pypi: CellProfiler | Projects | Ecosyste.ms: Papers

10.1186/s13046-021-01863-4

Splicing factors control triple-negative breast cancer cell mitosis through SUN2 interaction and sororin intron retention
Cited by: 16
Author(s): Esmee Koedoot, Eline van Steijn, Marjolein Vermeer, Román González-Prieto, Alfred C.O. Vertegaal, John W.M. Martens, Sylvia E. Le Dévédec, Bob van de Water
Software Mentions: 1
Published: over 4 years ago

10.1002/jev2.12071

Human milk extracellular vesicles target nodes in interconnected signalling pathways that enhance oral epithelial barrier function and dampen immune responses
Cited by: 43
Author(s): Marijke I. Zonneveld, Martijn J. C. van Herwijnen, Marcela M. Fernandez-Gutierrez, Alberta Giovanazzi, Anne Marit de Groot, Marije Kleinjan, Toni M.M. van Capel, Alice J.A.M. Sijts, Leonie S. Taams, Johan Garssen, Esther C. de Jong, Michiel Kleerebezem, Esther N. M. Nolte‐‘t Hoen, Frank A. Redegeld, Marca H. M. Wauben
Software Mentions: 1
Published: over 4 years ago

10.1155/2012/508294

Effects of Substrate Mechanics on Contractility of Cardiomyocytes Generated from Human Pluripotent Stem Cells
Cited by: 143
Author(s): Laurie B. Hazeltine, Chelsey S. Simmons, Max R. Salick, Xiaojun Lian, Mehmet G. Badur, Wenqing Han, Stephanie M. Delgado, Toshiyuki Wakatsuki, Wendy C. Crone, Beth L. Pruitt, Sean P. Palecek
Software Mentions: 1
Published: almost 14 years ago

10.1155/2019/5191630

Towards Fine Whole-Slide Skeletal Muscle Image Segmentation through Deep Hierarchically Connected Networks
Cited by: 1
Author(s): Lei Cui, Jufu Feng, Lin Yang
Software Mentions: 1
Published: over 6 years ago

10.1155/2021/6656080

The Effect of Suppression Taurine on Relocation and Epithelial-Mesenchymal Transition in Mankind Lung Cancer Cells
Cited by: 5
Author(s): Yongyan Deng, Hongjin Li, Yujiao Tang
Software Mentions: 1
Published: over 4 years ago

10.3390/jimaging2040031

3D Clumped Cell Segmentation Using Curvature Based Seeded Watershed
Cited by: 22
Author(s): Thomas Atta-Fosu, Weihong Guo, Dana Jeter, Claudia Mieko Mizutani, Nathan Stopczynski, Rui Sousa‐Neves
Software Mentions: 1
Published: about 9 years ago

10.4049/jimmunol.1801618

SSB1/SSB2 Proteins Safeguard B Cell Development by Protecting the Genomes of B Cell Precursors
Cited by: 5
Author(s): Matthias Pfeifer, Reto Brem, Timothy P. Lippert, Bryant Boulianne, Howin Ng Ho, Mark E. Robinson, Justin Stebbing, Niklas Feldhahn
Software Mentions: 1
Published: over 6 years ago

10.1016/j.jim.2014.11.004

Integrative analysis of T cell motility from multi-channel microscopy data using TIAM
Cited by: 10
Author(s): Viveka Mayya, Willie Neiswanger, Ricardo Medina, Chris H. Wiggins, Michael L. Dustin
Software Mentions: 1
Published: almost 11 years ago

10.1016/j.ijrobp.2020.08.037

Biophysical Characterization of the Leukemic Bone Marrow Vasculature Reveals Benefits of Neoadjuvant Low-Dose Radiation Therapy
Cited by: 6
Author(s): Jamison Brooks, Bijender Kumar, Darren Zuro, Jonathan D. Raybuck, Srideshikan Sargur Madabushi, Paresh Vishwasrao, Liliana Echavarria Parra, Marcin Kortylewski, Brian Armstrong, Jerry W. Froelich, Hui Song
Software Mentions: 1
Published: almost 5 years ago

10.1007/s11255-018-1872-3

Differences in peritoneal response after exposure to low-GDP bicarbonate/lactate-buffered dialysis solution compared to conventional dialysis solution in a uremic mouse model
Cited by: 9
Author(s): Marc Vila Cuenca, Eelco D. Keuning, Wendy Talhout, Nanne J. Paauw, Frans J. van Ittersum, Piet M. ter Wee, Robert H.J. Beelen, Marc G. Vervloet, Evelina Ferrantelli
Software Mentions: 1
Published: over 7 years ago

10.1167/iovs.61.5.10

Dopamine 2 Receptor Signaling Controls the Daily Burst in Phagocytic Activity in the Mouse Retinal Pigment Epithelium
Cited by: 19
Author(s): Varunika Goyal, Christopher DeVera, Virginie Laurent, Jana T Sellers, Micah A Chrenek, David Hicks, Kenkichi Baba, P. Michael Iuvone, Gianluca Tosini
Software Mentions: 1
Published: over 5 years ago

10.1093/infdis/jiw313

Relationship Between HIV Coinfection, Interleukin 10 Production, and<i>Mycobacterium tuberculosis</i>in Human Lymph Node Granulomas
Cited by: 24
Author(s): Collin R. Diedrich, Jennifer A O’Hern, Maximiliano G. Gutierrez, Nafiesa Allie, Patricia Papier, Graeme Meintjes, Anna K. Coussens, Helen Wainwright, Robert J. Wilkinson
Software Mentions: 1
Published: over 9 years ago

