pypi: CellProfiler | Projects | Ecosyste.ms: Papers

10.1038/s41598-020-58267-1

p53 dynamics in single cells are temperature-sensitive
Cited by: 12
Author(s): Marcel Jentsch, Petra Snyder, Caibin Sheng, Elena Cristiano, Alexander Loewer
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-57994-9

Nuclear bodies formed by polyQ-ataxin-1 protein are liquid RNA/protein droplets with tunable dynamics
Cited by: 12
Author(s): Sunyuan Zhang, Elizabeth Hinde, Molly Schneider, David A. Jans, Marie A. Bogoyevitch
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-58861-3

Fluopack screening platform for unbiased cellular phenotype profiling
Cited by: 12
Author(s): Kang Zhao, Ioannis K. Moutsatsos, Francesca Moretti, Philip S. Bergman, Xian Zhang, Beat Nyfeler, Christophe Antczak
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-020-58668-2

Statin-induced myopathic changes in primary human muscle cells and reversal by a prostaglandin F2 alpha analogue
Cited by: 16
Author(s): S Grunwald, Oliver Popp, Stefanie Haafke, Nicole Jedraszczak, Ulrike Grieben, Kathrin Saar, Giannino Patone, Wolfram Kreß, Elisabeth Steinhagen‐Thiessen, Gunnar Dittmar, Simone Spuler
Software Mentions: 1
Published: almost 6 years ago

10.18632/oncotarget.20642

Separation of low and high grade colon and rectum carcinoma by eukaryotic translation initiation factors 1, 5 and 6
Cited by: 33
Author(s): Nicole Golob-Schwarzl, Caroline Schweiger, Carina Koller, Stefanie Krassnig, Margit Gogg-Kamerer, Nadine Gantenbein, Anna M. Toeglhofer, Christina Wodlej, Helmut Bergler, Brigitte Pertschy, Stefan Uranitsch, Magdalena Holter, Amin El‐Heliebi, Julia Fuchs, Andreas Punschart, Philipp Stiegler, Marlen Keil, Jens Hoffmann, David Henderson, Hans Lehrach, Christoph Reinhard, Christian Regenbrecht, Rudolf Schicho, Peter Fickert, Sigurd Lax, Johannes Haybaeck
Software Mentions: 1
Published: about 8 years ago

10.1089/adt.2016.730

Development of the Theta Comparative Cell Scoring Method to Quantify Diverse Phenotypic Responses Between Distinct Cell Types
Cited by: 18
Author(s): Scott J. Warchal, John C. Dawson, Neil O. Carragher
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-020-60246-5

Exploring the advantages of intensity-modulated proton therapy: experimental validation of biological effects using two different beam intensity-modulation patterns
Cited by: 7
Author(s): Duo Ma, Lawrence F. Bronk, M. Kerr, Mary Sobieski, Mei Chen, Changran Geng, Joycelyn Yiu, Xiaochun Wang, Narayan Sahoo, Wenhua Cao, Xiaodong Zhang, Clifford Stephan, Radhe Mohan, David R. Grosshans, Fada Guan
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-60469-6

Streptonigrin at low concentration promotes heterochromatin formation
Cited by: 6
Author(s): Andre C. Loyola, Kevin Dao, Robin Shang, Lin Zhang, Pranabananda Dutta, Cody Fowler, Jinghong Li, Willis X. Li
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-60947-x

Pancreatic islets seeded in a novel bioscaffold forms an organoid to rescue insulin production and reverse hyperglycemia in models of type 1 diabetes
Cited by: 9
Author(s): Diana M. Elizondo, Nailah Z. D. Brandy, Ricardo Louzada da Silva, Tatiana Rodrigues de Moura, Jamel Ali, Dazhi Yang, Michael W. Lipscomb
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-61352-0

NBEAL1 controls SREBP2 processing and cholesterol metabolism and is a susceptibility locus for coronary artery disease
Cited by: 16
Author(s): Christian Bindesbøll, Aleksander Aas, Margrét H. Ögmundsdóttir, Serhiy Pankiv, Trine M. Reine, Roberto Zoncu, Anne Simonsen
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-61646-3

Development of an experimental method of systematically estimating protein expression limits in HEK293 cells
Cited by: 17
Author(s): Yoshihiro Mori, Yuki Yoshida, Ayano Satoh, Hisao Moriya
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-61725-5

Histopathological and immunohistochemical evaluation of cellular response to a woven and electrospun polydioxanone (PDO) and polycaprolactone (PCL) patch for tendon repair
Cited by: 19
Author(s): Mustafa S. Rashid, Jayesh Dudhia, Stephanie G. Dakin, Sarah Snelling, Roberta De Godoy, Pierre‐Alexis Mouthuy, Roger K. Smith, Mark E. Morrey, Andrew Carr
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-61808-3

Test-time augmentation for deep learning-based cell segmentation on microscopy images
Cited by: 109
Author(s): Nikita Moshkov, Botond Mathe, Attila Kertész‐Farkas, Réka Hollandi, Péter Horváth
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-62799-x

