pypi: CellProfiler | Projects | Ecosyste.ms: Papers

10.3389/fneur.2017.00335

Changes in Ionic Conductance Signature of Nociceptive Neurons Underlying Fabry Disease Phenotype
Cited by: 23
Author(s): Barbara Namer, Kirstin Ørstavik, Roland Schmidt, Norbert Mair, Inge Petter Kleggetveit, Maximillian Zeidler, Theresa Martha, Ellen Jørum, Martin Schmelz, Theodora Kalpachidou, Michaela Kress, Michiel Langeslag
Software Mentions: 1
Published: over 8 years ago

10.3389/fnins.2017.00737

Parkinson's Disease Skin Fibroblasts Display Signature Alterations in Growth, Redox Homeostasis, Mitochondrial Function, and Autophagy
Cited by: 47
Author(s): Joji M. Y. Teves, Vedanshi Bhargava, Konner R. Kirwan, Mandi J. Corenblum, Rebecca Justiniano, Georg T. Wondrak, Annadurai Anandhan, Andrew J. Flores, David Schipper, Zain Khalpey, James E. Sligh, Clara Curiel‐Lewandrowski, Scott J. Sherman, Lalitha Madhavan
Software Mentions: 1
Published: almost 8 years ago

10.3389/fnins.2020.00274

Exogenous Orexin-A Microinjected Into Central Nucleus of the Amygdala Modulates Feeding and Gastric Motility in Rats
Cited by: 15
Author(s): Tingting Jin, Zucheng Jiang, Xiying Luan, Zhuling Qu, Feifei Guo, Shengli Gao, Xu Luo, Xiangrong Sun
Software Mentions: 1
Published: over 5 years ago

10.3389/fonc.2019.01100

A High-Content Screening Approach to Identify MicroRNAs Against Head and Neck Cancer Cell Survival and EMT in an Inflammatory Microenvironment
Cited by: 9
Author(s): Bruno Sangiorgi, Felipe Canto de Souza, Ildercílio Mota de Souza Lima, Josiane Lilian dos Santos Schiavinato, Amanda Cristina Corveloni, Carolina Hassibe Thomé, Wilson A. Silva, Vítor Marcel Faça, Dimas Tadeu Covas, Marco Antônio Zago, Rodrigo Alexandre Panepucci
Software Mentions: 1
Published: about 6 years ago

10.3389/fonc.2018.00446

miR-182 and miR-183 Promote Cell Proliferation and Invasion by Targeting FOXO1 in Mesothelioma
Cited by: 40
Author(s): Rui Suzuki, Vishwa Jeet Amatya, Kei Kushitani, Yuichiro Kai, Takahiro Kambara, Yukio Takeshima
Software Mentions: 1
Published: about 7 years ago

10.3389/fonc.2017.00161

Functional Assay of Cancer Cell Invasion Potential Based on Mechanotransduction of Focused Ultrasound
Cited by: 11
Author(s): Andrew C. Weitz, Nan Sook Lee, Chi Woo Yoon, Adrineh Bonyad, Kyo Suk Goo, Seaok Kim, San Moon, Hayong Jung, Qifa Zhou, Robert H. Chow, K. Kirk Shung
Software Mentions: 1
Published: over 8 years ago

10.3389/fonc.2020.00553

Metabolic Heterogeneity in Patient Tumor-Derived Organoids by Primary Site and Drug Treatment
Cited by: 69
Author(s): Joe T. Sharick, Christine M. Walsh, Carley M. Sprackling, Cheri A. Pasch, Dan Pham, Karla Esbona, Alka Choudhary, Rebeca Garcia-Valera, Mark E. Burkard, Stephanie M. McGregor, Kristina A. Matkowskyj, Alexander A. Parikh, Ingrid M. Meszoely, Mark C. Kelley, Susan Tsai, Dustin A. Deming, Melissa C. Skala
Software Mentions: 1
Published: over 5 years ago

10.3389/fonc.2017.00127

Enhancing the Oncolytic Activity of CD133-Targeted Measles Virus: Receptor Extension or Chimerism with Vesicular Stomatitis Virus Are Most Effective
Cited by: 19
Author(s): Dina Kleinlützum, Julia Hanauer, Alexander Muik, Kay-Martin Hanschmann, Sarah-Katharina Kays, Camilo Ayala-Bretón, Kah-Whye Peng, Michael D. Mühlebach, Tobias Abel, Christian J. Buchholz
Software Mentions: 1
Published: over 8 years ago

10.3389/fphar.2019.00214

A Model of Glucocorticoid Receptor Interaction With Coregulators Predicts Transcriptional Regulation of Target Genes
Cited by: 11
Author(s): Federico Monczor, Antonia Chatzopoulou, Carlos Daniel Zappia, René Houtman, Onno C. Meijer, Carlos P. Fitzsimons
Software Mentions: 1
Published: over 6 years ago

10.3389/fphar.2018.01104

Conventional Anti-glioblastoma Chemotherapy Affects Proteoglycan Composition of Brain Extracellular Matrix in Rat Experimental Model in vivo
Cited by: 17
Author(s): Alexandra Y. Tsidulko, Cynthia Bezier, Gabin de La Bourdonnaye, Anastasia V. Suhovskih, Т. М. Панкова, G. M. Kazanskaya, С. В. Айдагулова, Elvira V. Grigorieva
Software Mentions: 1
Published: about 7 years ago