10.1007/s10545-017-0025-7

Mutations in SLC25A22: hyperprolinaemia, vacuolated fibroblasts and presentation with developmental delay
Cited by: 15
Author(s): Emma S. Reid, Williams Hj, Glenn Anderson, Malika Benatti, Kling Chong, Chela James, Louise Ocaka, GOSgene, Cheryl Hemingway, Daniel Little, R. Malcolm Brown, Alasdair Parker, Simon Holden, Emma Footitt, Shamima Rahman, Paul Gissen, Philippa B. Mills, Peter T. Clayton
Software Mentions: 1
Published: over 8 years ago

10.1038/s41388-018-0313-1

Shared and independent functions of aPKCλ and Par3 in skin tumorigenesis
Cited by: 17
Author(s): Susanne Vorhagen, Dominik Kleefisch, Oana‐Diana Persa, Annika Graband, Alexandra Schwickert, Michael Saynisch, Michael Leitges, Carien M. Niessen, Sandra Iden
Software Mentions: 1
Published: over 7 years ago

10.1038/s41388-019-0850-2

Signalling involving MET and FAK supports cell division independent of the activity of the cell cycle-regulating CDK4/6 kinases
Cited by: 23
Author(s): Chi Zhang, S. Stockwell, May Elbanna, Robin Ketteler, Jamie Freeman, Bissan Al‐Lazikani, Suzanne A. Eccles, Alexis de Haven Brandon, Florence I. Raynaud, Angela Hayes, Paul A. Clarke, Paul Workman, Sibylle Mittnacht
Software Mentions: 1
Published: over 6 years ago

10.1038/s41388-020-1187-6

Mitotic slippage is determined by p31comet and the weakening of the spindle-assembly checkpoint
Cited by: 17
Author(s): Tsun Ming Lok, Yang Wang, Wendy Kaichun Xu, Siwei Xie, Hoi Tang, Randy Y. C. Poon
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41388-020-01621-4

Inhibition of PFKFB3 induces cell death and synergistically enhances chemosensitivity in endometrial cancer
Cited by: 25
Author(s): Yu Xiao, Ling Jin, Chaolin Deng, Yalin Guan, Eleftheria Kalogera, Upasana Ray, Prabhu Thirusangu, Julie Staub, Sayantani Sarkar Bhattacharya, Haotian Xu, Xiaoling Fang, Viji Shridhar
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41389-021-00329-8

Dysregulated G2 phase checkpoint recovery pathway reduces DNA repair efficiency and increases chromosomal instability in a wide range of tumours
Cited by: 2
Author(s): Madushan Fernando, Pascal H.G. Duijf, Martina Proctor, Alexander J. Stevenson, Anna Ehmann, Shivam Vora, Dubravka Škalamera, Mark N. Adams, Brian Gabrielli
Software Mentions: 1
Published: over 4 years ago

10.1016/j.jid.2018.04.015

Fractional Sunburn Threshold UVR Doses Generate Equivalent Vitamin D and DNA Damage in Skin Types I–VI but with Epidermal DNA Damage Gradient Correlated to Skin Darkness
Cited by: 43
Author(s): Barbara Shih, Mark D. Farrar, Marcus S. Cooke, Joanne E. Osman, Abigail K. Langton, Richard Kift, Ann R. Webb, Jacqueline Berry, Rachel Watson, Andy Vail, Frank R. de Gruijl, Lesley E. Rhodes
Software Mentions: 1
Published: about 7 years ago

10.1194/jlr.P075119

Identification and characterization of a novel DGAT1 missense mutation associated with congenital diarrhea
Cited by: 42
Author(s): Nina L. Gluchowski, Chandramohan Chitraju, Joseph A. Picoraro, Niklas Mejhert, Shirly Pinto, Winnie Xin, Daniel Kamin, Harland S. Winter, Wendy K. Chung, Tobias C. Walther, Robert V. Farese
Software Mentions: 1
Published: over 8 years ago

10.1194/jlr.D085217

High-throughput, nonperturbing quantification of lipid droplets with digital holographic microscopy
Cited by: 14
Author(s): Vasco Campos, Benjamin Rappaz, Fabien Kuttler, Gerardo Turcatti, Olaia Naveiras
Software Mentions: 1
Published: almost 8 years ago

10.1007/s10856-018-6102-0

An important step towards a prevascularized islet macroencapsulation device—effect of micropatterned membranes on development of endothelial cell network
Cited by: 21
Author(s): Katarzyna Skrzypek, Milou Groot Nibbelink, Lisanne Karbaat, Marcel Karperien, Aart van Apeldoorn, Dimitrios Stamatialis
Software Mentions: 1
Published: over 7 years ago

10.1007/s10856-018-6178-6

An important step towards a prevascularized islet microencapsulation device: in vivo prevascularization by combination of mesenchymal stem cells on micropatterned membranes
Cited by: 10
Author(s): Milou Groot Nibbelink, Katarzyna Skrzypek, Lisanne Karbaat, Sanne K. Both, Jacqueline R. M. Plass, Bettie Klomphaar, Jéré van Lente, Sieger Henke, Marcel Karperien, Dimitrios Stamatialis, Aart van Apeldoorn
Software Mentions: 1
Published: about 7 years ago

10.1111/jmi.12178

Pipeline for illumination correction of images for high‐throughput microscopy
Cited by: 84
Author(s): Shantanu Singh, Mark-Anthony Bray, Thouis R. Jones, Anne E. Carpenter
Software Mentions: 1
Published: about 11 years ago

