10.1007/s00122-020-03650-9

Phenotypic characterisation and linkage mapping of domestication syndrome traits in yellow lupin (Lupinus luteus L.)
Cited by: 14
Author(s): Muhammad Munir Iqbal, William Erskine, Jens Berger, Matthew N. Nelson
Software Mentions: 1
Published: about 6 years ago

10.7150/thno.45816

Autoantibody profiling identifies predictive biomarkers of response to anti-PD1 therapy in cancer patients
Cited by: 24
Author(s): Qiaoyun Tan, Dan Wang, Jianliang Yang, Puyuan Xing, Sheng Yang, Yang Li, Yan Qin, Xiaohong He, Yutao Liu, Shengyu Zhou, Haibao Duan, Te Liang, Haoyu Wang, Yanrong Wang, Shiyu Jiang, Fu Zhao, Qun Zhong, Yu Zhou, Shasha Wang, Jiayu Dai, Jiarui Yao, Di Wu, Zhishang Zhang, Yan Sun, Xiaohong Han, Xiaobo Yu
Software Mentions: 1
Published: almost 7 years ago

10.7150/thno.49116

Congenital biliary atresia is correlated with disrupted cell junctions and polarity caused by Cdc42 insufficiency in the liver
Cited by: 9
Author(s): Yongjie Zhou, Hongjie Ji, Qing Xu, Xiaoyun Zhang, Xinhui Cao, Yuwei Chen, Meiying Shao, Zhenru Wu, Jie Zhang, Changli Lu, Jiayin Yang, Yujun Shi, Hong Bu
Software Mentions: 1
Published: almost 6 years ago

10.3390/toxins11080475

Bacteriocin Occurrence and Activity in Escherichia coli Isolated from Bovines and Wastewater
Cited by: 28
Author(s): Andrew Cameron, Rahat Zaheer, Emelia H Adator, Ruth Barbieri, Tim Reuter, Tim A. McAllister
Software Mentions: 1
Published: about 7 years ago

10.3390/toxins12020085

Dual Function of a Novel Bacterium, Slackia sp. D-G6: Detoxifying Deoxynivalenol and Producing the Natural Estrogen Analogue, Equol
Cited by: 23
Author(s): Xiaojuan Gao, Peiqiang Mu, Xunhua Zhu, Xiaoxuan Chen, Shulin Tang, Yuting Wu, Xiang Miao, Xiaohan Wang, Jikai Wen, Yiqun Deng
Software Mentions: 1
Published: over 6 years ago

10.3390/toxins13060410

The First Data on the Complete Genome of a Tetrodotoxin-Producing Bacterium
Cited by: 1
Author(s): Daria I. Melnikova, Reindert Nijland, Timur Yu. Magarlamov
Software Mentions: 1
Published: over 5 years ago

10.1038/tp.2017.185

Decreased AGO2 and DCR1 in PBMCs from War Veterans with PTSD leads to diminished miRNA resulting in elevated inflammation
Cited by: 14
Author(s): Marpe Bam, Xiaoming Yang, Elizabeth E. Zumbrun, J. P. Ginsberg, Quinne Leyden, J Zhang, Mitzi Nagarkatti
Software Mentions: 1
Published: about 9 years ago

10.1128/mBio.01169-14

Relaxed Selection Drives a Noisy Noncoding Transcriptome in Members of the Mycobacterium tuberculosis Complex
Cited by: 15
Author(s): Adam M. Dinan, Pin Tong, Amanda J. Lohan, Kevin M. Conlon, Aleksandra A. Miranda-CasoLuengo, Kerri M. Malone, Stephen V. Gordon, Brendan J. Loftus
Software Mentions: 1
Published: about 12 years ago

10.1128/mBio.00699-16

Archaeal<i>Haloarcula californiae</i>Icosahedral Virus 1 Highlights Conserved Elements in Icosahedral Membrane-Containing DNA Viruses from Extreme Environments
Cited by: 15
Author(s): Tatiana A. Demina, Maija K. Pietilä, Julija Svirskaitė, Janne J. Ravantti, Nina S. Atanasova, Dennis H. Bamford, Hanna M. Oksanen
Software Mentions: 1
Published: about 10 years ago

10.1128/mBio.01803-20

<i>In Vivo</i> Genome and Methylome Adaptation of <i>cag</i> -Negative Helicobacter pylori during Experimental Human Infection
Cited by: 12
Author(s): Iratxe Estibariz, Florent Ailloud, Sabrina Woltemate, Boyke Bunk, Cathrin Spröer, Jörg Overmann, Toni Aebischer, Thomas F. Meyer, Christine Josenhans, Sebastian Suerbaum
Software Mentions: 1
Published: about 6 years ago

