Projects: cran: vegan
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/vegan
Community Ecology Package
87 versions
Latest release: almost 4 years ago
202 dependent packages
91,351 downloads last month
Enhanced Analysis
Educational Contributors:
ghanni@upenn.edu
pminchi@siue.edu
hezibuba@mail.tau.ac.il
Repository Activity:
Repository Owner:
vegandevs (organization)
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
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+60
Educational commit emails
3 contributors with educational email addresses -
+2
Science terms in README
1 scientific terms found in README
Penalties:
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-15
No science keywords
No scientific terms found in keywords/classifiers
Very Likely Science (100)
Papers Mentioning vegan 6,903
10.1371/journal.pone.0245965
Genetic diversity of native and cultivated Ugandan Robusta coffee (Coffea canephora Pierre ex A. Froehner): Climate influences, breeding potential and diversity conservationCited by: 17
Author(s): Catherine Kiwuka, Eva Goudsmit, Rémi Tournebize, Sinara Oliveira de Aquino, Jacob C. Douma, Laurence Bellanger, Dominique Crouzillat, Piet Stoffelen, Ucu Sumirat, Hyacinthe Legnaté, Pierre Marraccini, Alexandre de Kochko, Alan Carvalho Andrade, John Wasswa Mulumba, Pascal Musoli, Niels P. R. Anten, Valérie Poncet
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0088746
Genetic Structure and Natal Origins of Immature Hawksbill Turtles (Eretmochelys imbricata) in Brazilian WatersCited by: 29
Author(s): Maíra Carneiro Proietti, Júlia Reisser, Luís Fernando Marins, Clara J. Rodríguez-Zárate, Maria Ângela Marcovaldi, Danielle Monteiro, Charitha Pattiaratchi, Eduardo R. Secchi
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0099838
Individual-Based Ant-Plant Networks: Diurnal-Nocturnal Structure and Species-Area RelationshipCited by: 65
Author(s): Wesley Dáttilo, Roberth Fagundes, Carlos Augusto Queiroz Gurka, Mara S. A. Silva, Marisa C. L. Vieira, Thiago J. Izzo, Cecilia Díaz‐Castelazo, Kleber Del‐Claro, Víctor Rico-Gray
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0111560
High Abundances of Potentially Active Ammonia-Oxidizing Bacteria and Archaea in Oligotrophic, High-Altitude Lakes of the Sierra Nevada, California, USACited by: 28
Author(s): Curtis J. Hayden, J. Michael Beman
Software Mentions: 1
Published: almost 12 years ago
10.1371/journal.pone.0125550
Contrasting Diversity and Host Association of Ectomycorrhizal Basidiomycetes versus Root-Associated Ascomycetes in a Dipterocarp RainforestCited by: 21
Author(s): Hirotoshi Sato, Akifumi S. Tanabe, Hirokazu Toju
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0053285
Trustworthy-Looking Face Meets Brown EyesCited by: 62
Author(s): Karel Kleisner, Lenka Příplatová, Peter Fröst, Jaroslav Flegr
Software Mentions: 1
Published: over 13 years ago
10.1371/journal.pone.0103859
Responses of Soil Microbial Communities to Experimental Warming in Alpine Grasslands on the Qinghai-Tibet PlateauCited by: 33
Author(s): Bin Zhang, Shengyun Chen, Xingyuan He, Wenjie Liu, Qian Zhao, Lin Zhao, Chunjie Tian
Software Mentions: 1
Published: about 12 years ago
10.3390/microorganisms8091352
Molecular Characterization of the Myoliquefactive Fish Parasite Kudoa mirabilis (Cnidaria, Kudoidae) from SW Indian Ocean and Its Phylogenetic Relationship with the Kudoa thyrsites Species ComplexCited by: 9
Author(s): Lucilla Giulietti, Egil Karlsbakk, Paolo Cipriani, Salome Daniel Shayo, Julia E. Storesund, Arne Levsen
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0190686
Diversity patterns, Leishmania DNA detection, and bloodmeal identification of Phlebotominae sand flies in villages in northern ColombiaCited by: 21
Author(s): Camila González, Cielo León, Andrea Paz, Marla López, Gisell Molina, Diana Mota Toro, Mario I. Ortiz, Juan Manuel Cordovez, María Claudia Atencia, Germán Aguilera, Catalina Tovar
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0103623
