pypi: CellProfiler | Projects | Ecosyste.ms: Papers

10.1186/s13550-020-00663-9

Radiobiological and dosimetric assessment of DNA-intercalated 99mTc-complexes bearing acridine orange derivatives
Cited by: 8
Author(s): A. Belchior, Salvatore Di Maria, Célia Fernandes, P. Vaz, António Paulo, Paula Raposinho
Software Mentions: 1
Published: about 5 years ago

10.1186/s13550-021-00802-w

In vitro proof of concept studies of radiotoxicity from Auger electron-emitter thallium-201
Cited by: 8
Author(s): Katarzyna M. Osytek, Philip J. Blower, Inês Costa, Gareth E. Smith, Vincenzo Abbate, Samantha Y.A. Terry
Software Mentions: 1
Published: about 4 years ago

10.15252/embj.201797677

<scp>HP</scp> 1α targets the chromosomal passenger complex for activation at heterochromatin before mitotic entry
Cited by: 36
Author(s): Jan Gustav Ruppert, Kumiko Samejima, Melpomeni Platani, Òscar Molina, Hiroshi Kimurâ, A. Arockia Jeyaprakash, Sachio Ohta
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-020-74080-2

Multivalent tumor suppressor adenomatous polyposis coli promotes Axin biomolecular condensate formation and efficient β-catenin degradation
Cited by: 12
Author(s): Tie-Mei Li, Jing Ren, Dylan Husmann, John P. Coan, Or Gozani, Katrin F. Chua
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-75779-y

Tamoxifen induces hypercoagulation and alterations in ERα and ERβ dependent on breast cancer sub-phenotype ex vivo
Cited by: 5
Author(s): Kyrtania Pather, Tanya N. Augustine
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-78015-9

Generation of immune cell containing adipose organoids for in vitro analysis of immune metabolism
Cited by: 16
Author(s): Jacqueline Taylor, Julia Sellin, Lars Kuerschner, Lennart Krähl, Yasmin Majlesain, Irmgard Förster, Christoph Thiele, E. Weber
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-78432-w

Mammary epithelial morphogenesis in 3D combinatorial microenvironments
Cited by: 3
Author(s): Raphaëlle Luisier, Mehmet Girgin, Matthias P. Lütolf, Adrian Ranga
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-79966-9

Outer membrane vesicles containing OmpA induce mitochondrial fragmentation to promote pathogenesis of Acinetobacter baumannii
Cited by: 41
Author(s): Varnesh Tiku, Eric M. Kofoed, Donghong Yan, Jing Kang, Min Xu, Mike Reichelt, Ivan Đikić, Man‐Wah Tan
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-79637-9

TEM, SEM, and STEM-based immuno-CLEM workflows offer complementary advantages
Cited by: 9
Author(s): Viola Oorschot, Benjamin W. Lindsey, Jan Kaslin, Georg Ramm
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-81054-5

Self-agglomerated collagen patterns govern cell behaviour
Cited by: 7
Author(s): Aysegul Dede Eren, E. Eren, Twan J. S. Wilting, Jan de Boer, Hanneke Gelderblom, Jasper Foolen
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-82140-4

Imaging of photoacoustic-mediated permeabilization of giant unilamellar vesicles (GUVs)
Cited by: 9
Author(s): Diogo A. Pereira, Alexandre D. Silva, Patrícia A. T. Martins, Ana P. Piedade, Dmitro Martynowych, David Veysset, Maria João Moreno, Carlos Serpa, Keith A. Nelson, Luis Arnaut
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-82985-9

Estimation of three-dimensional chromatin morphology for nuclear classification and characterisation
Cited by: 3
Author(s): Priyanka Rana, Arcot Sowmya, Erik Meijering, Yang Song
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-82917-7

Small molecule inhibitor of OGG1 blocks oxidative DNA damage repair at telomeres and potentiates methotrexate anticancer effects
Cited by: 17
Author(s): Juan Miguel Baquero, Carlos Benitéz‐Buelga, Varshni Rajagopal, Zhiyao Zhao, Raúl Torres-Ruíz, Sarah Müller, Bishoy Hanna, Olga Loseva, Olov Wallner, Maurice Michel, Sandra Rodríguez‐Perales, Helge Gad, Torkild Visnes, Thomas Helleday, Javier Benı́tez, Ana Osorio
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-83740-w

Human induced pluripotent stem cell-based platform for modeling cardiac ischemia
Cited by: 17
Author(s): Martta Häkli, Joose Kreutzer, Antti-Juhana Mäki, Hannu Välimäki, Henna Lappi, Heini Huhtala, Pasi Kallio, Katriina Aalto‐Setälä, Mari Pekkanen-Mattila
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-83537-x

