pypi: Bayesian | Projects | Ecosyste.ms: Papers

10.1186/s12863-017-0576-5

Evaluation of methods and marker Systems in Genomic Selection of oil palm (Elaeis guineensis Jacq.)
Cited by: 14
Author(s): Qi Bin Kwong, Chee Keng Teh, Ai Ling Ong, Fook Tim Chew, Sean Mayes, Harikrishna Kulaveerasingam, Martti T. Tammi, Suat Hui Yeoh, David R. Appleton, Jennifer Ann Harikrishna
Software Mentions: 7
Published: almost 7 years ago

10.1186/s12862-017-0968-1

Distinct genetic differentiation and species diversification within two marine nematodes with different habitat preference in Antarctic sediments
Cited by: 21
Author(s): Freija Hauquier, Frédérik Leliaert, Annelien Rigaux, Sofie Derycke, Ann Vanreusel
Software Mentions: 5
Published: over 7 years ago

10.1038/s41598-018-37749-3

The effect of interventions on the transmission and spread of HIV in South Africa: a phylodynamic analysis
Cited by: 8
Author(s): Eduan Wilkinson, Dennis Maletich Junqueira, Richard Lessells, Susan Engelbrecht, Gert van Zyl, Túlio de Oliveira, Marco Salemi
Software Mentions: 3
Published: over 5 years ago

10.1186/1471-2105-15-90

Consistency of metagenomic assignment programs in simulated and real data
Cited by: 18
Author(s): Koldo Garcia-Etxebarria, Marc García-Garcerá, Francesc Calafell
Software Mentions: 3
Published: over 10 years ago

10.3389/fpls.2019.01337

Genetic Dissection of Snow Mold Tolerance in US Pacific Northwest Winter Wheat Through Genome-Wide Association Study and Genomic Selection
Cited by: 17
Author(s): Dennis N. Lozada, Jayfred Godoy, Timothy Murray, Brian P. Ward, Arron H. Carter
Software Mentions: 3
Published: about 5 years ago

10.1186/s12864-020-06877-4

Pervasive duplication, biased molecular evolution and comprehensive functional analysis of the PP2C family in Glycine max
Cited by: 4
Author(s): Kai Fan, Yunrui Chen, Zhijun Mao, Fang Yao, Zhaowei Li, Weiwei Lin, Yongqiang Zhang, Jianping Liu, Jinwen Huang
Software Mentions: 3
Published: over 4 years ago

10.7717/peerj.7853

Complete mitochondrial genome sequence of<i>Labriocimbex sinicus</i>, a new genus and new species of Cimbicidae (Hymenoptera) from China
Cited by: 9
Author(s): Yan YuChen, Gengyun Niu, Yaoyao Zhang, Qianying Ren, Shiyu Du, Bocheng Lan, Meicai Wei
Software Mentions: 3
Published: about 5 years ago

10.1371/journal.pone.0217164

Three genetically distinct ferlaviruses have varying effects on infected corn snakes (Pantherophis guttatus)
Cited by: 7
Author(s): Michael Pees, Volker Schmidt, Tibor Papp, Ákos Gellért, Maha Diekan Abbas, J. Matthias Starck, Annkatrin Neul, Rachel E. Marschang
Software Mentions: 3
Published: over 5 years ago

10.2471/BLT.20.253591

Variant analysis of SARS-CoV-2 genomes
Cited by: 435
Author(s): Takahiko Koyama, Daniel E. Platt, Laxmi Parida
Software Mentions: 3
Published: over 4 years ago

10.1002/ece3.3023

Historical demography and genetic differentiation of the giant freshwater prawn<i>Macrobrachium rosenbergii</i>in Bangladesh based on mitochondrial and ddRAD sequence variation
Cited by: 6
Author(s): M. M. Mahbub Alam, Kristen M. Westfall, Snæbjörn Pálsson
Software Mentions: 2
Published: over 7 years ago

10.1186/s12862-018-1137-x

Phylogeny with introgression in Habronattus jumping spiders (Araneae: Salticidae)
Cited by: 27
Author(s): Geneviève Leduc-Robert, Wayne P. Maddison
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pgen.1006296