Taxonomic and Numerical Resolutions of Nepomorpha (Insecta: Heteroptera) in Cerrado StreamsCited by: 21
Author(s): Núbia França da Silva Giehl, Karina Dias-Silva, Leandro Juen, Joana Darc Batista, Helena Soares Ramos Cabette
Software Mentions: 1
Published: about 12 years ago
10.1128/mBio.01969-20
Metagenomic Next-Generation Sequencing of Nasopharyngeal Specimens Collected from Confirmed and Suspect COVID-19 PatientsCited by: 109
Author(s): Heba H. Mostafa, John A. Fissel, Brian Fanelli, Yehudit Bergman, Victoria Gniazdowski, Manoj Dadlani, Karen C. Carroll, Rita R. Colwell, Patricia J. Simner
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0198628
Soil propagule bank of ectomycorrhizal fungi associated with Masson pine (Pinus massoniana) grown in a manganese mine wastelandCited by: 7
Author(s): Jian Huang, Qisheng Han, Junjian Li
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0036196
Effects of Trophic Skewing of Species Richness on Ecosystem Functioning in a Diverse Marine CommunityCited by: 14
Author(s): Pamela L. Reynolds, John F. Bruno
Software Mentions: 1
Published: over 14 years ago
10.3390/microorganisms7090320
Predictors of Obesity among Gut Microbiota Biomarkers in African American Men with and without DiabetesCited by: 25
Author(s): Elena Barengolts, Stefan J. Green, George E. Chlipala, Brian T. Layden, Yuval Eisenberg, Medha Priyadarshini, Lara R. Dugas
Software Mentions: 1
Published: about 7 years ago
10.1371/journal.pone.0194080
Specialized core bacteria associate with plants adapted to adverse environment with high calcium contentsCited by: 7
Author(s): Fēi Li, Ximin Zhang, Jirui Gong, Lunxian Liu, Yin Yi
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0160238
Thirty Years of Compositional Change in an Old-Growth Temperate Forest: The Role of Topographic Gradients in Oak-Maple DynamicsCited by: 24
Author(s): Julia I. Chapman, Ryan W. McEwan
Software Mentions: 1
Published: about 10 years ago
10.1371/journal.pone.0096397
Arbuscular Mycorhizal Fungi Associated with the Olive Crop across the Andalusian Landscape: Factors Driving Community DifferentiationCited by: 30
Author(s): Miguel Montes-Borrego, Madis Metsis, Blanca B. Landa
Software Mentions: 1
Published: over 12 years ago
10.1128/mBio.01306-21
A Novel Freshwater to Marine Evolutionary Transition Revealed within <i>Methylophilaceae</i> Bacteria from the Arctic OceanCited by: 12
Author(s): Arthi Ramachandran, Susan McLatchie, David A. Walsh
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0140301
Genome-Wide Association Studies of the Human Gut MicrobiotaCited by: 207
Author(s): Emily Davenport, Darren A. Cusanovich, Katelyn Michelini, Luis B. Barreiro, Carole Ober, Yoav Gilad
Software Mentions: 1
Published: almost 11 years ago
10.1371/journal.pone.0085279
Driving Factors for the Evolution of Species-Specific Echolocation Call Design in New World Free-Tailed Bats (Molossidae)Cited by: 89
Author(s): Kirsten Jung, Jesús Molinari, Elisabeth K. V. Kalko
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0145001
Community Structure of Arbuscular Mycorrhizal Fungi in Rhizospheric Soil of a Transgenic High-Methionine Soybean and a Near Isogenic VarietyCited by: 17
Author(s): Jingang Liang, Fang Meng, Shi Sun, Chen Wu, Haiying Wu, Ming‐Rong Zhang, Haifeng Zhang, Xiaobo Zheng, Xinyuan Song, Zhengguang Zhang
Software Mentions: 1
Published: almost 11 years ago
10.1186/s40168-019-0749-8
Stochastic processes shape microeukaryotic community assembly in a subtropical river across wet and dry seasonsCited by: 251
Author(s): Weidong Chen, Kexin Ren, Alain Isabwe, Huihuang Chen, Min Liu, Jun Yang
Software Mentions: 1
Published: almost 7 years ago
10.3390/microorganisms8020198
Planktonic Bacterial and Archaeal Communities in an Artificially Irrigated Estuarine Wetland: Diversity, Distribution, and Responses to Environmental ParametersCited by: 4
Author(s): Mingyue Li, Tiezhu Mi, Zhigang Yu, Manman Ma, Yu Zhen
Software Mentions: 1
Published: over 6 years ago
10.1128/mSphere.00312-16