Quantitative phase microscopy for non-invasive live cell population monitoring
Cited by: 18
Author(s): Shérazade Aknoun, Manuel Yonnet, Zied Djabari, Fanny Graslin, Mark Taylor, Thierry Pourcher, Wattellier Benoit, Philippe Pognonec
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-86315-x

IL-1β mediated nanoscale surface clustering of integrin α5β1 regulates the adhesion of mesenchymal stem cells
Cited by: 2
Author(s): Stephanie A. Maynard, Ekaterina Pchelintseva, Limor Zwi‐Dantsis, Anika Nagelkerke, Sahana Gopal, Yuri Korchev, Andrew Shevchuk, Molly M. Stevens
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-86549-9

An improved biolistic delivery and analysis method for evaluation of DNA and CRISPR-Cas delivery efficacy in plant tissue
Cited by: 16
Author(s): Kyle Miller, Alan L. Eggenberger, Keunsub Lee, Fei Liu, Minjeong Kang, Madison Drent, Andrew Ruba, Tyler Kirscht, Kan Wang, Shan Jiang
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-88512-0

The Nek2 centrosome-mitotic kinase contributes to the mesenchymal state, cell invasion, and migration of triple-negative breast cancer cells
Cited by: 17
Author(s): Yainyrette Rivera-Rivera, Mihaela Marina, Shirley Jusino, Mi-Young Lee, Jaleisha Vélez Velázquez, Camille Chardón-Colón, Geraldine Vargas, Jaya Padmanabhan, Srikumar Chellappan, Harold I. Saavedra
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-88497-w

Saccharomyces boulardii modulates oxidative stress and renin angiotensin system attenuating diabetes-induced liver injury in mice
Cited by: 8
Author(s): Leticia Barssotti, Isabel Cristina Mallostro Emerich de Abreu, Ana Beatriz Pereira Brandão, Raquel Cristina Melo Ferreira de Albuquerque, Flávia Regina Ferreira, Miguel Angel Castillo Salgado, Danielle da Silva Dias, Kátia De Angelis, Rodrigo Yokota, Dulce Elena Casarini, Lívia Bruni de Souza, Carla Romano Taddei, Tatiana Sousa Cunha
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-021-88966-2

Automatic wavelet-based 3D nuclei segmentation and analysis for multicellular embryo quantification
Cited by: 3
Author(s): Tzu‐Ching Wu, Xu Wang, Linlin Li, Ye Bu, David M. Umulis
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-021-90252-0

Antimicrobial responses of peripheral and central nervous system glia against Staphylococcus aureus
Cited by: 3
Author(s): Indra N. Choudhury, Anu Chacko, Ali Delbaz, Mo Chen, Souptik Basu, James Anthony St John, Flavia Huygens, Jenny Ekberg
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-021-90701-w

Viral fibrotic scoring and drug screen based on MAPK activity uncovers EGFR as a key regulator of COVID-19 fibrosis
Cited by: 28
Author(s): Elmira Vagapova, Timofey Lebedev, Vladimir Prassolov
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-021-94217-1

SpheroidPicker for automated 3D cell culture manipulation using deep learning
Cited by: 11
Author(s): István Grexa, Ákos Diósdi, Mária Harmati, András Kriston, Nikita Moshkov, Krisztina Buzás, Vilja Pietiäinen, Krisztián Koós, Péter Horváth
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-021-94225-1

Rapid in vitro quantification of TDP-43 and FUS mislocalisation for screening of gene variants implicated in frontotemporal dementia and amyotrophic lateral sclerosis
Cited by: 4
Author(s): Lisa J. Oyston, Stephanie Ubiparipovic, Lauren Fitzpatrick, Marianne Hallupp, Lauren Boccanfuso, John B. Kwok, Carol Dobson‐Stone
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-021-95344-5

Acute ischemic stroke triggers a cellular senescence-associated secretory phenotype
Cited by: 18
Author(s): Coral Torres, Pascual Torres, Noemí Vidal, Manel Portero-Otı́n, Glòria Arqué, Francisco Purroy
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-021-97148-z

Mitochondria-affecting small molecules ameliorate proteostasis defects associated with neurodegenerative diseases
Cited by: 11
Author(s): Elissa Tjahjono, Jingqi Pei, Alexey V. Revtovich, Terri-Jeanne E. Liu, Alisha Swadi, Maria C. Hancu, Joe G. Tolar, Natalia V. Kirienko
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-021-97460-8

