Ecosyste.ms: Papers

10.3389/fmicb.2020.580719

Metabolic Contributions of an Alphaproteobacterial Endosymbiont in the Apicomplexan Cardiosporidium cionae
Cited by: 8
Author(s): Elizabeth Sage Hunter, Christopher Paight, Christopher E. Lane
Software Mentions: 1
Published: almost 4 years ago

10.3389/fmicb.2017.01673

An Anthropocentric View of the Virosphere-Host Relationship
Cited by: 25
Author(s): Rodrigo Araújo Lima Rodrigues, Aron José Pazin de Andrade, Paulo Victor de Miranda Boratto, Giliane de Souza Trindade, Erna Geessien Kroon, Jônatas Santos Abrahão
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2017.01654

Environmental Bacteriophages of the Emerging Enterobacterial Phytopathogen, Dickeya solani, Show Genomic Conservation and Capacity for Horizontal Gene Transfer between Their Bacterial Hosts
Cited by: 15
Author(s): Alison M. Day, Jiyoon Ahn, Xinzhe Fang, George P. C. Salmond
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2017.01507

Genome Sequencing Reveals the Potential of Achromobacter sp. HZ01 for Bioremediation
Cited by: 38
Author(s): Yongfeng Hong, Cong-Cong Ye, Qing Zhou, Xiaoying Wu, Jianping Yuan, Juan Peng, Hailin Deng, Jiang-Hai Wang
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2018.02169

Jumbo Bacteriophages Are Represented Within an Increasing Diversity of Environmental Viruses Infecting the Emerging Phytopathogen, Dickeya solani
Cited by: 14
Author(s): Alison M. Day, Jiyoon Ahn, George P. C. Salmond
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2017.01422

SMRT Sequencing Revealed Mitogenome Characteristics and Mitogenome-Wide DNA Modification Pattern in Ophiocordyceps sinensis
Cited by: 35
Author(s): Xincong Kang, Liqin Hu, Pengyuan Shen, Rui Li, Dongbo Liu
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2016.01960

Gene Turnover Contributes to the Evolutionary Adaptation of Acidithiobacillus caldus: Insights from Comparative Genomics
Cited by: 22
Author(s): Xian Zhang, Xueduan Liu, Qiang He, Weiling Dong, Xiaoxia Zhang, Fenliang Fan, Deliang Peng, Wenkun Huang, Huaqun Yin
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2021.733631

Discovery of Novel Viruses Associated With the Invasive Cane Toad (Rhinella marina) in Its Native and Introduced Ranges
Cited by: 5
Author(s): Alice G. Russo, Emma F. Harding, Grace J. H. Yan, D. Selechnik, Simon Ducatez, Jayna L. DeVore, Jia Zhou, Roshmi Rekha Sarma, Yin Peng Lee, Mark F. Richardson, Richard Shine, Lee A. Rollins, Peter A. White
Software Mentions: 1
Published: about 3 years ago

10.3389/fmicb.2020.610395

Comparative Methylome Analysis of Campylobacter jejuni Strain YH002 Reveals a Putative Novel Motif and Diverse Epigenetic Regulations of Virulence Genes
Cited by: 3
Author(s): Sandeep Ghatak, Cheryl M. Armstrong, Sandra M. Reed, Yiping He
Software Mentions: 1
Published: almost 4 years ago

10.3389/fmicb.2021.677654

Revealing Microbiome Structure and Assembly Process in Three Rhizocompartments of Achyranthes bidentata Under Continuous Monoculture Regimes
Cited by: 3
Author(s): Juanying Wang, Hongmiao Wu, Linkun Wu, Ye Liu, Puleng Letuma, Xianjin Qin, Ting Chen, Christopher Rensing, Shan Lin, Wenxiong Lin
Software Mentions: 1
Published: over 3 years ago

10.3389/fmicb.2018.00137

The DNA Methylome of the Hyperthermoacidophilic Crenarchaeon Sulfolobus acidocaldarius
Cited by: 23
Author(s): Mohea Couturier, Ann-Christin Lindås
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2016.01756

Genome Sequence of Pseudomonas koreensis CRS05-R5, an Antagonistic Bacterium Isolated from Rice Paddy Field
Cited by: 13
Author(s): Haiyan Lin, Shikai Hu, Ruifang Liu, Ping Chen, Changwei Ge, Bo Zhu, Longbiao Guo
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2019.02194

Genomic Characterization of the Periwinkle Leaf Yellowing (PLY) Phytoplasmas in Taiwan
Cited by: 19
Author(s): Shu-Ting Cho, Chan‐Pin Lin, Chih-Horng Kuo
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2019.03129

A Resequencing-Based Ultradense Genetic Map of Hericium erinaceus for Anchoring Genome Sequences and Identifying Genetic Loci Associated With Monokaryon Growth
Cited by: 7
Author(s): Wànkuí Gǒng, Conghua Xie, Yingjun Zhou, Zuohua Zhu, Yahui Wang, Yu Peng
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmicb.2021.688981

