Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: Analyze

https://packages.ecosyste.ms/registries/pypi.org/packages/Analyze

Analyze is a python library that provides comprehensive statistical analysis of a dataframe in 5 lines of code. It creates significant insight for data scientists, analysts and machine learning engineers, enabling quick understanding of a dataset.
2 versions
Latest release: over 3 years ago
91 downloads last month

Papers Mentioning Analyze 615

10.3389/fnins.2021.617221
Automated Quantitative Analysis of ex vivo Blood-Brain Barrier Permeability Using Intellesis Machine-Learning
Cited by: 6
Author(s): Michael Nesbit, John Mamo, Maimuna Majimbi, Virginie Lam, Ryusuke Takechi
Software Mentions: 1
Published: over 3 years ago
10.3389/fped.2017.00073
Brain Lesions among Orally Fed and Gastrostomy-Fed Dysphagic Preterm Infants: Can Routine Qualitative or Volumetric Quantitative Magnetic Resonance Imaging Predict Feeding Outcomes?
Cited by: 4
Author(s): Nasser H. Kashou, Irfaan A. Dar, Mohamed A. El‐Mahdy, Charles P. Pluto, Mark A. Smith, Ish K. Gulati, Warren Lo, Sudarshan R. Jadcherla
Software Mentions: 1
Published: over 7 years ago
10.3389/fphar.2021.674366
The Fungal Metabolite (+)-Terrein Abrogates Ovariectomy-Induced Bone Loss and Receptor Activator of Nuclear Factor-κB Ligand–Induced Osteoclastogenesis by Suppressing Protein Kinase-C α/βII Phosphorylation
Cited by: 1
Author(s): Kyosuke Sakaida, Kazuhiro Omori, Masaaki Nakayama, Hiroki Mandai, Setsuko Nakagawa, Hidefumi Sako, C Kamei, Satoshi Yamamoto, Hiroya Kobayashi, Satoki Ishii, M. Ono, Soichiro Ibaragi, Keisuke Yamashiro, Tadashi Yamamoto, Seiji Suga, Shogo Takashiba
Software Mentions: 1
Published: over 3 years ago
10.3389/fphar.2019.01181
Plumbagin Prevents Secretory Diarrhea by Inhibiting CaCC and CFTR Channel Activities
Cited by: 17
Author(s): Yu B, Xiaojuan Zhu, Xinyu Yang, Lingling Jin, Jia Xu, Tonghui Ma, Hong Yang
Software Mentions: 1
Published: about 5 years ago
10.3389/fphar.2013.00149
Cardioprotection by systemic dosing of thymosin beta four following ischemic myocardial injury
Cited by: 19
Author(s): Weike Bao, Victoria L. T. Ballard, Saul Needle, Bao Hoang, Stephen C. Lenhard, James Tunstead, Beat M. Jucker, Robert N. Willette, G. Teg Pipes
Software Mentions: 1
Published: almost 12 years ago
10.3389/fphar.2021.588587
Galectin-3 Mediated Inflammatory Response Contributes to Neurological Recovery by QiShenYiQi in Subacute Stroke Model
Cited by: 4
Author(s): Yule Wang, Shuang He, Xinyan Li, Zhixiong Li, Lin Zhu, Guangxu Xiao, Xin Du, Hong Du, Wen Zhang, Yiqian Zhang, John Orgah, Yi Feng, Boli Zhang, Yan Zhu
Software Mentions: 1
Published: over 3 years ago
10.3389/fphys.2019.01102
TLR2-Deficiency Promotes Prenatal LPS Exposure-Induced Offspring Hyperlipidemia
Cited by: 3
Author(s): Dayan Cao, Wenjia Wang, Shuhui Li, Wenjing Lai, Xiaoyong Huang, Jiahui Zhou, Xin Chen, Xiaohui Li
Software Mentions: 1
Published: over 5 years ago
10.3389/fphys.2018.01227
Axial Tubule Junctions Activate Atrial Ca2+ Release Across Species
Cited by: 30
Author(s): Sören Brandenburg, Jan Pawlowitz, Funsho E Fakuade, Daniel Kownatzki-Danger, Tobias Kohl, Gyuzel Yu. Mitronova, Marina Scardigli, Jakob Neef, Constanze Schmidt, Felix Wiedmann, Francesco S. Pavone, Leonardo Sacconi, Ingo Kutschka, Samuel Sossalla, Tobias Moser, Niels Voigt, Stephan E. Lehnart
Software Mentions: 1
Published: about 6 years ago
10.3389/fphys.2020.530218
No Evidence That Hyperpnea-Based Respiratory Muscle Training Affects Indexes of Cardiovascular Health in Young Healthy Adults
Cited by: 4
Author(s): Fernando G. Beltrami, David Mzee, Christina M. Spengler
Software Mentions: 1
Published: almost 4 years ago
10.3389/fphys.2020.571372
The Dunkin Hartley Guinea Pig Is a Model of Primary Osteoarthritis That Also Exhibits Early Onset Myofiber Remodeling That Resembles Human Musculoskeletal Aging
Cited by: 15
Author(s): Robert V. Musci, Maureen Walsh, Adam R. Konopka, Christopher A. Wolff, Frederick F. Peelor, Raoul F. Reiser, Kelly S. Santangelo, Karyn L. Hamilton
Software Mentions: 1
Published: about 4 years ago
10.3389/fphys.2018.00742
Application of Patient-Specific Computational Fluid Dynamics in Coronary and Intra-Cardiac Flow Simulations: Challenges and Opportunities
Cited by: 68
Author(s): Liang Zhong, Junmei Zhang, Boyang Su, Ru San Tan, John C. Allen, Ghassan S. Kassab
Software Mentions: 1
Published: over 6 years ago
10.3389/fphys.2020.01046