Amine modification of calcium phosphate by low-pressure plasma for bone regeneration
Cited by: 4
Author(s): Joe Kodama, Anjar Anggraini Harumningtyas, Tomoko Ito, Miroslav Michlíček, Satoshi Sugimoto, Hidekazu Kita, Ryota Chijimatsu, Yuichiro Ukon, Junichi Kushioka, Rintaro Okada, Takashi Kamatani, Kunihiko Hashimoto, Daisuke Tateiwa, Hiroyuki Tsukazaki, Shinichi Nakagawa, Shota Takenaka, Takahiro Makino, Yusuke Sakai, David Nečas, Lenka Zajı́čková, Satoshi Hamaguchi, Takashi Kaito
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-021-97327-y

Regulation of low-density lipoprotein receptor expression in triple negative breast cancer by EGFR-MAPK signaling
Cited by: 7
Author(s): Tiffany Scully, Nathan Kase, Emily J. Gallagher
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-021-97539-2

Dietary tomato inhibits angiogenesis in TRAMP prostate cancer but is not protective with a Western-style diet in this pilot study
Cited by: 1
Author(s): Catherine C. Applegate, Matthew R. Lowerison, Emma Hambley, Pengfei Song, Matthew A. Wallig, John W. Erdman
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-021-97820-4

Robust neuronal differentiation of human iPSC-derived neural progenitor cells cultured on densely-spaced spiky silicon nanowire arrays
Cited by: 7
Author(s): Jann Harberts, Malte Siegmund, Matteo Schnelle, Ting Zhang, Yakui Lei, Linwei Yu, Robert Zierold, Robert H. Blick
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41598-021-98627-z

Adipose expression of CREB3L3 modulates body weight during obesity
Cited by: 2
Author(s): Maximilian McCann, Yanliang Li, Marcos D Muñoz, Victoria Gil, Guifen Qiang, José Córdoba-Chacón, Matthias Blüher, Stephen A. Duncan, Chong Wee Liew
Software Mentions: 1
Published: almost 4 years ago

10.1088/1468-6996/16/3/034608

Cellular uptake and cell-to-cell transfer of polyelectrolyte microcapsules within a triple co-culture system representing parts of the respiratory tract
Cited by: 10
Author(s): D. Kühn, Raimo Hartmann, Kleanthis Fytianos, Alke Petri‐Fink, Barbara Rothen‐Rutishauser, Wolfgang J. Parak
Software Mentions: 1
Published: about 10 years ago

10.1080/14686996.2020.1808432

A simple in vitro biomimetic perfusion system for mechanotransduction study
Cited by: 3
Author(s): Ruikang Xue, Sarah H. Cartmell
Software Mentions: 1
Published: over 5 years ago

10.3390/s131114511

Temporal and Spatial Properties of a Yeast Multi-Cellular Amplification System Based on Signal Molecule Diffusion
Cited by: 5
Author(s): Michael Jahn, Annett Mölle, Gerhard Rödel, Kai Ostermann
Software Mentions: 1
Published: almost 12 years ago

10.3390/s18020602

Calcium Imaging of GPCR Activation Using Arrays of Reverse Transfected HEK293 Cells in a Microfluidic System
Cited by: 2
Author(s): Margriet Roelse, Maurice Henquet, H. A. Verhoeven, N.C.A. de Ruijter, Ron Wehrens, Marco S van Lenthe, Renger F. Witkamp, Robert D. Hall, Maarten A. Jongsma
Software Mentions: 1
Published: over 7 years ago

10.3390/s20164409

Automatic Detection Method for Cancer Cell Nucleus Image Based on Deep-Learning Analysis and Color Layer Signature Analysis Algorithm
Cited by: 13
Author(s): Hsing‐Hao Su, Hung‐Wei Pan, Chuan‐Pin Lu, Jyun-Jie Chuang, Tsan Yang
Software Mentions: 1
Published: almost 5 years ago

10.1186/s13395-018-0178-6

Automated muscle histopathology analysis using CellProfiler
Cited by: 27
Author(s): Yeh Siang Lau, Li Xu, Yandi Gao, Renzhi Han
Software Mentions: 1
Published: almost 7 years ago

10.1186/s13395-018-0186-6

Open-CSAM, a new tool for semi-automated analysis of myofiber cross-sectional area in regenerating adult skeletal muscle
Cited by: 43
Author(s): Thibaut Desgeorges, Sophie Liot, Solene Lyon, Jessica Bouvière, Alix Kemmel, Aurélie Trignol, D. Rousseau, Bruno Chapuis, Julien Gondin, Rémi Mounier, Bénédicte Chazaud, Gaëtan Juban
Software Mentions: 1
Published: over 6 years ago

10.1186/s13029-016-0048-8

Implementation of the Rank-Weighted Co-localization (RWC) algorithm in multiple image analysis platforms for quantitative analysis of microscopy images
Cited by: 4
Author(s): Vasanth Singan, Jeremy C. Simpson
Software Mentions: 1
Published: over 9 years ago