Interactions of Respiratory Viruses and the Nasal Microbiota during the First Year of Life in Healthy InfantsCited by: 45
Author(s): Insa Korten, Moana Mika, Shkipe Klenja, Elisabeth Kieninger, Ines Mack, Maria Teresa Barbani, Meri Gorgievski, Urs Frey, Markus Hilty, Philipp Latzin
Software Mentions: 1
Published: almost 10 years ago
10.1371/journal.pone.0166794
High Diversity and Variability in the Vaginal Microbiome in Women following Preterm Premature Rupture of Membranes (PPROM): A Prospective Cohort StudyCited by: 58
Author(s): Teenus Jayaprakash, Emily Wagner, Julie van Schalkwyk, Arianne Albert, Janet E. Hill, Deborah Money
Software Mentions: 1
Published: almost 10 years ago
10.1371/journal.pone.0100061
Extreme Heterogeneity in Parasitism Despite Low Population Genetic Structure among Monarch Butterflies Inhabiting the Hawaiian IslandsCited by: 11
Author(s): Amanda A. Pierce, Jacobus C. de Roode, Sonia Altizer, Rebecca A. Bartel
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0192967
Manipulation of the rhizosphere microbial community through application of a new bio-organic fertilizer improves watermelon quality and healthCited by: 45
Author(s): Jia Zhao, Jiang Liu, Liu Hong, Jing Huang, Zhe Chen, Yuanjun Nie, Changbiao Wang, Yuguo Wang
Software Mentions: 1
Published: over 8 years ago
10.3390/microorganisms8060836
Soil Bacterial Diversity and Potential Functions Are Regulated by Long-Term Conservation Tillage and Straw MulchingCited by: 24
Author(s): Chang Liu, Lingling Li, Jinsheng Xie, Jeffrey A. Coulter, Renzhi Zhang, Zhen Luo, Liqun Cai, Lin Lin Wang, Subramaniam Gopalakrishnan
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0135352
Key Edaphic Properties Largely Explain Temporal and Geographic Variation in Soil Microbial Communities across Four BiomesCited by: 78
Author(s): Kathryn M. Docherty, Hannah M. Borton, N. J. Espinosa, Martha Gebhardt, Juliana Gil-Loaiza, Jessica Gutknecht, Patrick Maes, Brendon M. Mott, John Jacob Parnell, Gayle Purdy, Pedro A P Rodrigues, Lee F. Stanish, Olivia N. Walser, Rachel E. Gallery
Software Mentions: 1
Published: almost 11 years ago
10.3390/microorganisms6040105
Dynamics of a Perturbed Microbial Community during Thermophilic Anaerobic Digestion of Chemically Defined Soluble Organic CompoundsCited by: 11
Author(s): Luka Šafarič, Sepehr Shakeri Yekta, Tong Liu, Bo Svensson, Anna Schnürer, David Bastviken, Annika Björn
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0139437
Assessment of Bacterial Community Assembly Patterns and Processes in Pig Manure SlurryCited by: 12
Author(s): Priyanka Kumari, Hee Sun Choi, Sartika Indah Amalia Sudiarto
Software Mentions: 1
Published: about 11 years ago
10.1371/journal.pone.0210357
Environmental DNA metabarcoding for fish community analysis in backwater lakes: A comparison of capture methodsCited by: 86
Author(s): Kanji Fujii, Hideyuki Doi, Shiro Matsuoka, Mariko Nagano, Hirotoshi Sato, Hiroki Yamanaka
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0143479
Insect Pollinators in Iowa Cornfields: Community Identification and Trapping Method AnalysisCited by: 25
Author(s): Margaret J. Wheelock, Matthew E. O’Neal
Software Mentions: 1
Published: about 10 years ago
10.1371/journal.pone.0098741
Changes in Abundance of Oral Microbiota Associated with Oral CancerCited by: 266
Author(s): Brian L. Schmidt, Justin Kuczynski, Aditi Bhattacharya, Bing Huey, Patricia Corby, Erica Queiroz, K Florence Nightingale, Alexander Ross Kerr, Mark D. DeLacure, Ratna Veeramachaneni, Adam B. Olshen, Donna G. Albertson, Muy-Teck Teh
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0165761
Floral Scent Mimicry and Vector-Pathogen Associations in a Pseudoflower-Inducing Plant Pathogen SystemCited by: 18
Author(s): Scott H. McArt, Timothy D. Miles, Cesar Rodriguez‐Saona, A. M. C. Schilder, Lynn S. Adler, Matthew J. Grieshop
Software Mentions: 1
Published: almost 10 years ago
10.1371/journal.pone.0168096