10.1111/jmi.12700

Automated detection of fluorescent cells in in-resin fluorescence sections for integrated light and electron microscopy
Cited by: 14
Author(s): José Delpiano, Luis Pizarro, Christopher J. Peddie, Martin L. Jones, Lewis D. Griffin, Lucy M. Collinson
Software Mentions: 1
Published: over 7 years ago

10.1111/jmi.12853

Application of automated electron microscopy imaging and machine learning to characterise and quantify nanoparticle dispersion in aqueous media
Cited by: 20
Author(s): Martha Ilett, John W. Wills, Paul Rees, Sandeep Sharma, Stuart Micklethwaite, Andy Brown, Rik Brydson, Nicole Hondow
Software Mentions: 1
Published: almost 6 years ago

10.7554/eLife.41460

Genome-wide interrogation of extracellular vesicle biology using barcoded miRNAs
Cited by: 22
Author(s): Albert Lu, Paulina S. Wawro, David W. Morgens, Fernando Gutiérrez Pórtela, Michael C. Bassik, Suzanne R Pfeffer
Software Mentions: 1
Published: almost 7 years ago

10.7554/eLife.57297

Eater cooperates with Multiplexin to drive the formation of hematopoietic compartments
Cited by: 9
Author(s): Gábor Csordás, Ferdi Grawe, Mirka Uhlířová
Software Mentions: 1
Published: about 5 years ago

10.7554/eLife.30510

Automated cell-type classification in intact tissues by single-cell molecular profiling
Cited by: 91
Author(s): Monica Nagendran, Daniel P. Riordan, Pehr B. Harbury, Tushar J. Desai
Software Mentions: 1
Published: almost 8 years ago

10.7554/eLife.06029

The Rab6-regulated KIF1C kinesin motor domain contributes to Golgi organization
Cited by: 50
Author(s): Peter L. Lee, Maikke B. Ohlson, Suzanne R Pfeffer
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.60917

A prion accelerates proliferation at the expense of lifespan
Cited by: 10
Author(s): David M Garcia, E. Campbell, Christopher M. Jakobson, Mitsuhiro Tsuchiya, Ethan A Shaw, Acadia DiNardo, Matt Kaeberlein, Daniel F. Jarosz
Software Mentions: 1
Published: about 4 years ago

10.7554/eLife.07068

Phosphodiesterase 4D acts downstream of Neuropilin to control Hedgehog signal transduction and the growth of medulloblastoma
Cited by: 33
Author(s): Xuecai Ge, Ljiljana Milenković, Kaye Suyama, Tom A. Hartl, Teresa Purzner, Amy Winans, Tobias Meyer, Matthew P. Scott
Software Mentions: 1
Published: about 10 years ago

10.1021/acschemneuro.1c00215

Domain-Independent Inhibition of CBP/p300 Attenuates α-Synuclein Aggregation
Cited by: 4
Author(s): Irena Hlushchuk, Heikki Ruskoaho, Andrii Domanskyi, Mikko Airavaara, Mika J. Välimäki
Software Mentions: 1
Published: over 4 years ago

10.7554/eLife.49817

TRF1 averts chromatin remodelling, recombination and replication dependent-break induced replication at mouse telomeres
Cited by: 23
Author(s): Rosa María Porreca, Emilia Herrera-Moyano, Eleni Skourti, Law P, Roser Gonzalez Franco, Alex Montoya, Peter Faull, Holger Kramer, Jean‐Baptiste Vannier
Software Mentions: 1
Published: almost 6 years ago

10.7554/eLife.12790

Protein flexibility is required for vesicle tethering at the Golgi
Cited by: 58
Author(s): Pak-yan Patricia Cheung, Charles Limouse, Hideo Mabuchi, Suzanne R Pfeffer
Software Mentions: 1
Published: almost 10 years ago

10.7554/eLife.30473

Rapid DNA replication origin licensing protects stem cell pluripotency
Cited by: 80
Author(s): Jacob P. Matson, Raluca Dumitru, Philip Coryell, Ryan M. Baxley, Weili Chen, Kirk Twaroski, Beau R. Webber, Jakub Tolar, Anja‐Katrin Bielinsky, Jeremy E. Purvis, Jeanette Gowen Cook
Software Mentions: 1
Published: about 8 years ago

10.7554/eLife.32490

Lymphatic endothelium stimulates melanoma metastasis and invasion via MMP14-dependent Notch3 and β1-integrin activation
Cited by: 29
Author(s): Pirita Pekkonen, Sanni Alve, Giuseppe Balistreri, Silvia Gramolelli, Olga Tatti-Bugaeva, Ilkka Paatero, Otso Niiranen, Krista Tuohinto, Nina Perälä, Adewale Taiwo, Nadezhda Zinovkina, Pauliina Repo, Katherine Icay, Johanna Ivaska, Pipsa Saharinen, Sampsa Hautaniemi, Kaisa Lehti, Päivi M. Ojala
Software Mentions: 1
Published: over 7 years ago

10.7554/eLife.03939

Kinetic competition during the transcription cycle results in stochastic RNA processing
Cited by: 177
Author(s): Antoine Coulon, Matthew L. Ferguson, Valeria de Turris, Murali Palangat, Carson C. Chow, Daniel R. Larson
Software Mentions: 1
Published: about 11 years ago

10.7554/eLife.11880

Ceapins inhibit ATF6α signaling by selectively preventing transport of ATF6α to the Golgi apparatus during ER stress
Cited by: 104
Author(s): Ciara M Gallagher, Peter Walter
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.11878

