Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: CIM
https://packages.ecosyste.ms/registries/pypi.org/packages/CIM
Python implementation of the Common Information Model.
3 versions
Latest release: over 14 years ago
29 downloads last month
Papers Mentioning CIM 51
10.3390/plants10061149
QTL Mapping and Phenotypic Variation for Seedling Vigour Traits in Barley (Hordeum vulgare L.)Cited by: 7
Author(s): Ludovic J. A. Capo-chichi, Sharla Eldridge, Ammar Elakhdar, Takahiko Kubo, Robert Brueggeman, Anthony O. Anyia
Software Mentions: 6
Published: over 3 years ago
10.1186/1756-0381-5-19
Visualising associations between paired ‘omics’ data setsCited by: 211
Author(s): Ignacio González, Kim‐Anh Lê Cao, Melissa J. Davis, Sébastien Déjean
Software Mentions: 5
Published: about 12 years ago
10.1038/s41598-017-15625-w
A high-density consensus linkage map of white lupin highlights synteny with narrow-leafed lupin and provides markers tagging key agronomic traitsCited by: 49
Author(s): Michał Książkiewicz, Nelson Espinoza N., Huaan Yang, Matthew N. Nelson, Daniel Renshaw, Sandra Rychel, Barbara Ferrari, Maria Carelli, M. Tomaszewska, Stanisław Stawiński, B. Naganowska, B. Wolko, Paolo Annicchiarico
Software Mentions: 5
Published: about 7 years ago
10.1155/2016/6741418
An Interoperability Platform Enabling Reuse of Electronic Health Records for Signal Verification StudiesCited by: 10
Author(s): Mustafa Yuksel, Suat Gönül, Gökçe Banu Laleci Ertürkmen, Ali Anıl Sınacı, Paolo Invernizzi, Sara Facchinetti, Andrea Migliavacca, Tomas Bergvall, Kristof Depraetere, Jos De Roo
Software Mentions: 4
Published: almost 9 years ago
10.1371/journal.pone.0251745
Genome-wide association mapping reveals race-specific SNP markers associated with anthracnose resistance in carioca common beansCited by: 4
Author(s): Caléo Panhoca de Almeida, Jean Fausto de Carvalho Paulino, Caio Cesar Ferrari Barbosa, Gabriel de Moraes Cunha Gonçalves, Roberto Fritsche‐Neto, Sérgio Augusto Morais Carbonell, Alisson Fernando Chiorato, Luciana Lasry Benchimol-Reis
Software Mentions: 4
Published: over 3 years ago
10.1038/s41598-018-24998-5
Genetic mapping identifies loci that influence tomato resistance against Colorado potato beetlesCited by: 7
Author(s): Erandi Vargas‐Ortiz, Itay Gonda, John R. Smeda, Martha A. Mutschler, James J. Giovannoni, Georg Jander
Software Mentions: 3
Published: over 6 years ago
10.1186/1471-2105-6-168
High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID)Cited by: 258
Author(s): Barry R. Zeebèrg, Haiying Qin, Sudarshan Narasimhan, Margot Sunshine, Hong Yuan Cao, David W. Kane, Mark Reimers, Robert M. Stephens, David Bryant, Stanley K. Burt, Eldad Elnekave, Danielle M. Hari, Thomas A. Wynn, Charlotte Cunningham‐Rundles, Dawn Stewart, David E. Nelson, John N. Weinstein
Software Mentions: 3
Published: over 19 years ago
10.1371/journal.pone.0179947
Healthy aging of the left ventricle in relationship to cardiovascular risk factors: The Multi-Ethnic Study of Atherosclerosis (MESA)Cited by: 13
Author(s): Chia Ying Liu, Shenghan Lai, Nadine Kawel‐Boehm, Harjit Chahal, Bharath Ambale‐Venkatesh, João A.C. Lima, David A. Bluemke
Software Mentions: 3
Published: over 7 years ago
10.1371/journal.pone.0051202
QTL Analysis of Na+ and K+ Concentrations in Roots and Shoots under Different Levels of NaCl Stress in Rice (Oryza sativa L.)Cited by: 85
Author(s): Zhoufei Wang, Zhiwei Chen, Cheng Jiaan, Yanyan Lai, Jianfei Wang, Yongmei Bao, Ji Huang, Hongsheng Zhang
Software Mentions: 3
Published: almost 12 years ago