10.3389/fphar.2019.00619

Network Biology Identifies Novel Regulators of CFTR Trafficking and Membrane Stability
Cited by: 9
Author(s): Cláudia Loureiro, João Dourado Santos, Ana I. Matos, Peter Jordan, Paulo Matos, Carlos M. Farinha, Francisco Pinto
Software Mentions: 1
Published: over 6 years ago

10.3389/fphar.2021.604435

Enhanced Healthspan in Caenorhabditis elegans Treated With Extracts From the Traditional Chinese Medicine Plants Cuscuta chinensis Lam. and Eucommia ulmoides Oliv.
Cited by: 12
Author(s): Shimaa Mohamed Ali Sayed, Karsten Siems, Christian Schmitz‐Linneweber, Walter Luyten, Nadine Saul
Software Mentions: 1
Published: almost 5 years ago

10.3389/fphar.2021.679407

Dynamic Modeling of Mitochondrial Membrane Potential Upon Exposure to Mitochondrial Inhibitors
Cited by: 11
Author(s): Huan Yang, Wanda van der Stel, Randy Lee, Caroline Bauch, Sam Bevan, Paul Walker, Bob van de Water, Erik H.J. Danen, Joost B. Beltman
Software Mentions: 1
Published: over 4 years ago

10.3389/fphar.2019.01303

Applications of Deep-Learning in Exploiting Large-Scale and Heterogeneous Compound Data in Industrial Pharmaceutical Research
Cited by: 35
Author(s): Laurianne David, Josep Arús‐Pous, Johan Karlsson, Ola Engkvist, Esben Jannik Bjerrum, Thierry Kogej, Jan M. Kriegl, Bernd Beck, Hongming Chen
Software Mentions: 1
Published: about 6 years ago

10.3389/fphys.2018.00085

AdipoCount: A New Software for Automatic Adipocyte Counting
Cited by: 27
Author(s): Xu-Hao Zhi, Jiqiu Wang, Peng Lu, Junjing Jia, Hong Shen, Guang Ning
Software Mentions: 1
Published: over 7 years ago

10.3389/fphys.2019.01481

Multiscale Coupling of an Agent-Based Model of Tissue Fibrosis and a Logic-Based Model of Intracellular Signaling
Cited by: 24
Author(s): S. Michaela Rikard, Thomas L. Athey, Anders R. Nelson, Steven L. Christiansen, Jia-Jye Lee, Jeffrey W. Holmes, Shayn M. Peirce, Jeffrey J. Saucerman
Software Mentions: 1
Published: almost 6 years ago

10.3389/fphys.2016.00551

Limits of Applicability of the Voronoi Tessellation Determined by Centers of Cell Nuclei to Epithelium Morphology
Cited by: 47
Author(s): Sara Kaliman, Christina Jayachandran, Florian Rehfeldt, Ana‐Sunčana Smith
Software Mentions: 1
Published: almost 9 years ago

10.3389/fpls.2013.00439

Plant cell shape: modulators and measurements
Cited by: 68
Author(s): Alexander Ivakov, Staffan Persson
Software Mentions: 1
Published: almost 13 years ago

10.1534/g3.115.017830

CYCLoPs: A Comprehensive Database Constructed from Automated Analysis of Protein Abundance and Subcellular Localization Patterns inSaccharomyces cerevisiae
Cited by: 66
Author(s): Judice L.Y. Koh, Yolanda T. Chong, Helena Friesen, Alan M. Moses, Charles Boone, Brenda Andrews, Jason Moffat
Software Mentions: 1
Published: over 10 years ago

10.1534/g3.120.401570

TheCellVision.org: A Database for Visualizing and Mining High-Content Cell Imaging Projects
Cited by: 2
Author(s): Myra Paz David Masinas, Mojca Mattiazzi Ušaj, Matej Ušaj, Charles Boone, Brenda Andrews
Software Mentions: 1
Published: about 5 years ago

10.1038/gt.2016.5

Oncolytic vaccinia virus as a vector for therapeutic sodium iodide symporter gene therapy in prostate cancer
Cited by: 44
Author(s): David Mansfield, Joan Kyula, N Rosenfelder, J Chao-Chu, Gabriela Kramer‐Marek, Aadil Khan, Victoria Roulstone, Martin McLaughlin, Alan Melcher, Richard G. Vile, Hardev Pandha, Vincent Khoo, Kevin Harrington
Software Mentions: 1
Published: almost 10 years ago

10.3390/genes11040347

Assessment of Genotoxicity in Human Cells Exposed to Modulated Electromagnetic Fields of Wireless Communication Devices
Cited by: 7
Author(s): David Schuermann, Christina Ziemann, Zeinab Barekati, Myles Capstick, A. Oertel, Frauke Focke, Manuel Murbach, Niels Kuster, Clemens Dasenbrock, Primo Schär
Software Mentions: 1
Published: over 5 years ago

10.3390/genes11050517

Evidence for Allele-Specific Levels of Enhanced Susceptibility of Wheat mlo Mutants to the Hemibiotrophic Fungal Pathogen Magnaporthe oryzae pv. Triticum
Cited by: 16
Author(s): Katrin Grüner, Tobias Esser, Johanna Acevedo‐Garcia, Matthias Freh, Michael Habig, Roxana Strugala, Eva H. Stukenbrock, Ulrich Schaffrath, Ralph Panstruga
Software Mentions: 1
Published: over 5 years ago