Axial stretch regulates rat tail collecting lymphatic vessel contractions
Cited by: 10
Author(s): Mohammad Razavi, Julie Leonard‐Duke, Becky A Hardie, J. Brandon Dixon, Rudolph L. Gleason
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-65152-4

Drug repurposing of pyrimidine analogs as potent antiviral compounds against human enterovirus A71 infection with potential clinical applications
Cited by: 17
Author(s): Jialei Sun, Thinesshwary Yogarajah, Regina Ching Hua Lee, Parvinder Kaur, Masafumi Inoue, Yong Kiam Tan, Justin Jang Hann Chu
Software Mentions: 1
Published: over 5 years ago

10.1186/ar4157

Gene expression profiling of early intervertebral disc degeneration reveals a down-regulation of canonical Wnt signaling and caveolin-1 expression: implications for development of regenerative strategies
Cited by: 66
Author(s): Lucas A. Smolders, Björn P. Meij, David Onis, Frank M. Riemers, Niklas Bergknut, Richard Wubbolts, Guy C. M. Grinwis, Martin Houweling, Marian J. A. Groot Koerkamp, Dik van Leenen, Frank C. P. Holstege, H. A. W. Hazewinkel, Laura B. Creemers, Louis C. Penning, Marianna A. Tryfonidou
Software Mentions: 1
Published: almost 13 years ago

10.1038/s41598-020-67175-3

Human Adipocyte Conditioned Medium Promotes In Vitro Fibroblast Conversion to Myofibroblasts
Cited by: 10
Author(s): Mariam Y. El-Hattab, Yoshiaki Nagumo, Françoise A. Gourronc, Aloysius J. Klingelhutz, James A. Ankrum, Edward A. Sander
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-67091-6

Lysosomal perturbations in human dopaminergic neurons derived from induced pluripotent stem cells with PARK2 mutation
Cited by: 29
Author(s): Justyna Okarmus, Helle Bogetofte, Sissel Ida Schmidt, Matias Ryding, Silvia García-López, Brent J. Ryan, Alberto Martínez‐Serrano, Poul Hyttel, Morten Meyer
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-67738-4

Quantitative analysis of tumor-specific BCL2 expression in DLBCL: refinement of prognostic relevance of BCL2
Cited by: 5
Author(s): Jin Roh, Hyungwoo Cho, Dok Hyun Yoon, Jung Yong Hong, A-Neum Lee, Hyeon Seok Eom, Hyewon Lee, Weon Seo Park, Jae Ho Han, Seong Hyun Jeong, Joon Seong Park, Hyo-Kyung Pak, So‐Woon Kim, Sangjin Kim, Cheolwon Suh, Jooryung Huh, Chan-Sik Park
Software Mentions: 1
Published: over 5 years ago

10.1186/ar4374

Mast cells exert pro-inflammatory effects of relevance to the pathophyisology of tendinopathy
Cited by: 36
Author(s): Hayedeh Behzad, Aishwariya Sharma, Rouhollah Mousavizadeh, Alex X. Lu, Alexander Scott
Software Mentions: 1
Published: almost 13 years ago

10.18632/oncotarget.22729

Neat1 in hematopoietic stem cells
Cited by: 8
Author(s): Noam Fallik, Yael Bar-Lavan, Yariv Greenshpan, Oron Goldstein, Markus Grosch, Micha Drukker, Roi Gazit
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-020-68138-4

SimpylCellCounter: an automated solution for quantifying cells in brain tissue
Cited by: 1
Author(s): Aneesh Bal, Fidel Maureira, Amy A. Arguello
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-69956-2

Long-term in vivo imaging reveals tumor-specific dissemination and captures host tumor interaction in zebrafish xenografts
Cited by: 18
Author(s): Nandini Asokan, Stephan Daetwyler, Stefanie N. Bernas, Christopher Schmied, Steffen Vogler, Katrin Lambert, Manja Wobus, Martin Wermke, Gerd Kempermann, Jan Huisken, Michael Brand, Martin Bornhäuser
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-72201-5

Histopathological imaging features- versus molecular measurements-based cancer prognosis modeling
Cited by: 3
Author(s): Sanguo Zhang, Yu Fan, Tingyan Zhong, Shuangge Ma
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-020-71781-6

NF-κB inhibition prevents acute shear stress-induced inflammation in the saphenous vein graft endothelium
Cited by: 22
Author(s): Amanda J. Ward, Gianni Angelini, Massimo Caputo, Paul C. Evans, Jason L. Johnson, M‐Saadeh Suleiman, Robert Tulloh, Sarah J. George, Mustafa Zakkar
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-020-73315-6

Cellular senescence-mediated exacerbation of Duchenne muscular dystrophy
Cited by: 33
Author(s): Hidetoshi Sugihara, Naomi Teramoto, Katsuyuki Nakamura, Takanori Shiga, Taku Shirakawa, Masafumi Matsuo, Masashi Ogasawara, Ichizo Nishino, Takashi Matsuwaki, Masugi Nishihara, Keitaro Yamanouchi
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-020-74080-2