Intrarenal Renin Angiotensin System Imbalance During Postnatal Life Is Associated With Increased Microvascular Density in the Mature Kidney
Cited by: 2
Author(s): Carolina Dalmasso, Alejandro Chade, Mariela Méndez, Jorge F. Giani, Gregory Bix, Kuey Chu Chen, Analia S. Loria
Software Mentions: 1
Published: about 4 years ago
10.3389/fphys.2016.00673
Retinoic Acid Excess Impairs Amelogenesis Inducing Enamel Defects
Cited by: 16
Author(s): Supawich Morkmued, Virginie Laugel-Haushalter, Éric Mathieu, Brigitte Schuhbaur, Joseph Hemmerlé, Pascal Dollé, Agnès Bloch‐Zupan, Karen Niederreither
Software Mentions: 1
Published: almost 8 years ago
10.3389/fphys.2014.00198
Greater glucose uptake heterogeneity in knee muscles of old compared to young men during isometric contractions detected by [18F]-FDG PET/CT
Cited by: 9
Author(s): Thorsten Rudroff, John H. Kindred, John-Michael Benson, Brian Tracy, Kari K. Kalliokoski
Software Mentions: 1
Published: over 10 years ago
10.3389/fpls.2020.00031
Excess Pyrophosphate Restrains Pavement Cell Morphogenesis and Alters Organ Flatness in Arabidopsis thaliana
Cited by: 10
Author(s): Shizuka Gunji, Y. Oda, Hisako Takigawa-Imamura, Hirokazu Tsukaya, Ali Ferjani
Software Mentions: 1
Published: over 4 years ago
10.3389/fpsyt.2014.00039
Do Manual and Voxel-Based Morphometry Measure the Same? A Proof of Concept Study
Cited by: 16
Author(s): Niels K. Focke, Sarah Trost, Walter Paulus, Peter Falkai, Oliver Gruber
Software Mentions: 1
Published: over 10 years ago
10.3389/frobt.2020.00024
A Perspective on Innovating the Chemistry Lab Bench
Cited by: 11
Author(s): Alexander G. Godfrey, Samuel G. Michael, G. Sitta Sittampalam, Gergely Zahoránszky-Kőhalmi
Software Mentions: 1
Published: over 4 years ago
10.3389/fnsys.2014.00051
Resting state functional connectivity in early blind humans
Cited by: 78
Author(s): Harold Burton, Abraham Z. Snyder, Marcus E. Raichle
Software Mentions: 1
Published: over 10 years ago
10.3389/fnsys.2013.00125
Corpus callosal microstructure influences intermanual transfer in chimpanzees
Cited by: 6
Author(s): Kimberley A. Phillips, Jennifer Schaeffer, William D. Hopkins
Software Mentions: 1
Published: almost 12 years ago
10.3389/fnsys.2020.00021
Multiple Network Disconnection in Anosognosia for Hemiplegia
Cited by: 17
Author(s): Elena Monai, Francesca Bernocchi, Marta Bisio, Antonio Luigi Bisogno, Alessandro Salvalaggio, Maurizio Corbetta
Software Mentions: 1
Published: over 4 years ago
10.3389/fnsys.2021.675272
Patient-Specific Network Connectivity Combined With a Next Generation Neural Mass Model to Test Clinical Hypothesis of Seizure Propagation
Cited by: 10
Author(s): Moritz Gerster, Halgurd Taher, Antonín Škoch, Jaroslav Hlinka, Maxime Guye, Fabricē Bartolomei, Viktor K. Jirsa, Anna Zakharova, Simona Olmi
Software Mentions: 1
Published: about 3 years ago
10.3389/fvets.2020.587524
3D Printed Biomimetic Rabbit Airway Simulation Model for Nasotracheal Intubation Training
Cited by: 10
Author(s): Gunpreet Oberoi, Matthias Eberspächer-Schweda, Sepideh Hatamikia, Markus Königshofer, Doris Baumgartner, Anne-Margarethe Kramer, P. Schaffarich, Hermann Agis, Francesco Moscato, Ewald Unger
Software Mentions: 1
Published: almost 4 years ago
10.3389/fvets.2020.588592
Alfaxalone and Dexmedetomidine as an Alternative to Gas Anesthesia for Micro-CT Lung Imaging in a Bleomycin-Induced Pulmonary Fibrosis Murine Model
Cited by: 11
Author(s): Erica Ferrini, Laura Mecozzi, Luisa Corsi, Luisa Ragionieri, Gaetano Donofrío, Franco Fabio Stellari
Software Mentions: 1
Published: about 4 years ago
10.1016/j.heliyon.2021.e06530
Conditioned medium from mesenchymal stem cells improves condylar resorption induced by mandibular distraction osteogenesis in a rat model
Cited by: 2
Author(s): Wataru Katagiri, Satoshi Endo, Ryoko Takeuchi, Daisuke Suda, Natsukaze Saito, Tadaharu Kobayashi
Software Mentions: 1
Published: over 3 years ago
10.1002/hbm.23857
Cognitive abilities, brain white matter hyperintensity volume, and structural network connectivity in older age
Cited by: 37
Author(s): Stewart Wiseman, Tom Booth, Stuart J. Ritchie, Simon R. Cox, Susana Muñoz Maniega, Maria del C. Valdés-Hernández, David Alexander Dickie, Natalie A. Royle, John M. Starr, Ian J. Deary, Joanna M. Wardlaw, Mark E. Bastin
Software Mentions: 1
Published: about 7 years ago
10.1002/hbm.24918
Accuracy of automated amygdala MRI segmentation approaches in Huntington's disease in the IMAGE‐HD cohort