Correlation: Between Autochthonous Microbial Diversity and Volatile Metabolites During the Fermentation of Nongxiang Daqu
Cited by: 20
Author(s): Yu-Ke Deng, Dan Huang, Bao-Lin Han, Xinqian Ning, Yu Dong, Huixiang Guo, Yufang Zou, Wen Jing, Huibo Luo
Software Mentions: 1
Published: about 3 years ago

10.3389/fmolb.2020.00187

Are Antisense Proteins in Prokaryotes Functional?
Cited by: 19
Author(s): Zachary Ardern, Klaus Neuhaus, Stephen W. Scherer
Software Mentions: 1
Published: over 4 years ago

10.3389/fnana.2020.00023

Antennal Lobe Atlas of an Emerging Corn Pest, Athetis dissimilis
Cited by: 2
Author(s): Jun-Feng Dong, Nan-Ji Jiang, Xincheng Zhao, Rui Tang
Software Mentions: 1
Published: over 4 years ago

10.3389/fneur.2021.635419

Anti-aquaporin 4 IgG Is Not Associated With Any Clinical Disease Characteristics in Neuromyelitis Optica Spectrum Disorder
Cited by: 10
Author(s): Oliver Schmetzer, Elisa Lakin, Ben Roediger, Ankelien Duchow, Susanna Asseyer, Friedemann Paul, Nadja Siebert
Software Mentions: 1
Published: over 3 years ago

10.3389/fneur.2019.01105

A Distance-Based Neurorehabilitation Evaluation Method Using Linear SVM and Resting-State fMRI
Cited by: 3
Author(s): Yunxiang Ge, Yu Pan, Qiong Wu, Wei Dou
Software Mentions: 1
Published: about 5 years ago

10.3389/fnins.2014.00325

GEMINs: potential therapeutic targets for spinal muscular atrophy?
Cited by: 14
Author(s): Rebecca Borg, Ruben J. Cauchi
Software Mentions: 1
Published: about 10 years ago

10.3389/fnins.2019.01111

Network Representations of Facial and Bodily Expressions: Evidence From Multivariate Connectivity Pattern Classification
Cited by: 3
Author(s): Yin Liang, Baolin Liu, Junzhong Ji, Xianglin Li
Software Mentions: 1
Published: about 5 years ago

10.3389/fnins.2019.01087

Effects of Chronic Sleep Restriction on the Brain Functional Network, as Revealed by Graph Theory
Cited by: 20
Author(s): Farzad V. Farahani, Magdalena Fąfrowicz, Waldemar Karwowski, Pamela K. Douglas, Aleksandra Domagalik, Ewa Beldzik, Halszka Ogińska, Tadeusz Marek
Software Mentions: 1
Published: about 5 years ago

10.3389/fnut.2021.633738

Effect of a Humanized Diet Profile on Colonization Efficiency and Gut Microbial Diversity in Human Flora-Associated Mice
Cited by: 4
Author(s): Sashuang Dong, Benhua Zeng, Ling Hu, Yuling Zhang, Jiaqi Xiong, Jing Deng, Liyan Huang, Zhenlin Liao, Jie Wang, Hong Wei, Xiang Fang
Software Mentions: 1
Published: over 3 years ago

10.3389/fonc.2014.00202

Ultra-High Density SNParray in Neuroblastoma Molecular Diagnostics
Cited by: 46
Author(s): Inge M. Ambros, C Brunner, Reza Abbasi, Christian Frech, Peter F. Ambros
Software Mentions: 1
Published: over 10 years ago

10.3389/fonc.2020.584095

DNA Copy Number Changes in Diffuse Large B Cell Lymphomas
Cited by: 8
Author(s): Luciano Cascione, Luca Aresu, Michael Baudis, Francesco Bertoni
Software Mentions: 1
Published: almost 4 years ago

10.3389/fonc.2018.00040

Live-Cell Mesothelioma Biobank to Explore Mechanisms of Tumor Progression
Cited by: 14
Author(s): Kathrin Oehl, Jelena Kresoja‐Rakic, Isabelle Opitz, Bart Vrugt, Walter Weder, Rolf A. Stahel, Peter J. Wild, Emanuela Felley‐Bosco
Software Mentions: 1
Published: over 6 years ago

10.3389/fonc.2020.609839

Whole-Exome Sequencing Reveals New Potential Mutations Genes for Primary Mucosa-Associated Lymphoid Tissue Lymphoma Arising From the Kidney
Cited by: 3
Author(s): Shuang Wen, Tianqing Liu, Hongshuo Zhang, Xu Zhou, Huidan Jin, Min Sun, Zhi-Fei Yun, Hong Luo, Ze Ni, Rui Zhao, Bo Fan
Software Mentions: 1
Published: almost 4 years ago

10.3389/fphar.2021.607200

The Species Identification in Traditional Herbal Patent Medicine, Wuhu San, Based on Shotgun Metabarcoding
Cited by: 9
Author(s): Jinxin Liu, Weishan Mu, Mengmeng Shi, Qing Zhao, Weijun Kong, Hongbo Xie, Linchun Shi
Software Mentions: 1
Published: almost 4 years ago