Multivalent tumor suppressor adenomatous polyposis coli promotes Axin biomolecular condensate formation and efficient β-catenin degradation
Cited by: 12
Author(s): Tie-Mei Li, Jing Ren, Dylan Husmann, John P. Coan, Or Gozani, Katrin F. Chua
Software Mentions: 1
Published: about 5 years ago

10.1063/5.0035291

Injectable, macroporous scaffolds for delivery of therapeutic genes to the injured spinal cord
Cited by: 15
Author(s): Arshia Ehsanipour, Mayilone Sathialingam, Laila M. Rad, Joseph de Rutte, Rebecca D. Bierman, Jesse Liang, Weikun Xiao, Dino Di Carlo, Stephanie K. Seidlits
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-75779-y

Tamoxifen induces hypercoagulation and alterations in ERα and ERβ dependent on breast cancer sub-phenotype ex vivo
Cited by: 5
Author(s): Kyrtania Pather, Tanya N. Augustine
Software Mentions: 1
Published: about 5 years ago

10.1186/ar2493

Upregulated miR-146a expression in peripheral blood mononuclear cells from rheumatoid arthritis patients
Cited by: 603
Author(s): Kaleb M. Pauley, Minoru Satoh, Antony C. S. Chan, Michael R. Bubb, Westley H. Reeves, Edward K. L. Chan
Software Mentions: 1
Published: almost 18 years ago

10.1038/s41598-020-78015-9

Generation of immune cell containing adipose organoids for in vitro analysis of immune metabolism
Cited by: 16
Author(s): Jacqueline Taylor, Julia Sellin, Lars Kuerschner, Lennart Krähl, Yasmin Majlesain, Irmgard Förster, Christoph Thiele, E. Weber
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-78432-w

Mammary epithelial morphogenesis in 3D combinatorial microenvironments
Cited by: 3
Author(s): Raphaëlle Luisier, Mehmet Girgin, Matthias P. Lütolf, Adrian Ranga
Software Mentions: 1
Published: almost 5 years ago

10.1523/ENEURO.0239-19.2019

Loss of Tiparp Results in Aberrant Layering of the Cerebral Cortex
Cited by: 8
Author(s): Giulia Grimaldi, Barbora Vagaská, Oleksandr Ievglevskyi, Elena Kondratskaya, Joel C. Glover, Jason Matthews
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-020-79966-9

Outer membrane vesicles containing OmpA induce mitochondrial fragmentation to promote pathogenesis of Acinetobacter baumannii
Cited by: 41
Author(s): Varnesh Tiku, Eric M. Kofoed, Donghong Yan, Jing Kang, Min Xu, Mike Reichelt, Ivan Đikić, Man‐Wah Tan
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-79637-9

TEM, SEM, and STEM-based immuno-CLEM workflows offer complementary advantages
Cited by: 9
Author(s): Viola Oorschot, Benjamin W. Lindsey, Jan Kaslin, Georg Ramm
Software Mentions: 1
Published: almost 5 years ago

10.1002/cjp2.218

High tumor cell platelet‐derived growth factor receptor beta expression is associated with shorter survival in malignant pleural epithelioid mesothelioma
Cited by: 3
Author(s): Hely Ollila, Juuso Paajanen, Henrik Wolff, Ilkka Ilonen, Eva Sutinen, Katja Välimäki, Arne Östman, Sisko Anttila, Eeva Kettunen, Jari Räsänen, Olli Kallioniemi, Marjukka Myllärniemi, Mikko I. Mäyränpää, Teijo Pellinen
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-021-81054-5

Self-agglomerated collagen patterns govern cell behaviour
Cited by: 7
Author(s): Aysegul Dede Eren, E. Eren, Twan J. S. Wilting, Jan de Boer, Hanneke Gelderblom, Jasper Foolen
Software Mentions: 1
Published: almost 5 years ago

10.1155/2014/898453

Towards a Computational Model of a Methane Producing Archaeum
Cited by: 16
Author(s): J.R. Peterson, Piyush Labhsetwar, Jeremy R. Ellermeier, Petra R. A. Kohler, Ankur Jain, Taekjip Ha, William W. Metcalf, Zaida Luthey‐Schulten
Software Mentions: 1
Published: almost 12 years ago

10.1038/s41598-021-82140-4

Imaging of photoacoustic-mediated permeabilization of giant unilamellar vesicles (GUVs)
Cited by: 9
Author(s): Diogo A. Pereira, Alexandre D. Silva, Patrícia A. T. Martins, Ana P. Piedade, Dmitro Martynowych, David Veysset, Maria João Moreno, Carlos Serpa, Keith A. Nelson, Luis Arnaut
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-82985-9

Estimation of three-dimensional chromatin morphology for nuclear classification and characterisation
Cited by: 3
Author(s): Priyanka Rana, Arcot Sowmya, Erik Meijering, Yang Song
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-82917-7