Genome-Wide Interaction Analyses between Genetic Variants and Alcohol Consumption and Smoking for Risk of Colorectal Cancer
Cited by: 37
Author(s): Jian Gong, Carolyn M. Hutter, Polly A. Newcomb, Cornelia M. Ulrich, Stephanie A. Bien, Peter T. Campbell, John A. Baron, Sonja I. Berndt, Stéphane Bézieau, Hermann Brenner, Graham Casey, Andrew T. Chan, Jenny Chang–Claude, Mengmeng Du, David Duggan, Jane C. Figueiredo, Steven Gallinger, Edward Giovannucci, Robert W. Haile, Tabitha A. Harrison, Richard B. Hayes, Michael Hoffmeister, John L. Hopper, Thomas J. Hudson, Jihyoun Jeon, Mark A. Jenkins, Jonathan Kocarnik, Sébastien Küry, Loı̈c Le Marchand, Yi Lin, Noralane M. Lindor, Reiko Nishihara, Shuji Ogino, John D. Potter, Anja Rudolph, Robert E. Schoen, Petra Schrotz‐King, Daniela Seminara, Martha L. Slattery, Stephen N. Thibodeau, Mark Thornquist, Réka Tóth, Robert B. Wallace, Emily White, Shuo Jiao, Mathieu Lemire, Li Hsu, Ulrike Peters
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0255093

Rethinking remdesivir for COVID-19: A Bayesian reanalysis of trial findings
Cited by: 6
Author(s): Joyce M. Hoek, Sarahanne Field, Ymkje Anna de Vries, Maximilian Linde, Merle Marie Pittelkow, Jasmine Muradchanian, Don van Ravenzwaaij
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0202281

A survey of molecular diversity and population genetic structure in North American clearwing moths (Lepidoptera: Sesiidae) using cytochrome c oxidase I
Cited by: 6
Author(s): Linda A. Lait, Paul D. N. Hebert
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0021031

Improved Phylogenetic Analyses Corroborate a Plausible Position of Martialis heureka in the Ant Tree of Life
Cited by: 25
Author(s): Patrick Kück, Francisco Hita Garcia, Bernhard Misof, Karen Meusemann
Software Mentions: 2
Published: over 13 years ago

10.1371/journal.pone.0206732

Past vicariance promoting deep genetic divergence in an endemic frog species of the Espinhaço Range in Brazil: The historical biogeography of Bokermannohyla saxicola (Hylidae)
Cited by: 13
Author(s): Augusto César Nascimento, Anderson V. Chaves, Felipe Sá Fortes Leite, Paula Cabral Eterovick, Fabrício R. Santos
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0189056

A backwards glance at words: Using reversed-interior masked primes to test models of visual word identification
Cited by: 6
Author(s): Colin J. Davis, Stephen J. Lupker
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0083570

Investigating the Prehistory of Tungusic Peoples of Siberia and the Amur-Ussuri Region with Complete mtDNA Genome Sequences and Y-chromosomal Markers
Cited by: 36
Author(s): Ana T. Duggan, Mark Whitten, Victor Wiebe, Michael H. Crawford, Anne Butthof, В. А. Спицын, Sergey Makarov, Innokentiy Novgorodov, Vladimir L. Osakovsky, Brigitte Pakendorf
Software Mentions: 2
Published: almost 11 years ago

10.1371/journal.pone.0143795

Evolution of the Northern Rockweed, Fucus distichus, in a Regime of Glacial Cycling: Implications for Benthic Algal Phylogenetics
Cited by: 12
Author(s): Haywood Dail Laughinghouse, Kirsten M. Müller, Walter H. Adey, Yannick Lara, Reginald H.F. Young, Gabriel Johnson
Software Mentions: 2
Published: almost 9 years ago

10.1007/s10815-019-01451-8

Bayesian model for accurate MARSALA (mutated allele revealed by sequencing with aneuploidy and linkage analyses)
Cited by: 4
Author(s): Luoxing Xiong, Lei Huang, Feng Tian, Sijia Lü, X. Sunney Xie
Software Mentions: 2
Published: over 5 years ago

10.1038/srep40536

Evidence of neofunctionalization after the duplication of the highly conserved Polycomb group gene Caf1-55 in the obscura group of Drosophila
Cited by: 4
Author(s): Juan M. Calvo-Martín, Montserrat Papaceit, Carmen Segarra
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-017-00484-2

Nod2 and Nod2-regulated microbiota protect BALB/c mice from diet-induced obesity and metabolic dysfunction
Cited by: 37
Author(s): Iván Rodríguez-Nunez, Tiffany Caluag, Kori Kirby, Charles N. Rudick, Roman Dziarski, Dipika Gupta
Software Mentions: 2
Published: over 7 years ago