10.3389/fphar.2019.00272

Alcohol Extracts From Ganoderma lucidum Delay the Progress of Alzheimer’s Disease by Regulating DNA Methylation in Rodents
Cited by: 25
Author(s): Guoxiao Lai, Yinrui Guo, Diling Chen, Xiaocui Tang, Ou Shuai, Tianqiao Yong, Dongdong Wang, Chun Xiao, Gailian Zhou, Yizhen Xie, Burton B. Yang, Qingping Wu
Software Mentions: 1
Published: over 5 years ago

10.3389/fphar.2021.607210

Precise Species Detection in Traditional Herbal Patent Medicine, Qingguo Wan, Using Shotgun Metabarcoding
Cited by: 5
Author(s): Jinxin Liu, Mengmeng Shi, Qing Zhao, Weijun Kong, Weishan Mu, Hongbo Xie, Zhongsi Li, Baoli Li, Linchun Shi
Software Mentions: 1
Published: over 3 years ago

10.3389/fphar.2021.607197

Biological Ingredient Analysis of Traditional Herbal Patent Medicine Fuke Desheng Wan Using the Shotgun Metabarcoding Approach
Cited by: 4
Author(s): Hongbo Xie, Qing Zhao, Mengmeng Shi, Weijun Kong, Weishan Mu, Baoli Li, Jingyi Zhao, Chunli Zhao, Jing Jia, Jinxin Liu, Linchun Shi
Software Mentions: 1
Published: over 3 years ago

10.3389/fphys.2020.577237

Acacetin Ameliorates Experimental Colitis in Mice via Inhibiting Macrophage Inflammatory Response and Regulating the Composition of Gut Microbiota
Cited by: 26
Author(s): Junyu Ren, Bei Yue, Hao Wang, Beibei Zhang, Xiaoping Li, Zhilun Yu, Jing Zhang, Yueping Ren, Sridhar Mani, Zhengtao Wang, Wei Dou
Software Mentions: 1
Published: almost 4 years ago

10.3389/fphys.2017.00261

Integrated Analysis of DNA Methylation and mRNA Expression Profiles to Identify Key Genes in Severe Oligozoospermia
Cited by: 18
Author(s): Zhiming Li, Xuan Zhuang, Jinxiong Zeng, Chi-Meng Tzeng
Software Mentions: 1
Published: over 7 years ago

10.3389/fpls.2021.655267

Characterization of Japanese Plum (Prunus salicina) PsMYB10 Alleles Reveals Structural Variation and Polymorphisms Correlating With Fruit Skin Color
Cited by: 13
Author(s): Arnau Fiol, Beatriz Ester García-Gómez, Federico Jurado-Ruiz, Konstantinos G. Alexiou, Werner Howad, María José Aranzana
Software Mentions: 1
Published: over 3 years ago

10.3389/fpls.2013.00176

Gene divergence of homeologous regions associated with a major seed protein content QTL in soybean
Cited by: 21
Author(s): Puji Lestari, Kyujung Van, Jay Ern Lee, Yang Jae Kang, Suk-Ha Lee
Software Mentions: 1
Published: almost 12 years ago

10.3389/fpls.2020.554158

Postharvest Properties of Ultra-Late Maturing Peach Cultivars and Their Attributions to Melting Flesh (M) Locus: Re-evaluation of M Locus in Association With Flesh Texture
Cited by: 3
Author(s): Ryohei Nakano, Takashi Kawai, Yosuke Fukamatsu, Kagari Akita, Shuichi Watanabe, Takeshi Asano, Daisuke Takata, Mamoru Sato, Fumio Fukuda, Koichiro Ushijima
Software Mentions: 1
Published: almost 4 years ago

10.3389/fpls.2018.00013

Parental Expression Variation of Small RNAs Is Negatively Correlated with Grain Yield Heterosis in a Maize Breeding Population
Cited by: 17
Author(s): Felix Seifert, Alexander Thiemann, Robert Grant-Downton, Susanne Edelmann, Dominika Rybka, Tobias A. Schrag, Matthias Frisch, H. G. Dickinson, Albrecht E. Melchinger, Stefan Scholten
Software Mentions: 1
Published: almost 7 years ago

10.3389/fpls.2021.650109

Identification, Expression, and Interaction Analysis of Ovate Family Proteins in Populus trichocarpa Reveals a Role of PtOFP1 Regulating Drought Stress Response
Cited by: 1
Author(s): Hemeng Wang, Jin‐Gui Chen, Ying Chang
Software Mentions: 1
Published: over 3 years ago

10.3389/fpls.2021.719889

Identification and Analysis of GhEXO Gene Family Indicated That GhEXO7_At Promotes Plant Growth and Development Through Brassinosteroid Signaling in Cotton (Gossypium hirsutum L.)
Cited by: 4
Author(s): Shengdong Li, Zhao Liu, Guoquan Chen, Ghulam Qanmber, Lili Lu, Jiaxin Zhang, Shuya Ma, Zuoren Yang, Fuguang Li
Software Mentions: 1
Published: about 3 years ago

