pypi: CDF | Projects | Ecosyste.ms: Papers

10.1534/g3.112.004283

Transcriptional Networks Controlling the Cell Cycle
Cited by: 24
Author(s): Martin Bonke, Mikko Turunen, Maria Sokolova, Anna Vähärautio, Teemu Kivioja, Minna Taipale, Mikael Björklund, Jussi Taipale
Software Mentions: 6
Published: almost 12 years ago

10.1186/s13059-016-1097-7

Rare and common epilepsies converge on a shared gene regulatory network providing opportunities for novel antiepileptic drug discovery
Cited by: 64
Author(s): Andrée Delahaye‐Duriez, Prashant K. Srivastava, Kirill Shkura, Sarah R. Langley, Liisi Laaniste, Aida Moreno‐Moral, Bénédicte Danis, Manuela Mazzuferi, Patrik Foerch, Elena V. Gazina, Kay Richards, Steven Petrou, Rafał M. Kamiński, Enrico Petretto, Michael R. Johnson
Software Mentions: 5
Published: almost 8 years ago

10.1371/journal.pone.0058572

Small Hydrophobic Protein of Human Metapneumovirus Does Not Affect Virus Replication and Host Gene Expression In Vitro
Cited by: 19
Author(s): Miranda de Graaf, Sander Herfst, Jamil Aarbiou, Peter C. Burgers, Fatiha Zaaraoui-Boutahar, M Bijl, Wilfred F. J. van IJcken, Eefje J. A. Schrauwen, Albert D. M. E. Osterhaus, Theo M. Luider, Bob J. Scholte, Ron A. M. Fouchier, Arno C. Andeweg
Software Mentions: 5
Published: over 11 years ago

10.1186/1471-2105-11-221

GATExplorer: Genomic and Transcriptomic Explorer; mapping expression probes to gene loci, transcripts, exons and ncRNAs
Cited by: 77
Author(s): Alberto Risueño, Celia Fontanillo, Marcel E. Dinger, Javier De Las Rivas
Software Mentions: 5
Published: over 14 years ago

10.1038/s41598-021-82853-6

Transcriptome comparisons of in vitro intestinal epithelia grown under static and microfluidic gut-on-chip conditions with in vivo human epithelia
Cited by: 19
Author(s): Kornphimol Kulthong, Guido Hooiveld, Loes P. M. Duivenvoorde, Ignacio Miro Estruch, Victor Augustus Marin, Meike van der Zande, Hans Bouwmeester
Software Mentions: 4
Published: almost 4 years ago

10.3390/cells9071608

Latest Developed Strategies to Minimize the Off-Target Effects in CRISPR-Cas-Mediated Genome Editing
Cited by: 218
Author(s): Muhammad Naeem, Saman Majeed, Mubasher Zahir Hoque, Irshad Ahmad
Software Mentions: 3
Published: over 4 years ago

10.1038/s41598-019-40857-3

Profiling of gallbladder carcinoma reveals distinct miRNA profiles and activation of STAT1 by the tumor suppressive miRNA-145-5p
Cited by: 23
Author(s): Benjamin Goeppert, Felicia Truckenmueller, Alessandro Ori, Valerie Fritz, Thomas Albrecht, Angelika Fraas, Dominique Scherer, Rosa González Silos, Carsten Sticht, Norbert Gretz, Arianeb Mehrabi, Melanie Bewerunge-Hudler, Stefan Pusch, Justo Lorenzo Bermejo, Péter Dietrich, Peter Schirmacher, Marcus Renner, Stephanie Roessler
Software Mentions: 3
Published: over 5 years ago

10.1186/1471-2164-15-662

The synthetic glucocorticoids prednisolone and dexamethasone regulate the same genes in acute lymphoblastic leukemia cells
Cited by: 21
Author(s): Daniel Bindreither, Simone Ecker, Barbara Gschirr, Anita Kofler, Reinhard Kofler, Johannes Michael Rainer
Software Mentions: 2
Published: over 10 years ago

10.3390/antiox9080701

Circuits Regulating Superoxide and Nitric Oxide Production and Neutralization in Different Cell Types: Expression of Participating Genes and Changes Induced by Ionizing Radiation
Cited by: 4
Author(s): Patryk Bil, Sylwia Ciesielska, Roman Jaksik, Joanna Rzeszowska-Wolny
Software Mentions: 2
Published: over 4 years ago