10.1016/j.stemcr.2015.11.014

High-Content Analysis of CRISPR-Cas9 Gene-Edited Human Embryonic Stem Cells
Cited by: 22
Author(s): Jared Carlson-Stevermer, Madelyn Goedland, Benjamin Steyer, Arezoo Movaghar, Liang Meng, Lucille Kohlenberg, Ryan Prestil, Krishanu Saha
Software Mentions: 1
Published: over 9 years ago

10.1016/j.stemcr.2017.05.033

NODAL Secures Pluripotency upon Embryonic Stem Cell Progression from the Ground State
Cited by: 69
Author(s): Carla Mulas, Tüzer Kalkan, Austin Smith
Software Mentions: 1
Published: about 8 years ago

10.1016/j.stemcr.2019.02.003

Quantitative Analysis of Intracellular Ca2+ Release and Contraction in hiPSC-Derived Vascular Smooth Muscle Cells
Cited by: 13
Author(s): Oleh V. Halaidych, Amy Cochrane, Francijna E. van den Hil, Christine L. Mummery, Valeria V. Orlova
Software Mentions: 1
Published: over 6 years ago

10.1016/j.stemcr.2019.05.003

Differentiation and Functional Comparison of Monocytes and Macrophages from hiPSCs with Peripheral Blood Derivatives
Cited by: 64
Author(s): Xu Cao, Gopala K. Yakala, Francijna E. van den Hil, Amy Cochrane, Christine L. Mummery, Valeria V. Orlova
Software Mentions: 1
Published: about 6 years ago

10.1016/j.stemcr.2020.10.013

A Human Retinal Pigment Epithelium-Based Screening Platform Reveals Inducers of Photoreceptor Outer Segments Phagocytosis
Cited by: 7
Author(s): Sven Schreiter, Katerina Vafia, Rico Barsacchi, Stephen H. Tsang, Marc Bickle, Marius Ader, Mike O. Karl, Elly M. Tanaka, Seba Almedawar
Software Mentions: 1
Published: over 4 years ago

10.1016/j.stemcr.2021.08.003

Engineered 3D vessel-on-chip using hiPSC-derived endothelial- and vascular smooth muscle cells
Cited by: 29
Author(s): Marc Vila Cuenca, Amy Cochrane, Francijna E. van den Hil, Antoine A.F. de Vries, Saskia A.J. Lesnik Oberstein, Christine L. Mummery, Valeria V. Orlova
Software Mentions: 1
Published: almost 4 years ago

10.1186/scrt448

Gene markers of cellular aging in human multipotent stromal cells in culture
Cited by: 46
Author(s): Ian H. Bellayr, Jennifer Catalano, Samir Lababidi, Allison L. Yang, Jessica Lo Surdo, Steven R. Bauer, Raj K. Puri
Software Mentions: 1
Published: about 11 years ago

10.1186/scrt502

Gene expression-based enrichment of live cells from adipose tissue produces subpopulations with improved osteogenic potential
Cited by: 12
Author(s): Hetal D. Marble, Bryan A. Sutermaster, Manisha Kanthilal, Vera C. Fonseca, Eric M. Darling
Software Mentions: 1
Published: almost 11 years ago

10.1186/s13287-015-0247-2

Regionally-derived cell populations and skeletal stem cells from human foetal femora exhibit specific osteochondral and multi-lineage differentiation capacity in vitro and ex vivo
Cited by: 12
Author(s): David Gothard, Kelvin Cheung, Janos M. Kanczler, David I. Wilson, Richard O.C. Oreffo
Software Mentions: 1
Published: over 9 years ago

10.1186/s13287-016-0424-y

Involvement of hepatic macrophages in the antifibrotic effect of IGF-I-overexpressing mesenchymal stromal cells
Cited by: 22
Author(s): Esteban Fiore, Mariana Malvicini, Juan Bayo, Estanislao Peixoto, Catalina Atorrasagasti, Romina Sierra, Marcelo M. Rodríguez, Sofía Gómez Bustillo, Mariana Garcı́a, Jorge B. Aquino, Guillermo Mazzolini
Software Mentions: 1
Published: over 8 years ago

10.1186/s13287-018-1124-6

Arrayed functional genetic screenings in pluripotency reprogramming and differentiation
Cited by: 2
Author(s): Rodrigo Alexandre Panepucci, Ildercílio Mota de Souza Lima
Software Mentions: 1
Published: over 6 years ago