10.3389/fpls.2017.00349

Genome-Wide Identification, Evolution, and Expression Analysis of the ATP-Binding Cassette Transporter Gene Family in Brassica rapa
Cited by: 29
Author(s): Chao Yan, Weike Duan, Shanwu Lyu, Ying Liu, Xilin Hou
Software Mentions: 1
Published: over 7 years ago

10.3389/fpls.2020.536530

Identification of Candidate Auxin Response Factors Involved in Pomegranate Seed Coat Development
Cited by: 3
Author(s): Liang Yu, Chunyan Liu, Jiyu Li, Botao Jia, Xiaoxiao Qi, Ray Ming, Gaihua Qin
Software Mentions: 1
Published: about 4 years ago

10.3389/fpls.2021.692628

High-Density Linkage Map Construction and QTL Identification in a Diploid Blueberry Mapping Population
Cited by: 14
Author(s): Xinpeng Qi, Elizabeth L. Ogden, Hamed Bostan, Daniel J. Sargent, J. A. Ward, Jessica Gilbert, Massimo Iorizzo, Lisa J. Rowland
Software Mentions: 1
Published: over 3 years ago

10.3389/fpls.2016.01600

DArT Markers Effectively Target Gene Space in the Rye Genome
Cited by: 22
Author(s): Piotr Gawroński, Magdalena Pawełkowicz, Katarzyna Tofil, Grzegorz Uszyński, Saida Sharifova, Shivaksh Ahluwalia, Mirosław Tyrka, Maria Wędzony, Andrzej Kilian, Hanna Bolibok-Brągoszewska
Software Mentions: 1
Published: about 8 years ago

10.3389/fpls.2021.608603

Characterization of Mungbean CONSTANS-LIKE Genes and Functional Analysis of CONSTANS-LIKE 2 in the Regulation of Flowering Time in Arabidopsis
Cited by: 12
Author(s): Chenyang Liu, Qianqian Zhang, Hong Zhu, Chunmei Cai, Shuai Li
Software Mentions: 1
Published: almost 4 years ago

10.3389/fpls.2015.00162

Employing genome-wide SNP discovery and genotyping strategy to extrapolate the natural allelic diversity and domestication patterns in chickpea
Cited by: 91
Author(s): Alice Kujur, Deepak Bajaj, Hari D. Upadhyaya, Shouvik Das, Rajeev Ranjan, Tanima Shree, Maneesha S. Saxena, Saurabh Badoni, Vinod Kumar, Shailesh Tripathi, C L L Gowda, Sunny Sharma, Sube Singh, Akhilesh K. Tyagi, Swarup K. Parida
Software Mentions: 1
Published: over 9 years ago

10.3389/fpls.2017.00162

Comprehensive Analysis of the CDPK-SnRK Superfamily Genes in Chinese Cabbage and Its Evolutionary Implications in Plants
Cited by: 21
Author(s): Peng Wu, Wenli Wang, Weike Duan, Ying Li, Xilin Hou
Software Mentions: 1
Published: almost 8 years ago

10.3389/fpls.2014.00098

The genome sequence and effector complement of the flax rust pathogen Melampsora lini
Cited by: 104
Author(s): Adnane Nemri, Diane G. O. Saunders, Claire L. Anderson, Narayana M. Upadhyaya, Joe Win, Gregory J. Lawrence, David A. Jones, Sophien Kamoun, Jeffrey G. Ellis, Peter N. Dodds
Software Mentions: 1
Published: over 10 years ago

10.3389/fpls.2019.00592

Comparison Between Flat and Round Peaches, Genomic Evidences of Heterozygosity Events
Cited by: 12
Author(s): Qiuping Tan, Xiao Liu, Hongjiang Gao, Wei Xiao, Xiude Chen, Xiling Fu, Ling Li, Dongmei Li, Dongsheng Gao
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2016.01820

Characterization and Functional Analysis of Calmodulin and Calmodulin-Like Genes in Fragaria vesca
Cited by: 26
Author(s): Kai Zhang, Dingyi Yue, Wei Wei, Huanming Yang, Jiahao Feng, Zhirong Zou
Software Mentions: 1
Published: almost 8 years ago

10.3389/fpls.2020.00128

Genome-Wide Identification of the MdKNOX Gene Family and Characterization of Its Transcriptional Regulation in Malus domestica
Cited by: 21
Author(s): Peng Jia, Chenguang Zhang, Libo Xing, Youmei Li, Kamran Shah, Xia Zuo, Dong Zhang, Na An, Mingyu Han, Xiaolin Ren
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2020.01076

Illegitimate Recombination Between Homeologous Genes in Wheat Genome
Cited by: 9
Author(s): Chao Liu, Jinpeng Wang, Pengchuan Sun, Jigao Yu, Fanbo Meng, Zhikang Zhang, He Guo, Chendan Wei, Xinyu Li, Shaoqi Shen, Xiyin Wang
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2021.639431

Mapping and Analysis of a Novel Genic Male Sterility Gene in Watermelon (Citrullus lanatus)
Cited by: 5
Author(s): Wei Dong, Dewei Wu, Yan Chen, Defeng Wu
Software Mentions: 1
Published: about 3 years ago