Small molecule inhibitor of OGG1 blocks oxidative DNA damage repair at telomeres and potentiates methotrexate anticancer effects
Cited by: 17
Author(s): Juan Miguel Baquero, Carlos Benitéz‐Buelga, Varshni Rajagopal, Zhiyao Zhao, Raúl Torres-Ruíz, Sarah Müller, Bishoy Hanna, Olga Loseva, Olov Wallner, Maurice Michel, Sandra Rodríguez‐Perales, Helge Gad, Torkild Visnes, Thomas Helleday, Javier Benı́tez, Ana Osorio
Software Mentions: 1
Published: almost 5 years ago

10.3390/nu10111788

Direct and Long-Term Metabolic Consequences of Lowly vs. Highly-Digestible Starch in the Early Post-Weaning Diet of Mice
Cited by: 8
Author(s): José M. S. Fernández-Calleja, Lex Bouwman, Hans J. M. Swarts, Annemarie Oosting, Jaap Keijer, Evert M. van Schothorst
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-021-83740-w

Human induced pluripotent stem cell-based platform for modeling cardiac ischemia
Cited by: 17
Author(s): Martta Häkli, Joose Kreutzer, Antti-Juhana Mäki, Hannu Välimäki, Henna Lappi, Heini Huhtala, Pasi Kallio, Katriina Aalto‐Setälä, Mari Pekkanen-Mattila
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-021-83537-x

Quantitative phase microscopy for non-invasive live cell population monitoring
Cited by: 18
Author(s): Shérazade Aknoun, Manuel Yonnet, Zied Djabari, Fanny Graslin, Mark Taylor, Thierry Pourcher, Wattellier Benoit, Philippe Pognonec
Software Mentions: 1
Published: over 4 years ago

10.1007/s00204-021-03036-w

The in vitro assessment of the toxicity of volatile, oxidisable, redox-cycling compounds: phenols as an example
Cited by: 3
Author(s): Laia Tolosa, Teresa Martínez-Sena, Johannes P. Schimming, Erika Moro, Sylvia Escher, Bas ter Braak, Bob van der Water, Miguel A. Miranda, Barbara M.A. van Vugt-Lussenburg, José V. Castell
Software Mentions: 1
Published: over 4 years ago

10.1007/s00204-020-02902-3

Multiple-endpoint in vitro carcinogenicity test in human cell line TK6 distinguishes carcinogens from non-carcinogens and highlights mechanisms of action
Cited by: 4
Author(s): Katherine E. Chapman, Eleanor C. Wilde, Fiona Chapman, Jatin R. Verma, Ume-Kulsoom Shah, Leanne Stannard, Anna L. Seager, James A. Tonkin, M. Rowan Brown, Ann Doherty, George E. Johnson, Shareen H. Doak, Gareth Jenkins
Software Mentions: 1
Published: about 5 years ago

10.3390/antiox9070586

The NADPH Oxidase Isoform 1 Contributes to Angiotensin II-Mediated DNA Damage in the Kidney
Cited by: 4
Author(s): Anna Zimnol, Nora Spicker, Ronja Balhorn, Katrin Schröder, Nicole Schupp
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-021-86315-x

IL-1β mediated nanoscale surface clustering of integrin α5β1 regulates the adhesion of mesenchymal stem cells
Cited by: 2
Author(s): Stephanie A. Maynard, Ekaterina Pchelintseva, Limor Zwi‐Dantsis, Anika Nagelkerke, Sahana Gopal, Yuri Korchev, Andrew Shevchuk, Molly M. Stevens
Software Mentions: 1
Published: over 4 years ago

10.1038/s41378-018-0020-7

Shaped 3D microcarriers for adherent cell culture and analysis
Cited by: 42
Author(s): Chueh‐Yu Wu, Daniel Stoecklein, Aditya Kommajosula, Jonathan Lin, Keegan Owsley, Baskar Ganapathysubramanian, Dino Di Carlo
Software Mentions: 1
Published: over 7 years ago

10.1186/1759-8753-1-13

Creation of a novel telomere-cutting endonuclease based on the EN domain of telomere-specific non-long terminal repeat retrotransposon, TRAS1
Cited by: 11
Author(s): Kazutoshi Yoshitake, Hideyuki Aoyagi, Haruhiko Fujiwara
Software Mentions: 1
Published: over 15 years ago

10.1186/s13229-018-0228-2

Characterization and structure-activity relationships of indenoisoquinoline-derived topoisomerase I inhibitors in unsilencing the dormant Ube3a gene associated with Angelman syndrome
Cited by: 26
Author(s): Hyeong-Min Lee, Ellen P. Clark, M. Bram Kuijer, Mary Cushman, Yves Pommier, Benjamin D. Philpot
Software Mentions: 1
Published: over 7 years ago

10.3390/microorganisms9010156

Automation of Infectious Focus Assay for Determination of Filovirus Titers and Direct Comparison to Plaque and TCID50 Assays
Cited by: 16
Author(s): Patrick T. Keiser, Manu Anantpadma, Hilary Staples, Ricardo Carrión, Robert A. Davey
Software Mentions: 1
Published: almost 5 years ago