10.1186/1471-2148-11-117

Diversification across an altitudinal gradient in the Tiny Greenbul (Phyllastrephus debilis) from the Eastern Arc Mountains of Africa
Cited by: 36
Author(s): Jérôme Fuchs, Jon Fjeldså, Rauri C. K. Bowie
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0146162

Pglyrp-Regulated Gut Microflora Prevotella falsenii, Parabacteroides distasonis and Bacteroides eggerthii Enhance and Alistipes finegoldii Attenuates Colitis in Mice
Cited by: 207
Author(s): Roman Dziarski, Shin Yong Park, Des Raj Kashyap, Scot E. Dowd, Dipika Gupta
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0193246

The effects of socioecological factors on variation of communicable diseases: A multiple-disease study at the national scale of Vietnam
Cited by: 16
Author(s): Dung Phung, Huong Nguyen, Huong Lien Thi Nguyen, Anh Mai Luong, Cuong Manh, Quang Tran, Cordia Chu
Software Mentions: 1
Published: over 6 years ago

10.1186/s12874-019-0861-2

Modeling perinatal mortality in twins via generalized additive mixed models: a comparison of estimation approaches
Cited by: 7
Author(s): Muhammad Abu Shadeque Mullah, James A. Hanley, Andrea Benedetti
Software Mentions: 1
Published: about 5 years ago

10.3389/fpsyg.2020.570221

The Role of Perceived Energy and Self-Beliefs for Physical Activity and Sports Activity of Patients With Multiple Sclerosis and Chronic Stroke
Cited by: 3
Author(s): Julia Schüler, Wanja Wolff, Julian Pfeifer, Romina Rihm, Jessica Reichel, Gerhard Rothacher, Christian Dettmers
Software Mentions: 1
Published: almost 4 years ago

10.1093/gbe/evaa105

Performance of A Priori and A Posteriori Calibration Strategies in Divergence Time Estimation
Cited by: 9
Author(s): Alan Beavan, Philip C. J. Donoghue, Mark A. Beaumont, Davide Pisani
Software Mentions: 1
Published: over 4 years ago

10.1673/031.012.11501

Biogeographical Origin and Speciation of theAnthocoris nemorumGroup
Cited by: 4
Author(s): Min Li, Qiang Liu, Yongjian Ke, Ying Tian, Gengping Zhu, Qiang Xie, Wenjun Bu
Software Mentions: 1
Published: about 12 years ago

10.1016/j.jcis.2021.03.078

Large scale model lipid membrane movement induced by a cation switch
Cited by: 7
Author(s): Laura John, Gail Preston, Mark S. P. Sansom, Luke A. Clifton
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0101727

The Past and Present of an Estuarine-Resident Fish, the “Four-Eyed Fish” Anableps anableps (Cyprinodontiformes, Anablepidae), Revealed by mtDNA Sequences
Cited by: 8
Author(s): Luciana Watanabe, Marcelo Vallinoto, E. Nils, Janice Muriel‐Cunha, Ulrich Saint-Paul, Horácio Schneider, Iracilda Sampaio
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2148-13-141

A phylogenetic analysis of the grape genus (Vitis L.) reveals broad reticulation and concurrent diversification during neogene and quaternary climate change
Cited by: 110
Author(s): Yizhen Wan, Heidi Schwaninger, Angela M. Baldo, Joanne A. Labate, Gan-Yuan Zhong, Charles J. Simon
Software Mentions: 1
Published: over 11 years ago

10.1155/2019/6417471

Altered Gut Microbiota Diversity and Composition in Chronic Urticaria
Cited by: 28
Author(s): Tao Lu, Yanxia Chen, Yangmin Guo, Jiayu Sun, Weitao Shen, Mengsi Yuan, Shuping Zhang, Ping He, Xiaoyang Jiao
Software Mentions: 1
Published: about 5 years ago

10.1155/2014/296349

Integration Strategy Is a Key Step in Network-Based Analysis and Dramatically Affects Network Topological Properties and Inferring Outcomes
Cited by: 4
Author(s): Nana Jin, Deng Chyang Wu, Yuanfeng Gong, Xiaoman Bi, Hong Jiang, Kongning Li, Qianghu Wang
Software Mentions: 1
Published: almost 11 years ago