10.1534/genetics.119.302053

Cross Talk with the GAR-3 Receptor Contributes to Feeding Defects in Caenorhabditis elegans eat-2 Mutants
Cited by: 13
Author(s): Alena A. Kozlova, Michelle Lotfi, Peter G. Okkema
Software Mentions: 1
Published: over 6 years ago

10.1186/gb-2006-7-10-r100

Cited by: 4,179
Author(s): Anne E. Carpenter, Thouis R. Jones, Michael R. Lamprecht, Colin Clarke, In Han Kang, Ola Friman, David A. Guertin, Joo Han Chang, Robert A. Lindquist, Jason Moffat, Polina Golland, David M. Sabatini
Software Mentions: 1
Published: almost 20 years ago

10.1186/gb-2014-15-4-r64

Broad metabolic sensitivity profiling of a prototrophic yeast deletion collection
Cited by: 59
Author(s): Benjamin VanderSluis, David Hess, Colin Pesyna, Elias W. Krumholz, Tahin Syed, Balázs Szappanos, Corey Nislow, Balázs Papp, Olga G. Troyanskaya, Chad L. Myers, Amy A. Caudy
Software Mentions: 1
Published: almost 12 years ago

10.1186/2041-9414-3-1

Development and validation of 'AutoRIF': software for the automated analysis of radiation-induced foci
Cited by: 12
Author(s): Andrew McVean, Simon Kent, A. V. Bakanov, Tom R. Hobbs, Rhona M. Anderson
Software Mentions: 1
Published: almost 14 years ago

10.1093/gigascience/giy078

KREAP: an automated Galaxy platform to quantify in vitro re-epithelialization kinetics
Cited by: 3
Author(s): Marcela M. Fernandez-Gutierrez, David B. H. van Zessen, Peter van Baarlen, Michiel Kleerebezem, Andrew Stubbs
Software Mentions: 1
Published: over 7 years ago

10.1002/glia.23562

Low sulfated heparins target multiple proteins for central nervous system repair
Cited by: 17
Author(s): George A. McCanney, Michael A. McGrath, Thomas D. Otto, Richard Burchmore, Edwin A. Yates, Charles D. Bavington, Hugh J. Willison, Jeremy E. Turnbull, Susan C. Barnett
Software Mentions: 1
Published: almost 7 years ago

10.1002/glia.23612

Transforming growth factor‐beta renders ageing microglia inhibitory to oligodendrocyte generation by CNS progenitors
Cited by: 31
Author(s): Roey Baror, Björn Neumann, Michael J. Segel, Kevin J. Chalut, Stephen P.J. Fancy, Dorothy P. Schafer, Robin J.M. Franklin
Software Mentions: 1
Published: over 6 years ago

10.1002/glia.22900

Characterization of glucose‐related metabolic pathways in differentiated rat oligodendrocyte lineage cells
Cited by: 68
Author(s): Ana Amaral Porem Amaral, Mussie Ghezu Hadera, Joana M. Tavares, Mark R. Kotter, Ursula Sonnewald
Software Mentions: 1
Published: about 10 years ago

10.1016/j.heliyon.2018.e00920

Determination of the degree of grain refinement in irradiated U-Mo fuels
Cited by: 3
Author(s): Andrew M. Casella, Douglas E. Burkes, Paul J. MacFarlan, Edgar C. Buck
Software Mentions: 1
Published: almost 7 years ago

10.1007/s00418-018-1757-7

Histological processing of un-/cellularized thermosensitive electrospun scaffolds
Cited by: 10
Author(s): Julia Fuchs, Marc Mueller, Christine Daxböck, Manuela Stückler, Ingrid Lang, Gerd Leitinger, Elisabeth Bock, Amin El‐Heliebi, Gerit Moser, Birgit Glasmacher, Dagmar Brislinger
Software Mentions: 1
Published: almost 7 years ago

10.1111/imm.13343

Regulation of CTLA‐4 recycling by LRBA and Rab11
Cited by: 15
Author(s): Daniel Janman, Claudia Hinze, Alan Kennedy, Neil Halliday, Erin Waters, Cayman Williams, Behzad Rowshanravan, Tie Zheng Hou, Shane Minogue, Omar Qureshi, David M. Sansom
Software Mentions: 1
Published: over 4 years ago

10.1172/jci.insight.134290

MEK activation modulates glycolysis and supports suppressive myeloid cells in TNBC
Cited by: 20
Author(s): David S. Franklin, Joe T. Sharick, Paula I. Ericsson-Gonzalez, Violeta Sánchez, Phillip T. Dean, Susan R. Opalenik, Stefano Cairo, Jean Gabriel Judde, Michael T. Lewis, Jenny C. Chang, Melinda E. Sanders, Rebecca S. Cook, Melissa C. Skala, Jennifer Bordeaux, Jehovana Orozco Bender, Christine Vaupel, Gary Geiss, Douglas Hinerfeld, Justin M. Balko
Software Mentions: 1
Published: over 5 years ago

10.1172/jci.insight.138576

Loss of MAGEL2 in Prader-Willi syndrome leads to decreased secretory granule and neuropeptide production
Cited by: 37
Author(s): Helen Chen, A. Kaitlyn Victor, Jonathon Klein, Klementina Fon Tacer, Derek J.C. Tai, Celine de Esch, Alexander Nuttle, Jamshid Temirov, Lisa C. Burnett, Michael Rosenbaum, Yiying Zhang, Li Ding, James J. Moresco, Jolene K. Diedrich, John R. Yates, Heather Tillman, Rudolph L. Leibel, Michael E. Talkowski, Daniel D. Billadeau, Lawrence T. Reiter, Patrick Ryan Potts
Software Mentions: 1
Published: about 5 years ago