10.1186/s13041-021-00848-w

Endosomal traffic and glutamate synapse activity are increased in VPS35 D620N mutant knock-in mouse neurons, and resistant to LRRK2 kinase inhibition
Cited by: 3
Author(s): Chelsie Kadgien, Anusha Kamesh, Austen J. Milnerwood
Software Mentions: 1
Published: about 4 years ago

10.1186/s13041-021-00845-z

GDF11 expressed in the adult brain negatively regulates hippocampal neurogenesis
Cited by: 13
Author(s): Brittany A Mayweather, Sean M. Buchanan, Lee L. Rubin
Software Mentions: 1
Published: about 4 years ago

10.1186/s13041-020-00641-1

A microscopy-based small molecule screen in primary neurons reveals neuroprotective properties of the FDA-approved anti-viral drug Elvitegravir
Cited by: 3
Author(s): Simon F. Merz, C. Peter Bengtson, Clara Tepohl, Anna M. Hagenston, Hilmar Bading, Carlos Bas‐Orth
Software Mentions: 1
Published: about 5 years ago

10.1186/s12943-018-0764-6

Nischarin regulates focal adhesion and Invadopodia formation in breast cancer cells
Cited by: 26
Author(s): Mazvita Maziveyi, Shaohong Dong, Somesh Baranwal, Suresh K. Alahari
Software Mentions: 1
Published: almost 8 years ago

10.1186/1476-4598-13-208

Induction of integrin α2 in a highly bone metastatic human prostate cancer cell line: roles of RANKL and AR under three-dimensional suspension culture
Cited by: 22
Author(s): Shabnam Ziaee, Leland W.K. Chung
Software Mentions: 1
Published: almost 12 years ago

10.1038/s41598-021-86549-9

An improved biolistic delivery and analysis method for evaluation of DNA and CRISPR-Cas delivery efficacy in plant tissue
Cited by: 16
Author(s): Kyle Miller, Alan L. Eggenberger, Keunsub Lee, Fei Liu, Minjeong Kang, Madison Drent, Andrew Ruba, Tyler Kirscht, Kan Wang, Shan Jiang
Software Mentions: 1
Published: over 4 years ago

10.1016/j.molcel.2018.08.043

POLE3-POLE4 Is a Histone H3-H4 Chaperone that Maintains Chromatin Integrity during DNA Replication
Cited by: 82
Author(s): Roberto Bellelli, Ondrej Beláň, V.E. Pye, Camille Clément, Sarah Maslen, J. Mark Skehel, Peter Cherepanov, Geneviève Almouzni, Simon J. Boulton
Software Mentions: 1
Published: about 7 years ago

10.3390/microorganisms9020366

Streptococcus suis Induces Expression of Cyclooxygenase-2 in Porcine Lung Tissue
Cited by: 2
Author(s): Muriel Dresen, Josephine Schenk, Yenehiwot Berhanu Weldearegay, Désirée Vötsch, Wolfgang Baumgärtner, Peter Valentin‐Weigand, Andreas Nerlich
Software Mentions: 1
Published: almost 5 years ago

10.1098/rsob.150172

Dr Jekyll and Mr Hyde: a strange case of 5-ethynyl-2′-deoxyuridine and 5-ethynyl-2′-deoxycytidine
Cited by: 17
Author(s): Anna Ligasová, Radek Liboska, David Friedecký, Kateřina Mičová, Tomáš Adam, Tomáš Oždian, Ivan Rosenberg, Karel Koberna
Software Mentions: 1
Published: almost 10 years ago

10.3390/nu9070714

Butyrate Reduces HFD-Induced Adipocyte Hypertrophy and Metabolic Risk Factors in Obese LDLr-/-.Leiden Mice
Cited by: 26
Author(s): Charlotte E. Pelgrim, Bart A. A. Franx, Jessica Snabel, Robert Kleemann, Ilse A.C. Arnoldussen, Amanda J. Kiliaan
Software Mentions: 1
Published: over 8 years ago

10.3390/mi12050550

Evaluation of the Effects of Solvents Used in the Fabrication of Microfluidic Devices on Cell Cultures
Cited by: 6
Author(s): Xiaopeng Wen, Seiichiro Takahashi, Kenji Hatakeyama, Ken‐ichiro Kamei
Software Mentions: 1
Published: over 4 years ago

10.3390/molecules22091516

Ginsenoside Rg3 Prevents Oxidative Stress-Induced Astrocytic Senescence and Ameliorates Senescence Paracrine Effects on Glioblastoma
Cited by: 25
Author(s): Jingang Hou, Sun Chang Kim, Chang‐Keun Sung, Chulhee Choi
Software Mentions: 1
Published: about 8 years ago

10.3390/molecules26185442

Uptake of Cell-Penetrating Peptide RL2 by Human Lung Cancer Cells: Monitoring by Electron Paramagnetic Resonance and Confocal Laser Scanning Microscopy
Cited by: 9
Author(s): Sergey S Ovcherenko, Olga Chinak, А. В. Чечушков, Sergey A. Dobrynin, Igor A. Kirilyuk, Olesya A. Krumkacheva, Vladimír Richter, Elena G. Bagryanskaya
Software Mentions: 1
Published: about 4 years ago