VH1 Family Immunoglobulin Repertoire Sequencing after Allogeneic Hematopoietic Stem Cell TransplantationCited by: 6
Author(s): Maya K. Sethi, Felicitas Thol, Michael Stadler, Michael Heuser, Arnold Ganser, Christian Koenecke, Oliver Pabst
Software Mentions: 1
Published: over 9 years ago
10.1128/mSphere.00460-18
Oral Administration of Porphyromonas gingivalis Alters the Gut Microbiome and Serum MetabolomeCited by: 116
Author(s): Tamotsu Kato, Kyoko Yamazaki, Mayuka Nakajima, Yasuhiro Date, Jun Kikuchi, Koji Hase, Hiroshi Ohno, Kazuhisa Yamazaki
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0053332
Genetic and Morphometric Divergence of an Invasive Bird: The Introduced House Sparrow (Passer domesticus) in BrazilCited by: 16
Author(s): Marcos Robalinho Lima, Regina H. Macêdo, Thaís L. F. Martins, Aaron W. Schrey, Lynn B. Martin, Staffan Bensch
Software Mentions: 1
Published: almost 14 years ago
10.1371/journal.pone.0168417
Joint Effect of Habitat Identity and Spatial Distance on Spiders’ Community Similarity in a Fragmented Transition ZoneCited by: 8
Author(s): Yoni Gavish, Yaron Ziv
Software Mentions: 1
Published: almost 10 years ago
10.1371/journal.pone.0238882
Temporal changes in the fecal bacterial community in Holstein dairy calves from birth through the transition to a solid dietCited by: 15
Author(s): Meagan L. Hennessy, Nagaraju Indugu, Bonnie Vecchiarelli, Joseph S. Bender, C Pappalardo, Miranda Leibstein, John D. Toth, Ananya Katepalli, Satvik Garapati, Dipti Pitta
Software Mentions: 1
Published: about 6 years ago
10.3390/microorganisms7110525
Distinct Microbial Community of Phyllosphere Associated with Five Tropical Plants on Yongxing Island, South China SeaCited by: 11
Author(s): Lijun Bao, Wenyang Cai, Xiaofen Zhang, Jinhong Liu, Hao Chen, Yuansong Wei, Xiuxiu Jia, Zhihui Bai
Software Mentions: 1
Published: almost 7 years ago
10.3390/microorganisms9040714
Diversity of Microorganisms in Biocrusts Surrounding Highly Saline Potash Tailing Piles in GermanyCited by: 6
Author(s): Ekaterina Pushkareva, Veronika Sommer, Israel Barrantes, Ulf Karsten
Software Mentions: 1
Published: over 5 years ago
10.3390/microorganisms8060834
Intercropping with Potato-Onion Enhanced the Soil Microbial Diversity of TomatoCited by: 27
Author(s): Naihui Li, Danmei Gao, Xingang Zhou, Shaocan Chen, Chunxia Li, Fengzhi Wu
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0170336
Lower Mesophotic Coral Communities (60-125 m Depth) of the Northern Great Barrier Reef and Coral SeaCited by: 31
Author(s): Norbert Englebert, Pim Bongaerts, Paul Muir, Kyra B. Hay, Michel Pichon, Ove Hoegh‐Guldberg
Software Mentions: 1
Published: over 9 years ago
10.3390/microorganisms9051071
In Vitro Fermentation Characteristics and Fiber-Degrading Enzyme Kinetics of Cellulose, Arabinoxylan, β-Glucan and Glucomannan by Pig Fecal MicrobiotaCited by: 19
Author(s): Yu Bai, Xingjian Zhou, Na Li, Jinbiao Zhao, Yue Hao, Shuai Zhang, Hsi-Chi Yang, Yu Pi, Shiyu Tao, Dandan Han, Shuai Zhang, Junjun Wang
Software Mentions: 1
Published: over 5 years ago
10.1002/ece3.1072
Bird and mammal species composition in distinct geographic regions and their relationships with environmental factors across multiple spatial scalesCited by: 12
Author(s): Rafi Kent, Avi Bar‐Massada, Yohay Carmel
Software Mentions: 1
Published: over 12 years ago
10.1002/ece3.747
Massive structural and compositional changes over two decades in forest fragments near Kampala, UgandaCited by: 7
Author(s): Collins Edward Bulafu, Deborah Baranga, Patrick Mucunguzi, Richard J. Telford, Vigdis Vandvik
Software Mentions: 1
Published: about 13 years ago
10.1002/ece3.2358
Evidence for ecological speciation via a host shift in the holly leaf miner, <i>Phytomyza glabricola</i> (Diptera: Agromyzidae)Cited by: 6
Author(s): Julie B. Hébert, Sonja J. Scheffer, David J. Hawthorne
Software Mentions: 1
Published: about 10 years ago
10.1002/ece3.1879
Effects of fertilization on microbial abundance and emissions of greenhouse gases (<scp>CH</scp><sub>4</sub> and N<sub>2</sub>O) in rice paddy fieldsCited by: 29