Cited by: 8
Author(s): Bonnie Alexander, Nellie Georgiou‐Karistianis, Richard Beare, Lotta M. Ahveninen, Valentina Lorenzetti, Julie C. Stout, Yifat Glikmann‐Johnston
Software Mentions: 1
Published: almost 5 years ago
10.1002/iid3.154
Vitamin D3supplementation of a high fat high sugar diet ameliorates prediabetic phenotype in female LDLR−/−and LDLR+/+mice
Cited by: 3
Author(s): Ramiar Kamal Kheder, James Hobkirk, Zeayd Fadhil Saeed, Justyna Janus, Sean Carroll, Michael Browning, Cordula M. Stover
Software Mentions: 1
Published: over 7 years ago
10.4103/0971-3026.38503
Free DICOM browsers
Cited by: 5
Author(s): Dandu Ravi Varma
Software Mentions: 1
Published: almost 17 years ago
10.1016/j.intell.2015.05.001
Beyond a bigger brain: Multivariable structural brain imaging and intelligence
Cited by: 93
Author(s): Stuart J. Ritchie, Tom Booth, María del C. Valdés Hernández, Janie Corley, Susana Muñoz Maniega, Alan J. Gow, Natalie A. Royle, Alison Pattie, Sherif Karama, John M. Starr, Mark E. Bastin, Joanna M. Wardlaw, Ian J. Deary
Software Mentions: 1
Published: over 9 years ago
10.1002/jbm4.10189
Regulation of Osteosclerosis by Inoculated Cd133<sup>+</sup>PC3 Cells in Bone‐marrow Microenvironmental Niches
Cited by: 6
Author(s): Donghwi Kim, Youngjong Ko, Mineon Park, Bora Kim, HongMoon Sohn, Wonbong Lim
Software Mentions: 1
Published: over 5 years ago
10.1002/jbm4.10338
Specific Commensal Bacterium Critically Regulates Gut Microbiota Osteoimmunomodulatory Actions During Normal Postpubertal Skeletal Growth and Maturation
Cited by: 20
Author(s): Jessica D. Hathaway‐Schrader, Nicole Poulides, Matthew D. Carson, Joy E Kirkpatrick, Amy J. Warner, Brooks A Swanson, Eliza V Taylor, Michael E. Chew, Sakamuri V. Reddy, Bei Liu, Caroline Westwater, Chad M. Novince
Software Mentions: 1
Published: almost 5 years ago
10.1172/jci.insight.139983
Allosteric folding correction of F508del and rare CFTR mutants by elexacaftor-tezacaftor-ivacaftor (Trikafta) combination
Cited by: 145
Author(s): Guido Veit, Ariel Roldán, Mark A. Hancock, Dillon F. Da Fonte, Haijin Xu, Maytham Hussein, Saul Frenkiel, Elias Matouk, Tony Velkov, Gergely L. Lukacs
Software Mentions: 1
Published: about 4 years ago
10.1172/jci.insight.137646
TRPV4 antagonists ameliorate ventriculomegaly in a rat model of hydrocephalus
Cited by: 27
Author(s): Alexandra Hochstetler, Hillary M. Smith, Daniel Preston, Makenna M. Reed, Paul R. Territo, Joon W. Shim, Daniel H. Fulkerson, Bonnie L. Blazer‐Yost
Software Mentions: 1
Published: about 4 years ago
10.4061/2011/606871
Anatomical Correlates of Age-Related Working Memory Declines
Cited by: 37
Author(s): Evan T. Schulze, Elizabeth Geary, Teresa Susmaras, J. Thomas Paliga, Pauline M. Maki, Deborah M. Little
Software Mentions: 1
Published: almost 14 years ago
10.1161/JAHA.113.000202
Effects of Cell Grafting on Coronary Remodeling After Myocardial Infarction
Cited by: 14
Author(s): Jill J. Weyers, Stephen M. Schwartz, Elina Minami, Dara D. Carlson, Sarah K. Dupras, Kevin Weitz, Michael Simons, Timothy C. Cox, Charles E. Murry, William M. Mahoney
Software Mentions: 1
Published: over 11 years ago
10.1120/jacmp.v11i1.3128
A simple method to test geometrical reliability of digital reconstructed radiograph (DRR)
Cited by: 5
Author(s): S. Pallotta, M. Bucciolini
Software Mentions: 1
Published: almost 15 years ago
10.1120/jacmp.v8i1.2351
Post-implant computed tomography-magnetic resonance prostate image registration using feature line parallelization and normalized mutual information
Cited by: 17
Author(s): S Vidakovic, Hans-Soenke Jans, Abe Alexander, Ron S. Sloboda
Software Mentions: 1
Published: over 17 years ago
10.1117/1.JBO.22.8.086009
Label-free reflectance hyperspectral imaging for tumor margin assessment: a pilot study on surgical specimens of cancer patients
Cited by: 87
Author(s): Baowei Fei, Guolan Lu, Xu Wang, Hongzheng Zhang, James V. Little, Mihir R. Patel, Christopher C. Griffith, Mark W. El-Diery, Amy Y. Chen
Software Mentions: 1
Published: about 7 years ago
10.1186/1532-429X-10-13
Correction of misaligned slices in multi-slice cardiovascular magnetic resonance using slice-to-volume registration
Cited by: 27
Author(s): Adrian Chandler, Richard Pinder, Thomas Netsch, Julia A. Schnabel, David J. Hawkes, Derek L. G. Hill, Reza Razavi
Software Mentions: 1
Published: over 16 years ago
10.1083/jcb.201610113
Persistent mTORC1 signaling in cell senescence results from defects in amino acid and growth factor sensing