10.3390/molecules24183244

A Secreted Phospholipase A2 Induces Formation of Smooth Muscle Foam Cells Which Transdifferentiate to Macrophage-Like State
Cited by: 16
Author(s): Karina Cristina Giannotti, Sönke Weinert, Mariana Nascimento Viana, Elbio Leiguez, Thaís L.S. Araujo, Francisco Rafael Martins Laurindo, Bruno Lomonte, Ruediger C. Braun‐Dullaeus, Catarina Teixeira
Software Mentions: 1
Published: about 6 years ago

10.3390/molecules25040836

Rosmarinic Acid as a Candidate in a Phenotypic Profiling Cardio-/Cytotoxicity Cell Model Induced by Doxorubicin
Cited by: 7
Author(s): Qiao Zhang, Jing Li, Sha Peng, Yanling Zhang, Yanjiang Qiao
Software Mentions: 1
Published: almost 6 years ago

10.1016/j.molmet.2018.11.004

Hypothalamic POMC or MC4R deficiency impairs counterregulatory responses to hypoglycemia in mice
Cited by: 14
Author(s): Benjamin P. Tooke, Hui Yu, Jeffrey Adams, Graham L. Jones, Talisha Sutton-Kennedy, Lakshmi Mundada, Nathan Qi, Malcolm J. Low, Kavaljit H. Chhabra
Software Mentions: 1
Published: almost 7 years ago

10.1016/j.molmet.2015.02.003

Mice lacking neutral amino acid transporter B0AT1 (Slc6a19) have elevated levels of FGF21 and GLP-1 and improved glycaemic control
Cited by: 67
Author(s): Yang Jiang, Adam J. Rose, Tjeerd Sijmonsma, Angelika Bröer, Anja Pfenninger, Stephan Herzig, Dieter Schmoll, Stefan Bröer
Software Mentions: 1
Published: over 10 years ago

10.3390/mi10110781

Automated Analysis of Platelet Aggregation on Cultured Endothelium in a Microfluidic Chip Perfused with Human Whole Blood
Cited by: 9
Author(s): Hugo J. Albers, Robert Passier, Albert van den Berg, Andries D. van der Meer
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-021-88512-0

The Nek2 centrosome-mitotic kinase contributes to the mesenchymal state, cell invasion, and migration of triple-negative breast cancer cells
Cited by: 17
Author(s): Yainyrette Rivera-Rivera, Mihaela Marina, Shirley Jusino, Mi-Young Lee, Jaleisha Vélez Velázquez, Camille Chardón-Colón, Geraldine Vargas, Jaya Padmanabhan, Srikumar Chellappan, Harold I. Saavedra
Software Mentions: 1
Published: over 4 years ago

10.1007/s12035-017-0834-6

A Novel Ultrasensitive In Situ Hybridization Approach to Detect Short Sequences and Splice Variants with Cellular Resolution
Cited by: 49
Author(s): Larissa Erben, Min He, Annelies Laeremans, Emily Park, Andrés Buonanno
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-021-88497-w

Saccharomyces boulardii modulates oxidative stress and renin angiotensin system attenuating diabetes-induced liver injury in mice
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Author(s): Leticia Barssotti, Isabel Cristina Mallostro Emerich de Abreu, Ana Beatriz Pereira Brandão, Raquel Cristina Melo Ferreira de Albuquerque, Flávia Regina Ferreira, Miguel Angel Castillo Salgado, Danielle da Silva Dias, Kátia De Angelis, Rodrigo Yokota, Dulce Elena Casarini, Lívia Bruni de Souza, Carla Romano Taddei, Tatiana Sousa Cunha
Software Mentions: 1
Published: over 4 years ago

10.1002/1878-0261.12780

Distribution and prognostic significance of gluconeogenesis and glycolysis in lung cancer
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Author(s): Elisabeth Smolle, Petra Leko, Elvira Stacher‐Priehse, Luka Brčić, Amin El‐Heliebi, Lilli Hofmann, Franz Quehenberger, Andelko Hrzenjak, Helmut Popper, Horst Olschewski, Katharina Leithner
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-88966-2

Automatic wavelet-based 3D nuclei segmentation and analysis for multicellular embryo quantification
Cited by: 3
Author(s): Tzu‐Ching Wu, Xu Wang, Linlin Li, Ye Bu, David M. Umulis
Software Mentions: 1
Published: over 4 years ago

10.1016/j.mex.2015.02.007

Determination of collagen content within picrosirius red stained paraffin-embedded tissue sections using fluorescence microscopy
Cited by: 122
Author(s): Benjamin Vogel, Hanna Siebert, Ulrich Hofmann, Stefan Frantz
Software Mentions: 1
Published: almost 11 years ago

10.1088/2050-6120/aae6f8

Development of a fluorescence-based cellular apoptosis reporter
Cited by: 4
Author(s): Lucy A Balderstone, John C. Dawson, Arkadiusz Welman, Alan Serrels, Stephen R. Wedge, Valerie G. Brunton
Software Mentions: 1
Published: about 7 years ago