Author(s): Xianfang Fan, Haiyang Yu, Qingqing Wu, Jing Ma, Hong‐Guang Xu, Jinghui Yang, Zhuang YiQing
Software Mentions: 1
Published: over 10 years ago
10.1002/ece3.2289
Detecting the small island effect and nestedness of herpetofauna of the West IndiesCited by: 18
Author(s): De Gao, Gad Perry
Software Mentions: 1
Published: about 10 years ago
10.3390/microorganisms8040598
Effect of Cobalt, Nickel, and Selenium/Tungsten Deficiency on Mesophilic Anaerobic Digestion of Chemically Defined Soluble Organic CompoundsCited by: 18
Author(s): Luka Šafarič, Sepehr Shakeri Yekta, Bo Svensson, Anna Schnürer, David Bastviken, Annika Björn
Software Mentions: 1
Published: over 6 years ago
10.1002/ece3.7373
Gut microbial ecology of the Critically Endangered Fijian crested iguana ( <i>Brachylophus vitiensis</i> ): Effects of captivity status and host reintroduction on endogenous microbiomesCited by: 10
Author(s): Samuel J. Eliades, Joseph Brown, Timothy J. Colston, Robert N. Fisher, Jone Niukula, Kim Gray, Jhabar Vadada, Sia Rasalato, Cameron D. Siler
Software Mentions: 1
Published: over 5 years ago
10.1002/ece3.7140
Response of macroinvertebrate communities to land use and water quality in Wudalianchi LakeCited by: 4
Author(s): Xiang Du, Dan Song, Kun Ming, Xing Jin, Huibo Wang, Le Wang, Hui Liu, Chen Zhao, Tangbin Huo
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0189104
Two decades of climate driving the dynamics of functional and taxonomic diversity of a tropical small mammal community in western MexicoCited by: 12
Author(s): Edgard David Mason-Romo, Ariel A. Farías, Gerardo Ceballos
Software Mentions: 1
Published: almost 9 years ago
10.1002/ece3.4293
Spatial scale‐dependent phylogenetic signal in species distributions along geographic and elevation gradients in a mountainous rangelandCited by: 15
Author(s): Maral Pashirzad, Hamid Ejtehadi, Jamil Vaezi, Richard P. Shefferson
Software Mentions: 1
Published: almost 8 years ago
10.1002/ece3.5540
Contrasting diversity patterns of breeding Anatidae in the Northern and Southern HemispheresCited by: 5
Author(s): Qing Zeng, Jessica Reid, Neil Saintilan, Matthew J. Colloff, Guangchun Lei, Lei Wen
Software Mentions: 1
Published: about 7 years ago
10.1002/ece3.4682
Partitioning drivers of spatial genetic variation for a continuously distributed population of boreal caribou: Implications for management unit delineationCited by: 10
Author(s): Pauline Priadka, Micheline Manseau, Tim Trottier, Dave Hervieux, Paul Galpern, Philip D. McLoughlin, Paul J. Wilson
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0018603
Behavioural Thermoregulatory Tactics in Lacustrine Brook Charr, Salvelinus fontinalisCited by: 33
Author(s): Andrea Bertolo, Marc Pépino, J. Stephens Adams, Pierre Magnan
Software Mentions: 1
Published: over 15 years ago
10.1002/ece3.7508
Network analyses reveal the role of large snakes in connecting feeding guilds in a species‐rich Amazonian snake communityCited by: 1
Author(s): Daniela Pinto-Coelho, Marcio Roberto Martins, Paulo R. Guimarães
Software Mentions: 1
Published: over 5 years ago
10.1002/ece3.5409
Oribatid mites reveal that competition for resources and trophic structure combine to regulate the assembly of diverse soil animal communitiesCited by: 21
Author(s): Matthew Magilton, Mark Maraun, Mark Emmerson, Tancredi Caruso
Software Mentions: 1
Published: over 7 years ago
10.1002/ece3.2536
Spatial subsidies in spider diets vary with shoreline structure: Complementary evidence from molecular diet analysis and stable isotopesCited by: 29
Author(s): Peter A. Hambäck, Elisabeth Weingartner, Love Dalén, Helena Wirta, Tomas Roslin
Software Mentions: 1
Published: almost 10 years ago
10.1002/ece3.5231
Local adaptation does not lead to genome‐wide differentiation in lava flow lizardsCited by: 12
Author(s): Alexander R. Krohn, Eveline T. Diepeveen, Ke Bi, Erica Bree Rosenblum
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0247633