Cited by: 98
Author(s): Bernadette Carroll, Glyn Nelson, Yoana Rabanal-Ruíz, Olena Kucheryavenko, Natasha A. Dunhill-Turner, Charlotte C. Chesterman, Qabil Zahari, Tong-Tong Zhang, Sarah E Conduit, Christina A. Mitchell, Oliver D.K. Maddocks, Penny E. Lovat, Thomas von Zglinicki, Viktor I. Korolchuk
Software Mentions: 1
Published: over 7 years ago
10.1177/0271678X17710375
Vasoreactivity in CADASIL: Comparison to structural MRI and neuropsychology
Cited by: 23
Author(s): Fiona Moreton, Breda Cullen, Christian Delles, Celestine Santosh, Rosario Lopez Gonzalez, Krishna Dani, Keith W. Muir
Software Mentions: 1
Published: over 7 years ago
10.1038/jcbfm.2014.123
Use of Diffusion Tensor Imaging to Assess the Impact of Normobaric Hyperoxia within At-Risk Pericontusional Tissue after Traumatic Brain Injury
Cited by: 21
Author(s): Tonny Veenith, Carter El, Julia Grossac, Virginia Newcombe, Joanne Outtrim, Sridhar Nallapareddy, Victoria Lupson, MM Correia, Marius Mada, Guy B. Williams, David Menon, Jonathan P. Coles
Software Mentions: 1
Published: over 10 years ago
10.1177/0271678X20915801
The role of spreading depolarizations and electrographic seizures in early injury progression of the rat photothrombosis stroke model
Cited by: 16
Author(s): Karl Schoknecht, Majed Kikhia, Coline L. Lemâle, Agustin Liotta, Svetlana Lublinsky, Susanne Mueller, Philipp Boehm‐Sturm, Alon Friedman, Jens P. Dreier
Software Mentions: 1
Published: over 4 years ago
10.1177/0271678X16654921
Systematic and detailed analysis of behavioural tests in the rat middle cerebral artery occlusion model of stroke: Tests for long-term assessment
Cited by: 47
Author(s): Rebecca C. Trueman, Claris Diaz, Tracy D. Farr, David J. Harrison, Anna Fuller, Paweł Tokarczuk, Andrew J. Stewart, Stephen J. Paisey, Stephen B. Dunnett
Software Mentions: 1
Published: over 8 years ago
10.3390/jcm8111813
High Betaine, a Trimethylamine N-Oxide Related Metabolite, Is Prospectively Associated with Low Future Risk of Type 2 Diabetes Mellitus in the PREVEND Study
Cited by: 26
Author(s): Erwin Garcia, Maryse C J Osté, Dennis W. Bennett, Elias J. Jeyarajah, Irina Shalaurova, Eke G. Gruppen, Stanley L. Hazen, James D. Otvos, Stephan J. L. Bakker, Robin Dullaart, Margery A. Connelly
Software Mentions: 1
Published: about 5 years ago
10.3390/jcm10112234
Perihematomal Edema and Clinical Outcome in Intracerebral Hemorrhage Related to Different Oral Anticoagulants
Cited by: 5
Author(s): Jawed Nawabi, Sarah Elsayed, Andrea Morotti, Anna Speth, Melanie Liu, Helge Kniep, Rosalie McDonough, Gabriel Broocks, Tobias D Faizy, Elif Can, Peter Sporns, Jens Fiehler, Bernd Hamm, Tobias Penzkofer, Georg Böhner, Frieder Schlunk, Uta Hanning
Software Mentions: 1
Published: over 3 years ago
10.1097/RCT.0000000000000314
Volumetric and Correlational Implications of Brain Parcellation Method Selection
Cited by: 1
Author(s): Simon R. Cox, Tahlia I. McKenzie, Benjamin S. Aribisala, Natalie A. Royle, Sarah E. MacPherson, Alasdair M.J. MacLullich, Mark E. Bastin, Joanna M. Wardlaw, Ian J. Deary, Karen Ferguson
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.ppat.1000895
Host-Detrimental Role of Esx-1-Mediated Inflammasome Activation in Mycobacterial Infection
Cited by: 127
Author(s): Fredric Carlsson, Janice Kim, Calin Dan Dumitru, Kai Barck, Richard A.D. Carano, Miao Sun, Lauri Diehl, Eric J. Brown
Software Mentions: 1
Published: over 14 years ago
10.1371/journal.ppat.1006785
Increased autophagic sequestration in adaptor protein-3 deficient dendritic cells limits inflammasome activity and impairs antibacterial immunity
Cited by: 10
Author(s): Adriana R. Mantegazza, Meghan A. Wynosky-Dolfi, Cierra N. Casson, Ariel Lefkovith, Sunny Shin, Igor E. Brodsky, Michael S. Marks
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.ppat.1009282
Multimerization- and glycosylation-dependent receptor binding of SARS-CoV-2 spike proteins
Cited by: 37
Author(s): Kim M. Bouwman, Ilhan Tomris, Hannah L. Turner, Roosmarijn van der Woude, Tatiana M. Shamorkina, Gerlof P. Bosman, Barry Rockx, Sander Herfst, Joost Snijder, Bart L. Haagmans, Andrew B. Ward, G. J. P. H. Boons, Robert P. de Vries
Software Mentions: 1
Published: almost 4 years ago
10.3390/polym12040894
Process Induced Skin-Core Morphology in Injection Molded Polyamide 66
Cited by: 12
Author(s): Yvonne Spoerer, René Androsch, Dieter Jehnichen, Ines Kuehnert
Software Mentions: 1