10.3389/fpls.2016.01938

The tRNA-Derived Small RNAs Regulate Gene Expression through Triggering Sequence-Specific Degradation of Target Transcripts in the Oomycete Pathogen Phytophthora sojae
Cited by: 33
Author(s): Qinhu Wang, Tingting Li, Ke Xu, Wei Zhang, Xiaolong Wang, Junli Quan, Weibo Jin, Meixiang Zhang, Guangjin Fan, Ming-Bo Wang, Weixing Shan
Software Mentions: 1
Published: almost 8 years ago

10.3389/fpls.2016.00980

Genetic Linkage Map Construction and QTL Analysis of Two Interspecific Reproductive Isolation Traits in Sponge Gourd
Cited by: 18
Author(s): Haibin Wu, Xiaoli He, Hao Gong, Shuhong Luo, Mingzhu Li, Junqiu Chen, Changyuan Zhang, Ting Yu, Weiqiang Huang, Jianxun Luo
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2018.00856

Comparative Genomics, Whole-Genome Re-sequencing and Expression Profile Analysis of Nucleobase:Cation Symporter 2 (NCS2) Genes in Maize
Cited by: 5
Author(s): Wenxiang Chai, Xiaojian Peng, Bin Liu, Jing Wang, Zhan Zhi-Ming, Yin Liu, Kai Zhao, Beijiu Cheng, Weina Si, Haiyang Jiang
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2018.00047

Asymmetric Evolution and Expansion of the NAC Transcription Factor in Polyploidized Cotton
Cited by: 21
Author(s): Kai Fan, Feng Li, Jiahuan Chen, Zhaowei Li, Weiwei Lin, Size Cai, Jianping Liu
Software Mentions: 1
Published: almost 7 years ago

10.3389/fpls.2015.00736

Identification, isolation, and expression analysis of heat shock transcription factors in the diploid woodland strawberry Fragaria vesca
Cited by: 46
Author(s): Huanming Yang, Yujun Han, Wei Wei, Yajuan Li, Kai Zhang, Yurong Gao, Fengli Zhao, Jiahao Feng
Software Mentions: 1
Published: about 9 years ago

10.3389/fpls.2019.00513

Whole Genome Sequencing and Comparative Genomic Analysis Reveal Allelic Variations Unique to a Purple Colored Rice Landrace (Oryza sativa ssp. indica cv. Purpleputtu)
Cited by: 21
Author(s): V. B. Reddy Lachagari, Ravi Gupta, Sivarama Prasad Lekkala, Lakshmi Mahadevan, Boney Kuriakose, Navajeet Chakravartty, A. V. S. K. Mohan Katta, Sam Santhosh, A. R. Reddy, George Thomas
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2019.00711

Genetic Analysis and Transfer of Favorable Exotic QTL Alleles for Grain Yield Across D Genome Using Two Advanced Backcross Wheat Populations
Cited by: 5
Author(s): Ali Ahmad Naz, Said Dadshani, Agim Ballvora, Klaus Pillen, Jens Léon
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2021.618984

Genome-Wide Identification and Low Temperature Responsive Pattern of Actin Depolymerizing Factor (ADF) Gene Family in Wheat (Triticum aestivum L.)
Cited by: 8
Author(s): Ke Xu, Yong Zhao, Sihang Zhao, Haodong Liu, Weiwei Wang, Shuhua Zhang, Xueju Yang
Software Mentions: 1
Published: over 3 years ago

10.3389/fpls.2019.00034

Development of Stable Homozygous Wheat/Amblyopyrum muticum (Aegilops mutica) Introgression Lines and Their Cytogenetic and Molecular Characterization
Cited by: 18
Author(s): Julie King, Claire L. Newell, Surbhi Grewal, Stella Hubbart‐Edwards, Caiyun Yang, Duncan Scholefield, Stephen Ashling, Alex Stride, I. P. King
Software Mentions: 1
Published: almost 6 years ago

10.3389/fpls.2017.01470

Development of Highly Informative Genome-Wide Single Sequence Repeat Markers for Breeding Applications in Sesame and Construction of a Web Resource: SisatBase
Cited by: 27
Author(s): Komivi Dossa, Jingyin Yu, Boshou Liao, Ndiaga Cissé
Software Mentions: 1
Published: over 7 years ago

10.3389/fpls.2014.00537

Flowering time control in European winter wheat
Cited by: 109
Author(s): Simon Langer, C. Friedrich H. Longin, Tobias Würschum
Software Mentions: 1
Published: about 10 years ago

10.3389/fpls.2020.580050

Genome-Wide Identification of lncRNAs Involved in Fertility Transition in the Photo-Thermosensitive Genic Male Sterile Rice Line Wuxiang S
Cited by: 10
Author(s): Ying Wang, Hongyuan Zhang, Qian Li, Jing Jin, Hao Chen, Yu Zeng, Xingguo Huang, Yi Ding
Software Mentions: 1
Published: almost 4 years ago