10.1172/jci.insight.148363

Characterization of HNRNPA1 mutations defines diversity in pathogenic mechanisms and clinical presentation
Cited by: 30
Author(s): Danique Beijer, Hong Joo Kim, Lin Guo, Kevin J. O’Donovan, Inès Mademan, Tine Deconinck, Kristof Van Schil, Charlotte M. Fare, Lauren E. Drake, Alice Flynn Ford, Andrzej Kochański, Dagmara Kabzińska, Nicolas Dubuisson, Peter Van den Bergh, Nicol C. Voermans, Richard J.L.F. Lemmers, Silvère M. van der Maarel, Devon Bonner, Jacinda B. Sampson, Matthew T. Wheeler, Anahit Mehrabyan, Steven C. Palmer, Peter De Jonghe, James Shorter, J. Paul Taylor, Jonathan Baets
Software Mentions: 1
Published: over 4 years ago

10.1200/CCI.19.00126

Deep-Learning–Based Characterization of Tumor-Infiltrating Lymphocytes in Breast Cancers From Histopathology Images and Multiomics Data
Cited by: 43
Author(s): Zixiao Lu, Siwen Xu, Wei Shao, Yi Wu, Jie Zhang, Zhi Han, Qianjin Feng, Kun Huang
Software Mentions: 1
Published: about 5 years ago

10.1016/j.jaci.2014.09.006

Prostaglandin D2 and leukotriene E4 synergize to stimulate diverse TH2 functions and TH2 cell/neutrophil crosstalk
Cited by: 46
Author(s): Luzheng Xue, Joannah R. Fergusson, Maryam Salimi, Isabel Panse, James E. Ussher, Ahmed N. Hegazy, Shân L. Vinall, David G. Jackson, Michael Hunter, Roy Pettipher, Graham S. Ogg, Paul Klenerman
Software Mentions: 1
Published: over 10 years ago

10.1186/s40104-020-00481-y

The interplay between non-esterified fatty acids and bovine peroxisome proliferator-activated receptors: results of an in vitro hybrid approach
Cited by: 15
Author(s): Sebastiano Busato, Massimo Bionaz
Software Mentions: 1
Published: over 5 years ago

10.1074/jbc.M117.792754

Role of the E3 ubiquitin ligase RNF157 as a novel downstream effector linking PI3K and MAPK signaling pathways to the cell cycle
Cited by: 15
Author(s): Taner Dogan, Florian Gnad, Jocelyn Chan, Lilian Phu, Amy Young, Jinan Chen, Sophia Doll, Matthew P. Stokes, Marcia Belvin, Lori S. Friedman, Donald S. Kirkpatrick, Klaus P. Hoeflich, Georgia Hatzivassiliou
Software Mentions: 1
Published: about 8 years ago

10.1074/jbc.RA118.002248

Human DHEA sulfation requires direct interaction between PAPS synthase 2 and DHEA sulfotransferase SULT2A1
Cited by: 26
Author(s): Jonathan Wolf Mueller, Jan Idkowiak, Tarsis F. Gesteira, Cecilia Vallet, Rebecca E. Hardman, Johannes van den Boom, Vivek Dhir, Shirley K. Knauer, Edina Rosta, Wiebke Arlt
Software Mentions: 1
Published: over 7 years ago

10.1016/j.jbc.2021.101026

The DNA-binding protein CST associates with the cohesin complex and promotes chromosome cohesion
Cited by: 5
Author(s): P. Logan Schuck, Lauren E. Ball, Jason A. Stewart
Software Mentions: 1
Published: about 4 years ago

10.1186/s13036-019-0222-z

Super-antibiofilm effect of N2 plasma treated buffer (NPB) against plant pathogenic bacterium
Cited by: 1
Author(s): Hyemi Seo, Jisoo Hong, Tae‐Yeol Kim, Won ll Choi, Daekyung Sung, Eunpyo Moon
Software Mentions: 1
Published: almost 6 years ago

10.1117/1.JBO.25.7.071203

Fluorescence lifetime imaging microscopy: fundamentals and advances in instrumentation, analysis, and applications
Cited by: 297
Author(s): Rupsa Datta, Tiffany M. Heaster, Joe T. Sharick, Amani A. Gillette, Melissa C. Skala
Software Mentions: 1
Published: over 5 years ago

10.1117/1.JBO.26.5.056502

Extracellular pH affects the fluorescence lifetimes of metabolic co-factors
Cited by: 9
Author(s): Rebecca Schmitz, Kelsey Tweed, Christine M. Walsh, Alex J. Walsh, Melissa C. Skala
Software Mentions: 1
Published: over 4 years ago

10.1177/1087057110370895

Screening Cellular Feature Measurements for Image-Based Assay Development
Cited by: 17
Author(s): David J. Logan, Anne E. Carpenter
Software Mentions: 1
Published: over 15 years ago

10.1002/jbio.201960050

Classifying T cell activity in autofluorescence intensity images with convolutional neural networks
Cited by: 17
Author(s): Zijie Wang, Alex J. Walsh, Melissa C. Skala, Anthony Gitter
Software Mentions: 1
Published: almost 6 years ago