Ceapins are a new class of unfolded protein response inhibitors, selectively targeting the ATF6α branch
Cited by: 136
Author(s): Ciara M Gallagher, Carolina Garri, Erica L. Cain, Kenny Kean‐Hooi Ang, Christopher G. Wilson, Steven Chen, Brian R. Hearn, Priyadarshini Jaishankar, Andrés Aranda-Díaz, Michelle R. Arkin, Adam R. Renslo, Peter Walter
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.46997

TLR induces reorganization of the IgM-BCR complex regulating murine B-1 cell responses to infections
Cited by: 32
Author(s): Hannah P Savage, Kathrin Kläsener, Fauna Leah Smith, Zheng Luo, Michael Reth, Nicole Baumgarth
Software Mentions: 1
Published: about 6 years ago

10.7554/eLife.59770

Alpha-satellite RNA transcripts are repressed by centromere–nucleolus associations
Cited by: 43
Author(s): Leah Bury, Brittania Moodie, Jimmy Ly, Liliana S. McKay, Karen H. Miga, Iain M. Cheeseman
Software Mentions: 1
Published: about 5 years ago

10.7554/eLife.67926

Role of BRCA2 DNA-binding and C-terminal domain in its mobility and conformation in DNA repair
Cited by: 15
Author(s): Maarten W. Paul, Arshdeep Sidhu, Yongxin Liang, Sarah E van Rossum-Fikkert, Hanny Odijk, Alex N. Zelensky, Roland Kanaar, Claire Wyman
Software Mentions: 1
Published: over 4 years ago

10.7554/eLife.31037

YAP and TAZ regulate adherens junction dynamics and endothelial cell distribution during vascular development
Cited by: 168
Author(s): Filipa Neto, Alexandra Klaus-Bergmann, Yu Ting Ong, Silvanus Alt, Anne-Clémence Vion, Anna Szymborska, Joana Rita Carvalho, Irene Hollfinger, Eireen Bartels-Klein, Cláudio A. Franco, Michael Potente, Holger Gerhardt
Software Mentions: 1
Published: almost 8 years ago

10.7554/eLife.25681

Elastic force restricts growth of the murine utricle
Cited by: 26
Author(s): Ksenia Gnedeva, Adrián Jacobo, Joshua D. Salvi, Aleksandra A. Petelski, A. J. Hudspeth
Software Mentions: 1
Published: over 8 years ago

10.7554/eLife.55013

Spatially compartmentalized phase regulation of a Ca2+-cAMP-PKA oscillatory circuit
Cited by: 25
Author(s): Brian Tenner, Michael Getz, Brian Ross, Donya Ohadi, Christopher H. Bohrer, Eric C. Greenwald, Sohum Mehta, Jie Xiao, Padmini Rangamani, Jin Zhang
Software Mentions: 1
Published: about 5 years ago

10.7554/eLife.64251

Time-resolved phosphoproteomics reveals scaffolding and catalysis-responsive patterns of SHP2-dependent signaling
Cited by: 13
Author(s): Vidyasiri Vemulapalli, Lily A. Chylek, Alison R. Erickson, Anamarija Pfeiffer, Khal-Hentz Gabriel, Jonathan R. LaRochelle, Kartik Subramanian, Ruili Cao, Kimberley Stegmaier, Morvarid Mohseni, Matthew J. LaMarche, Michael G. Acker, Peter K. Sorger, Steven P. Gygi, Stephen C. Blacklow
Software Mentions: 1
Published: over 4 years ago

10.7554/eLife.52687

Squalene emulsion-based vaccine adjuvants stimulate CD8 T cell, but not antibody responses, through a RIPK3-dependent pathway
Cited by: 39
Author(s): Eui Ho Kim, Matthew C. Woodruff, L. A. Grigoryan, Bárbara Maier, Song Hee Lee, Pratyusha Mandal, Mario Cortese, Muktha S. Natrajan, Rajesh Ravindran, Huailiang Ma, Miriam Mérad, Alexander D. Gitlin, Edward S. Mocarski, Joshy Jacob, Bali Pulendran
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.23268

Copy-number and gene dependency analysis reveals partial copy loss of wild-type SF3B1 as a novel cancer vulnerability
Cited by: 63
Author(s): Brenton R. Paolella, William J. Gibson, Laura M. Urbanski, John A. Alberta, Travis I. Zack, Pratiti Bandopadhayay, Caitlin A. Nichols, Pankaj K. Agarwalla, Meredith S. Brown, Rebecca Lamothe, Yanke Yu, Peter S. Choi, Esther A. Obeng, Dirk Heckl, Guo Wei, Belinda Wang, Aviad Tsherniak, Francisca Vázquez, Barbara A. Weir, David E. Root, Glenn S. Cowley, Sara J. Buhrlage, Charles D. Stiles, Benjamin L. Ebert, William C. Hahn, Robin Reed, Rameen Beroukhim
Software Mentions: 1
Published: almost 9 years ago

10.7554/eLife.08931

Digital signaling decouples activation probability and population heterogeneity
Cited by: 58
Author(s): Ryan Kellogg, Chengzhe Tian, Tomasz Lipniacki, Stephen R. Quake, Savaş Tay
Software Mentions: 1
Published: about 10 years ago

10.7554/eLife.49683

Improving drug discovery using image-based multiparametric analysis of the epigenetic landscape
Cited by: 16
Author(s): Chen Farhy, Santosh Hariharan, Jarkko Ylanko, Luis Orozco, Fu‐Yue Zeng, Ian Pass, Fernando Ugarte, Erik Forsberg, Chun-Teng Huang, David W. Andrews, Alexey V. Terskikh
Software Mentions: 1
Published: about 6 years ago