10.3389/fpls.2016.01362

A High-Resolution InDel (Insertion–Deletion) Markers-Anchored Consensus Genetic Map Identifies Major QTLs Governing Pod Number and Seed Yield in Chickpea
Cited by: 16
Author(s): Ram Srivastava, Mohar Singh, Deepak Bajaj, Swarup K. Parida
Software Mentions: 1
Published: about 8 years ago

10.3389/fpls.2012.00297

Inferring the Brassica rapa Interactome Using Protein–Protein Interaction Data from Arabidopsis thaliana
Cited by: 16
Author(s): Jianhua Yang, Kim Osman, Mudassar Iqbal, Dov J. Stekel, Zewei Luo, Susan J. Armstrong, F. Christopher H. Franklin
Software Mentions: 1
Published: almost 12 years ago

10.3389/fpls.2021.697609

Analysis of Evolution, Expression and Genetic Transformation of TCP Transcription Factors in Blueberry Reveal That VcTCP18 Negatively Regulates the Release of Flower Bud Dormancy
Cited by: 9
Author(s): Yongqiang Li, Shuang An, Cheng Qian, Yu Zong, Wenrong Chen, Weidong Guo, Lu Zhang
Software Mentions: 1
Published: over 3 years ago

10.3389/fpls.2016.01361

Characterization of CIPK Family in Asian Pear (Pyrus bretschneideri Rehd) and Co-expression Analysis Related to Salt and Osmotic Stress Responses
Cited by: 24
Author(s): Jun Tang, Jing Lin, Hui Li, Yong Li, Qiyun Yang, Zong‐Ming Cheng, Chang YouHong
Software Mentions: 1
Published: about 8 years ago

10.3389/fpls.2017.00397

Genomic, Molecular Evolution, and Expression Analysis of Genes Encoding Putative Classical AGPs, Lysine-Rich AGPs, and AG Peptides in Brassica rapa
Cited by: 8
Author(s): Tianyu Han, Heng Dong, Jie Cui, Ming Li, Sue Lin, Jiashu Cao, Li Huang
Software Mentions: 1
Published: over 7 years ago

10.3389/fpls.2016.00376

Evolutionary and Expression Analyses of the Apple Basic Leucine Zipper Transcription Factor Family
Cited by: 51
Author(s): Jiao Zhao, Rongrong Guo, Chunfang Guo, Hongmin Hou, Xiping Wang, Hua Gao
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2016.00577

MYB Transcription Factors in Chinese Pear (Pyrus bretschneideri Rehd.): Genome-Wide Identification, Classification, and Expression Profiling during Fruit Development
Cited by: 95
Author(s): Yunpeng Cao, Yuepeng Han, Dahui Li, Yi Lin, Yongping Cai
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2018.00266

Optimized Method of Extracting Rice Chloroplast DNA for High-Quality Plastome Resequencing and de Novo Assembly
Cited by: 19
Author(s): Takeshi Takamatsu, Marouane Baslam, Takuya Inomata, Kazusato Oikawa, Kazuyoshi Itoh, Takayuki Ohnishi, Tetsu Kinoshita, Toshiaki Mitsui
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2018.01161

A High-Density Genetic Map of an Allohexaploid Brassica Doubled Haploid Population Reveals Quantitative Trait Loci for Pollen Viability and Fertility
Cited by: 14
Author(s): Su Yang, Sheng Chen, Kangni Zhang, Lan Li, Yafang Yin, Rafaqat Ali Gill, Guijun Yan, Jinling Meng, Wallace Cowling, Weijun Zhou
Software Mentions: 1
Published: about 6 years ago

10.3389/fpls.2020.00238

Characterization of the Tomato (Solanum lycopersicum) Pectin Methylesterases: Evolution, Activity of Isoforms and Expression During Fruit Ripening
Cited by: 18
Author(s): Bin Wen, Feng Zhang, Xilin Wu, Huan Li
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2016.01349

The Tomato Spotted Wilt Virus Genome Is Processed Differentially in its Plant Host Arachis hypogaea and its Thrips Vector Frankliniella fusca
Cited by: 15
Author(s): Stephen J. Fletcher, Anita Shrestha, Jonathan R. Peters, Bernard J. Carroll, Rajagopalbabu Srinivasan, H. R. Pappu, Neena Mitter
Software Mentions: 1
Published: about 8 years ago

10.3389/fpls.2014.00676

Genetic mapping of legume orthologs reveals high conservation of synteny between lentil species and the sequenced genomes of Medicago and chickpea
Cited by: 32
Author(s): Neha Gujaria-Verma, Sally Vail, Noelia Carrasquilla‐Garcia, R. Varma Penmetsa, Douglas R. Cook, Andrew Farmer, Albert Vandenberg, Kirstin E. Bett
Software Mentions: 1
Published: almost 10 years ago

10.3389/fpls.2017.00106

Genome-Wide Dissection of the Heat Shock Transcription Factor Family Genes in Arachis
Cited by: 27
Author(s): Pengfei Wang, Hui Song, Changsheng Li, Pengcheng Li, Aiqin Li, Hongshan Guan, Lei Hou, Xingjun Wang
Software Mentions: 1
Published: almost 8 years ago