10.1128/mBio.00965-21

ESX-1-Independent Horizontal Gene Transfer by Mycobacterium tuberculosis Complex Strains
Cited by: 10
Author(s): Jan Madacki, Mickael Orgeur, Guillem Mas Fiol, Wafa Frigui, Laurence Ma, Roland Brosch
Software Mentions: 1
Published: over 5 years ago

10.1128/mSphere.00326-16

A Novel Protective Vaccine Antigen from the Core Escherichia coli Genome
Cited by: 33
Author(s): Danilo Gomes Moriel, Lendl Tan, Kelvin G. K. Goh, Minh-Duy Phan, Deepak S. Ipe, Alvin W. Lo, Kate M. Peters, Glen C. Ulett, Scott A. Beatson, Mark A. Schembri
Software Mentions: 1
Published: almost 10 years ago

10.1128/mSphere.00018-19

Characterizing the Pathogenic, Genomic, and Chemical Traits of <i>Aspergillus fischeri</i> , a Close Relative of the Major Human Fungal Pathogen <i>Aspergillus fumigatus</i>
Cited by: 36
Author(s): Matthew E. Mead, Sonja L. Knowles, Huzefa A. Raja, Sarah R Beattie, Caitlin H. Kowalski, Jacob L. Steenwyk, Lilian Pereira Silva, Jéssica Chiaratto, Laure Nicolas Annick Ries, Gustavo H. Goldman, Robert A. Cramer, Nicholas H. Oberlies, Antonis Rokas
Software Mentions: 1
Published: over 7 years ago

10.1128/mSphere.00807-19

Discovery of Bat Coronaviruses through Surveillance and Probe Capture-Based Next-Generation Sequencing
Cited by: 71
Author(s): Bei Li, Rui Hao, Yan Zhu, Xing Yang, Danielle E. Anderson, Zheng Li Shi, Lin‐Fa Wang, Peng Zhou
Software Mentions: 1
Published: over 6 years ago

10.1128/mSystems.00190-16

Genome Sequence of the Thermotolerant Foodborne Pathogen Salmonella enterica Serovar Senftenberg ATCC 43845 and Phylogenetic Analysis of Loci Encoding Increased Protein Quality Control Mechanisms
Cited by: 24
Author(s): Scott V. Nguyen, Gregory P. Harhay, James L. Bono, Timothy P. L. Smith, Dayna M. Harhay
Software Mentions: 1
Published: over 9 years ago

10.1128/mSystems.00245-19

Hfq Globally Binds and Destabilizes sRNAs and mRNAs in Yersinia pestis
Cited by: 7
Author(s): Yanping Han, Dong Chen, Yanfeng Yan, Xiaofang Gao, Zizhong Liu, Yaqiang Xue, Yi Zhang, Ruifu Yang
Software Mentions: 1
Published: about 7 years ago

10.1128/mSystems.00048-20

Advantages and Limits of Metagenomic Assembly and Binning of a Giant Virus
Cited by: 12
Author(s): Frederik Schulz, Julien Andréani, Rania Francis, Hadjer Boudjemaa, Jacques Bou Khalil, Janey Lee, Bernard La Scola, Tanja Woyke
Software Mentions: 1
Published: over 6 years ago

10.1128/mSystems.00173-21

Investigating the Chemolithoautotrophic and Formate Metabolism of Nitrospira moscoviensis by Constraint-Based Metabolic Modeling and ¹³ C-Tracer Analysis
Cited by: 6
Author(s): Christopher E. Lawson, Aniela B. Mundinger, Hanna Koch, Tyler B. Jacobson, Coty A. Weathersby, Mike S. M. Jetten, Martin Pabst, Daniel Amador‐Noguez, Daniel R. Noguera, Katherine D. McMahon, Sebastian Lücker
Software Mentions: 1
Published: about 5 years ago

10.1002/humu.22589

Structural Genomic Variation as Risk Factor for Idiopathic Recurrent Miscarriage
Cited by: 32
Author(s): Liina Nagirnaja, Priit Palta, Laura Kasak, Kristiina Rull, Ole Bjarne Christiansen, Henriette Svarre Nielsen, Rudi Steffensen, Tõnu Esko, Maido Remm, Maris Laan
Software Mentions: 1
Published: over 12 years ago

