano Izzo, Francesco Mortola, Gabriele Arnulfo, Marco Fato, Luigi Varesio
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0115585
ReNE: A Cytoscape Plugin for Regulatory Network EnhancementCited by: 15
Author(s): Gianfranco Politano, Alfredo Benso, Alessandro Savino, Stefano Di Carlo
Software Mentions: 1
Published: almost 10 years ago
10.3390/s21062152
Recent Advances in Internet of Things (IoT) Infrastructures for Building Energy Systems: A ReviewCited by: 26
Author(s): Wahiba Yaïci, Karthik Krishnamurthy, Evgueniy Entchev, Michela Longo
Software Mentions: 1
Published: over 3 years ago