10.1080/23802359.2021.1951138

The complete mitochondrial genome of Monolepta hieroglyphica (Motschulsky) (Coleoptera: Chrysomelidae)
Cited by: 0
Author(s): Qi He, Xianmei Song, Hongwen Ma, Yin Yi
Software Mentions: 1
Published: over 3 years ago

10.1080/23802359.2019.1681922

The complete mitochondrial genome of Cyamophila willieti (Wu) (Hemiptera: Psyllidae)
Cited by: 3
Author(s): Xianmei Song, Yunchuan He, Xinpu Wang, Xin Gu
Software Mentions: 1
Published: over 5 years ago

10.1080/23802359.2021.1926363

The complete mitochondrial genome of Monolepta hieroglyphica (Motschulsky) (Coleoptera: Chrysomelidae)
Cited by: 0
Author(s): Qi He, Xianmei Song, Hongwen Ma, Yin Yi
Software Mentions: 1
Published: over 3 years ago

10.1002/mnfr.201901135

Monomeric Flavanols Are More Efficient Substrates for Gut Microbiota Conversion to Hydroxyphenyl‐γ‐Valerolactone Metabolites Than Oligomeric Procyanidins: A Randomized, Placebo‐Controlled Human Intervention Trial
Cited by: 19
Author(s): Wendy J Hollands, Mark Philo, Natalia Pérez-Moral, Paul W. Needs, George M. Savva, Paul A. Kroon
Software Mentions: 1
Published: over 4 years ago

10.1186/1756-0500-7-816

Zoonotic parapoxviruses detected in symptomatic cattle in Bangladesh
Cited by: 18
Author(s): Edith Lederman, Salah Ud‐Din Khan, Stephen P. Luby, Hui Zhao, Zachary Braden, Jinxin Gao, Kevin L. Karem, Inger K. Damon, Mary G. Reynolds, Yu Liu
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pcbi.1000044

A Semi-Supervised Method for Predicting Transcription Factor–Gene Interactions in Escherichia coli
Cited by: 99
Author(s): Jason Ernst, Qasim Khalil Beg, Krin A. Kay, Gábor Balázsi, Zoltán N. Oltvai, Ziv Bar‐Joseph
Software Mentions: 1
Published: over 16 years ago

10.3390/ani3010142

An Investigation of a Cluster of Parapoxvirus Cases in Missouri, Feb–May 2006: Epidemiologic, Clinical and Molecular Aspects
Cited by: 7
Author(s): Edith Lederman, Min Tao, Mary G. Reynolds, Yu Liu, Hui Zhao, Scott K. Smith, Lisa Sitler, Dana L. Haberling, Whitni Davidson, Christina L. Hutson, Ginny L. Emerson, David P. Schnurr, Russell L. Regnery, Bao–Ping Zhu, Howard Pue, Inger K. Damon
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pntd.0004846

Post-Marketing Surveillance of Human Rabies Diploid Cell Vaccine (Imovax) in the Vaccine Adverse Event Reporting System (VAERS) in the United States, 1990‒2015
Cited by: 22
Author(s): Pedro L. Moro, Emily Jane Woo, Wendy M. Paul, Paige Lewis, Brett W. Petersen, Maria Cano
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0208997

Genetic structure and diversity in Brazilian populations of Anastrepha obliqua (Diptera: Tephritidae)
Cited by: 8
Author(s): Joseane Fernanda Passos, Danilo Baia do Nascimento, Rodolpho S. T. Menezes, Ricardo Adaime, Elton Lúcio Araújo, Kauana Santos de Lima, Roberto A. Zucchi, Beatriz Ronchi‐Teles, Ruth R. Do Nascimento, Raul Ruiz Arce, Norman B. Barr, Bruce A. McPheron, Janisete Gomes Silva
Software Mentions: 1
Published: almost 6 years ago

10.3389/fpls.2021.666820

Genomic Predictions With Nonadditive Effects Improved Estimates of Additive Effects and Predictions of Total Genetic Values in Pinus sylvestris
Cited by: 8
Author(s): Ainhoa Calleja-Rodríguez, Zhiqiang Chen, Mari Suontama, Peng Jin, Harry X. Wu
Software Mentions: 1
Published: over 3 years ago

Projects: pypi: Bayesian

Papers Mentioning Bayesian 44