10.3390/jcdd8030028

PDGFRα: Expression and Function during Mitral Valve Morphogenesis
Cited by: 6
Author(s): Kelsey Moore, Diana Fulmer, Lilong Guo, Natalie Koren, Janiece Glover, Reece Moore, Cortney Gensemer, Tyler Beck, Jordan Morningstar, Rebecca Stairley, Russell A. Norris
Software Mentions: 1
Published: over 4 years ago

10.1083/jcb.202008158

High-content imaging-based pooled CRISPR screens in mammalian cells
Cited by: 47
Author(s): Xiao‐Wei Yan, Nico Stuurman, Sylvie Ribeiro, Marvin E. Tanenbaum, Max A. Horlbeck, Christina R Liem, Marco Jost, Jonathan S. Weissman, Ronald D. Vale
Software Mentions: 1
Published: almost 5 years ago

10.1242/jcs.157354

N-terminal acetylation and replicative age affect proteasome localization and cell fitness during aging
Cited by: 35
Author(s): Sjoerd van Deventer, Victoria Menéndez‐Benito, Fred van Leeuwen, Jacques Neefjes
Software Mentions: 1
Published: almost 12 years ago

10.1242/jcs.140020

SMCHD1 accumulates at DNA damage sites and facilitates the repair of DNA double-strand breaks
Cited by: 17
Author(s): Heather Coker, Neil Brockdorff
Software Mentions: 1
Published: over 11 years ago

10.1242/jcs.169441

Genome-wide RNAi screen for nuclear actin reveals a network of cofilin regulators
Cited by: 31
Author(s): Joseph Dopie, Eeva Kaisa Rajakylä, Merja Joensuu, Guillaume Huet, Evelina Ferrantelli, Tiao Xie, Harri Jäälinoja, Eija Jokitalo, Maria K. Vartiainen
Software Mentions: 1
Published: over 10 years ago

10.1242/jcs.182188

DICER, DROSHA and DNA damage-response RNAs are necessary for the secondary recruitment of DNA damage response factors
Cited by: 83
Author(s): Sofia Francia, Matteo Cabrini, Valentina Matti, Amanda Oldani, Fabrizio d’Adda di Fagagna
Software Mentions: 1
Published: almost 10 years ago

10.1242/jcs.211664

Mitotic spindle assembly and γ-tubulin localisation depend on the integral nuclear membrane protein, Samp1
Cited by: 19
Author(s): Veronica Larsson, Mohammed Hakim Jafferali, Balaje Vijayaraghavan, Ricardo Figueroa, Einar Hallberg
Software Mentions: 1
Published: almost 8 years ago

10.1242/jcs.222349

Synthetic lethality of cytolytic HSV-1 in cancer cells with ATRX and PML deficiency
Cited by: 18
Author(s): Mingqi Han, Christine E. Napier, Sonja Frölich, Erdahl Teber, Ted Wong, Jane R. Noble, Eugene Ho Yan Choi, Roger D. Everett, Anthony J. Cesare, Roger R. Reddel
Software Mentions: 1
Published: almost 7 years ago

10.1242/jcs.229252

New roles for the de-ubiquitylating enzyme OTUD4 in an RNA-protein network and RNA granules
Cited by: 12
Author(s): Richa Das, Lukas Schwintzer, Stanislav Vinopal, Eva Aguado Roca, Marc Sylvester, Ana-Maria Oprişoreanu, Susanne Schoch, Frank Bradke, Meike Broemer
Software Mentions: 1
Published: almost 7 years ago

10.3390/jcm8070911

Morphological State Transition Dynamics in EGF-Induced Epithelial to Mesenchymal Transition
Cited by: 38
Author(s): Vimalathithan Devaraj, Biplab Bose
Software Mentions: 1
Published: over 6 years ago

10.1017/cts.2017.202

2098
Cited by: 0
Author(s): Hansjörg Schwertz, Jesse W. Rowley, Larry W. Kraiss, John V. Moran, Robert A. Campbell, Guy A. Zimmerman, Andrew S. Weyrich, Matthew T. Rondina, Gerald G. Schumann, Ulrike Thorack
Software Mentions: 1
Published: about 8 years ago

10.1016/j.kint.2020.05.040

The phosphoinositide 3-kinase inhibitor alpelisib restores actin organization and improves proximal tubule dysfunction in vitro and in a mouse model of Lowe syndrome and Dent disease
Cited by: 13
Author(s): Marine Berquez, Jonathan R Gadsby, Beatrice Paola Festa, Richard J. Butler, Stephen Jackson, Valeria Berno, Alessandro Luciani, Olivier Devuyst, Jennifer L. Gallop
Software Mentions: 1
Published: about 5 years ago

10.1002/osp4.396

Reduction of IL‐6 gene expression in human adipose tissue after sleeve gastrectomy surgery
Cited by: 7
Author(s): Isabel Casimiro, Erin C. Hanlon, Jeremy White, Avelino De Leon, Ruby Ross, Katiannah Moise, Matthew J. Piron, Matthew J. Brady
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.ppat.1000227

Dynamic, Morphotype-Specific Candida albicans β-Glucan Exposure during Infection and Drug Treatment
Cited by: 273
Author(s): Robert T. Wheeler, Diana Kombe, Sudeep D. Agarwala, Gerald R. Fink
Software Mentions: 1
Published: almost 17 years ago

10.1371/journal.ppat.1002316

Histone Deacetylase 8 Is Required for Centrosome Cohesion and Influenza A Virus Entry
Cited by: 68
Author(s): Yohei Yamauchi, Heithem Boukari, Indranil Banerjee, Ivo F. Sbalzarini, Péter Horváth, Ari Helenius
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.ppat.1002810