10.1186/1471-2156-12-19
A new mapping method for quantitative trait loci of silkwormCited by: 7
Author(s): Haiming Xu, Colin Wei, Yunting Tang, Zhiliang Zhu, Yang-Fu Sima, Xiang‐Yang Lou
Software Mentions: 3
Published: almost 14 years ago
10.1186/s12968-018-0448-9
A comparison of both DENSE and feature tracking techniques with tagging for the cardiovascular magnetic resonance assessment of myocardial strainCited by: 65
Author(s): Jie J Cao, Nora Ngai, Lynette Duncanson, Joshua Cheng, Kathleen Gliganic, Qizhi Chen
Software Mentions: 3
Published: over 6 years ago
10.1186/1532-429X-11-S1-P219
Evaluation of model-based contouring versus 2D segmentation for cardiac mass and volumesCited by: 0
Author(s): Andrew Segall, Cuilian Miao, Chia-Ying Liu, Patricia A. Cleary, João A.C. Lima, David A. Bluemke
Software Mentions: 3
Published: almost 16 years ago
10.1186/s12859-017-1908-1
MVQTLCIM: composite interval mapping of multivariate traits in a hybrid F1 population of outbred speciesCited by: 5
Author(s): Fenxiang Liu, Chunfa Tong, Shentong Tao, Jiyan Wu, Yuhua Chen, Dan Yao, Huogen Li, Jisen Shi
Software Mentions: 3
Published: almost 7 years ago
10.1371/journal.pone.0211775
A novel resistance gene for bacterial blight in rice, Xa43(t) identified by GWAS, confirmed by QTL mapping using a bi-parental populationCited by: 50
Author(s): Suk‐Man Kim, Russell Reinke
Software Mentions: 2
Published: almost 6 years ago
10.1016/j.dib.2017.02.021
An open data repository and a data processing software toolset of an equivalent Nordic grid model matched to historical electricity market dataCited by: 19
Author(s): Luigi Vanfretti, Svein H. Olsen, V.S. Narasimham Arava, Giuseppe Laera, Ali Bidadfar, Tin Rabuzin, Sigurd Hofsmo Jakobsen, Jan Lavenius, Maxime Baudette, Francisco José Goméz-López
Software Mentions: 2
Published: over 7 years ago
10.3389/fcvm.2021.728205
Systematic Comparison of Left Ventricular Geometry Between 3D-Echocardiography and Cardiac Magnetic Resonance ImagingCited by: 8
Author(s): Debbie Zhao, Gina M. Quill, Kathleen Gilbert, Vicky Y. Wang, Hélène Houle, Malcolm E. Legget, Peter Ruygrok, Robert N. Doughty, João Pedrosa, Jan D'hooge, Alistair A. Young, Martyn P. Nash
Software Mentions: 2
Published: about 3 years ago
10.3389/fcvm.2021.704611
Left Atrioventricular Coupling Index to Predict Incident Heart Failure: The Multi-Ethnic Study of AtherosclerosisCited by: 10
Author(s): Théo Pezel, Bharath Ambale Venkatesh, Yoko Kato, Henrique Doria De Vasconcellos, Susan R. Heckbert, Colin O. Wu, Wendy S. Post, David A. Bluemke, Alain Cohen‐Solal, Patrick Henry, João A.C. Lima
Software Mentions: 2
Published: about 3 years ago
10.3389/fpls.2017.00706
High Density Linkage Map Construction and Mapping of Yield Trait QTLs in Maize (Zea mays) Using the Genotyping-by-Sequencing (GBS) TechnologyCited by: 65
Author(s): Chengfu Su, Wei Wang, Shunliang Gong, Jinghui Zuo, Shujiang Li, Shizhong Xu
Software Mentions: 2
Published: over 7 years ago
10.1534/g3.113.006395
Quantitative Trait Locus and Haplotype Analyses of Wild and Crop-Mimic Traits in U.S. Weedy RiceCited by: 16
Author(s): Muhamad Shakirin Mispan, Lihua Zhang, Jiuhuan Feng, Xing‐You Gu
Software Mentions: 2
Published: over 11 years ago
10.1186/1532-429X-15-S1-P77
The effect of septal basal segments in the assessment of systolic dyssynchrony indexCited by: 0
Author(s): Avan Suinesiaputra, David A. Bluemke, Brett R. Cowan, Pau Medrano-Gracia, João A.C. Lima, Perry Radau, Alistair A. Young
Software Mentions: 2