10.7554/eLife.51539

An efficient CRISPR-based strategy to insert small and large fragments of DNA using short homology arms
Cited by: 91
Author(s): Oguz Kanca, Jonathan Zirin, Jorge García-Marqués, Shannon M. Knight, Donghui Yang‐Zhou, Gabriel Amador, Hyunglok Chung, Zhuang Zuo, Liwen Ma, Yuchun He, Wen‐Jen Lin, Ying Fang, Ming Ge, Shinya Yamamoto, Karen L. Schulze, Yanhui Hu, Allan C. Spradling, Stephanie E. Mohr, Norbert Perrimon, Hugo J. Bellen
Software Mentions: 1
Published: about 6 years ago

10.7554/eLife.38187

Body size-dependent energy storage causes Kleiber’s law scaling of the metabolic rate in planarians
Cited by: 51
Author(s): Albert Thommen, Steffen Werner, Olga Frank, Patrick Jenny, Oskar Knittelfelder, Yihui Quek, Karim Fahmy, Andrej Shevchenko, Benjamin M. Friedrich, Frank Jülicher, Jochen C. Rink
Software Mentions: 1
Published: almost 7 years ago

10.7554/eLife.10851

Cohesin-interacting protein WAPL-1 regulates meiotic chromosome structure and cohesion by antagonizing specific cohesin complexes
Cited by: 59
Author(s): Oliver Crawley, Consuelo Barroso, Sarah Testori, Nuria Ferrándiz, Nicola Silva, Maikel Castellano‐Pozo, Angel Luis Jaso-Tamame, Enrique Martínez-Pérez
Software Mentions: 1
Published: almost 10 years ago

10.7554/eLife.40314

Translation attenuation by minocycline enhances longevity and proteostasis in old post-stress-responsive organisms
Cited by: 40
Author(s): Gregory M. Solis, Rozina Kardakaris, Elizabeth R. Valentine, Liron Bar-Peled, Alice L Chen, Megan M. Blewett, Mark McCormick, James R. Williamson, Brian K. Kennedy, Benjamin F. Cravatt, Michael Petrascheck
Software Mentions: 1
Published: almost 7 years ago

10.7554/eLife.03708

Juxtaposition of heterozygous and homozygous regions causes reciprocal crossover remodelling via interference during Arabidopsis meiosis
Cited by: 88
Author(s): Piotr A Ziolkowski, Luke E. Berchowitz, Christophe Lambing, Nataliya E. Yelina, Xiaohui Zhao, Krystyna A. Kelly, Kyuha Choi, Liliana Ziolkowska, Viviana June, Eugenio Sánchez-Morán, F. Christopher H. Franklin, Gregory P. Copenhaver, Ian Henderson
Software Mentions: 1
Published: over 10 years ago

10.7554/eLife.61432

Cytoneme delivery of Sonic Hedgehog from ligand-producing cells requires Myosin 10 and a Dispatched-BOC/CDON co-receptor complex
Cited by: 38
Author(s): Eric T. Hall, Miriam E. Dillard, Daniel P. Stewart, Yan Zhang, Ben Wagner, Rachel M. Levine, Shondra M. Pruett-Miller, April Sykes, Jamshid Temirov, Richard E. Cheney, Motomi Mori, Camenzind G. Robinson, Stacey K. Ogden
Software Mentions: 1
Published: almost 5 years ago

10.7554/eLife.15550

Small molecule proteostasis regulators that reprogram the ER to reduce extracellular protein aggregation
Cited by: 174
Author(s): Lars Plate, Christina B Cooley, John J. Chen, Ryan J Paxman, Ciara M Gallagher, Franck Madoux, Joseph C. Genereux, Wesley Dobbs, Dan Garza, Timothy Spicer, Louis Scampavia, Steven J Brown, Hugh Rosen, Evan T. Powers, Peter Walter, Peter Hodder, R. Luke Wiseman, Jeffery W. Kelly
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.66440

Quantitative live-cell imaging and computational modeling shed new light on endogenous WNT/CTNNB1 signaling dynamics
Cited by: 19
Author(s): Saskia Madelon Ada de Man, G. Zwanenburg, Tanne van der Wal, Mark A. Hink, Renée van Amerongen
Software Mentions: 1
Published: over 4 years ago

10.7554/eLife.40033

FGF2-FGFR1 signaling regulates release of Leukemia-Protective exosomes from bone marrow stromal cells
Cited by: 38
Author(s): Nathalie Javidi-Sharifi, Jacqueline Martinez, Isabel English, Sunil Kumar Joshi, Renata Scopim-Ribeiro, Shelton K Viola, David K. Edwards, Anupriya Agarwal, Clàudia López, Danielle Jorgens, Jeffrey W. Tyner, Brian J. Druker, Elie Traer
Software Mentions: 1
Published: almost 7 years ago

10.7554/eLife.37549

Engineering induction of singular neural rosette emergence within hPSC-derived tissues
Cited by: 70
Author(s): Gavin Knight, Brady F Lundin, Nisha Iyer, Lydia Ashton, William A. Sethares, Rebecca Willett, Randolph S. Ashton
Software Mentions: 1
Published: about 7 years ago

10.7554/eLife.57894

PTEN and DNA-PK determine sensitivity and recovery in response to WEE1 inhibition in human breast cancer
Cited by: 14
Author(s): Andrä Brunner, Aldwin Suryo Rahmanto, Henrik J. Johansson, Marcela Franco, Johanna Viiliäinen, Mohiuddin Gazi, Oliver Frings, Erik Fredlund, Charles Spruck, Janne Lehtiö, Juha Rantala, Lars‐Gunnar Larsson, Olle Sangfelt
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.12552

