10.1038/srep09456

A pyrosequencing insight into sprawling bacterial diversity and community dynamics in decaying deadwood logs of Fagus sylvatica and Picea abies
Cited by: 86
Author(s): Björn Hoppe, Krüger Krger, Tiemo Kahl, Tobias Arnstadt, François Buscot, Jürgen Bauhus, Tesfaye Wubet
Software Mentions: 1
Published: over 11 years ago

10.3389/fmicb.2015.01114

Effects of sludge inoculum and organic feedstock on active microbial communities and methane yield during anaerobic digestion
Cited by: 34
Author(s): David E. Wilkins, Subramanya Rao, Xiaoying Lü, Patrick K. H. Lee
Software Mentions: 1
Published: about 11 years ago

10.3390/tropicalmed5040173

Microbiome Composition and Borrelia Detection in Ixodes scapularis Ticks at the Northwestern Edge of Their Range
Cited by: 11
Author(s): Janet L. H. Sperling, Daniel T. Fitzgerald, Felix A. H. Sperling, Katharine E. Magor
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2017.00945

Microbial Community and Functional Structure Significantly Varied among Distinct Types of Paddy Soils But Responded Differently along Gradients of Soil Depth Layers
Cited by: 61
Author(s): Ren Yuan Bai, Jun‐Tao Wang, Ye Deng, Ji‐Zheng He, Kai Feng, Limei Zhang
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0092578

The Systemic Inflammatory Response to Clostridium difficile Infection
Cited by: 53
Author(s): Krishna Rao, John R. Erb-Downward, Seth T. Walk, Dejan Micić, Nicole R. Falkowski, Kavitha Santhosh, Jill A. Mogle, Cathrin Ring, Vincent B. Young, Gary B. Huffnagle, David M. Aronoff
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0075396

Evaluating Ecosystem Services Provided by Non-Native Species: An Experimental Test in California Grasslands
Cited by: 13
Author(s): Cláudia Stein, Lauren M. Hallett, W. Stanley Harpole, Katharine N. Suding
Software Mentions: 1
Published: about 12 years ago

10.1038/s41598-017-00218-4

Daytime warming has stronger negative effects on soil nematodes than night-time warming
Cited by: 6
Author(s): Xiumin Yan, Kehong Wang, Liangcheng Song, Xuefeng Wang, Donghui Wu
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0184517

Improving the antiprotozoal effect of saponins in the rumen by combination with glycosidase inhibiting iminosugars or by modification of their chemical structure
Cited by: 13
Author(s): E. Ramos-Morales, Gabriel de la Fuente, Robert J. Nash, Radek Bragança, S. Duval, Marc E. Bouillon, Martina Lahmann, C. J. Newbold
Software Mentions: 1
Published: about 9 years ago

10.7717/peerj.7631

Differential mechanisms underlying responses of soil bacterial and fungal communities to nitrogen and phosphorus inputs in a subtropical forest
Cited by: 14
Author(s): Yong Li, Dashuan Tian, Jinsong Wang, Shuli Niu, Jing Tian, Denglong Ha, Yuxi Qu, Guangwei Jing, Xiaoming Kang, Bing Song
Software Mentions: 1
Published: about 7 years ago

10.1186/s12866-020-01754-2

The effects of daily fasting hours on shaping gut microbiota in mice
Cited by: 39
Author(s): Linghao Li, Yuxin Su, Fanglin Li, Yueying Wang, Zhiyong Ma, Zhuo Li, Junhong Su
Software Mentions: 1
Published: over 6 years ago

10.7717/peerj.8984

Farming by soil in Europe: status and outlook of cropping systems under different pedoclimatic conditions
Cited by: 1
Author(s): Gergely Tóth, Tamás Kismányoky, Piroska Kassai, Tamás Hermann, Oihane Fernández‐Ugalde, Brigitta Szabó
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2016.01893

Long-Term Application of Bioorganic Fertilizers Improved Soil Biochemical Properties and Microbial Communities of an Apple Orchard Soil
Cited by: 54
Author(s): Lei Wang, Fang Yang, E Yaoyao, Jun Yuan, Waseem Raza, Qiwei Huang, Qirong Shen
Software Mentions: 1
Published: almost 10 years ago

10.3389/fmicb.2020.00628

Early and Short-Term Interventions in the Gut Microbiota Affects Lupus Severity, Progression, and Treatment in MRL/lpr Mice
Cited by: 20
Author(s): Yun Zhang, Qiuping Liu, Yiran Yu, Mingzhu Wang, Chengping Wen, Zhixing He
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2016.01662

Bacterial Communities Associated with Four Cyanobacterial Genera Display Structural and Functional Differences: Evidence from an Experimental Approach
Cited by: 24
Author(s): Lin Zhu, Anouk Zancarini, Imen Louati, Silvia de Cesare, Clément Duval, Kevin Tambosco, Cécile Bernard, Didier Debroas, Lirong Song, Julie Leloup, Jean‐François Humbert
Software Mentions: 1
Published: about 10 years ago

10.1038/s41598-017-00472-6

Microbial community composition is related to soil biological and chemical properties and bacterial wilt outbreak
Cited by: 163
Author(s): Rui Wang, Hongchun Zhang, Liguang Sun, Gaofu Qi, Chen Shu, Xiuyun Zhao
Software Mentions: 1
Published: over 9 years ago

10.7717/peerj.9986

Soil fungal networks are more sensitive to grazing exclusion than bacterial networks
Cited by: 5
Author(s): Lingling Chen, Jiajia Shi, Zhihua Bao, Taogetao Baoyin
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-017-01298-y

Exploration of the relationship between biogas production and microbial community under high salinity conditions
Cited by: 61
Author(s): Shaojie Wang, Xiaocong Hou, Haijia Su
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0248216