Published: over 4 years ago
10.3390/polym12112561
Multiscale Experimental Evaluation of Agarose-Based Semi-Interpenetrating Polymer Network Hydrogels as Materials with Tunable Rheological and Transport Performance
Cited by: 9
Author(s): Monika Trudičová, Jiří Smilek, Michal Kalina, Marcela Smilková, Kateřina Adámková, Kamila Hrubanová, Vladislav Krzyžánek, Petr Sedláček
Software Mentions: 1
Published: about 4 years ago
10.1186/s40510-021-00366-4
The role of inhibition of osteocyte apoptosis in mediating orthodontic tooth movement and periodontal remodeling: a pilot study
Cited by: 2
Author(s): Michele Kaplan, Žana Kalajzić, Thomas Choi, Imad Maleeh, Christopher L. Ricupero, Michelle N. Skelton, Madeleine L. Daily, Jing Chen, Sunil Wadhwa
Software Mentions: 1
Published: over 3 years ago
10.1186/1748-717X-6-31
Validation of an elastic registration technique to estimate anatomical lung modification in Non-Small-Cell Lung Cancer Tomotherapy
Cited by: 6
Author(s): Elena Faggiano, Giovanni Mauro Cattaneo, Cristina Ciavarro, I. Dell’Oca, Diego Persano, R. Calandrino, Giovanna Rizzo
Software Mentions: 1
Published: over 13 years ago
10.1186/s12931-020-01370-8
Automatization and improvement of μCT analysis for murine lung disease models using a deep learning approach
Cited by: 10
Author(s): Gerald Birk, Marc Kästle, Cornelia Tilp, Birgit Stierstorfer, Stephan Klee
Software Mentions: 1
Published: over 4 years ago
10.1186/s12931-020-01500-2
Nrf2 protects against seawater drowning-induced acute lung injury via inhibiting ferroptosis
Cited by: 77
Author(s): Yu-bao Qiu, Bin-bin Wan, Gang Liu, Yaxian Wu, Dan Chen, Mengji Lu, Junliang Chen, Renqiang Yu, Daozhen Chen, Qingfeng Pang
Software Mentions: 1
Published: about 4 years ago
10.1590/1518-8345.4878.3431
Content analysis of the Global Alliance for Nursing and Midwifery discussion forum: an online community of practice
Cited by: 1
Author(s): Hillary Chu, Ashley Gresh, Valentina Bolanos, Nancy Reynolds
Software Mentions: 1
Published: almost 4 years ago
10.1126/sciadv.abh0363
Intravital imaging technology guides FAK-mediated priming in pancreatic cancer precision medicine according to Merlin status
Cited by: 21
Author(s): Kendelle J. Murphy, Daniel A Reed, Claire Vennin, James R. W. Conway, Max Nobis, Julia Yin, Cecilia R. Chambers, Brooke A. Pereira, Victoria Lee, Elysse C. Filipe, Michael Trpceski, Shona Ritchie, Morghan C. Lucas, Sean Warren, Joanna N. Skhinas, Astrid Magenau, Xanthe L. Metcalf, Janett Stoehr, Gretel Major, Ashleigh Parkin, Romain Bidanel, Ruth J. Lyons, Anaiis Zaratzian, Michael Tayao, Andrew Da Silva, Lea Abdulkhalek, Australian Pancreatic Genome Initiative, Anthony J. Gill, Amber Johns, Andrew V. Biankin, Jaswinder S. Samra, Sean M. Grimmond, Angela Chou, Jacky G. Goetz, Michael S. Samuel, J. Guy Lyons, Andrew Burgess, C. Elizabeth Caldon, Lisa G. Horvath, Roger J. Daly, Nikolaj Gadegaard, Yingxiao Wang, Owen J. Sansom, Jennifer P. Morton, Thomas R. Cox, Marina Pajic, David Herrmann
Software Mentions: 1
Published: about 3 years ago
10.1038/sdata.2018.294
A preclinical micro-computed tomography database including 3D whole body organ segmentations
Cited by: 14
Author(s): Stefanie Rosenhain, Zuzanna Magnuska, Grace Gyamfuah Yamoah, Wa’el Al Rawashdeh, Fabian Kießling, Felix Gremse
Software Mentions: 1
Published: almost 6 years ago
10.1038/sdata.2019.1
Manually-parcellated gyral data accounting for all known anatomical variability
Cited by: 2
Author(s): Shadia Mikhael, Grant Mair, Maria del C. Valdés-Hernández, Corné Hoogendoorn, Joanna M. Wardlaw, Mark E. Bastin, Cyril Pernet
Software Mentions: 1
Published: almost 6 years ago
10.1038/srep11382
FGF21 does not require interscapular brown adipose tissue and improves liver metabolic profile in animal models of obesity and insulin-resistance
Cited by: 44
Author(s): Barbara Bernardo, Min Lü, Gautam Bandyopadhyay, Ping Ping Li, Yang Zhou, Jie Huang, Nancy Levin, Eva Tomás, Roberto A. Calle, Derek M. Erion, Timothy P. Rolph, Martin Brenner, Saswata Talukdar
Software Mentions: 1
Published: over 9 years ago
10.1038/srep19928
Emerging role of lipid droplets in Aedes aegypti immune response against bacteria and Dengue virus
Cited by: 60
Author(s): Ana Beatriz F. Barletta, Liliane R. Alves, Maria Clara L. Nascimento Silva, Shuzhen Sim, George Dimopoulos, Sally Liechocki, Clarissa M. Maya‐Monteiro, Marcos Henrique Ferreira Sorgine
Software Mentions: 1
Published: almost 9 years ago