10.1186/s13287-019-1318-6

High-content screen in human pluripotent cells identifies miRNA-regulated pathways controlling pluripotency and differentiation
Cited by: 11
Author(s): Ildercílio Mota de Souza Lima, Josiane Lilian dos Santos Schiavinato, Sarah Blima Paulino Leite, Danuta Sastre, Hudson Lenormando de Oliveira Bezerra, Bruno Sangiorgi, Amanda Cristina Corveloni, Carolina Hassibe Thomé, Vítor Marcel Faça, Dimas Tadeu Covas, Marco Antônio Zago, Mauro Giacca, Miguel Mano, Rodrigo Alexandre Panepucci
Software Mentions: 1
Published: about 6 years ago

10.1186/s13287-019-1449-9

Tissue immune profiles supporting response to mesenchymal stromal cell therapy in acute graft-versus-host disease—a gut feeling
Cited by: 10
Author(s): Caroline Gavin, Erik Boberg, Lena von Bahr, Matteo Bottai, Anton Törnqvist Andrén, Annika Wernerson, Lindsay C. Davies, Rachael V. Sugars, Katarina Le Blanc
Software Mentions: 1
Published: over 5 years ago

10.1186/s13287-021-02587-0

Evaluation of the effect of donor weight on adipose stromal/stem cell characteristics by using weight-discordant monozygotic twin pairs
Cited by: 13
Author(s): Miia Juntunen, Sini Heinonen, Heini Huhtala, Aila Rissanen, Jaakko Kaprio, Kirsi Kuismanen, Kirsi H. Pietiläinen, Susanna Miettinen, Mimmi Patrikoski
Software Mentions: 1
Published: almost 4 years ago

10.1002/stem.1015

Inhibition of Platelet‐Derived Growth Factor Receptor Signaling Regulates Oct4 and Nanog Expression, Cell Shape, and Mesenchymal Stem Cell Potency
Cited by: 66
Author(s): Stephen G. Ball, Adrian Shuttleworth, Cay M. Kielty
Software Mentions: 1
Published: over 13 years ago

10.1155/2016/5282185

Potential Role of Activating Transcription Factor 5 during Osteogenesis
Cited by: 17
Author(s): Luisa Vicari, Giovanna Calabrese, Stefano Forte, Raffaella Giuffrida, Cristina Colarossi, Nunziatina Laura Parrinello, Lorenzo Memeo
Software Mentions: 1
Published: over 9 years ago

10.1155/2016/8364382

Fibronectin and Cyclic Strain Improve Cardiac Progenitor Cell Regenerative Potential<i>In Vitro</i>
Cited by: 24
Author(s): Kristin M. French, Joshua T. Maxwell, Srishti Bhutani, Shohini Ghosh-Choudhary, Marcos J. Fierro, Todd D. Johnson, Karen L. Christman, W. Robert Taylor, Michael Davis
Software Mentions: 1
Published: over 9 years ago

10.1155/2017/7648409

IGF1 and NRG1 Enhance Proliferation, Metabolic Maturity, and the Force-Frequency Response in hESC-Derived Engineered Cardiac Tissues
Cited by: 46
Author(s): Cassady E. Rupert, Kareen L K Coulombe
Software Mentions: 1
Published: over 8 years ago

10.1155/2017/9271869

Hair Germ Model In Vitro via Human Postnatal Keratinocyte-Dermal Papilla Interactions: Impact of Hyaluronic Acid
Cited by: 38
Author(s): Ekaterina P. Kalabusheva, В. В. Терских, E. A. Vorotelyak
Software Mentions: 1
Published: over 8 years ago

10.1155/2018/2190657

Focal Adhesion Kinase and ROCK Signaling Are Switch-Like Regulators of Human Adipose Stem Cell Differentiation towards Osteogenic and Adipogenic Lineages
Cited by: 29
Author(s): Laura Hyväri, Miina Ojansivu, Miia Juntunen, Kimmo Kartasalo, Susanna Miettinen, Sari Vanhatupa
Software Mentions: 1
Published: almost 7 years ago

10.1155/2019/5980465

Metformin Delays Satellite Cell Activation and Maintains Quiescence
Cited by: 31
Author(s): Theodora Pavlidou, Milica Marinković, Marco Rosina, Claudia Fuoco, Simone Vumbaca, Cesare Gargioli, Luisa Castagnoli, Gianni Cesareni
Software Mentions: 1
Published: over 6 years ago

10.1155/2020/4242130

Human Adipose Derived Cells in Two- and Three-Dimensional Cultures: Functional Validation of an In Vitro Fat Construct
Cited by: 16
Author(s): Robert Bender, Mary Ellen McCarthy, Theodore Brown, Joanna Bukowska, Sharon L. Smith, Rosalyn D. Abbott, David L. Kaplan, Christopher C. Williams, James W Wade, Andrea Alarcon, Xiying Wu, Frank H. Lau, Jeffrey M. Gimble, Trivia Frazier
Software Mentions: 1
Published: about 5 years ago

