Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: CITE-seq-Count

https://packages.ecosyste.ms/registries/pypi.org/packages/CITE-seq-Count

A python package to map reads from CITE-seq or hashing data for single cell experiments
11 versions
Latest release: over 3 years ago
117 downloads last month

Papers Mentioning CITE-seq-Count 4

10.1016/j.medj.2021.01.006

Identifying CNS-colonizing T cells as potential therapeutic targets to prevent progression of multiple sclerosis
Cited by: 39
Author(s): Max Kaufmann, Hayley G. Evans, Anna-Lena Schaupp, Jan Broder Engler, Gurman Kaur, Anne Willing, Nina Kursawe, Charlotte Schubert, Kathrine E. Attfield, Lars Fugger, Manuel A. Friese
Software Mentions: 5
Published: over 3 years ago

10.1186/s13073-021-00885-z

Cryopreservation of human cancers conserves tumour heterogeneity for single-cell multi-omics analysis
Cited by: 24
Author(s): Sunny Z. Wu, Daniel Roden, Ghamdan Al-Eryani, Nenad Bartoniček, Kate Harvey, Aurélie Cazet, Chia-Ling Chan, Simon Junankar, Mun Hui, Ewan A. Millar, Julia Beretov, Lisa Kristina Horvath, Anthony M. Joshua, Phillip D. Stricker, James S. Wilmott, Camelia Quek, Georgina V. Long, Richard A. Scolyer, Bertrand Z. Yeung, Davendra Segara, Cindy Mak, Sanjay Warrier, Joseph E. Powell, Sandra A. O’Toole, Elgene Lim, Alexander Swarbrick
Software Mentions: 5
Published: over 3 years ago

10.3389/fimmu.2021.636720

Single Cell Analysis of Blood Mononuclear Cells Stimulated Through Either LPS or Anti-CD3 and Anti-CD28
Cited by: 29
Author(s): Nathan Lawlor, Djamel Nehar-Belaid, Jessica Grassmann, Marlon Stoeckius, Peter Smibert, Michael L. Stitzel, Virginia Pascual, Jacques Banchereau, Adam Williams, Duygu Ucar
Software Mentions: 2
Published: over 3 years ago

10.1186/s13059-020-01958-9

Linked optical and gene expression profiling of single cells at high-throughput
Cited by: 17
Author(s): Jesse Q. Zhang, Christian Siltanen, Leqian Liu, Kai‐Chun Chang, Zev J. Gartner, Adam R. Abate
Software Mentions: 2
Published: over 4 years ago