Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: Chorus
https://packages.ecosyste.ms/registries/pypi.org/packages/Chorus
Simple chemical structure modeling toolkit
6 versions
Latest release: over 6 years ago
33 downloads last month
Papers Mentioning Chorus 26
10.1186/s40246-015-0050-2
A survey of computational tools for downstream analysis of proteomic and other omic datasetsCited by: 17
Author(s): Anis Karimpour-Fard, L. Elaine Epperson, Lawrence Hunter
Software Mentions: 7
Published: about 9 years ago
10.3390/s20020569
Crowd of Oz: A Crowd-Powered Social Robotics System for Stress ManagementCited by: 18
Author(s): Tahir Abbas, Vassilis-Javed Khan, Ujwal Gadiraju, Emilia Barakova, Panos Markopoulos
Software Mentions: 5
Published: almost 5 years ago
10.3390/ijms22137124
Single Copy Oligonucleotide Fluorescence In Situ Hybridization Probe Design Platforms: Development, Application and EvaluationCited by: 9
Author(s): Guanqing Liu, Tao Zhang
Software Mentions: 3
Published: over 3 years ago
10.1002/pmic.201400302
Making proteomics data accessible and reusable: Current state of proteomics databases and repositoriesCited by: 165
Author(s): Yasset Perez‐Riverol, Emanuele Alpi, Rui Wang, Henning Hermjakob, Juan Antonio Vizcaíno
Software Mentions: 3
Published: over 9 years ago
10.18632/aging.101810
Measuring biological age in mice using differential mass spectrometryCited by: 7
Author(s): Harris Bell-Temin, Matthew J. Yousefzadeh, Andrey Bondarenko, Ellen Quarles, Jacqueline Jones-Laughner, Paul D. Robbins, Warren Ladiges, Laura J. Niedernhofer, Nathan A. Yates
Software Mentions: 2
Published: almost 6 years ago
10.1111/acel.12472
Mitochondrial‐targeted catalase is good for the old mouse proteome, but not for the young: ‘reverse’ antagonistic pleiotropy?Cited by: 31
Author(s): Nathan Basisty, Dao Fu Dai, Arni Gagnidze, Lemuel Gitari, Jeanne Fredrickson, Yvonne Maina, Richard P. Beyer, Mary J. Emond, Edward J. Hsieh, Michael J. MacCoss, George M. Martin, Peter S. Rabinovitch
Software Mentions: 2
Published: over 8 years ago
10.1371/journal.pone.0080207
Global Phosphotyrosine Proteomics Identifies PKCδ as a Marker of Responsiveness to Src Inhibition in Colorectal CancerCited by: 15
Author(s): Eliot T. McKinley, Huiling Liu, W. Hayes McDonald, Weifeng Luo, Ping Zhao, Robert J. Coffey, Steven K. Hanks, H. Charles Manning
Software Mentions: 2
Published: about 11 years ago
10.2196/14115
A Novel Mobile Tool (Somatomap) to Assess Body Image Perception Pilot Tested With Fashion Models and Nonmodels: Cross-Sectional StudyCited by: 18
Author(s): Christina Ralph‐Nearman, Armen C. Arevian, Maria Puhl, Rajay Kumar, Diane Villaroman, Nanthia Suthana, Jamie D. Feusner, Sahib S. Khalsa
Software Mentions: 2
Published: about 5 years ago
10.3390/ijerph17030864
The Story of Goldilocks and Three Twitter’s APIs: A Pilot Study on Twitter Data Sources and DisclosureCited by: 12
Author(s): Yoonsang Kim, Rachel Nordgren, Sherry Emery
Software Mentions: 2
Published: almost 5 years ago
10.3389/fpls.2021.731664
Chromosome Painting Provides Insights Into the Genome Structure and Evolution of SugarcaneCited by: 13
Author(s): Zhen Meng, Qinnan Wang, Haris Khurshid, Ghulam Raza, Jinlei Han, Baohua Wang, Kai Wang
Software Mentions: 1
Published: about 3 years ago
10.3389/fpls.2018.01624
Comprehensively Characterizing the Cytological Features of Saccharum spontaneum by the Development of a Complete Set of Chromosome-Specific Oligo ProbesCited by: 35
Author(s): Zhen Meng, Zhiliang Zhang, Tianying Yan, Qingfang Lin, Yu Wang, Weiyuan Huang, Yongji Huang, Zhanjie Li, Qingyi Yu, Jianping Wang, Kai Wang
Software Mentions: 1
Published: about 6 years ago
10.3389/fpls.2019.01503
Chromosome Painting Facilitates Anchoring Reference Genome Sequence to Chromosomes In Situ and Integrated Karyotyping in Banana (Musa Spp.)Cited by: 47
Author(s): Denisa Šimoníková, Alžbeěta Němečková, Miroslava Karafiátová, Brigitte Uwimana, Rony Swennen, Jaroslav Doležel, Eva Hřibová
Software Mentions: 1
Published: about 5 years ago
10.3389/fpsyt.2018.00444
Interoceptive Anxiety and Body Representation in Anorexia NervosaCited by: 37
Author(s): Sahib S. Khalsa, Mahlega S. Hassanpour, Michael Strober, Michelle G. Craske, Armen C. Arevian, Jamie D. Feusner
Software Mentions: 1
Published: about 6 years ago
10.3390/genes11121489