Published: almost 12 years ago
10.1186/1532-429X-15-S1-P89
Optimal patient classification via statistical decomposition of a 3D left-ventricular atlasCited by: 0
Author(s): Pau Medrano-Gracia, Brett R. Cowan, David A. Bluemke, J. Paul Finn, Daniel Lee, João A.C. Lima, Avan Suinesiaputra, Alistair A. Young
Software Mentions: 2
Published: almost 12 years ago
10.1186/1532-429X-15-80
Atlas-based analysis of cardiac shape and function: correction of regional shape bias due to imaging protocol for population studiesCited by: 30
Author(s): Pau Medrano-Gracia, Brett R. Cowan, David A. Bluemke, J. Paul Finn, Alan H. Kadish, Daniel Lee, João A.C. Lima, Avan Suinesiaputra, Alistair A. Young
Software Mentions: 2
Published: about 11 years ago
10.1186/1532-429X-16-S1-P300
Comparisons of myocardial strain and strain rate in patients with heart failure with preserved and reduced ejection fraction using Feature Tracking of cine MR imagesCited by: 0
Author(s): Gangadhara Kabbli, Lynette Duncanson, Michael Passick, Joshua Cheng, Kathy Halloran, Jeannette McLaughlin, Jie J Cao
Software Mentions: 2
Published: almost 11 years ago
10.1186/1532-429X-16-S1-P239
Comparison of myocardial mechanical properties in patients with dilated cardiomyopathy with and without acute heart failureCited by: 0
Author(s): Naila Choudhary, Gangadhara Kabbli, Lynette Duncanson, Michael Passick, Kathy Halloran, Jie J Cao
Software Mentions: 2
Published: almost 11 years ago
10.1186/1532-429X-16-S1-P381
Accuracy of compressed sensing for left ventricular mass and volumesCited by: 0
Author(s): Suzanne Lydiard, Andreas Greiser, Michaela Schmidt, Michael O. Zenge, Mariappan S. Nadar, Alistair A. Young, Brett R. Cowan
Software Mentions: 2
Published: almost 11 years ago
10.1186/1532-429X-16-S1-P298
Evaluation of diastolic function by cardiac MRI in hypertrophic cardiomyopathy: validation of 3D model-based analysis of left ventricular filling curvesCited by: 0
Author(s): Linda C. Chu, Celia P. Corona‐Villalobos, Neville Gai, David A. Bluemke, Marcelo Souto Nacif, Alistair A. Young, Theodore P. Abraham, Ihab R. Kamel, Stefan L. Zimmerman
Software Mentions: 2
Published: almost 11 years ago
10.1186/1532-429X-16-S1-W37
Inter-observer variability of LV mass and volumes with compressed sensingCited by: 0
Author(s): Suzanne Lydiard, Andreas Greiser, Michaela Schmidt, Mariappan S. Nadar, Brett R. Cowan, Alistair A. Young
Software Mentions: 2
Published: almost 11 years ago
10.1186/s12968-014-0056-2
Left ventricular shape variation in asymptomatic populations: the multi-ethnic study of atherosclerosisCited by: 73
Author(s): Pau Medrano-Gracia, Brett R. Cowan, Bharath Ambale‐Venkatesh, David A. Bluemke, John Eng, J. Paul Finn, Carissa G. Fonseca, João A.C. Lima, Avan Suinesiaputra, Alistair A. Young
Software Mentions: 2
Published: over 10 years ago
10.1186/1532-429X-18-S1-P186
Left ventricular shape variation in patients with aortic coarctation pre- and post-stent implantationCited by: 0
Author(s): AK Ortiz, Avan Suinesiaputra, Alistair A. Young, Genevieve Farrar, Beth F. Printz, Jeff Omens, Andrew D. McCulloch, James C. Perry, Sanjeet Hegde
Software Mentions: 2
Published: almost 9 years ago
10.1186/1532-429X-18-S1-O79
MRI feature tracking strain profiles distinguish patients with left ventricular systolic and diastolic dysfunction with and without clinical heart failureCited by: 1
Author(s): Naila Choudhary, Lynette Duncanson, Javed Butler, Nathaniel Reichek, Timothy J. Vittorio, Alistair A. Young, Jie J Cao
Software Mentions: 2