Near Surface Swimming of Salmonella Typhimurium Explains Target-Site Selection and Cooperative Invasion
Cited by: 110
Author(s): Benjamin Misselwitz, Naomi Barrett, Saskia Kreibich, Pascale Vonaesch, Daniel Andritschke, Rout Samuel, Kerstin Weidner, Miloš Šormaz, Pascal Songhet, Péter Horváth, Mamta Chabria, Viola Vogel, Doris M. Spori, Patrick Jenny, Wolf‐Dietrich Hardt
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.ppat.1002976

Niclosamide Is a Proton Carrier and Targets Acidic Endosomes with Broad Antiviral Effects
Cited by: 193
Author(s): Andreas Jurgeit, Robert S. McDowell, Stefan Moese, Eric Meldrum, Reto A. Schwendener, Urs F. Greber
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.ppat.1003536

Post-Translational Control of IL-1β via the Human Papillomavirus Type 16 E6 Oncoprotein: A Novel Mechanism of Innate Immune Escape Mediated by the E3-Ubiquitin Ligase E6-AP and p53
Cited by: 103
Author(s): Martina Niebler, Xu Qian, Daniela Höfler, Vlada Kogosov, Jittranan Kaewprag, Andreas M. Kaufmann, Regina Ly, Gerd Böhmer, Rainer Zawatzky, Frank Rösl, Bladimiro Rincón-Orozco
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.ppat.1003737

The Inflammatory Kinase MAP4K4 Promotes Reactivation of Kaposi's Sarcoma Herpesvirus and Enhances the Invasiveness of Infected Endothelial Cells
Cited by: 31
Author(s): Darya A. Haas, Kiran Bala, Guntram Büsche, Magdalena Weidner-Glunde, Susann Santag, Semra Kati, Silvia Gramolelli, Modester Damas, Oliver Dittrich‐Breiholz, Michael Kracht, Jessica Rückert, Zoltán Varga, Gÿorgý Kéri, Thomas F. Schulz
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.ppat.1003771

Antibodies Trap Tissue Migrating Helminth Larvae and Prevent Tissue Damage by Driving IL-4Rα-Independent Alternative Differentiation of Macrophages
Cited by: 96
Author(s): Julia Esser‐von Bieren, Ilaria Mosconi, Romain Guiet, Alessandra Piersgilli, Beatrice Volpe, Feifei Chen, William C. Gause, Arne Seitz, J. Sjef Verbeek, Nicola L. Harris
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.ppat.1003946

Identification of Host-Targeted Small Molecules That Restrict Intracellular Mycobacterium tuberculosis Growth
Cited by: 212
Author(s): Sarah A. Stanley, Amy K. Barczak, Melanie R. Silvis, Samantha S. Luo, Kimberly M. Sogi, Martha S. Vokes, Mark-Anthony Bray, Anne E. Carpenter, Christopher Moore, Noman Siddiqi, Eric J. Rubín, Deborah T. Hung
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.ppat.1004013

Identification of OmpA, a Coxiella burnetii Protein Involved in Host Cell Invasion, by Multi-Phenotypic High-Content Screening
Cited by: 111
Author(s): Eric Martínez, Franck Cantet, L. Fava, Isobel H. Norville, Matteo Bonazzi
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.ppat.1004162

Large Scale RNAi Reveals the Requirement of Nuclear Envelope Breakdown for Nuclear Import of Human Papillomaviruses
Cited by: 123
Author(s): Inci Aydin, Susanne N. Weber, Berend Snijder, Pilar Samperio Ventayol, Andreas Kühbacher, Miriam Becker, Patricia M. Day, John T. Schiller, Michael Kann, Lucas Pelkmans, Ari Helenius, Mario Schelhaas
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.ppat.1004390

Crimean-Congo Hemorrhagic Fever Virus Entry into Host Cells Occurs through the Multivesicular Body and Requires ESCRT Regulators
Cited by: 45
Author(s): Olena Shtanko, Raisa A. Nikitina, Cengiz Z. Altuntas, А. А. Чепурнов, Robert A. Davey
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.ppat.1004530

Rubella Virus: First Calcium-Requiring Viral Fusion Protein
Cited by: 52
Author(s): Mathieu Dubé, F.A. Rey, Margaret Kielian
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.ppat.1004778

Immune Antibodies and Helminth Products Drive CXCR2-Dependent Macrophage-Myofibroblast Crosstalk to Promote Intestinal Repair
Cited by: 27
Author(s): Julia Esser‐von Bieren, Bruce T. Volpe, Duncan B. Sutherland, Jérôme Bürgi, J. Sjef Verbeek, Benjamin J. Marsland, Joseph F. Urban, Nicola L. Harris
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.ppat.1005058

Utilizing Chemical Genomics to Identify Cytochrome b as a Novel Drug Target for Chagas Disease
Cited by: 47
Author(s): Shilpi Khare, Steven L. Roach, S. Whitney Barnes, Dominic Hoepfner, John R. Walker, Arnab K. Chatterjee, R. Jeffrey Neitz, Michelle R. Arkin, Case W. McNamara, Jaime Ballard, Yin Hwa Lai, Yue Fu, Valentina Molteni, Vince S. C. Yeh, James H. McKerrow, Richard Glynne, Frantisek Supek
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.ppat.1005403