The Puzzling Fate of a Lupin Chromosome Revealed by Reciprocal Oligo-FISH and BAC-FISH MappingCited by: 8
Author(s): Wojciech Bielski, Michał Książkiewicz, Denisa Šimoníková, Eva Hřibová, Karolina Susek, B. Naganowska
Software Mentions: 1
Published: almost 4 years ago
10.1073/pnas.2013776118
Macrophages inhibit and enhance endometriosis depending on their originCited by: 48
Author(s): Chloe Hogg, Kavita Panir, Priya Dhami, Matthew Rosser, Matthias Mack, Daniel Soong, Jeffrey W. Pollard, Stephen J. Jenkins, Andrew W Horne, Erin Greaves
Software Mentions: 1
Published: almost 4 years ago
10.1371/journal.pone.0208309
Accommodating exogenous variable and decision rule heterogeneity in discrete choice models: Application to bicyclist route choiceCited by: 11
Author(s): Bibhas Kumar Dey, Sabreena Anowar, Naveen Eluru, Marianne Hatzopoulou
Software Mentions: 1
Published: almost 6 years ago
10.1038/s41598-017-15838-z
Patterns of biophonic periodicity on coral reefs in the Great Barrier ReefCited by: 23
Author(s): Jamie N. McWilliam, Robert D. McCauley, Christine Erbe, Miles Parsons
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-021-90739-w
Visual mapping of body image disturbance in anorexia nervosa reveals objective markers of illness severityCited by: 12
Author(s): Christina Ralph‐Nearman, Armen C. Arevian, Scott E. Moseman, Megan Sinik, Sheridan Chappelle, Jamie D. Feusner, Sahib S. Khalsa
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pone.0225695
Clinical state tracking in serious mental illness through computational analysis of speechCited by: 40
Author(s): Armen C. Arevian, Daniel Bone, Nikolaos Malandrakis, Víctor R. Martínez, Kenneth B. Wells, David J. Miklowitz, Shrikanth Narayanan
Software Mentions: 1
Published: almost 5 years ago
10.3390/pathogens9121075
Validation of a Novel Commercial ELISA Test for the Detection of Antibodies against Coxiella burnetiiCited by: 0
Author(s): Salvatore Ledda, Cinzia Santucciu, Valentina Chisu, Giovanna Masala
Software Mentions: 1
Published: almost 4 years ago
10.2196/12655
Patient and Provider Cocreation of Mobile Texting Apps to Support Behavioral Health: Usability StudyCited by: 10
Author(s): Armen C. Arevian, Jennifer O’Hora, James C. Rosser, Joseph Mango, David J. Miklowitz, Kenneth B. Wells
Software Mentions: 1
Published: over 4 years ago
10.2196/12358
A Clinical Care Monitoring and Data Collection Tool (H3 Tracker) to Assess Uptake and Engagement in Mental Health Care Services in a Community-Based Pediatric Integrated Care Model: Longitudinal Cohort StudyCited by: 4
Author(s): Michael McCreary, Armen C. Arevian, Madeline Brady, Ana E Mosqueda Chichits, Lily Zhang, Lingqi Tang, Bonnie T. Zima
Software Mentions: 1
Published: over 5 years ago
10.3390/ijerph15081683
Community Resilience Learning Collaborative and Research Network (C-LEARN): Study Protocol with Participatory Planning for a Randomized, Comparative Effectiveness TrialCited by: 15
Author(s): Benjamin Springgate, Armen C. Arevian, Ashley Wennerstrom, Arthur J. Johnson, David Eisenman, Olivia K. Sugarman, Catherine Haywood, Edward Trapido, Cathy D. Sherbourne, Ashley Everett, Michael McCreary, Diana Meyers, Sheryl H. Kataoka, Lingqi Tang, Jennifer Sato, Kenneth B. Wells
Software Mentions: 1
Published: over 6 years ago
10.1186/s12870-018-1325-2
Chromosome painting and its applications in cultivated and wild riceCited by: 39
Author(s): Lili Hou, Meng Xu, Zhang Tao, Zhihao Xu, Weiyun Wang, Jianxiang Zhang, Meimei Yu, Wen T. Ji, Cenwen Zhu, Zhiyun Gong, Minghong Gu, Jiming Jiang, Hengxiu Yu
Software Mentions: 1
Published: over 6 years ago
10.1186/2001-1326-1-25
Development and promotion in translational medicine: perspectives from 2012 sino‐american symposium on clinical and translational medicineCited by: 2
Author(s): Mengjia Qian, Duojiao Wu, Ena Wang, Francesco M. Marincola, Wei Wang, William Rhodes, Michael Liebman, Chunxue Bai, Ching‐Wan Lam, György Markó-Varga, Thomas E. Fehniger, Roland Andersson, Xiangdong Wang
Software Mentions: 1
Published: about 12 years ago
10.3389/fpls.2020.00205
The Formation of Sex Chromosomes in Silene latifolia and S. dioica Was Accompanied by Multiple Chromosomal RearrangementsCited by: 13
Author(s): Václav Bačovský, Radim Čegan, Denisa Šimoníková, Eva Hřibová, Roman Hobza
Software Mentions: 1
Published: over 4 years ago