10.1038/srep33847

Gene expression profiling reveals aryl hydrocarbon receptor as a possible target for photobiomodulation when using blue light
Cited by: 36
Author(s): A. Becker, Anna Klapczynski, Natalia Kuch, Fabiola Arpino, Katja Simon-Keller, Carolina De La Torre, Carsten Sticht, F. A. van Abeelen, G. Oversluizen, Norbert Gretz
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-017-17307-z

IL-4 driven transcription factor FoxQ1 is expressed by monocytes in atopic dermatitis and stimulates monocyte migration
Cited by: 13
Author(s): Ilja Ovsiy, Vladimir Riabov, Ioannis Manousaridis, Julia Michel, Kondaiah Moganti, Shuiping Yin, Tengfei Liu, Carsten Sticht, Elisabeth Kremmer, Martin C. Harmsen, Sergij Goerdt, Alexei Gratchev, Julia Kzhyshkowska
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-37937-1

Methylglyoxal down-regulates the expression of cell cycle associated genes and activates the p53 pathway in human umbilical vein endothelial cells
Cited by: 19
Author(s): Jana D. Braun, Diego O. Pastene, Annette Breedijk, Angelica Rodriguez, Björn B. Hofmann, Carsten Sticht, Elke von Ochsenstein, Heike Allgayer, Jacob van den Born, Stephan J. L. Bakker, Sibylle J. Hauske, Bernhard K. Krämer, Benito A. Yard, Thomas Albrecht
Software Mentions: 1
Published: almost 6 years ago

10.1007/s00109-020-01957-0

Human carnosinase 1 overexpression aggravates diabetes and renal impairment in BTBROb/Ob mice
Cited by: 7
Author(s): Jiedong Qiu, Thomas Albrecht, Shiqi Zhang, Sibylle J. Hauske, Angelica Rodriguez-Niño, Xinmiao Zhang, Darya Nosan, Diego O. Pastene, Carsten Sticht, Carolina Delatorre, Harry van Goor, Štefan Porubský, Bernhard K. Krämer, Benito A. Yard
Software Mentions: 1
Published: over 4 years ago

10.7554/eLife.19469

Factors essential for L,D-transpeptidase-mediated peptidoglycan cross-linking and β-lactam resistance in Escherichia coli
Cited by: 120
Author(s): Jean-Emmanuel Hugonnet, Dominique Mengin‐Lecreulx, Alejandro Monton, Tanneke den Blaauwen, Étienne Carbonnelle, Carole Veckerlé, Yves V. Brun, Michael van Nieuwenhze, Christiane Bouchier, Kuyek Tu, Louis B. Rice, Michel Arthur
Software Mentions: 1
Published: about 8 years ago

10.7554/eLife.46393

High-throughput, single-particle tracking reveals nested membrane domains that dictate KRasG12D diffusion and trafficking
Cited by: 38
Author(s): Yerim Lee, Carey Phelps, Tao Huang, Barmak Mostofian, Lei Wu, Ying Zhang, Kai Tao, Young Hwan Chang, Philip J.S. Stork, Joe W. Gray, Daniel M. Zuckerman, Xiaolin Nan
Software Mentions: 1
Published: about 5 years ago

10.18632/oncotarget.8857

Stabilin-1 is expressed in human breast cancer and supports tumor growth in mammary adenocarcinoma mouse model
Cited by: 43
Author(s): Vladimir Riabov, Shuiping Yin, Bin Song, Aida Avdic, Kai Schledzewski, Ilja Ovsiy, Alexei Gratchev, Maria Llopis Verdiell, Carsten Sticht, Christina Schmuttermaier, Hiltrud Schönhaber, Christel Weiß, Alan P. Fields, Katja Simon-Keller, Frederick Pfister, Sebastian Berlit, Alexander Marx, Bernd Arnold, Sergij Goerdt, Julia Kzhyshkowska
Software Mentions: 1
Published: over 8 years ago