Published: almost 9 years ago
10.1186/s12968-017-0420-0
Left Atrial structure and function in hypertrophic cardiomyopathy sarcomere mutation carriers with and without left ventricular hypertrophyCited by: 34
Author(s): Hoshang Farhad, Sara B. Seidelmann, Davis M. Vigneault, Siddique Abbasi, Eunice Yang, Sharlene M. Day, Steven D. Colan, Mark W. Russell, Jeffrey A. Towbin, Mark V. Sherrid, Charles E. Canter, Lei Shi, Michael Jerosch‐Herold, David A. Bluemke, Carolyn Y. Ho, Tomas G. Neilan
Software Mentions: 2
Published: almost 7 years ago
10.1186/1532-429X-11-S1-P52
The relationship of left ventricular function to infarct surface area and volumeCited by: 0
Author(s): Al-Hakim Ramsey, Michael C. Fishbein, Thomas O’Donnell, James W. Sayre, Kalyanam Shivkumar, Alan H. Kadish, Paul Finn, Carissa G. Fonseca
Software Mentions: 2
Published: almost 16 years ago
10.3390/polym12112746
Unique Slow Crack Growth Behavior of Isotactic Polypropylene: The Role of Shear Layer-Spherulites Layer Alternated StructureCited by: 1
Author(s): Mingjin Liu, Jiaxu Luo, Jin Chen, Xueqin Gao, Qiang Fu, Jie Zhang
Software Mentions: 2
Published: about 4 years ago
10.1148/ryct.2020190032
Fully Automated Myocardial Strain Estimation from Cardiovascular MRI–tagged Images Using a Deep Learning Framework in the UK BiobankCited by: 26
Author(s): Edward Ferdian, Avan Suinesiaputra, Kenneth Fung, Nay Aung, Elena Lukaschuk, Ahmet Barutçu, Edd Maclean, José Miguel Paiva, Stefan K. Piechnik, Stefan Neubauer, Steffen E. Petersen, Alistair A. Young
Software Mentions: 2
Published: almost 5 years ago
10.1038/s41598-018-36104-w
Fine mapping and discovery of candidate genes for seed size in watermelon by genome survey sequencingCited by: 22
Author(s): Na Li, Jianli Shang, Jiming Wang, Dan Zhou, MA Shuang-wu
Software Mentions: 2
Published: almost 6 years ago
10.1038/s41598-019-56903-z
Seed protein content and its relationships with agronomic traits in pigeonpea is controlled by both main and epistatic effects QTLsCited by: 14
Author(s): Jimmy Obala, Rachit K. Saxena, Vikas K. Singh, Sandip M. Kale, Vanika Garg, C.V. Sameer Kumar, K. B. Saxena, Pangirayi Tongoona, Julia Sibiya, Rajeev K. Varshney
Software Mentions: 2
Published: almost 5 years ago
10.3390/s20216134
Deep Learning-Based Spread-Spectrum FGSM for Underwater CommunicationCited by: 3
Author(s): Zeyad A. H. Qasem, Hamada Esmaiel, Haixin Sun, Jie Qi, Junfeng Wang
Software Mentions: 2
Published: about 4 years ago
10.1093/aobpla/plw022
Genomic architecture of phenotypic divergence between two hybridizing plant species along an elevational gradientCited by: 10
Author(s): Adrian C. Brennan, Simon J. Hiscock, Richard J. Abbott
Software Mentions: 2
Published: over 9 years ago
10.1186/2044-5040-2-17
Altered sodium channel-protein associations in critical illness myopathyCited by: 14
Author(s): Susan D. Kraner, Kevin R. Novak, Qingbo Wang, Junmin Peng, Mark M. Rich
Software Mentions: 2
Published: about 12 years ago
10.5935/abc.20170063
Three-Dimensional Volumetric Assessment of Diastolic Function by Cardiac Magnetic Resonance Imaging: The Multi-Ethnic Study of Atherosclerosis (MESA)Cited by: 7
Author(s): Marcelo Souto Nacif, André Luiz Cerqueira de Almeida, Alistair A. Young, Brett R. Cowan, Anderson C. Armstrong, Eunice Yang, Christopher T. Sibley, W. Gregory Hundley, Songtao Liu, João A.C. Lima, David A. Bluemke
Software Mentions: 2
Published: almost 8 years ago
10.1186/s12913-017-2388-8