Sequestration of host metabolism by an intracellular pathogen
Cited by: 62
Author(s): Lena Gehre, Olivier Gorgette, Stéphanie Perrinet, Marie‐Christine Prévost, Mathieu Ducatez, Amanda M. Giebel, David E. Nelson, Steven Ball, Agathe Subtil
Software Mentions: 1
Published: over 9 years ago

10.7554/eLife.20813

Acetylated tubulin is essential for touch sensation in mice
Cited by: 74
Author(s): Shane J. Morley, Yanmei Qi, Loredana Iovino, Laura Andolfi, Da Guo, Nereo Kalebic, Laura Castaldi, Christian Tischer, Carla Portulano, Giulia Bolasco, Kalyanee Shirlekar, Claudia M Fusco, Antonino Asaro, Federica Fermani, Mayya Sundukova, Ulf Matti, Luc Reymond, Adele De Ninno, Luca Businaro, Kai Johnsson, Marco Lazzarino, Jonas Ries, Yannick Schwab, Jing Hu, Paul A. Heppenstall
Software Mentions: 1
Published: almost 9 years ago

10.7554/eLife.46595

Ceapins block the unfolded protein response sensor ATF6α by inducing a neomorphic inter-organelle tether
Cited by: 42
Author(s): Sandra E. Torres, Ciara M Gallagher, Lars Plate, Meghna Gupta, Christina R Liem, Xiaoyan Guo, Ruilin Tian, Robert M. Stroud, Martin Kampmann, Jonathan S. Weissman, Peter Walter
Software Mentions: 1
Published: over 6 years ago

10.7554/eLife.58020

The RIF1-long splice variant promotes G1 phase 53BP1 nuclear bodies to protect against replication stress
Cited by: 14
Author(s): Lotte P. Watts, Toyoaki Natsume, Yuichiro Saito, Javier Garzón, Qianqian Dong, Lora Boteva, Nick Gilbert, Masato T. Kanemaki, Shin‐ichiro Hiraga, Anne Donaldson
Software Mentions: 1
Published: about 5 years ago

10.7554/eLife.38536

Spatial patterning of liver progenitor cell differentiation mediated by cellular contractility and Notch signaling
Cited by: 30
Author(s): Kerim B. Kaylan, Ian C. Berg, Matthew J. Biehl, Aidan Brougham-Cook, Ishita Jain, Sameed M Jamil, Lauren H Sargeant, Nicholas J Cornell, Lori T. Raetzman, Gregory H. Underhill
Software Mentions: 1
Published: almost 7 years ago

10.7554/eLife.28377

Initial elevations in glutamate and dopamine neurotransmission decline with age, as does exploratory behavior, in LRRK2 G2019S knock-in mice
Cited by: 66
Author(s): Mattia Volta, Dayne Beccano-Kelly, Sarah A. Paschall, Stefano Cataldi, Sarah E MacIsaac, Naila Kuhlmann, Chelsie Kadgien, Igor Tatarnikov, Jesse Fox, Jaskaran Khinda, Emma Mitchell, Sabrina Bergeron, Heather L. Melrose, Matthew J. Farrer, Austen J. Milnerwood
Software Mentions: 1
Published: about 8 years ago

10.7554/eLife.31922

Combinatorial programming of human neuronal progenitors using magnetically-guided stoichiometric mRNA delivery
Cited by: 6
Author(s): Shiva Azimi, Steven D. Sheridan, Mostafa Ghannad-Rezaie, Peter M. Eimon, Mehmet Fatih Yanik
Software Mentions: 1
Published: over 7 years ago

10.3390/ijms160921658

A Novel Nanoprobe for Multimodal Imaging Is Effectively Incorporated into Human Melanoma Metastatic Cell Lines
Cited by: 10
Author(s): Synnøve Nymark Aasen, Aneta Pospíšilová, Tilo Wolf Eichler, Jiří Pánek, Martin Hrubý, Petr Štěpánek, Endy Spriet, Daniel Jirák, Kai Ove Skaftnesmo, Frits Thorsen
Software Mentions: 1
Published: about 10 years ago

10.3390/ijms18112491

Nitric Oxide Mediates Crosstalk between Interleukin 1β and WNT Signaling in Primary Human Chondrocytes by Reducing DKK1 and FRZB Expression
Cited by: 27
Author(s): Leilei Zhong, Stefano Schivo, Xiaobin Huang, Jeroen Leijten, Marcel Karperien, Janine N. Post
Software Mentions: 1
Published: almost 8 years ago

10.3390/ijms19082233

Restraining Akt1 Phosphorylation Attenuates the Repair of Radiation-Induced DNA Double-Strand Breaks and Reduces the Survival of Irradiated Cancer Cells
Cited by: 11
Author(s): Klaudia Szymonowicz, Sebastian Oeck, A. Krysztofiak, Jansje van der Linden, George Iliakis, Verena Jendrossek
Software Mentions: 1
Published: over 7 years ago

10.3390/ijms19082376

The ATR-Activation Domain of TopBP1 Is Required for the Suppression of Origin Firing during the S Phase
Cited by: 13
Author(s): Miiko Sokka, Dennis Koalick, Peter Hemmerich, Juhani E. Syväoja, Helmut Pospiech
Software Mentions: 1
Published: over 7 years ago

10.3390/ijms20051244

Ginsenoside Rh2 Ameliorates Doxorubicin-Induced Senescence Bystander Effect in Breast Carcinoma Cell MDA-MB-231 and Normal Epithelial Cell MCF-10A
Cited by: 26
Author(s): Jingang Hou, Byeong Min Jeon, Yeejin Yun, Chang-Hao Cui, Sun Chang Kim
Software Mentions: 1
Published: over 6 years ago