10.3389/fpls.2016.01169

Identification of Sesame Genomic Variations from Genome Comparison of Landrace and Variety
Cited by: 41
Author(s): Xin Wei, Xiaodong Zhu, Jingyin Yu, Linhai Wang, Yanxin Zhang, Donghua Li, Rong Zhou, Xiurong Zhang
Software Mentions: 1
Published: over 8 years ago

10.3389/fpls.2020.532211

Genomic Characterization of the Japanese Indigenous Wine Grape Vitis sp. cv. Koshu
Cited by: 4
Author(s): Keisuke Tanaka, Yu Hamaguchi, Shunji Suzuki, Shinichi Enoki
Software Mentions: 1
Published: about 4 years ago

10.3389/fpls.2018.00021

Genomic Sequencing of Japanese Plum (Prunus salicina Lindl.) Mutants Provides a New Model for Rosaceae Fruit Ripening Studies
Cited by: 18
Author(s): Angel V. Fernández i Martí, Christopher Saski, George A. Manganaris, Ksenija Gašić, Carlos H. Crisosto
Software Mentions: 1
Published: almost 7 years ago

10.3389/fpls.2015.00879

Molecular evolution, characterization, and expression analysis of SnRK2 gene family in Pak-choi (Brassica rapa ssp. chinensis)
Cited by: 19
Author(s): Zhinan Huang, Jun Tang, Weike Duan, Zhen Wang, Xiaoming Song, Xilin Hou
Software Mentions: 1
Published: about 9 years ago

10.3389/fpls.2021.644597

Bacillus circulans GN03 Alters the Microbiota, Promotes Cotton Seedling Growth and Disease Resistance, and Increases the Expression of Phytohormone Synthesis and Disease Resistance-Related Genes
Cited by: 9
Author(s): Lijun Qin, Peidong Tian, Qunyao Cui, Shuping Hu, Wei Ji, Chengjian Xie, Xianlin Yang, Hong Shen
Software Mentions: 1
Published: over 3 years ago

10.3389/fpls.2020.579255

Identification of CCCH Zinc Finger Proteins Family in Moso Bamboo (Phyllostachys edulis), and PeC3H74 Confers Drought Tolerance to Transgenic Plants
Cited by: 13
Author(s): Feng Chen, Huan-Long Liu, Kang Wang, Yameng Gao, Min Wu, Yan Xiang
Software Mentions: 1
Published: about 4 years ago

10.3389/fpls.2021.702160

Genome-Wide Analysis of the R2R3-MYB Gene Family in Fragaria × ananassa and Its Function Identification During Anthocyanins Biosynthesis in Pink-Flowered Strawberry
Cited by: 15
Author(s): Jiaxin Liu, Jian Wang, Mingqian Wang, Jun Zhao, Yanan Zheng, Tian Zhang, Liyan Xue, Jiajun Li
Software Mentions: 1
Published: about 3 years ago

10.3389/fpls.2018.00604

Genome Sequencing and Analysis of the Peanut B-Genome Progenitor (Arachis ipaensis)
Cited by: 31
Author(s): Qing Lu, Haifen Li, Yanbin Hong, Guo‐Qiang Zhang, Shaoqing Wen, Xingyu Li, Zhou Guiyuan, Shaoxiong Li, Hao Líu, Haiyan Liu, Zhong‐Jian Liu, Rajeev K. Varshney, Xiaoping Chen, Xuanqiang Liang
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2020.563452

Genetic Diversity, Pedigree Relationships, and A Haplotype-Based DNA Fingerprinting System of Red Bayberry Cultivars
Cited by: 5
Author(s): Bo Wu, Yun Zhong, Qianqian Wu, Fangyong Chen, Guoqiang Zhong, Yiping Cui
Software Mentions: 1
Published: about 4 years ago

10.3389/fpls.2017.01544

A High Density Genetic Map Derived from RAD Sequencing and Its Application in QTL Analysis of Yield-Related Traits in Vigna unguiculata
Cited by: 25
Author(s): Lei Pan, Nian Wang, Zhihua Wu, R.T. Guo, Xiaolu Yu, Yu Zheng, Qiuju Xia, Songtao Gui, Chen Chanyou
Software Mentions: 1
Published: about 7 years ago

10.3389/fpsyt.2021.651536

Gut Microbiome: A Potential Indicator for Differential Diagnosis of Major Depressive Disorder and General Anxiety Disorder
Cited by: 23
Author(s): Zaiquan Dong, Xiaoling Shen, Yanbin Hao, Jin Li, Haoran Li, Haitao Xu, Yin Li, Weihong Kuang
Software Mentions: 1
Published: about 3 years ago

10.3389/fpubh.2020.00092

Prevalence of Antibiotic Resistome in Ready-to-Eat Salad
Cited by: 22
Author(s): Shu‐Yi‐Dan Zhou, Meng-Yun Wei, Madeline Giles, Roy Neilson, Fei Zheng, Qi Zhang, Yong‐Guan Zhu, Xiao‐Ru Yang
Software Mentions: 1
Published: over 4 years ago