10.1038/srep22776
Adaptive bill morphology for enhanced tool manipulation in New Caledonian crows
Cited by: 35
Author(s): Hiroshi Matsui, Gavin R. Hunt, Katja Oberhofer, Naomichi Ogihara, Kevin J. McGowan, Kumar Mithraratne, Takeshi Yamasaki, Russell D. Gray, Ei Ichi Izawa
Software Mentions: 1
Published: over 8 years ago
10.1038/srep29247
Zero-valent Fe confined mesoporous silica nanocarriers (Fe(0) @ MCM-41) for targeting experimental orthotopic glioma in rats
Cited by: 28
Author(s): Maxim Shevtsov, Marina A. Parr, V. A. Ryzhov, E. G. Zemtsova, A. Yu. Arbenin, A. N. Ponomareva, В. М. Смирнов, Gabriele Multhoff
Software Mentions: 1
Published: over 8 years ago
10.1038/srep30209
Noninvasive, label-free, three-dimensional imaging of melanoma with confocal photothermal microscopy: Differentiate malignant melanoma from benign tumor tissue
Cited by: 17
Author(s): J. He, Nan Wang, Hiromichi Tsurui, Masashi Kato, Machiko Iida, Takayoshi Kobayashi
Software Mentions: 1
Published: over 8 years ago
10.1038/srep31787
Head movement, an important contributor to human cerebrospinal fluid circulation
Cited by: 46
Author(s): Qingyang Xu, Sheng-Bo Yu, Nan Zheng, Xiao-Ying Yuan, Yan-Yan Chi, Cong Liu, Xuemei Wang, Xiangtao Lin, Hong-Jin Sui
Software Mentions: 1
Published: over 8 years ago
10.1038/srep33574
High-Resolution Imaging by Adaptive Optics Scanning Laser Ophthalmoscopy Reveals Two Morphologically Distinct Types of Retinal Hard Exudates
Cited by: 14
Author(s): Muneo Yamaguchi, Shintaro Nakao, Yoshihiro Kaizu, Yoshiyuki Kobayashi, Takahito Nakama, Mitsuru Arima, Shigeo Yoshida, Yuji Oshima, Atsunobu Takeda, Yasuhiro Ikeda, Sonoyo Mukai, Tatsuro Ishibashi, Koh Hei Sonoda
Software Mentions: 1
Published: about 8 years ago
10.1038/srep35696
Emodin ameliorates bleomycin-induced pulmonary fibrosis in rats by suppressing epithelial-mesenchymal transition and fibroblast activation
Cited by: 51
Author(s): Ruijuan Guan, Xia Wang, Xiaomei Zhao, Nana Song, Ji‐Min Zhu, Ji‐Jiang Wang, Chunmei Xia, Yonghua Chen, Dawei Zhu, Lin‐Lin Shen
Software Mentions: 1
Published: about 8 years ago
10.1038/s41598-017-04379-0
Whole organ vascular casting and microCT examination of the human placental vascular tree reveals novel alterations associated with pregnancy disease
Cited by: 42
Author(s): Toluwalope Junaid, Robert S. Bradley, Rohan M. Lewis, John D. Aplin, Edward Johnstone
Software Mentions: 1
Published: over 7 years ago
10.1038/s41598-017-06126-x
Commensal Gut Microbiota Immunomodulatory Actions in Bone Marrow and Liver have Catabolic Effects on Skeletal Homeostasis in Health
Cited by: 79
Author(s): Chad M. Novince, Carolyn R. Whittow, Johannes D. Aartun, Jessica D. Hathaway, Nicole Poulides, Michael B. Chavez, Heidi M. Steinkamp, Kaeleigh A. Kirkwood, Emily Huang, Caroline Westwater, Keith L. Kirkwood
Software Mentions: 1
Published: over 7 years ago
10.1038/s41598-017-06882-w
CT-perfusion stroke imaging: a threshold free probabilistic approach to predict infarct volume compared to traditional ischemic thresholds
Cited by: 30
Author(s): Fabian Flottmann, Gabriel Broocks, Tobias D Faizy, Marielle Ernst, Nils D. Forkert, Malte Grosser, Götz Thomalla, Susanne Siemonsen, Jens Fiehler, André Kemmling
Software Mentions: 1
Published: over 7 years ago
10.1038/s41598-017-10390-2
The intestinal phosphate transporter NaPi-IIb (Slc34a2) is required to protect bone during dietary phosphate restriction
Cited by: 30
Author(s): Thomas Knöpfel, Eva M. Pastor-Arroyo, Udo Schnitzbauer, Denise V. Kratschmar, Alex Odermatt, Giovanni Pellegrini, Nati Hernando, Carsten A. Wagner
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-017-12590-2
Normobaric hyperoxia does not improve derangements in diffusion tensor imaging found distant from visible contusions following acute traumatic brain injury
Cited by: 2
Author(s): Tonny Veenith, Eleanor L Carter, Julia Grossac, Virginia Newcombe, Joanne Outtrim, Sri Nallapareddy, Victoria Lupson, Marta Correia, Marius Mada, Guy B. Williams, David Menon, Jonathan P. Coles
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-017-13581-z
Quantitative microglia analyses reveal diverse morphologic responses in the rat cortex after diffuse brain injury
Cited by: 163
Author(s): Helena W. Morrison, Kimberly Young, Mahir Qureshi, Rachel K. Rowe, Jonathan Lifshitz
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-017-14130-4
Pannexin1 links lymphatic function to lipid metabolism and atherosclerosis