10.18632/oncotarget.13887

LEF1 reduces tumor progression and induces myodifferentiation in a subset of rhabdomyosarcoma
Cited by: 11
Author(s): Julia Dräger, Katja Simon-Keller, Tobias Pukrop, Florian Klemm, Jőrg Wilting, Carsten Sticht, Kai Dittmann, Matthias Schulz, Ivo Leuschner, Alexander Marx, Heidi Hahn
Software Mentions: 1
Published: almost 8 years ago

10.1186/1471-2369-11-23

Cyst formation in the PKD2 (1-703) transgenic rat precedes deregulation of proliferation-related pathways
Cited by: 14
Author(s): Panayiota Koupepidou, Kyriacos Felekkis, Bettina Kränzlin, Carsten Sticht, Norbert Gretz, Constantinos Deltas
Software Mentions: 1
Published: about 14 years ago

10.3390/molecules26082118

Intrinsically Disordered Proteins as Regulators of Transient Biological Processes and as Untapped Drug Targets
Cited by: 13
Author(s): Yusuke Hosoya, Junko Ohkanda
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0099298

N-Octanoyl Dopamine Treatment of Endothelial Cells Induces the Unfolded Protein Response and Results in Hypometabolism and Tolerance to Hypothermia
Cited by: 6
Author(s): Eleni Stamellou, Johann Fontana, Johannes Wedel, Emmanouil Ntasis, Carsten Sticht, A. Becker, Prama Pallavi, K. L. Wolf, Bernhard K. Krämer, Mathias Hafner, Willem J. van Son, Benito A. Yard
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0118534

Brown Adipose Tissue Harbors a Distinct Sub-Population of Regulatory T Cells
Cited by: 58
Author(s): Daša Medříková, Tjeerd Sijmonsma, Katharina Sowodniok, David M. Richards, Michael Delacher, Carsten Sticht, Norbert Gretz, Tobias Schafmeier, Markus Feuerer, Stephan Herzig
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0044561

Fetal Mesenchymal Stromal Cells Differentiating towards Chondrocytes Acquire a Gene Expression Profile Resembling Human Growth Plate Cartilage
Cited by: 19
Author(s): Sandy A. van Gool, Joyce Emons, Jeroen Leijten, Eva L. Decker, Carsten Sticht, Hans C. van Houwelingen, Jelle J. Goeman, Carin Kleijburg, Sicco A. Scherjon, Norbert Gretz, Jan M. Wit, Gudrun Rappold, Janine N. Post, Marcel Karperien
Software Mentions: 1
Published: about 12 years ago

10.1038/s41419-019-2010-6

ADP secreted by dying melanoma cells mediates chemotaxis and chemokine secretion of macrophages via the purinergic receptor P2Y12
Cited by: 17
Author(s): Loreen Kloss, Claudia Dollt, Kai Schledzewski, Andreas Krewer, Susanne Melchers, Calin Manta, Carsten Sticht, Carolina De La Torre, Jochen Utikal, Viktor Umansky, Astrid Schmieder
Software Mentions: 1
Published: about 5 years ago

10.15252/emmm.201404837

Transcriptional co‐factor Transducin beta‐like (<scp>TBL</scp>) 1 acts as a checkpoint in pancreatic cancer malignancy
Cited by: 11
Author(s): Christian Stoy, Aishwarya Sundaram, Marcos Ríos García, Xiaoyue Wang, Oksana Seibert, Annika Zota, Susann Wendler, David Männle, Ulf Hinz, Carsten Sticht, Maria Muciek, Norbert Gretz, Adam J. Rose, Vera Greiner, Thomas G. Hofmann, Andrea S. Bauer, Jöerg Hoheisel, Mauricio Berriel Díaz, Matthias M. Gaida, Jens Werner, Tobias Schafmeier, Oliver Strobel, Stephan Herzig
Software Mentions: 1
Published: over 9 years ago

10.15252/embr.201949651

Transient deSUMOylation of IRF2BP proteins controls early transcription in EGFR signaling
Cited by: 12
Author(s): Sina V. Barysch, Nicolas Stankovic‐Valentin, Tim Miedema, Samir Karaca, Judith Doppel, Thiziri Nait Achour, Aarushi Vasudeva, Lucie Wolf, Carsten Sticht, Henning Urlaub, Frauke Melchior
Software Mentions: 1
Published: almost 4 years ago

Ecosyste.ms: Papers

Projects: pypi: CDF

Papers Mentioning CDF 26