10.7150/ijbs.44906

5-HT receptor agonist Valerenic Acid enhances the innate immunity signal and suppresses glioblastoma cell growth and invasion
Cited by: 13
Author(s): Qingli Lu, Ding Yuan, Li Yang
Software Mentions: 1
Published: almost 7 years ago

10.7150/ijbs.32860

The Grass Carp Genomic Visualization Database (GCGVD): an informational platform for genome biology of grass carp
Cited by: 10
Author(s): Min Tang, Ying Lu, Zuhong Xiong, Ming Chen, Yufang Qin
Software Mentions: 1
Published: almost 8 years ago

10.1186/s13046-019-1519-y

lncTUG1/miR-144-3p affect the radiosensitivity of esophageal squamous cell carcinoma by competitively regulating c-MET
Cited by: 35
Author(s): Pan Wang, Zhuanbo Yang, Ting Ye, Fei Shao, Jiagen Li, Nan Sun, Jié He
Software Mentions: 1
Published: over 6 years ago

10.3390/jof6040255

Comparative Genomic Analysis of Dactylonectria torresensis Strains from Grapevine, Soil and Weed Highlights Potential Mechanisms in Pathogenicity and Endophytic Lifestyle
Cited by: 10
Author(s): David Gramaje, Carmen Berlanas, María del Pilar Martínez-Diz, Emilia Díaz Losada, Livio Antonielli, Sabrina Beier, Markus Gorfer, Monika Schmoll, Stéphane Compant
Software Mentions: 1
Published: almost 6 years ago

10.3390/jof7090717

Comparative Whole-Genome Sequence Analyses of Fusarium Wilt Pathogen (Foc R1, STR4 and TR4) Infecting Cavendish (AAA) Bananas in India, with a Special Emphasis on Pathogenicity Mechanisms
Cited by: 6
Author(s): R Thangavelu, Esack Edwin Raj, Gopi Muthukathan, M. Loganathan, Pushpakanth Periyasamy, Marimuthu Natesh, Prabaharan Manivasakan, Sharmila Kotteeswaran, Sasikala Rajendran, S. Uma
Software Mentions: 1
Published: about 5 years ago

10.1155/2018/1705478

Copy Number Variation of Immune-Related Genes and Their Association with Iodine in Adults with Autoimmune Thyroid Diseases
Cited by: 12
Author(s): Xing Jin, Yongjun Guan, Hongmei Shen, Yi Pang, Lixiang Liu, Qi Jia, Fengyan Meng, Xiaoye Zhang
Software Mentions: 1
Published: almost 9 years ago

10.1155/2014/951035

Network Analysis of Plasmidomes: The <i>Azospirillum brasilense</i> Sp245 Case
Cited by: 14
Author(s): Valerio Orlandini, Giovanni Emiliani, Marco Fondi, Isabel Maida, Elena Perrin, Renato Fani
Software Mentions: 1
Published: almost 12 years ago

10.1155/2020/2568640

Characterization and Comparative Analysis of RWP-RK Proteins from <i>Arachis duranensis</i>, <i>Arachis ipaensis</i>, and <i>Arachis hypogaea</i>
Cited by: 3
Author(s): Chenyang Liu, Dongliang Yuan, Tong Liu, Mengge Xing, Wenying Xu, Huiying Zhang, Hanqi Jin, Chunmei Cai, Shuai Li
Software Mentions: 1
Published: about 6 years ago

10.1155/2018/3505428

Genome Analysis of Rhodococcus Sp. DSSKP-R-001: A Highly Effective <i>β</i>-Estradiol-Degrading Bacterium
Cited by: 12
Author(s): Hongyan Zhao, Kejian Tian, Qing Qiu, Yu Wang, Hongyan Zhang, Shuang Ma, Shenbao Jin, Hongliang Huo
Software Mentions: 1
Published: almost 8 years ago

10.1155/2015/536943

Divergence of the bZIP Gene Family in Strawberry, Peach, and Apple Suggests Multiple Modes of Gene Evolution after Duplication
Cited by: 19
Author(s): Xiaolong Wang, Yan Zhong, Zong‐Ming Cheng, Jinsong Xiong
Software Mentions: 1
Published: almost 12 years ago

10.1155/2019/4242653

Complete Genome Sequence of<i>Photobacterium damselae</i>Subsp.<i>damselae</i>Strain SSPD1601 Isolated from Deep-Sea Cage-Cultured<i>Sebastes schlegelii</i>with Septic Skin Ulcer
Cited by: 7
Author(s): Yongxiang Yu, Zheng Zhang, Yingeng Wang, Meijie Liao, Xiaojun Rong, Bin Li, Kai Wang, Jing Chen, Hao Zhang
Software Mentions: 1
Published: over 7 years ago