Cited by: 16
Author(s): Filippo Molica, Merlijn J. Meens, Juan Dubrot, Avigail Ehrlich, Christel L Roth, Sandrine Morel, Graziano Pelli, Laurent Vinet, Vincent Braunersreuther, Osman Ratib, Marc Chanson, Stéphanie Hugues, Eliana Scemes, Brenda R. Kwak
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-018-19865-2
Mutant torsinA in the heterozygous DYT1 state compromises HSV propagation in infected neurons and fibroblasts
Cited by: 6
Author(s): Bence György, Leandro Cruz, David Yellen, Massimo Aufiero, Isabel Alland, Xuan Zhang, Maria Ericsson, Cornel Fraefel, Yu-Ching Li, Shuko Takeda, Bradley T. Hyman, Xandra O. Breakefield
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-018-21170-x
Compositional marker in vivo reveals intramyocellular lipid turnover during fasting-induced lipolysis
Cited by: 6
Author(s): Ajay Thankamony, Graham J. Kemp, Albert Koulman, Vlada Bokii, David B. Savage, Chris Boesch, Leanne Hodson, David B. Dunger, Alison Sleigh
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-018-23631-9
Low testosterone in ApoE/LDL receptor double-knockout mice is associated with rarefied testicular capillaries together with fewer and smaller Leydig cells
Cited by: 13
Author(s): K. Steinfeld, Daniela Beyer, Christian Mühlfeld, Andrea Mietens, Gerrit Eichner, B. Altinkilic, Marian Kampschulte, Qi Jiang, Gabriele A. Krombach, Thomas Linn, W. Weidner, Ralf Middendorff
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-018-24331-0
Reconstructing the Neanderthal brain using computational anatomy
Cited by: 90
Author(s): Takanori Kochiyama, Naomichi Ogihara, Hiroki C. Tanabe, Osamu Kondo, Hideki Amano, Kunihiro Hasegawa, Hiromasa Suzuki, Marcia S. Ponce de León, Christoph P.E. Zollikofer, Markus Bastir, Chris Stringer, Norihiro Sadato, Takeru Akazawa
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-018-26870-y
Ccl2 deficiency protects against chronic renal injury in murine renovascular hypertension
Cited by: 38
Author(s): Sonu Kashyap, Mazen Osman, Christopher M. Ferguson, Meryl C. Nath, Bhaskar Roy, Karen Lien, Karl A. Nath, Vesna D. Garovic, Lilach O. Lerman, Joseph P. Grande
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-018-30270-7
Linear and Volumetric Mandibular Asymmetries in Adult Patients With Different Skeletal Classes and Vertical Patterns: A Cone-Beam Computed Tomography Study
Cited by: 22
Author(s): Luz Victoria Mendoza, Carlos Bellot-Arcís, José María Montiel-Company, Verónica García-Sanz, José Manuel Almerich‐Silla, Vanessa Paredes-Gallardo
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-018-33616-3
Behavioral facilitation and increased brain responses from a high interference working memory context
Cited by: 7
Author(s): George Samrani, Petter Marklund, Lisa Engström, Daniel A. Broman, Jonas Persson
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-018-37620-5
Hydrocephalus in a rat model of Meckel Gruber syndrome with a TMEM67 mutation
Cited by: 19
Author(s): Joon W. Shim, Paul R. Territo, Stefanie Simpson, John C. Watson, Lei Jiang, Amanda A. Riley, Brian P. McCarthy, Scott C Persohn, Daniel H. Fulkerson, Bonnie L. Blazer‐Yost
Software Mentions: 1
Published: almost 6 years ago
10.1038/s41598-018-37906-8
Optimization of Pulmonary Vasculature Tridimensional Phenotyping in The Rat Fetus
Cited by: 3
Author(s): Emrah Aydın, Brittany Levy, Marc Oria, Hussam Nachabe, Lim Foong-Yen, José Luis Peiró
Software Mentions: 1
Published: almost 6 years ago
10.1038/s41598-019-38669-6
Quantitative Analysis of CT Images in Patients with Pyrrolizidine Alkaloid-Induced Sinusoidal Obstruction Syndrome
Cited by: 4
Author(s): Chao Wang, Xingwang Wu, Wenjie Xie, Xiaofei Ren, Weiping Zhang, Jianming Xu
Software Mentions: 1
Published: almost 6 years ago
10.1038/s41598-019-41050-2
Resveratrol, lunularin and dihydroresveratrol do not act as caloric restriction mimetics when administered intraperitoneally in mice
Cited by: 24
Author(s): Kathrin Pallauf, Dawn Chin, Ilka Günther, Marc Birringer, Kai Lüersen, Gerald Schultheiß, Sarah Vieten, Jürgen Krauß, Franz Bracher, Nicolas Danylec, Sebastian T. Soukup, Sabine E. Kulling, Gerald Rimbach
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-019-49428-y
Pioglitazone treatment prior to transplantation improves the efficacy of human mesenchymal stem cells after traumatic brain injury in rats
Cited by: 18
Author(s): Mahasweta Das, Karthick Mayilsamy, Xiaolan Tang, Jung Yeon Han, Elspeth Foran, Alison E. Willing, Shyam S. Mohapatra, Subhra Mohapatra