10.3390/metabo11060344

Hyperosmolarity Triggers the Warburg Effect in Chinese Hamster Ovary Cells and Reveals a Reduced Mitochondria Horsepower
Cited by: 6
Author(s): Jorgelindo da Veiga Moreira, Lenny De Staercke, Pablo César Martínez-Basilio, Sandrine Gauthier-Thibodeau, Léa Montégut, Laurent Schwartz, Mario Jolicœur
Software Mentions: 1
Published: over 4 years ago

10.15252/msb.20198983

A solid‐phase transfection platform for arrayed <scp>CRISPR</scp> screens
Cited by: 7
Author(s): Özdemirhan Serçin, Sabine Reither, Paris Roidos, Nadja Ballin, Spyridon Palikyras, Anna Baginska, Katrin Rein, Marı́a Llamazares, Aliaksandr Halavatyi, Hauke Winter, Thomas Muley, Renata Z. Jurkowska, Amir Abdollahi, Frank T. Zenke, Beate Neumann, Balca R. Mardin
Software Mentions: 1
Published: almost 6 years ago

10.15252/msb.20188322

Tumor‐stroma interactions differentially alter drug sensitivity based on the origin of stromal cells
Cited by: 26
Author(s): Benjamin Landry, Thomas Leete, Ryan Richards, Peter Cruz‐Gordillo, Hannah Schwartz, Megan E. Honeywell, Gary Ren, Alyssa D. Schwartz, Shelly R. Peyton, Michael J. Lee
Software Mentions: 1
Published: over 7 years ago

10.3390/metabo10060226

Restoration of Physiological Levels of Uric Acid and Ascorbic Acid Reroutes the Metabolism of Stored Red Blood Cells
Cited by: 12
Author(s): Manon Bardyn, Jingkui Chen, Michaël Dussiot, David Crettaz, L Schmid, Emmanuel Längst, Pascal Amireault, Jean‐Daniel Tissot, Mario Jolicœur, Michel Prudent
Software Mentions: 1
Published: over 5 years ago

10.15252/msb.20156458

Frequency modulation of <scp>ERK</scp> activation dynamics rewires cell fate
Cited by: 174
Author(s): Hyunryul Ryu, Minhwa Chung, Maciej Dobrzyński, Dirk Fey, Yannick Blum, Sung Sik Lee, Matthias Peter, Boris N. Kholodenko, Noo Li Jeon, Olivier Pertz
Software Mentions: 1
Published: about 10 years ago

10.1118/1.4966032

A preclinical microbeam facility with a conventional x-ray tube
Cited by: 19
Author(s): Stefan Bartzsch, Craig Cummings, Stephan Eismann, Uwe Oelfke
Software Mentions: 1
Published: about 9 years ago

10.3390/medicina56010024

Challenges and Opportunities in Preclinical Research of Synthetic Cannabinoids for Pain Therapy
Cited by: 16
Author(s): Bogdan Ionel Tamba, Gabriela Dumitrița Stanciu, Cristina M. Uritu, Elena Rezuş, Raluca Ştefănescu, Cosmin Teodor Mihai, Andrei Luca, Gabriela Rusu-Zota, Maria‐Magdalena Leon‐Constantin, Elena Cojocaru, Bogdan Gafton, Teodora Alexa-Stratulat
Software Mentions: 1
Published: almost 6 years ago

10.1016/j.mtbio.2020.100051

Additive manufactured, highly resilient, elastic, and biodegradable poly(ester)urethane scaffolds with chondroinductive properties for cartilage tissue engineering
Cited by: 18
Author(s): Sandra Camarero‐Espinosa, Clarissa Tomasina, Andrea Roberto Calore, Lorenzo Moroni
Software Mentions: 1
Published: over 5 years ago

10.3390/md18020088

The Marine Seagrass Halophila stipulacea as a Source of Bioactive Metabolites against Obesity and Biofouling
Cited by: 15
Author(s): Sawssen Bel Mabrouk, Mariana Reis, Maria Lígia Sousa, Tiago Ribeiro, Joana R. Almeida, Sandra Pereira, Jorge T. Antunes, Filipa Rosa, Vı́tor Vasconcelos, Lotfi Achour, Adnane Kacem, Ralph Urbatzka
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-021-90252-0

Antimicrobial responses of peripheral and central nervous system glia against Staphylococcus aureus
Cited by: 3
Author(s): Indra N. Choudhury, Anu Chacko, Ali Delbaz, Mo Chen, Souptik Basu, James Anthony St John, Flavia Huygens, Jenny Ekberg
Software Mentions: 1
Published: over 4 years ago

10.3390/md17040243

Broad-Spectrum Anti-Adhesive Coating Based on an Extracellular Polymer from a Marine Cyanobacterium
Cited by: 13
Author(s): Bruna Costa, Rita Mota, Paula Parreira, Paula Tamagnini, M. Cristina L. Martins, Fabíola Costa
Software Mentions: 1
Published: over 6 years ago