10.1155/2020/9363809

Human Cardiac Fibroblast Number and Activation State Modulate Electromechanical Function of hiPSC-Cardiomyocytes in Engineered Myocardium
Cited by: 17
Author(s): Cassady E. Rupert, Tae Yun Kim, Bum‐Rak Choi, Kareen L K Coulombe
Software Mentions: 1
Published: about 5 years ago

10.1155/2020/8853541

Myocardin-Related Transcription Factor A (MRTF-A) Regulates the Balance between Adipogenesis and Osteogenesis of Human Adipose Stem Cells
Cited by: 7
Author(s): Laura Hyväri, Sari Vanhatupa, Heidi T. Halonen, Minna Kääriäinen, Susanna Miettinen
Software Mentions: 1
Published: almost 5 years ago

10.1155/2020/8841026

In Vitro Oxygen-Glucose Deprivation-Induced Stroke Models with Human Neuroblastoma Cell- and Induced Pluripotent Stem Cell-Derived Neurons
Cited by: 12
Author(s): Miia Juntunen, Sanna Hagman, Anaïck Moisan, Susanna Narkilahti, Susanna Miettinen
Software Mentions: 1
Published: over 4 years ago

10.7150/thno.37851

Specific targeting of PDGFRβ in the stroma inhibits growth and angiogenesis in tumors with high PDGF-BB expression
Cited by: 34
Author(s): Maria Tsioumpekou, Sara I. Cunha, Haisha Ma, Aive Åhgren, Jessica Cedervall, Anna‐Karin Olsson, Carl‐Henrik Heldin, Johan Lennartsson
Software Mentions: 1
Published: over 5 years ago

10.7150/thno.44053

ALICE: a hybrid AI paradigm with enhanced connectivity and cybersecurity for a serendipitous encounter with circulating hybrid cells
Cited by: 9
Author(s): Kok Suen Cheng, Rongbin Pan, Huaping Pan, Binglin Li, Stephene Shadrack Meena, Huan Xing, Ying Jing Ng, Kaili Qin, Xiangyun Liao, Benson Kiprono Kosgei, Zhipeng Wang, Ray P. S. Han
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-45246-4

Multiparametric rapid screening of neuronal process pathology for drug target identification in HSP patient-specific neurons
Cited by: 26
Author(s): Kristina Rehbach, Jaideep Kesavan, Stefan Hauser, Swetlana Ritzenhofen, Johannes Jungverdorben, Rebecca Schüle, Lüdger Schöls, Michael Peitz, Oliver Brüstle
Software Mentions: 1
Published: about 6 years ago

10.1089/ten.tec.2018.0285

Stabilization and Sterilization of Pericardial Scaffolds by Ultraviolet and Low-Energy Electron Irradiation
Cited by: 9
Author(s): Simona Walker, Jessy Schönfelder, Sems Malte Tugtekin, C. Wetzel, Michael C. Hacker, Michaela Schulz‐Siegmund
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-019-46689-5

Automated cell boundary and 3D nuclear segmentation of cells in suspension
Cited by: 16
Author(s): Benjamin K. Kesler, Guoliang Li, Alexander Thiemicke, Rohit Venkat, Gregor Neuert
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-019-46682-y

Fluorescence Imaging of Actin Turnover Parses Early Stem Cell Lineage Divergence and Senescence
Cited by: 16
Author(s): Prakhar Mishra, D.C. Martin, Ioannis P. Androulakis, Prabhas V. Moghe
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-019-48360-5

The systemic exercise-released chemokine lymphotactin/XCL1 modulates in vitro adult hippocampal precursor cell proliferation and neuronal differentiation
Cited by: 6
Author(s): Odette Leiter, Stefanie N. Bernas, Suse Seidemann, Rupert W. Overall, Cindy Horenburg, Susann Kowal, Gerd Kempermann, Tara L. Walker
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-019-49191-0

Human cardiac myosin light chain 4 (MYL4) mosaic expression patterns vary by sex
Cited by: 8
Author(s): Tony Y. Wang, Dan E. Arking, Joseph J. Maleszewski, Karen Fox-Talbot, Tim O. Nieuwenhuis, Lakshmi Santhanam, Renu Virmani, Avi Z. Rosenberg, Marc K. Halushka
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-019-51196-8

Adipocyte PU.1 knockout promotes insulin sensitivity in HFD-fed obese mice
Cited by: 11
Author(s): Denise E. Lackey, Felipe C.G. Reis, Roi Isaac, Rizaldy C. Zapata, Dalila El Ouarrat, Yun Sok Lee, Gautam Bandyopadhyay, Jachelle M. Ofrecio, Da Young Oh, Olivia Osborn
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-019-52107-7