Evaluation of the orally administered calcium alginate aerogel on the changes of gut microbiota and hepatic and renal function of Wistar ratsCited by: 6
Author(s): Mohammad A. A. Al-Najjar, Tamara Athamneh, Reem Fawaz Abutayeh, Iman A. Basheti, Claudia Leopold, Pavel Gurikov, Ирина Смирнова
Software Mentions: 1
Published: over 5 years ago
10.1002/ece3.927
Changes in ground beetle assemblages above and below the treeline of the<scp>D</scp>olomites after almost 30 years (1980/2009)Cited by: 44
Author(s): Roberto Pizzolotto, Mauro Gobbi, Pietro Brandmayr
Software Mentions: 1
Published: over 12 years ago
10.1002/ece3.4943
Phenotypic and genetic diversity in aposematic Malagasy poison frogs (genus <i>Mantella</i> )Cited by: 9
Author(s): Karina Klonoski, Ke Bi, Erica Bree Rosenblum
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0238550
Recovery and variation of the coastal fish community following a cold intrusion event in the Penghu Islands, TaiwanCited by: 3
Author(s): Hungyen Chen, Ching-Yi Chen, Kwang‐Tsao Shao
Software Mentions: 1
Published: about 6 years ago
10.1002/ece3.4809
Environmental DNA metabarcoding of wild flowers reveals diverse communities of terrestrial arthropodsCited by: 101
Author(s): Philip Francis Thomsen, Eva Egelyng Sigsgaard
Software Mentions: 1
Published: over 7 years ago
10.1002/ece3.3307
Rhododendron aureum Georgi formed a special soil microbial community and competed with above‐ground plants on the tundra of the Changbai Mountain, ChinaCited by: 6
Author(s): Xiaolong Wang, Lin Li, Wei Zhao, Jiaxin Zhao, Xia Chen
Software Mentions: 1
Published: about 9 years ago
10.1002/ece3.7019
Disentangling effects of disturbance severity and frequency: Does bioindication really work?Cited by: 5
Author(s): Remigiusz Pielech, Patryk Czortek
Software Mentions: 1
Published: almost 6 years ago
10.1002/ece3.3493
How beta diversity and the underlying causes vary with sampling scales in the Changbai mountain forestsCited by: 13
Author(s): Liangcheng Tan, Chunyu Fan, Chunyu Zhang, Klaus von Gadow, Xiuhua Fan
Software Mentions: 1
Published: almost 9 years ago
10.1002/ece3.2276
Species traits and environmental characteristics together regulate ant‐associated biodiversityCited by: 5
Author(s): Kaitlin U. Campbell, Thomas O. Crist
Software Mentions: 1
Published: about 10 years ago
10.1002/ece3.5967
Legacy forest structure increases bird diversity and abundance in aging young forestsCited by: 11
Author(s): Juliana Hanle, Marlyse C. Duguid, Mark S. Ashton
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pntd.0006709
Field-collected Triatoma sordida from central Brazil display high microbiota diversity that varies with regard to developmental stage and intestinal segmentationCited by: 30
Author(s): Joana L. Oliveira, José Cury, Rodrigo Gurgel-Gonçalves, Ana C. Bahia, Fernando A. Monteiro
Software Mentions: 1
Published: about 8 years ago
10.1002/ece3.2606
Co‐occurrence patterns in a diverse arboreal ant community are explained more by competition than habitat requirementsCited by: 47
Author(s): Flávio Camarota, Scott Powell, Adriano S. Melo, Galen V. Priest, Robert J. Marquis, Heraldo L. Vasconcelos
Software Mentions: 1
Published: almost 10 years ago
10.1002/ece3.745
Distinguishing the importance between habitat specialization and dispersal limitation on species turnoverCited by: 17
Author(s): Shixiong Wang, Xiaoan Wang, Hua Guo, Wei Fan, Haiying Lv, Renyan Duan
Software Mentions: 1
Published: about 13 years ago
10.1002/ece3.5866
Concealed truth: Modeling reveals unique Quaternary distribution dynamics and refugia of four related endemic keystone <i>Abies</i> taxa on the Tibetan PlateauCited by: 3
Author(s): Qinli Xiong, Marwa Waseem A. Halmy, Mohammed A. Dakhil, Bipin Pandey, Fengying Zhang, Lin Zhang, Kaiwen Pan, Ting Li, Xiaoming Sun, Xiaogang Wu, Yang Xiao
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pntd.0005963
Impact of Enterobius vermicularis infection and mebendazole treatment on intestinal microbiota and host immune responseCited by: 22