10.1155/2019/2804134

Genomic Analysis of a New Estrogen-Degrading Bacterial Strain,<i>Acinetobacter</i>sp. DSSKY-A-001
Cited by: 8
Author(s): Qing Qiu, Ping Wang, Hui Kang, Yu Wang, Kejian Tian, Hongliang Huo
Software Mentions: 1
Published: over 7 years ago

10.3390/ijerph17051597

Global Mapping of Interventions to Improve Quality of Life of People with Diabetes in 1990–2018
Cited by: 11
Author(s): Bach Xuan Tran, Long Hoang Nguyen, Ngoc Minh Pham, Huyen Thi Thanh Vu, Hung Trong Nguyen, Duong Huong Phan, Giang Hai Ha, Hai Quang Pham, Thao Phuong Nguyen, Carl A. Latkin, Cyrus S.H. Ho, Roger Ho
Software Mentions: 1
Published: over 6 years ago

10.1038/oncsis.2015.34

Multiple region whole-exome sequencing reveals dramatically evolving intratumor genomic heterogeneity in esophageal squamous cell carcinoma
Cited by: 49
Author(s): Wei Cao, Wei Wu, Ming Yan, Fei Tian, Chi Ma, Q Zhang, X Li, Peng Han, Z Liu, Jianying Gu, Fred G. Biddle
Software Mentions: 1
Published: almost 11 years ago

10.7554/eLife.18990

Insight into the evolution of microbial metabolism from the deep-branching bacterium, Thermovibrio ammonificans
Cited by: 39
Author(s): Donato Giovannelli, Stefan M. Sievert, Michael Hügler, Stephanie Markert, Dörte Becher, Thomas Schweder, Costantino Vetriani
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.12994

Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus
Cited by: 124
Author(s): Kirsten I. Bos, Alexander Herbig, Jason W. Sahl, Nicholas Waglechner, Mathieu Fourment, Stephen Forrest, Jennifer Klunk, Verena J. Schuenemann, Debi Poinar, Melanie Kuch, G. Brian Golding, Olivier Dutour, Paul Keim, David M. Wagner, Edward C. Holmes, Johannes Krause, Hendrik N. Poinar
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.19103

A comprehensive excitatory input map of the striatum reveals novel functional organization
Cited by: 347
Author(s): Barbara J. Hunnicutt, Bart C. Jongbloets, William T. Birdsong, Katrina J Gertz, Haining Zhong, Tianyi Mao
Software Mentions: 1
Published: almost 10 years ago

10.7554/eLife.54136

The landscape of coadaptation in Vibrio parahaemolyticus
Cited by: 14
Author(s): Yu‐Jun Cui, Chao Yang, Hongling Qiu, Hui Wang, Ruifu Yang, Daniel Falush
Software Mentions: 1
Published: over 6 years ago

10.3390/ijms141224169

Genome-Wide Analysis of Respiratory Burst Oxidase Homologs in Grape (Vitis vinifera L.)
Cited by: 39
Author(s): Chenxia Cheng, Xiaozhao Xu, Min Gao, Jun Li, Chunfang Guo, Junyang Song, Xiping Wang
Software Mentions: 1
Published: almost 13 years ago

10.3390/ijms16048517

Genome-Wide Identification and Evolution of HECT Genes in Soybean
Cited by: 13
Author(s): Xianwen Meng, Chen Wang, Siddiq Ur Rahman, Yaxu Wang, Ailan Wang, Shiheng Tao
Software Mentions: 1
Published: over 11 years ago

10.3390/ijms161023517

Systematic Analysis of the Maize PHD-Finger Gene Family Reveals a Subfamily Involved in Abiotic Stress Response
Cited by: 33
Author(s): Qianqian Wang, Jinyang Liu, Yu Wang, Yang Zhao, Haiyang Jiang, Beijiu Cheng
Software Mentions: 1
Published: about 11 years ago

10.3390/ijms17060930

Systematic Identification, Evolution and Expression Analysis of the Zea mays PHT1 Gene Family Reveals Several New Members Involved in Root Colonization by Arbuscular Mycorrhizal Fungi
Cited by: 92
Author(s): Fang Liu, Yang Xu, Huanhuan Jiang, Chaosheng Jiang, Yibin Du, Cheng S. Gong, Wei Wang, Suwen Zhu, Guomin Han, Beijiu Cheng
Software Mentions: 1
Published: over 10 years ago