10.3390/ijms20174266

Glomerular Collagen Deposition and Lipocalin-2 Expression Are Early Signs of Renal Injury in Prediabetic Obese Rats
Cited by: 7
Author(s): Éva Nóra Bukosza, Tamás Kaucsár, Mária Godó, Enikő Lajtár, Pál Tod, Gábor Koncsos, Zoltán V. Varga, Tamás Baranyai, Minh Tú Nguyen, Helga Schachner, Csaba Söti, Péter Ferdinándy, Zoltán Giricz, Gábor Szénási, Péter Hamar
Software Mentions: 1
Published: about 6 years ago

10.3390/ijms20215337

Insight into Mechanobiology: How Stem Cells Feel Mechanical Forces and Orchestrate Biological Functions
Cited by: 73
Author(s): Chiara Argentati, Francesco Morena, Ilaria Tortorella, Martina Bazzucchi, Serena Porcellati, Carla Emiliani, Sabata Martino
Software Mentions: 1
Published: about 6 years ago

10.3390/ijms20246265

SLC38A10 (SNAT10) is Located in ER and Golgi Compartments and Has a Role in Regulating Nascent Protein Synthesis
Cited by: 12
Author(s): Rekha Tripathi, Kimia Hosseini, Vasiliki Arapi, Robert Fredriksson, Sonchita Bagchi
Software Mentions: 1
Published: almost 6 years ago

10.3390/ijms21072588

Healthspan Maintenance and Prevention of Parkinson’s-like Phenotypes with Hydroxytyrosol and Oleuropein Aglycone in C. elegans
Cited by: 101
Author(s): Giovanni Brunetti, Gabriele Di Rosa, Maria Scuto, Manuela Leri, Massimo Stefani, Christian Schmitz‐Linneweber, Vittorio Calabrese, Nadine Saul
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms21082949

Crocetin Prevents RPE Cells from Oxidative Stress through Protection of Cellular Metabolic Function and Activation of ERK1/2
Cited by: 15
Author(s): Padideh Karimi, Ali Gheisari, Sylvia J. Gasparini, Hossein Baharvand, Faezeh Shekari, Leila Satarian, Marius Ader
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms21114127

Large-Scale Image Analysis for Investigating Spatio-Temporal Changes in Nuclear DNA Damage Caused by Nitrogen Atmospheric Pressure Plasma Jets
Cited by: 6
Author(s): Xu Han, James Kapaldo, Yueying Liu, M. Sharon Stack, Elahe Alizadeh, Sylwia Ptasińska
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms21113893

Healthspan Enhancement by Olive Polyphenols in C. elegans Wild Type and Parkinson’s Models
Cited by: 71
Author(s): Gabriele Di Rosa, Giovanni Brunetti, Maria Scuto, Angela Trovato Salinaro, Edward J. Calabrese, Roberto Crea, Christian Schmitz‐Linneweber, Vittorio Calabrese, Nadine Saul
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms21145004

Genetically Encoded Fluorescent Sensor for Poly-ADP-Ribose
Cited by: 6
Author(s): Ekaterina O. Serebrovskaya, Nadezda M Podvalnaya, Varvara V. Dudenkova, А. Ефремова, Nadya G. Gurskaya, D.A. Gorbachev, Artem V. Luzhin, Omar L. Kantidze, Elena V. Zagaynova, С. И. Шрам, Konstantin A. Lukyanov
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms21228656

Tissue Printing and Dual Excitation Flow Cytometry for Oxidative Stress—New Tools for Reactive Oxygen Species Research in Seed Biology
Cited by: 5
Author(s): Danuta Cembrowska-Lech
Software Mentions: 1
Published: about 5 years ago

10.3390/ijms22031375

Extracellular Vesicles Do Not Mediate the Anti-Inflammatory Actions of Mouse-Derived Adipose Tissue Mesenchymal Stem Cells Secretome
Cited by: 8
Author(s): María Carmen Carceller, Marı́a Isabel Guillén, M. Luisa Gil, Marı́a José Alcaraz
Software Mentions: 1
Published: almost 5 years ago

10.3390/ijms22041813

Human Islet Microtissues as an In Vitro and an In Vivo Model System for Diabetes
Cited by: 12
Author(s): Joan Mir-Coll, Tilo Moede, Meike Paschen, Aparna Neelakandhan, Ismael Valladolid‐Acebes, Barbara Leibiger, Adelinn Biernath, Carina Ämmälä, Ingo B. Leibiger, Burçak Yesildag, Per Olof Berggren
Software Mentions: 1
Published: almost 5 years ago

10.3390/ijms22052365

A Role for Human DNA Polymerase λ in Alternative Lengthening of Telomeres
Cited by: 3
Author(s): Elisa Mentegari, Federica Bertoletti, Miroslava Kiššová, Elisa Zucca, S. Galli, Giulia Tagliavini, Anna Garbelli, Antonio Maffia, Silvia Bione, Elena Ferrari, Fabrizio d’Adda di Fagagna, Sofia Francia, Simone Sabbioneda, Liuh‐Yow Chen, Joachim Lingner, Valérie Bergoglio, Jean-Sébastien Hoffmann, Ulrich Hübscher, Emmanuele Crespan, Giovanni Maga
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms22094436

Radiation Enhancer Effect of Platinum Nanoparticles in Breast Cancer Cell Lines: In Vitro and In Silico Analyses
Cited by: 20
Author(s): Marie Hullo, Romain Grall, Y. Perrot, Cécile Mathé, Véronique Ménard, Xingsheng Yang, S. Lacombe, Erika Porcel, C. Villagrasa, Sylvie Chevillard, Emmanuelle Bourneuf
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms22094537