10.3389/fvets.2021.622725

Insight Into the Virulence Related Secretion Systems, Fimbriae, and Toxins in O2:K1 Escherichia coli Isolated From Bovine Mastitis
Cited by: 3
Author(s): Min Sun, Xing Gao, Kejie Zhao, Jiale Ma, Huochun Yao, Zihao Pan
Software Mentions: 1
Published: almost 4 years ago

10.1534/g3.113.006288

Targeted Sequence Capture Provides Insight into Genome Structure and Genetics of Male Sterility in a Gynodioecious Diploid Strawberry,<i>Fragaria vesca</i>ssp.<i>bracteata</i>(Rosaceae)
Cited by: 55
Author(s): Jacob A. Tennessen, Rajanikanth Govindarajulu, Aaron Liston, Tia Lynn Ashman
Software Mentions: 1
Published: over 11 years ago

10.1534/g3.114.012989

Adult Plant Development in Triticale (× <i>Triticosecale</i> Wittmack) Is Controlled by Dynamic Genetic Patterns of Regulation
Cited by: 16
Author(s): Tobias Würschum, Wenxin Liu, Katharina V. Alheit, Matthew R. Tucker, Manje Gowda, Elmar A. Weissmann, Volker Hahn, Hans Peter Maurer
Software Mentions: 1
Published: about 10 years ago

10.1534/g3.114.013623

Crossability of<i>Triticum urartu</i>and<i>Triticum monococcum</i>Wheats, Homoeologous Recombination, and Description of a Panel of Interspecific Introgression Lines
Cited by: 21
Author(s): Agostino Fricano, Andrea Brandolini, Laura Rossini, Pierre Sourdille, Jörg Wunder, Sigi Effgen, Alyssa Hidalgo, Daniela Erba, Pietro Piffanelli, F. Salamini
Software Mentions: 1
Published: about 10 years ago

10.1534/g3.114.015438

A High-Density Linkage Map for <i>Astyanax mexicanus</i> Using Genotyping-by-Sequencing Technology
Cited by: 28
Author(s): Brian M. Carlson, Samuel W. Onusko, Joshua B. Gross
Software Mentions: 1
Published: almost 10 years ago

10.1534/g3.115.017772

Composite Selection Signals for Complex Traits Exemplified Through Bovine Stature Using Multibreed Cohorts of European and African <i>Bos taurus</i>
Cited by: 37
Author(s): Imtiaz A. S. Randhawa, Mehar S. Khatkar, Peter Thomson, Herman W. Raadsma
Software Mentions: 1
Published: over 9 years ago

10.1534/g3.115.023432

Exploring a Nonmodel Teleost Genome Through RAD Sequencing—Linkage Mapping in Common Pandora, <i>Pagellus erythrinus</i> and Comparative Genomic Analysis
Cited by: 30
Author(s): Tereza Manousaki, Alexandros Tsakogiannis, John B. Taggart, Christos Palaiokostas, Dimitris Tsaparis, Jacques Lagnel, Dimitrios Chatziplis, Antoniοs Magoulas, Nikos Papandroulakis, Constantinos C. Mylonas, Costas S. Tsigenopoulos
Software Mentions: 1
Published: over 8 years ago

10.1534/g3.116.028175

Comparative and Transcriptome Analyses Uncover Key Aspects of Coding- and Long Noncoding RNAs in Flatworm Mitochondrial Genomes
Cited by: 26
Author(s): E. J. Ross, David Blair, Carlos Guerrero‐Hernández, Alejandro Sánchez Alvarado
Software Mentions: 1
Published: over 8 years ago

10.1534/g3.117.041376

A High-Density Genetic Linkage Map and QTL Fine Mapping for Body Weight in Crucian Carp (<i>Carassius auratus</i>) Using 2b-RAD Sequencing
Cited by: 30
Author(s): Haiyang Liu, Bishi Fu, Maolin Pang, Xiu Feng, Xin Yu, Jingou Tong
Software Mentions: 1
Published: over 7 years ago

10.1534/g3.117.300243

Genome-Wide Analysis of DNA Methylation During Ovule Development of Female-Sterile Rice <i>fsv1</i>
Cited by: 12
Author(s): Helian Liu, Ya Fang Wu, Aqin Cao, Bigang Mao, Baisuo Zhao, Jianbo Wang
Software Mentions: 1
Published: about 7 years ago

10.1534/g3.118.200232

Genome-Wide Analysis of Multidrug and Toxic Compound Extrusion (<i>MATE</i>) Family in <i>Gossypium raimondii</i> and <i>Gossypium arboreum</i> and Its Expression Analysis Under Salt, Cadmium, and Drought Stress
Cited by: 34
Author(s): Lei Pu, Richard Odongo Magwanga, Xuewu Guo, Joy Nyangasi Kirungu, Hejun Lu, Xiaoyan Cai, Zhongli Zhou, Yangyang Wei, Xingxing Wang, Zhenmei Zhang, Renhai Peng, Kunbo Wang, Fang Liu
Software Mentions: 1
Published: over 6 years ago