10.1098/rsob.170142

Characteristics of 29 novel atypical solute carriers of major facilitator superfamily type: evolutionary conservation, predicted structure and neuronal co-expression
Cited by: 41
Author(s): Emelie Perland, Sonchita Bagchi, Axel Klaesson, Robert Fredriksson
Software Mentions: 1
Published: about 8 years ago

10.15252/msb.20177551

Automated analysis of high‐content microscopy data with deep learning
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Author(s): Oren Kraus, Ben T. Grys, Jimmy Ba, Yolanda T. Chong, Brendan J. Frey, Charles Boone, Brenda Andrews
Software Mentions: 1
Published: over 8 years ago

10.3390/md17040229

Chlorophyll Derivatives from Marine Cyanobacteria with Lipid-Reducing Activities
Cited by: 26
Author(s): Sara Freitas, Natália Gonçalves Silva, Maria Lígia Sousa, Tiago Ribeiro, Filipa Rosa, Pedro N. Leão, Vı́tor Vasconcelos, Mariana Reis, Ralph Urbatzka
Software Mentions: 1
Published: over 6 years ago

10.3390/md14090158

Hierridin B Isolated from a Marine Cyanobacterium Alters VDAC1, Mitochondrial Activity, and Cell Cycle Genes on HT-29 Colon Adenocarcinoma Cells
Cited by: 28
Author(s): Sara Freitas, Rosário Martíns, Margarida Costa, Pedro N. Leão, Rui Vitorino, Vı́tor Vasconcelos, Ralph Urbatzka
Software Mentions: 1
Published: about 9 years ago

10.15252/msb.20177733

Cell‐specific responses to the cytokine <scp>TGF</scp> β are determined by variability in protein levels
Cited by: 51
Author(s): Jette Strasen, Uddipan Sarma, Marcel Jentsch, Stefan Bohn, Caibin Sheng, Daniel Horbelt, Petra Knaus, Stefan Legewie, Alexander Loewer
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-021-90701-w

Viral fibrotic scoring and drug screen based on MAPK activity uncovers EGFR as a key regulator of COVID-19 fibrosis
Cited by: 28
Author(s): Elmira Vagapova, Timofey Lebedev, Vladimir Prassolov
Software Mentions: 1
Published: over 4 years ago

10.1007/s00335-014-9522-2

3-Dimensional histological reconstruction and imaging of the murine pancreas
Cited by: 4
Author(s): Steven L. Ciciotte, Mark D. Lessard, Ellen C. Akeson, Elizabeth M. Cameron, Timothy M. Stearns, James M. Denegre, Jesús Ruberte, Karen L. Svenson
Software Mentions: 1
Published: over 11 years ago

10.15252/msb.20198947

Temporal perturbation of ERK dynamics reveals network architecture of FGF2/MAPK signaling
Cited by: 28
Author(s): Yannick Blum, Jan Mikelson, Maciej Dobrzyński, Hyunryul Ryu, Marc‐Antoine Jacques, Noo Li Jeon, Mustafa Khammash, Olivier Pertz
Software Mentions: 1
Published: about 6 years ago

10.26508/lsa.201800059

β-Tubulin carboxy-terminal tails exhibit isotype-specific effects on microtubule dynamics in human gene-edited cells
Cited by: 16
Author(s): Amelia L. Parker, Wee Siang Teo, Elvis Pandžić, Juan Jesus Vicente, Joshua A. McCarroll, Linda Wordeman, Maria Kavallaris
Software Mentions: 1
Published: over 7 years ago

10.26508/lsa.201900601

Oncogenic ALKF1174L drives tumorigenesis in cutaneous squamous cell carcinoma
Cited by: 4
Author(s): Marco Gualandi, Maria Iorio, Olivia Engeler, André Serra-Roma, Giuseppe Gasparre, Johannes H. Schulte, Daniel Hohl, Olga Shakhova
Software Mentions: 1
Published: over 5 years ago

10.1038/s41385-021-00437-z

Human small intestinal infection by SARS-CoV-2 is characterized by a mucosal infiltration with activated CD8+ T cells
Cited by: 48
Author(s): Malte Lehmann, Kristina Allers, C Heldt, Jenny Meinhardt, Franziska Schmidt, Yasmina Rodríguez-Sillke, Désirée Kunkel, Michael Schümann, Chotima Böttcher, Christiane Stahl–Hennig∥, Sefer Elezkurtaj, Christian Bojarski, Helena Radbruch, Victor M. Corman, Thomas Schneider, Christoph Loddenkemper, Verena Moos, Carl Weidinger, Anja A. Kühl, Britta Siegmund
Software Mentions: 1
Published: about 4 years ago

10.26508/lsa.201800255

The hypoxia-response pathway modulates RAS/MAPK–mediated cell fate decisions inCaenorhabditis elegans
Cited by: 12
Author(s): Sabrina Maxeiner, Janine Grolleman, Tobias Schmid, J.E. Kammenga, Alex Hajnal
Software Mentions: 1
Published: over 6 years ago

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