Small-Molecule Inhibitors of the RNA M6A Demethylases FTO Potently Support the Survival of Dopamine Neurons
Cited by: 18
Author(s): Simona Selberg, Li-Ying Yu, Olesja Bondarenko, Esko Kankuri, Neinar Seli, Vera Kovaleva, Koit Herodes, Märt Saarma, Mati Karelson
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms22115588

Bioactive Nanofiber-Based Conduits in a Peripheral Nerve Gap Management—An Animal Model Study
Cited by: 12
Author(s): Tomasz Dębski, Ewa Kijeńska‐Gawrońska, Aleksandra Zołocińska, Katarzyna Siennicka, Anna Słysz, Wiktor Paskal, Paweł Włodarski, Wojciech Święszkowski, Zygmunt Pojda
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms22126236

TNFα-Induced LDL Cholesterol Accumulation Involve Elevated LDLR Cell Surface Levels and SR-B1 Downregulation in Human Arterial Endothelial Cells
Cited by: 5
Author(s): Emmanuel U. Okoro
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms22126553

In Vitro and In Vivo Efficacies of the Linear and the Cyclic Version of an All-d-Enantiomeric Peptide Developed for the Treatment of Alzheimer’s Disease
Cited by: 5
Author(s): Sarah Schemmert, Luana Cristina Camargo, Dominik Honold, Ian Gering, Janine Kutzsche, Antje Willuweit, Dieter Willbold
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms22137098

New Concept and Apparatus for Cytocentrifugation and Cell Processing for Microscopy Analysis
Cited by: 1
Author(s): Anna Ligasová, Karel Koberna
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms22168644

Ultrasensitive and Multiplexed Protein Imaging with Cleavable Fluorescent Tyramide and Antibody Stripping
Cited by: 2
Author(s): Thai H. Pham, Christopher D. Nazaroff, Joshua LaBaer, Jia Guo
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms22168853

Cell Stress Induces Mislocalization of Transcription Factors with Mitochondrial Enrichment
Cited by: 3
Author(s): Chiara Rossi, Anna Fernàndez, Pascual Torres, Omar Ramírez‐Núñez, Ana Belén Granado-Serrano, Laia Fontdevila, Mònica Povedano, Reinald Pamplona, Isidró Ferrer, Manuel Portero‐Otín
Software Mentions: 1
Published: over 4 years ago

10.3390/ijms22179387

Drebrin Regulates Acetylcholine Receptor Clustering and Organization of Microtubules at the Postsynaptic Machinery
Cited by: 2
Author(s): Paloma Álvarez-Suárez, Natalia Nowak, Anna Protasiuk-Filipunas, Hiroyuki Yamazaki, Tomasz J. Prószyński, Marta Gawor
Software Mentions: 1
Published: about 4 years ago

10.3390/ijms221910730

Molecular Mechanism of the Anti-Inflammatory Action of Heparin
Cited by: 17
Author(s): L. Litov, P. Petkov, Miroslav Rangelov, Nevena Ilieva, Elena Lilkova, Nadezhda Todorova, Elena Krachmarova, Kristina Malinova, Anastas Gospodinov, Rumyana Hristova, Iván Ivanov, Genoveva Nacheva
Software Mentions: 1
Published: about 4 years ago

10.1186/s12951-017-0258-5

Optimizing conditions for labeling of mesenchymal stromal cells (MSCs) with gold nanoparticles: a prerequisite for in vivo tracking of MSCs
Cited by: 32
Author(s): Philipp Nold, Raimo Hartmann, Neus Feliu, Karsten Kantner, Mahmoud Gamal, Beatriz Pelaz, Jonas Hühn, Xing Sun, Philipp Jungebluth, Pablo del Pino, Holger Hackstein, Paolo Macchiarini, Wolfgang J. Parak, Cornelia Brendel
Software Mentions: 1
Published: over 8 years ago

10.1186/s11689-020-09332-3

A small-molecule screen reveals novel modulators of MeCP2 and X-chromosome inactivation maintenance
Cited by: 15
Author(s): Hyeong-Min Lee, M. Bram Kuijer, Nerea Ruiz Blanes, Ellen P. Clark, Megumi Aita, Lorena Galiano Arjona, Agnieszka Kokot, Noah Sciaky, Jeremy M. Simon, Sanchita Bhatnagar, Benjamin D. Philpot, Andrea Cerase
Software Mentions: 1
Published: about 5 years ago

10.1186/s12974-019-1647-5

HSV-1 triggers paracrine fibroblast growth factor response from cortical brain cells via immediate-early protein ICP0
Cited by: 13
Author(s): Niko Hensel, Verena Raker, Benjamin Förthmann, Nora Tula Detering, Sabrina Kubinski, Anna Buch, Georgios Katzilieris-Petras, Julia Spanier, Viktoria Gudi, Sylvia Wagenknecht, Verena Kopfnagel, Thomas Werfel, Martin Stangel, Andreas Beineke, Ulrich Kalinke, Søren R. Paludan, Beate Sodeik, Peter Claus
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12974-017-0813-x

Aprepitant limits in vivo neuroinflammatory responses in a rhesus model of Lyme neuroborreliosis
Cited by: 11
Author(s): Alejandra N. Martínez, Amanda R. Burmeister, Geeta Ramesh, Lara A. Doyle-Meyers, Ian Marriott, Mario T. Philipp
Software Mentions: 1
Published: almost 9 years ago

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