Gliding Associated Proteins Play Essential Roles during the Formation of the Inner Membrane Complex of Toxoplasma gondii
Cited by: 57
Author(s): Clare R. Harding, Saskia Egarter, Matthew Gow, Elena Jiménez-Ruiz, David Ferguson, Markus Meissner
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.ppat.1005568

ABHD5/CGI-58, the Chanarin-Dorfman Syndrome Protein, Mobilises Lipid Stores for Hepatitis C Virus Production
Cited by: 25
Author(s): Gabrielle Vièyres, Kathrin Welsch, Gisa Gerold, Juliane Gentzsch, Sina Kahl, Florian W. R. Vondran, Lars Kaderali, Thomas Pietschmann
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.ppat.1005602

Macropinosomes are Key Players in Early Shigella Invasion and Vacuolar Escape in Epithelial Cells
Cited by: 83
Author(s): Allon Weiner, Nora Mellouk, Noelia López-Montero, Yuen-Yan Chang, Célia Souque, Christine Schmitt, Jost Enninga
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.ppat.1005669

Leishmania amazonensis Engages CD36 to Drive Parasitophorous Vacuole Maturation
Cited by: 39
Author(s): Kendi Okuda, Mei Song Tong, Dempsey Brian, Kathryn J. Moore, Ricardo T. Gazzinelli, Neal S. Silverman
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.ppat.1006224

ALPK1 controls TIFA/TRAF6-dependent innate immunity against heptose-1,7-bisphosphate of gram-negative bacteria
Cited by: 84
Author(s): Milica Milivojevic, Anne‐Sophie Dangeard, Christoph Kasper, Therese Tschon, Mario Emmenlauer, Claudine Pique, Pamela Schnupf, Julie Guignot, Cécile Arrieumerlou
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.ppat.1006308

A central region in the minor capsid protein of papillomaviruses facilitates viral genome tethering and membrane penetration for mitotic nuclear entry
Cited by: 51
Author(s): Inci Aydin, Ruth Villalonga-Planells, Lilo Greune, Matthew P. Bronnimann, Christine M. Calton, Miriam Becker, Kun Lai, Samuel K. Campos, M. Alexander Schmidt, Mario Schelhaas
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.ppat.1006363

Systematic, multiparametric analysis of Mycobacterium tuberculosis intracellular infection offers insight into coordinated virulence
Cited by: 86
Author(s): Amy K. Barczak, Roi Avraham, Shantanu Singh, Samantha S. Luo, Wei Ran Zhang, Mark-Anthony Bray, Amelia E Hinman, Matthew P. Thompson, Raymond M. Nietupski, Aaron Golas, P.C. Montgomery, Michael G. FitzGerald, Roger S. Smith, Dylan W. White, Anna D. Tischler, Anne E. Carpenter, Deborah T. Hung
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.ppat.1006823

Importin α1 is required for nuclear import of herpes simplex virus proteins and capsid assembly in fibroblasts and neurons
Cited by: 30
Author(s): Katinka Döhner, Ana Ramos-Nascimento, Dagmara Bialy, Fenja Anderson, Ana Hickford-Martinez, Franziska Rother, Thalea Koithan, Kathrin Rudolph, Anna Buch, Ute Prank, Anne Binz, Stefanie Hügel, Robert Jan Lebbink, Rob C. Hoeben, Enno Hartmann, Michael Bäder, Rudolf Bauerfeind, Beate Sodeik
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.ppat.1006874

Lipid droplet formation in Mycobacterium tuberculosis infected macrophages requires IFN-γ/HIF-1α signaling and supports host defense
Cited by: 142
Author(s): Matthew Knight, Jonathan Braverman, Kaleb Asfaha, Karsten Gronert, Sarah A. Stanley
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.ppat.1006914

Lung macrophage scavenger receptor SR-A6 (MARCO) is an adenovirus type-specific virus entry receptor
Cited by: 56
Author(s): Nicole Stichling, Maarit Suomalainen, Justin W. Flatt, Markus Schmid, Martin Pačesa, Silvio Hemmi, Wolfgang Jungraithmayr, Mareike D. Maler, Marina A. Freudenberg, Andreas Plückthun, Tobias May, Mario Köster, György Fejér, Urs F. Greber
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.ppat.1007842

Separate domains of G3BP promote efficient clustering of alphavirus replication complexes and recruitment of the translation initiation machinery
Cited by: 44
Author(s): Benjamin Götte, Marc D. Panas, Kirsi Hellström, Lifeng Liu, Baila Samreen, Ola Larsson, Tero Ahola, Gerald M. McInerney
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.ppat.1009018

Defensin-driven viral evolution
Cited by: 8
Author(s): Karina Diaz, Ciara T Hu, Youngmee Sul, Beth A. Bromme, Nicolle D. Myers, Ksenia V. Skorohodova, Anshu P. Gounder, Jason G. Smith
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.ppat.1008548

Bartonella effector protein C mediates actin stress fiber formation via recruitment of GEF-H1 to the plasma membrane
Cited by: 9
Author(s): Simon Marlaire, Christoph Dehio
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.ppat.1009310

Uropathogenic E. coli induces DNA damage in the bladder
Cited by: 18
Author(s): Camille V. Chagneau, Clémence Massip, Nadège Bossuet-Greif, Christophe Fremez, Jean-Paul Motta, Ayaka Shima, Céline Besson, Pauline Le Faouder, Nicolas Cénac, Marie‐Paule Roth, Hélène Coppin, Maxime Fontanié, Patricia Martín, Jean-Philippe Nougayrède, Éric Oswald
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.ppat.1009771

