Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: CAI
https://packages.ecosyste.ms/registries/pypi.org/packages/CAI
Python implementation of codon adaptation index
7 versions
Latest release: about 6 years ago
116 downloads last month
Papers Mentioning CAI 11
10.1186/1471-2164-15-793
Genome organisation of the Acinetobacter lytic phage ZZ1 and comparison with other T4-like Acinetobacter phagesCited by: 12
Author(s): Jing Jin, Zhenjiang Li, Shuwei Wang, Shanmei Wang, Song-Jian Chen, Huang Dehai, Zhang Gai, Yahui Li, Xiaoting Wang, Jin Wang, Guoqiang Zhao
Software Mentions: 1
Published: almost 11 years ago
10.1186/s12903-019-0746-0
Computer-assisted, template-guided immediate implant placement and loading in the mandible: a case reportCited by: 17
Author(s): Thomas Spielau, Uli Hauschild, Joannis Katsoulis
Software Mentions: 1
Published: over 5 years ago
10.1186/s13068-019-1490-z
Biological conversion of methane to putrescine using genome-scale model-guided metabolic engineering of a methanotrophic bacterium Methylomicrobium alcaliphilum 20ZCited by: 33
Author(s): Linh Thanh Nguyen, Eun Yeol Lee
Software Mentions: 1
Published: over 5 years ago
10.1002/mbo3.21
A theoretical and experimental proteome map of<i>Pseudomonas aeruginosa</i>PAO1Cited by: 8
Author(s): Elke Lecoutere, Peter Verleyen, Steven Haenen, Katrien Vandersteegen, Jean-Paul Noben, Johan Robben, Liliane Schoofs, Pieter‐Jan Ceyssens, Guido Volckaert, Rob Lavigne
Software Mentions: 1
Published: over 12 years ago
10.1002/mbo3.452
A comprehensive phylogenetic analysis of copper transporting P<sub>1B</sub>ATPases from bacteria of the<i>Rhizobiales</i>order uncovers multiplicity, diversity and novel taxonomic subtypesCited by: 9
Author(s): Ciro Cubillas, Fabiola Miranda-Sánchez, Antonio Jesús González-Sánchez, José Pedro Elizalde, Pablo Vinuesa, Susana Brom, Alejandro García‐de los Santos
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pcbi.1000035
A Quick Guide for Computer-Assisted Instruction in Computational Biology and BioinformaticsCited by: 14
Author(s): Manuel João Costa, Eduardo Galembeck, Guilherme Andrade Marson, Bayardo Baptista Torres
Software Mentions: 1
Published: over 16 years ago
10.1371/journal.pone.0205823
Cell colony counter called CoCoNutCited by: 13
Author(s): Mattia Siragusa, Stefano Dall’Olio, Pil M. Fredericia, Mikael Jensen, Torsten Groesser
Software Mentions: 1
Published: about 6 years ago
10.3389/fgene.2020.00293
Transcriptional Activity and Protein Levels of Horizontally Acquired Genes in Yeast Reveal Hallmarks of Adaptation to Fermentative EnvironmentsCited by: 11
Author(s): Joaquín Devia, Camila Bastías, Eduardo I. Kessi-Pérez, Carlos A. Villarroel, Matteo De Chiara, Francisco A. Cubillos, Gianni Liti, Claudio Martı́nez, F. Salinas
Software Mentions: 1
Published: over 4 years ago
10.3390/polym10020143
Vacuum Thermoforming Process: An Approach to Modeling and Optimization Using Artificial Neural NetworksCited by: 18
Author(s): Wanderson de Oliveira Leite, Juan Carlos Campos Rubio, Francisco Mata Cabrera, Angeles Carrasco, Imam Hanafi
Software Mentions: 1
Published: almost 7 years ago
10.1038/srep38892
Subtype-specific structural constraints in the evolution of influenza A virus hemagglutinin genesCited by: 27
Author(s): Alexander P. Gultyaev, Monique I. Spronken, Mathilde Richard, Eefje J. A. Schrauwen, René C. L. Olsthoorn, Ron A. M. Fouchier
Software Mentions: 1
Published: almost 8 years ago
10.1186/2193-1801-2-492
Mutational pressure dictates synonymous codon usage in freshwater unicellular α - cyanobacterial descendant Paulinella chromatophora and β - cyanobacterium Synechococcus elongatus PCC6301Cited by: 16
Author(s): Rahul Raveendran Nair, Manivasagam Bharatha Nandhini, Thilaga Sethuraman, D. Ganesh
Software Mentions: 1
Published: about 11 years ago