Author(s): Chien‐Chih Yang, Chao Liang, Chia-Feng Lin, Chiung-Tzu Hsiao, Ching‐Tien Peng, Hung‐Chih Lin, Jan‐Gowth Chang
Software Mentions: 1
Published: about 9 years ago
10.1002/ece3.2797
Environmental control of the microfaunal community structure in tropical bromeliadsCited by: 17
Author(s): Pavel Kratina, Jana S. Petermann, Nicholas A. C. Marino, A Macdonald, Diane S. Srivastava
Software Mentions: 1
Published: over 9 years ago
10.1128/mSphere.00984-19
Perinatal Antibiotic Exposure Affects the Transmission between Maternal and Neonatal Microbiota and Is Associated with Early-Onset SepsisCited by: 39
Author(s): Ping Zhou, Yanxia Zhou, Bin Liu, Zhenchao Jin, Xueling Zhuang, Wenkui Dai, Zhenyu Yang, Xin Feng, Qian Zhou, Yanhong Liu, Ximing Xu, Lian Zhang
Software Mentions: 1
Published: over 6 years ago
10.1038/s42003-020-0860-1
Deep microbial proliferation at the basalt interface in 33.5–104 million-year-old oceanic crustCited by: 27
Author(s): Yohey Suzuki, Seiya Yamashita, Mariko Kouduka, Yutaro Ao, Hiroki Mukai, Satoshi Mitsunobu, Hiroyuki Kagi, Steven Dhondt, Fumio Inagaki, Yuki Morono, Takao Hoshino, Naotaka Tomioka, Motoo Ito
Software Mentions: 1
Published: over 6 years ago
10.3390/cells9020376
Interventional Influence of the Intestinal Microbiome Through Dietary Intervention and Bowel Cleansing Might Improve Motor Symptoms in Parkinson’s DiseaseCited by: 53
Author(s): Tobias Hegelmaier, Marco Lebbing, Alexander Duscha, Laura Tomaske, Lars Tönges, Jacob Bak Holm, Henrik Bjørn Nielsen, Sören Gatermann, H. Przuntek, Aiden Haghikia
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-60540-2
Integrated metabolome analysis reveals novel connections between maternal fecal metabolome and the neonatal blood metabolome in women with gestational diabetes mellitusCited by: 14
Author(s): Chun-Chao Zhao, Jun Ge, Xia Li, Ruifen Jiao, Yuan Li, Huili Quan, Jianguo Li, Qing Guo, Wenju Wang
Software Mentions: 1
Published: over 6 years ago
10.1016/j.chom.2017.03.002
Age-Associated Microbial Dysbiosis Promotes Intestinal Permeability, Systemic Inflammation, and Macrophage DysfunctionCited by: 709
Author(s): Netusha Thevaranjan, Alicja Puchta, Christian Schulz, Avee Naidoo, Jake C. Szamosi, Chris P. Verschoor, Dessi Loukov, L. Patrick Schenck, Jennifer Jury, Kevin P. Foley, Jonathan D. Schertzer, Maggie Larché, Donald J. Davidson, Elena F. Verdú, Michael G. Surette, Dawn M. E. Bowdish
Software Mentions: 1
Published: over 9 years ago
10.1038/s41421-021-00257-2
Characterization of respiratory microbial dysbiosis in hospitalized COVID-19 patientsCited by: 30
Author(s): Zhong Huang, Yanqun Wang, Zhun Shi, Lu Zhang, Huahui Ren, Weiqun He, Zhaoyong Zhang, Airu Zhu, Jingxian Zhao, Fei Xiao, Fangming Yang, Tianzhu Liang, Feng Yang, Bei Zhong, Si-Min Ruan, Mian Gan, Jiahui Zhu, Fang Li, Fuqiang Li, Daxi Wang, Jiandong Li, Peng Ren, Shida Zhu, Huanming Yang, Jian Wang, Karsten Kristiansen, Hein Min Tun, Weijun Chen, Nanshan Zhong, Xun Xu, Yimin Li, Junhua Li, Jincun Zhao
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pntd.0002507
Mosquito Vector Diversity across Habitats in Central Thailand Endemic for Dengue and Other Arthropod-Borne DiseasesCited by: 87
Author(s): Panpim Thongsripong, Amy Green, Pattamaporn Kittayapong, Durrell D. Kapan, Bruce A. Wilcox, Shannon N. Bennett
Software Mentions: 1
Published: almost 13 years ago
10.1155/2018/3292309
Hirschsprung’s Associated Enterocolitis (HAEC) Personalized Treatment with Probiotics Based on Gene Sequencing Analysis of the Fecal MicrobiomeCited by: 3
Author(s): Georg Singer, Karl Kashofer, Christoph Castellani, Holger Till
Software Mentions: 1
Published: almost 8 years ago
10.3390/microorganisms6040124
The Isolation and Identification of Bacteria on Feathers of Migratory Bird SpeciesCited by: 2
Author(s): Antonella Giorgio, Salvatore De Bonis, Rosario Balestrieri, Giovanni Rossi, Marco Guida
Software Mentions: 1
Published: almost 8 years ago
10.3390/cancers13163999