Sustainability in Health care by Allocating Resources Effectively (SHARE) 7: supporting staff in evidence-based decision-making, implementation and evaluation in a local healthcare settingCited by: 21
Author(s): Claire Harris, Kelly Allen, Cara Waller, Tim Dyer, Vanessa Brooke, Marie Garrubba, Angela Melder, Catherine Voutier, Anthony Gust, Dina Farjou
Software Mentions: 2
Published: over 7 years ago
10.1186/1471-2202-16-S1-P300
Functional identification of complex cells from spike times and the decoding of visual stimuliCited by: 0
Author(s): Aurel A. Lazar, Nikul H. Ukani, Yiyin Zhou
Software Mentions: 2
Published: almost 9 years ago
10.3390/bs10010033
Associations of Patient Mood, Modulators of Quality of Life, and Pharmaceuticals with Amyotrophic Lateral Sclerosis Survival DurationCited by: 20
Author(s): Leila Bond, Gloria Bowen, Benjamin Mertens, Keelie Denson, Kathleen S. Jordan, Branislav Vidakovic, Cassie S. Mitchell
Software Mentions: 2
Published: almost 5 years ago
10.1186/1475-925X-11-13
Design and testing of an MRI-compatible cycle ergometer for non-invasive cardiac assessments during exerciseCited by: 36
Author(s): Silmara Gusso, Carlo Salvador, Paul Hofman, Wayne S. Cutfield, James C. Baldi, Andrew J. Taberner, Poul Nielsen
Software Mentions: 2
Published: over 12 years ago
10.1155/2014/623836
Translation and Initial Validation of the Chinese (Cantonese) Version of Community Integration Measure for Use in Patients with Chronic StrokeCited by: 20
Author(s): Tai Wa Liu, Ssm Ng, Gabriel Y.F. Ng
Software Mentions: 2
Published: almost 11 years ago
10.1186/s40959-020-00069-5
Atlas-based measures of left ventricular shape may improve characterization of adverse remodeling in anthracycline-exposed childhood cancer survivors: a cross-sectional imaging studyCited by: 1
Author(s): Hari K. Narayan, Ronghui Xu, Nickolas Forsch, Sachin Govil, David Iukuridze, Lanie Lindenfeld, Emanuel Adler, Sanjeet Hegde, Adriana H. Tremoulet, Bonnie Ky, Saro H. Armenian, Jeffrey H. Omens, Andrew D. McCulloch
Software Mentions: 2
Published: over 4 years ago
10.1186/1476-7120-7-55
Baseline and follow-up assessment of regional left ventricular volume using 3-dimensional echocardiography: comparison with cardiac magnetic resonanceCited by: 11
Author(s): Carly Jenkins, Thomas H. Marwick
Software Mentions: 2
Published: about 15 years ago
10.14814/phy2.13104
Increased cardiac work provides a link between systemic hypertension and heart failureCited by: 12
Author(s): Andy Wilson, Vicky Y. Wang, Gregory B. Sands, Alistair A. Young, Martyn P. Nash, Ian J. LeGrice
Software Mentions: 2
Published: almost 8 years ago
10.1371/journal.pone.0110243
Atlas-Based Quantification of Cardiac Remodeling Due to Myocardial InfarctionCited by: 67
Author(s): Xingyu Zhang, Brett R. Cowan, David A. Bluemke, J. Paul Finn, Carissa G. Fonseca, Alan H. Kadish, Daniel Lee, João A.C. Lima, Avan Suinesiaputra, Alistair A. Young, Pau Medrano-Gracia
Software Mentions: 2
Published: about 10 years ago
10.1371/journal.pone.0119389
Construction of an Interspecific Genetic Map Based on InDel and SSR for Mapping the QTLs Affecting the Initiation of Flower Primordia in Pepper (Capsicum spp.)Cited by: 31
Author(s): Suxu Tan, Jimin Cheng, Li Zhang, Cheng Qin, Nong Ding-guo, Weipeng Li, Xin Tang, Zhiming Wu, Kailin Hu
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0183437
Multi-scale modelling to evaluate building energy consumption at the neighbourhood scaleCited by: 58
Author(s): Dasaraden Mauree, Silvia Coccolo, Jérôme Kaempf, Jean-Louis Scartezzini
Software Mentions: 2
Published: about 7 years ago