Chronic kidney disease exacerbates ischemic limb myopathy in mice via altered mitochondrial energetics
Cited by: 26
Author(s): Fabian N. Berru, Sarah E. Gray, Trace Thome, Ritwik Kumar, Zachary R. Salyers, Madeline Coleman, Dennis Le, Kerri O’Malley, Leonardo F. Ferreira, Scott A. Berceli, Salvatore T. Scali, Terence E. Ryan
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-52642-3

Spinal gastrin releasing peptide receptor expressing interneurons are controlled by local phasic and tonic inhibition
Cited by: 13
Author(s): Fábio Batista Freitag, Aikeremu Ahemaiti, Jon E. T. Jakobsson, Hannah M. Weman, Malin C. Lagerström
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-53414-9

Co-stimulation with IL-1β and TNF-α induces an inflammatory reactive astrocyte phenotype with neurosupportive characteristics in a human pluripotent stem cell model system
Cited by: 79
Author(s): Tanja Hyvärinen, Sanna Hagman, Mervi Ristola, Lassi Sukki, Katariina Veijula, Joose Kreutzer, Pasi Kallio, Susanna Narkilahti
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-53647-8

Functional characterization of human pluripotent stem cell-derived cortical networks differentiated on laminin-521 substrate: comparison to rat cortical cultures
Cited by: 69
Author(s): Tanja Hyvärinen, Anu Hyysalo, Fikret Emre Kapucu, Laura Aarnos, Andrey Vinogradov, Stephen J. Eglen, Laura Ylä‐Outinen, Susanna Narkilahti
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-53652-x

Maternal overnutrition during critical developmental periods leads to different health adversities in the offspring: relevance of obesity, addiction and schizophrenia
Cited by: 18
Author(s): Gitalee Sarker, Kathrin Litwan, Rahel Kästli, Daria Peleg‐Raibstein
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-53911-x

Automated detection and quantification of breast cancer brain metastases in an animal model using democratized machine learning tools
Cited by: 16
Author(s): Dina Sikpa, Jérémie P. Fouquet, Réjean Lebel, Phedias Diamandis, Maxime Richer, Martin Lepage
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-54741-7

Telomerase increasing compound protects hippocampal neurons from amyloid beta toxicity by enhancing the expression of neurotrophins and plasticity related genes
Cited by: 17
Author(s): Natalie Baruch-Eliyahu, Vladislav Rud, Alex Braiman, Esther Priel
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-54244-5

DeepSynth: Three-dimensional nuclear segmentation of biological images using neural networks trained with synthetic data
Cited by: 66
Author(s): Kenneth W. Dunn, Chichen Fu, David Joon Ho, Soonam Lee, Shuo Han, Paul Salama, Edward J. Delp
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-57793-2

The plant natural product 2-methoxy-1,4-naphthoquinone stimulates therapeutic neural repair properties of olfactory ensheathing cells
Cited by: 14
Author(s): M. Chen, Marie‐Laure Vial, Lydia Gee, Rohan A. Davis, James St John, Jenny Ekberg
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-58267-1

p53 dynamics in single cells are temperature-sensitive
Cited by: 12
Author(s): Marcel Jentsch, Petra Snyder, Caibin Sheng, Elena Cristiano, Alexander Loewer
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-57994-9

Nuclear bodies formed by polyQ-ataxin-1 protein are liquid RNA/protein droplets with tunable dynamics
Cited by: 12
Author(s): Sunyuan Zhang, Elizabeth Hinde, Molly Schneider, David A. Jans, Marie A. Bogoyevitch
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-58861-3

Fluopack screening platform for unbiased cellular phenotype profiling
Cited by: 12
Author(s): Kang Zhao, Ioannis K. Moutsatsos, Francesca Moretti, Philip S. Bergman, Xian Zhang, Beat Nyfeler, Christophe Antczak
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-58668-2

Statin-induced myopathic changes in primary human muscle cells and reversal by a prostaglandin F2 alpha analogue
Cited by: 16
Author(s): S Grunwald, Oliver Popp, Stefanie Haafke, Nicole Jedraszczak, Ulrike Grieben, Kathrin Saar, Giannino Patone, Wolfram Kreß, Elisabeth Steinhagen‐Thiessen, Gunnar Dittmar, Simone Spuler
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-60246-5

Exploring the advantages of intensity-modulated proton therapy: experimental validation of biological effects using two different beam intensity-modulation patterns
Cited by: 7
Author(s): Duo Ma, Lawrence F. Bronk, M. Kerr, Mary Sobieski, Mei Chen, Changran Geng, Joycelyn Yiu, Xiaochun Wang, Narayan Sahoo, Wenhua Cao, Xiaodong Zhang, Clifford Stephan, Radhe Mohan, David R. Grosshans, Fada Guan
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-60469-6