CD97 stabilises the immunological synapse between dendritic cells and T cells and is targeted for degradation by the Salmonella effector SteD
Cited by: 13
Author(s): Ondřej Černý, Camilla Godlee, Romina Tocci, Nancy E. Cross, Haoran Shi, James C Williamson, Eric Alix, Paul J. Lehner, David W. Holden
Software Mentions: 1
Published: over 4 years ago

10.1155/2017/7097450

2,4-Thiazolidinedione Treatment Improves the Innate Immune Response in Dairy Goats with Induced Subclinical Mastitis
Cited by: 15
Author(s): Fernanda Rosa, J. S. Osorio, Erminio Trevisi, Francisco Yanqui-Rivera, Charles T. Estill, Massimo Bionaz
Software Mentions: 1
Published: almost 9 years ago

10.3390/polym12091992

Enhanced Antibiofilm Effects of N2 Plasma-Treated Buffer Combined with Antimicrobial Hexapeptides Against Plant Pathogens
Cited by: 3
Author(s): Bohyun Kim, Hyemi Seo, Jin Hyung Lee, Sung-Hyun Kim, Won Il Choi, Daekyung Sung, Eunpyo Moon
Software Mentions: 1
Published: about 5 years ago

10.1073/pnas.1905787116

The microbiota regulates murine inflammatory responses to toxin-induced CNS demyelination but has minimal impact on remyelination
Cited by: 24
Author(s): Christopher E McMurran, Alerie Guzman de la Fuente, Rosana Peñalva, Ofra Ben Menachem-Zidon, Yvonne Dombrowski, John Falconer, Ginez A. González, Chao Zhao, Fynn N. Krause, Adam M. H. Young, Julian L. Griffin, Clare A. Jones, Claire Hollins, Markus M. Heimesaat, Denise Fitzgerald, R. J. M. Franklin
Software Mentions: 1
Published: about 6 years ago

10.1073/pnas.1912307117

Robust hepatitis E virus infection and transcriptional response in human hepatocytes
Cited by: 57
Author(s): Daniel Todt, Martina Friesland, Nora Moeller, Dimas Praditya, Volker Kinast, Yannick Brüggemann, Leonard Knegendorf, Thomas Burkard, Joerg Steinmann, Rani Burm, Lieven Verhoye, Avista Wahid, Toni Luise Meister, Michael Engelmann, Vanessa Maria Pfankuche, Christina Puff, Florian W. R. Vondran, Wolfgang Baumgärtner, Philip Meuleman, Patrick Behrendt, Eike Steinmann
Software Mentions: 1
Published: almost 6 years ago

10.1073/pnas.2012854118

GRK5 is a regulator of fibroblast activation and cardiac fibrosis
Cited by: 27
Author(s): Akito Eguchi, Ryan C. Coleman, Kenneth S. Gresham, Erhe Gao, Jessica Ibetti, J. Kurt Chuprun, Walter J. Koch
Software Mentions: 1
Published: almost 5 years ago

10.1073/pnas.2019622118

Drosophila Sex Peptide controls the assembly of lipid microcarriers in seminal fluid
Cited by: 12
Author(s): S. Mark Wainwright, Ben R. Hopkins, Cláudia C. Mendes, Aashika Sekar, Benjamin Kroeger, Hellberg Jeeu., Fan S-J., Abigail Pavey, Pauline Marie, Aaron Leiblich, Irem Sepil, P. David Charles, Marie‐Laëtitia Thézénas, Román Fischer, Benedikt M. Kessler, Carina Gandy, Laura Corrigan, Raf Patel, Stuart Wigby, John F. Morris, Goberdhan Dci., Clive Wilson
Software Mentions: 1
Published: almost 5 years ago

10.1073/pnas.2021342118

CD20 as a gatekeeper of the resting state of human B cells
Cited by: 44
Author(s): Kathrin Kläsener, Julia Jellusova, Geoffroy Andrieux, Ulrich Salzer, Chiara Böhler, Sebastian N. Steiner, Jonas B. Albinus, Marco Cavallari, Beatrix Süß, Reinhard Voll, Melanie Boerries, Bernd Wollscheid, Michael Reth
Software Mentions: 1
Published: almost 5 years ago

10.1073/pnas.2021586118

Visualizing active viral infection reveals diverse cell fates in synchronized algal bloom demise
Cited by: 46
Author(s): Flora Vincent, Uri Sheyn, Ziv Porat, Daniella Schatz, Assaf Vardi
Software Mentions: 1
Published: over 4 years ago

10.1073/pnas.2023157118

ORF10–Cullin-2–ZYG11B complex is not required for SARS-CoV-2 infection
Cited by: 24
Author(s): Elijah L. Mena, Callie J. Donahue, Laura Pontano Vaites, Jie Li, Gergely Róna, Colin O’Leary, Luca Lignitto, Bearach Miwatani-Minter, João A. Paulo, Avantika Dhabaria, Beatrix Ueberheide, Steven P. Gygi, Michele Pagano, J. Wade Harper, Robert A. Davey, Stephen J. Elledge
Software Mentions: 1
Published: over 4 years ago

10.1073/pnas.2025053118

ALS- and FTD-associated missense mutations in TBK1 differentially disrupt mitophagy
Cited by: 45
Author(s): Olivia Harding, Chantell S. Evans, Junqiang Ye, Jonah Cheung, Tom Maniatis, Erika L.F. Holzbaur
Software Mentions: 1
Published: over 4 years ago

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