10.3390/ijms17081211

Glutathione Transferases Superfamily: Cold-Inducible Expression of Distinct GST Genes in Brassica oleracea
Cited by: 44
Author(s): Harshavardhanan Vijayakumar, Senthil Kumar Thamilarasan, Ashokraj Shanmugam, Sathishkumar Natarajan, Hee-Jeong Jung, Jong-In Park, Hye‐Ran Kim, Mi-Young Chung, Ill–Sup Nou
Software Mentions: 1
Published: about 10 years ago

10.3390/ijms18102040

Genome-Wide Analysis of CCA1-Like Proteins in Soybean and Functional Characterization of GmMYB138a
Cited by: 16
Author(s): Shaomin Bian, Dong Jin, Ruihua Li, Xin Xie, Guangzhen Gao, Weikang Sun, Yuejia Li, Lulu Zhai, Xuyan Li
Software Mentions: 1
Published: about 9 years ago

10.3390/ijms19030769

Evolution and Stress Responses of Gossypium hirsutum SWEET Genes
Cited by: 30
Author(s): Wei Li, Zhongying Ren, Zhenyu Wang, Kuan Sun, Xinwu Pei, Yangai Liu, Kunlun He, Fei Zhang, Chengxiang Song, Xin Zhou, Wensheng Zhang, Xiongfeng Ma, Daigang Yang
Software Mentions: 1
Published: over 8 years ago

10.3390/ijms19040987

Genome-Wide Identification, Expression, and Functional Analysis of the Sugar Transporter Gene Family in Cassava (Manihot esculenta)
Cited by: 29
Author(s): Qin Liu, Dang HuiJie, Zhijian Chen, Jieying Wu, Yinhua Chen, Songbi Chen, Lijuan Luo
Software Mentions: 1
Published: over 8 years ago

10.3390/ijms19040947

Calcium-Dependent Protein Kinase Family Genes Involved in Ethylene-Induced Natural Rubber Production in Different Hevea brasiliensis Cultivars
Cited by: 11
Author(s): Liping Zhu, Xiang Jin, Quanliang Xie, Yanfei Qi, Xuchu Wang, Hongbin Li
Software Mentions: 1
Published: over 8 years ago

10.3390/ijms19051338

Genome-Wide Identification, Molecular Evolution, and Expression Profiling Analysis of Pectin Methylesterase Inhibitor Genes in Brassica campestris ssp. chinensis
Cited by: 14
Author(s): Tingting Liu, Hui Yu, Xingpeng Xiong, Xiumei Yue, Youjian Yu, Li Huang, Jiashu Cao
Software Mentions: 1
Published: over 8 years ago

10.3390/ijms19082290

Genome-Wide Identification and Analysis of Polygalacturonase Genes in Solanum lycopersicum
Cited by: 31
Author(s): Xubo Ke, Huasen Wang, Yang Li, Zhu Bao-cheng, Yunxiang Zang, Yehua He, Jiashu Cao, Zhujun Zhu, Youjian Yu
Software Mentions: 1
Published: about 8 years ago

10.3390/ijms19102936

Differentially Expressed Genes Associated with the Cabbage Yellow-Green-Leaf Mutant in the ygl-1 Mapping Interval with Recombination Suppression
Cited by: 8
Author(s): Xiaoping Li, Hailong Yu, Fengqing Han, Zhiyuan Li, Zhiyuan Fang, Limei Yang, Mu Zhuang, Honghao Lv, Yumei Liu, Zhansheng Li, Xing Li, Yangyong Zhang
Software Mentions: 1
Published: about 8 years ago

10.3390/ijms19103135

Comprehensive Analysis of Cucumber Gibberellin Oxidase Family Genes and Functional Characterization of CsGA20ox1 in Root Development in Arabidopsis
Cited by: 20
Author(s): Hong Sun, Baoya Pang, Jun Yan, Ting Wang, Lina Wang, Chunhua Chen, Qiang Li, Zhonghai Ren
Software Mentions: 1
Published: almost 8 years ago

10.1007/s13205-018-1140-3

Whole-genome resequencing and transcriptomic analysis of genes regulating anthocyanin biosynthesis in black rice plants
Cited by: 15
Author(s): Jae-Hyeon Oh, Yeji Lee, Eun-Ju Byeon, Byeong-Chul Kang, Dong-Soo Kyeoung, Chang-Kug Kim
Software Mentions: 1
Published: over 8 years ago