Streptonigrin at low concentration promotes heterochromatin formation
Cited by: 6
Author(s): Andre C. Loyola, Kevin Dao, Robin Shang, Lin Zhang, Pranabananda Dutta, Cody Fowler, Jinghong Li, Willis X. Li
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-60947-x

Pancreatic islets seeded in a novel bioscaffold forms an organoid to rescue insulin production and reverse hyperglycemia in models of type 1 diabetes
Cited by: 9
Author(s): Diana M. Elizondo, Nailah Z. D. Brandy, Ricardo Louzada da Silva, Tatiana Rodrigues de Moura, Jamel Ali, Dazhi Yang, Michael W. Lipscomb
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-61352-0

NBEAL1 controls SREBP2 processing and cholesterol metabolism and is a susceptibility locus for coronary artery disease
Cited by: 16
Author(s): Christian Bindesbøll, Aleksander Aas, Margrét H. Ögmundsdóttir, Serhiy Pankiv, Trine M. Reine, Roberto Zoncu, Anne Simonsen
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-61646-3

Development of an experimental method of systematically estimating protein expression limits in HEK293 cells
Cited by: 17
Author(s): Yoshihiro Mori, Yuki Yoshida, Ayano Satoh, Hisao Moriya
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-61725-5

Histopathological and immunohistochemical evaluation of cellular response to a woven and electrospun polydioxanone (PDO) and polycaprolactone (PCL) patch for tendon repair
Cited by: 19
Author(s): Mustafa S. Rashid, Jayesh Dudhia, Stephanie G. Dakin, Sarah Snelling, Roberta De Godoy, Pierre‐Alexis Mouthuy, Roger K. Smith, Mark E. Morrey, Andrew Carr
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-61808-3

Test-time augmentation for deep learning-based cell segmentation on microscopy images
Cited by: 109
Author(s): Nikita Moshkov, Botond Mathe, Attila Kertész‐Farkas, Réka Hollandi, Péter Horváth
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-62799-x

Axial stretch regulates rat tail collecting lymphatic vessel contractions
Cited by: 10
Author(s): Mohammad Razavi, Julie Leonard‐Duke, Becky A Hardie, J. Brandon Dixon, Rudolph L. Gleason
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-65152-4

Drug repurposing of pyrimidine analogs as potent antiviral compounds against human enterovirus A71 infection with potential clinical applications
Cited by: 17
Author(s): Jialei Sun, Thinesshwary Yogarajah, Regina Ching Hua Lee, Parvinder Kaur, Masafumi Inoue, Yong Kiam Tan, Justin Jang Hann Chu
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-020-67175-3

Human Adipocyte Conditioned Medium Promotes In Vitro Fibroblast Conversion to Myofibroblasts
Cited by: 10
Author(s): Mariam Y. El-Hattab, Yoshiaki Nagumo, Françoise A. Gourronc, Aloysius J. Klingelhutz, James A. Ankrum, Edward A. Sander
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-020-67091-6

Lysosomal perturbations in human dopaminergic neurons derived from induced pluripotent stem cells with PARK2 mutation
Cited by: 29
Author(s): Justyna Okarmus, Helle Bogetofte, Sissel Ida Schmidt, Matias Ryding, Silvia García-López, Brent J. Ryan, Alberto Martínez‐Serrano, Poul Hyttel, Morten Meyer
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-020-67738-4

Quantitative analysis of tumor-specific BCL2 expression in DLBCL: refinement of prognostic relevance of BCL2
Cited by: 5
Author(s): Jin Roh, Hyungwoo Cho, Dok Hyun Yoon, Jung Yong Hong, A-Neum Lee, Hyeon Seok Eom, Hyewon Lee, Weon Seo Park, Jae Ho Han, Seong Hyun Jeong, Joon Seong Park, Hyo-Kyung Pak, So‐Woon Kim, Sangjin Kim, Cheolwon Suh, Jooryung Huh, Chan-Sik Park
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-020-68138-4

SimpylCellCounter: an automated solution for quantifying cells in brain tissue
Cited by: 1
Author(s): Aneesh Bal, Fidel Maureira, Amy A. Arguello
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-69956-2

Long-term in vivo imaging reveals tumor-specific dissemination and captures host tumor interaction in zebrafish xenografts
Cited by: 18
Author(s): Nandini Asokan, Stephan Daetwyler, Stefanie N. Bernas, Christopher Schmied, Steffen Vogler, Katrin Lambert, Manja Wobus, Martin Wermke, Gerd Kempermann, Jan Huisken, Michael Brand, Martin Bornhäuser
Software Mentions: 1
Published: almost 5 years ago

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