Gut Microbiota Dynamics during Chemotherapy in Epithelial Ovarian Cancer Patients Are Related to Therapeutic OutcomeCited by: 17
Author(s): Federica D’Amico, Anna Myriam Perrone, Simone Rampelli, Sara Coluccelli, Monica Barone, Gloria Ravegnini, Marco Fabbrini, Patrizia Brigidi, Pierandrea De Iaco, Silvia Turroni
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0062026
Impact of Oral Typhoid Vaccination on the Human Gut Microbiota and Correlations with S. Typhi-Specific Immunological ResponsesCited by: 78
Author(s): Emiley A. Eloe‐Fadrosh, Monica A. McArthur, Anna M. Seekatz, Elliott F. Drábek, David A. Rasko, Marcelo B. Sztein, Claire M. Fraser
Software Mentions: 1
Published: over 13 years ago
10.1371/journal.pone.0093422
Microbial Community Functional Structures in Wastewater Treatment Plants as Characterized by GeoChipCited by: 40
Author(s): Xiaohui Wang, Yu Xia, Xianghua Wen, Yunfeng Yang, Jizhong Zhou
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0066184
Variations in Soil Microbial Communities and Residues Along an Altitude Gradient on the Northern Slope of Changbai Mountain, ChinaCited by: 67
Author(s): Bin Zhang, Chao Liang, Hongbo He, Xudong Zhang
Software Mentions: 1
Published: over 13 years ago
10.1371/journal.pone.0139371
The Impact of Conservation Management on the Community Composition of Multiple Organism Groups in Eutrophic Interconnected Man-Made PondsCited by: 9
Author(s): Pieter Lemmens, Joachim Mergeay, Jeroen Van Wichelen, Luc De Meester, Steven Declerck
Software Mentions: 1
Published: about 11 years ago
10.1371/journal.pone.0063375
Ecological Drivers of Biogeographic Patterns of Soil Archaeal CommunityCited by: 23
Author(s): Yuqi Zheng, Peng Cao, Bojie Fu, Jane Hughes, Ji‐Zheng He
Software Mentions: 1
Published: over 13 years ago
10.1371/journal.pone.0172160
The role of dispersal mode and habitat specialization for metacommunity structure of shallow beach invertebratesCited by: 19
Author(s): Iván F. Rodil, Paloma Lucena-Moya, Henri Jokinen, Victoria Marja Sofia Ollus, Håkan Wennhage, Anna Villnäs, Alf Norkko
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0226545
The microbiota composition of the offspring of patients with gestational diabetes mellitus (GDM)Cited by: 39
Author(s): Valentina Ponzo, Ilario Ferrocino, Adriana Zarovska, Maria Bernadette Amenta, Filomena Leone, C Monzeglio, Rosalba Rosato, Marianna Pellegrini, Roberto Gambino, Maurizio Cassader, Ezio Ghigo, Luca Simone Cocolin, Simona Bo
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pone.0104439
Trait-Specific Responses of Wild Bee Communities to Landscape Composition, Configuration and Local FactorsCited by: 86
Author(s): Sebastian Hopfenmüller, Ingolf Steffan‐Dewenter, Andrea Holzschuh
Software Mentions: 1
Published: about 12 years ago
10.1371/journal.pone.0142031
Urbanization Increases Pathogen Pressure on Feral and Managed Honey BeesCited by: 61
Author(s): Elsa Youngsteadt, R. Holden Appler, Margarita M. López‐Uribe, David R. Tarpy, Steven D. Frank
Software Mentions: 1
Published: almost 11 years ago
10.1371/journal.pone.0042238
Drosophila Regulate Yeast Density and Increase Yeast Community Similarity in a Natural SubstrateCited by: 112
Author(s): Judy A. Stamps, Louie H. Yang, Verónica L. Morales, Kyria Boundy‐Mills
Software Mentions: 1
Published: about 14 years ago
10.1371/journal.pone.0141510
The Paternal Landscape along the Bight of Benin – Testing Regional Representativeness of West-African Population Samples Using Y-Chromosomal MarkersCited by: 8
Author(s): Maarten Larmuseau, Andrea Vessi, Mark A. Jobling, Anneleen Van Geystelen, Giuseppina Primativo, G. Biondi, Cristina Martínez-Labarga, Claudio Ottoni, Ronny Decorte, Olga Rickards
Software Mentions: 1
Published: almost 11 years ago
10.1371/journal.pone.0080955
Coastal Fish Assemblages Reflect Geological and Oceanographic Gradients Within An Australian ZootoneCited by: 36
Author(s): Euan S. Harvey, Michael Cappo, Gary A. Kendrick, Dianne L. McLean
Software Mentions: 1
Published: almost 13 years ago