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-019-51577-z
Elevated FGF23 and disordered renal mineral handling with reduced bone mineralization in chronically erythropoietin over-expressing transgenic mice
Cited by: 9
Author(s): Arezoo Daryadel, Luciano Natale, Petra Seebeck, Carla Bettoni, Udo Schnitzbauer, Max Gassmann, Carsten A. Wagner
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-019-52449-2
Snake venom rhodocytin induces plasma extravasation via toxin-mediated interactions between platelets and mast cells
Cited by: 3
Author(s): Yuki Nakamura, Takeshi Sasaki, Chihiro Mochizuki, Kayoko Ishimaru, Schuichi Koizumi, Hideyuki Shinmori, Katsue Suzuki‐Inoue, Akihiro Nakao
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-019-53380-2
Ultra-thin fluorocarbon foils optimise multiscale imaging of three-dimensional native and optically cleared specimens
Cited by: 18
Author(s): Katharina Hötte, Michael Koch, Lotta Hof, Marcel Tuppi, Till Moreth, Monique M A Verstegen, Luc J. W. van der Laan, Ernst H. K. Stelzer, Francesco Pampaloni
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-019-55709-3
Caspase-3 knockout inhibits intervertebral disc degeneration related to injury but accelerates degeneration related to aging
Cited by: 21
Author(s): Takashi Ohnishi, Kei Yamada, Koji Iwasaki, Takeru Tsujimoto, Hideaki Higashi, Taichi Kimura, Norimasa Iwasaki, Hideki Sudo
Software Mentions: 1
Published: almost 5 years ago
10.1038/s41598-020-58917-4
Rapid and Precise Semi-Automatic Axon Quantification in Human Peripheral Nerves
Cited by: 14
Author(s): Simon Engelmann, Marc Ruewe, Sebastian Geis, Christian D. Taeger, Michael Kehrer, Ernst R. Tamm, Ronald L. A. W. Bleys, Florian Zeman, Lukas Prantl, Andreas Kehrer
Software Mentions: 1
Published: almost 5 years ago
10.1038/s41598-020-69741-1
Clinical and neuroimaging factors associated with aphasia severity in stroke patients: diffusion tensor imaging study
Cited by: 9
Author(s): Sekwang Lee, Yoonhye Na, Woo Suk Tae, Sung Bom Pyun
Software Mentions: 1
Published: over 4 years ago
10.1038/s41598-020-69948-2
Development of a miniaturized 96-Transwell air–liquid interface human small airway epithelial model
Cited by: 30
Author(s): Teresa Bluhmki, Sarah Bitzer, Julia A. Gindele, Eva Schruf, Tobias Kiechle, Megan Webster, Jürgen Schymeinsky, Robert Ries, Florian Gantner, Daniel Bischoff, James P. Garnett, Ralf Heilker
Software Mentions: 1
Published: over 4 years ago
10.1038/s41598-020-71749-6
Deficiency of the SMOC2 matricellular protein impairs bone healing and produces age-dependent bone loss
Cited by: 13
Author(s): Supawich Morkmued, François Clauss, Brigitte Schuhbaur, Valérie Fraulob, Éric Mathieu, Joseph Hemmerlé, Hans Clevers, Bon‐Kyoung Koo, Pascal Dollé, Agnès Bloch‐Zupan, Karen Niederreither
Software Mentions: 1
Published: about 4 years ago
10.1038/s41598-020-74588-7
Disordered metabolism in mice lacking irisin
Cited by: 32
Author(s): Yunjing Luo, Xiaoyong Qiao, Yaxian Ma, Hongxia Deng, Charles C. Xu, Liangzhi Xu
Software Mentions: 1
Published: about 4 years ago
10.1038/s41598-020-74920-1
Image segmentation of plexiform neurofibromas from a deep neural network using multiple b-value diffusion data
Cited by: 4
Author(s): Chang Yueh Ho, John M. Kindler, Scott C Persohn, Stephen F. Kralik, Kent A. Robertson, Paul R. Territo
Software Mentions: 1
Published: about 4 years ago
10.1038/s41598-020-71293-3
In-vivo lung fibrosis staging in a bleomycin-mouse model: a new micro-CT guided densitometric approach
Cited by: 26
Author(s): Laura Mecozzi, Martina Mambrini, Francesca Ruscitti, Erica Ferrini, Roberta Ciccimarra, Francesca Ravanetti, Nicola Sverzellati, Mario Silva, Livia Ruffini, Sasha Belenkov, Maurizio Civelli, Gino Villetti, Franco Fabio Stellari
Software Mentions: 1
Published: about 4 years ago
10.1038/s41598-020-78153-0
Sonodynamic therapy in combination with photodynamic therapy shows enhanced long-term cure of brain tumor
Cited by: 25
Author(s): Ballav Moni Borah, Joseph Cacaccio, Farukh A. Durrani, Wiam Bshara, Steven G. Turowski, Joseph A. Spernyak, Ravindra K. Pandey
Software Mentions: 1
Published: almost 4 years ago
10.1038/s41598-020-80550-4
Establishment of an efficient in vitro propagation protocol for Sumac (Rhus coriaria L.) and confirmation of the genetic homogeneity
Cited by: 21
Author(s): Saleh Amiri, Reza Mohammadi
Software Mentions: 1
Published: almost 4 years ago