Sampling efficiency of a protocol to measure Odonata diversity in tropical streams
Cited by: 8
Author(s): Joana Darc Batista, Victor Rennan Santos Ferreira, Helena Soares Ramos Cabette, Lourivaldo Amâncio de Castro, Paulo de Marco Júnior, Leandro Juen
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.7356

Variation in denitrifying bacterial communities along a primary succession in the Hailuogou Glacier retreat area, China
Cited by: 7
Author(s): Yan Bai, Xiying Huang, Xiangrui Zhou, Quanju Xiang, Ke Zhao, Xiumei Yu, Qiang Chen, Hao Jiang, Nyima Tashi, Xue Gao, Yunfu Gu
Software Mentions: 1
Published: about 7 years ago

10.1038/s41598-017-01312-3

The diet of a nocturnal pelagic predator, the Bulwer’s petrel, across the lunar cycle
Cited by: 23
Author(s): Silke Waap, William Oliver Christian Symondson, José Pedro Granadeiro, Hany Alonso, Catarina Serra-Gonçalves, Maria P. Dias, Paulo Catry
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2018.02565

The Effect of Captivity on the Dynamics of Active Bacterial Communities Differs Between Two Deep-Sea Coral Species
Cited by: 18
Author(s): Pierre E. Galand, Leïla Chapron, Anne-Leïla Meistertzheim, Erwan Péru, Franck Lartaud
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2019.00063

Assessment of the Diversity of Fungal Community Composition Associated With Vachellia pachyceras and Its Rhizosphere Soil From Kuwait Desert
Cited by: 21
Author(s): M. K. Suleiman, Kingsley W. Dixon, Lucy Commander, Paul Nevill, Ali M. Quoreshi, N. R. Bhat, Anitha J. Manuvel, Mini T. Sivadasan
Software Mentions: 1
Published: over 7 years ago

10.7717/peerj.4575

Oligotrophic wetland sediments susceptible to shifts in microbiomes and mercury cycling with dissolved organic matter addition
Cited by: 10
Author(s): Emily B. Graham, R. S. Gabor, Shon Schooler, Diane M. McKnight, Diana R. Nemergut, Joseph E. Knelman
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-017-00550-9

Habitat connectivity and in-stream vegetation control temporal variability of benthic invertebrate communities
Cited by: 21
Author(s): Kaisa‐Leena Huttunen, Heikki Mykrä, Jari Oksanen, Anna Astorga, Riku Paavola, Timo Muotka
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-020-71024-8

Comparative analysis of rhizosphere soil physiochemical characteristics and microbial communities between rusty and healthy ginseng root
Cited by: 35
Author(s): Xingbo Bian, Xiao Shuhua, Yan Zhao, Yanfang Xu, Yang He, Lianxue Zhang
Software Mentions: 1
Published: about 6 years ago

10.7717/peerj.9117

Characteristics of the soil microbial community in the forestland of <i>Camellia oleifera</i>
Cited by: 15
Author(s): Peng Zhang, Zhiyi Cui, Mengqing Guo, Ruchun Xi
Software Mentions: 1
Published: over 6 years ago

10.1038/s42003-018-0274-5

Biotic interactions are an unexpected yet critical control on the complexity of an abiotically driven polar ecosystem
Cited by: 40
Author(s): Charles K. Lee, Daniel C. Laughlin, Eric Bottos, Tancredi Caruso, Kurt Joy, John E. Barrett, Lars Brabyn, Uffe N. Nielsen, Byron J. Adams, Diana H. Wall, D. W. Hopkins, Stephen B. Pointing, Ian R. McDonald, Don A. Cowan, Jonathan C. Banks, Glen Stichbury, Irfon Jones, Peyman Zawar-Reza, Marwan Katurji, Ian D. Hogg, Ashley D. Sparrow, B. C. Storey, T.G. Allan Green, S. Craig Cary
Software Mentions: 1
Published: over 7 years ago

10.1038/s42003-018-0221-5

Pre-obese children’s dysbiotic gut microbiome and unhealthy diets may predict the development of obesity
Cited by: 61
Author(s): Simone Rampelli, Kathrin Guenther, Silvia Turroni, Maike Wolters, Toomas Veidebaum, Yiannis Kourides, Dénes Molnár, Lauren Lissner, Alfonso Benı́tez-Páez, Yolanda Sanz, Arno Fraterman, Nathalie Michels, Patrizia Brigidi, Marco Candela, Wolfgang Ahrens
Software Mentions: 1
Published: almost 8 years ago

10.1002/ece3.2606

Co‐occurrence patterns in a diverse arboreal ant community are explained more by competition than habitat requirements
Cited by: 47
Author(s): Flávio Camarota, Scott Powell, Adriano S. Melo, Galen V. Priest, Robert J. Marquis, Heraldo L. Vasconcelos
Software Mentions: 1
Published: almost 10 years ago

10.1038/s41598-017-03248-0

Land use alters arbuscular mycorrhizal fungal communities and their potential role in carbon sequestration on the Tibetan Plateau
Cited by: 34
Author(s): Xu Meng, Xiaoliang Li, Xiaobu Cai, Xin Li, Peter Christie, Junling Zhang
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-017-03539-6

Consistent effects of nitrogen fertilization on soil bacterial communities in black soils for two crop seasons in China
Cited by: 84
Author(s): Jing Zhou, Xin Jiang, Dan Wei, Baisuo Zhao, Mingchao Ma, Sanfeng Chen, Fengming Cao, Dejian Shen, Dawei Guan, Jun Li
Software Mentions: 1
Published: over 9 years ago

10.7717/peerj.6738

Examining the assumptions of heterogeneity-based management for promoting plant diversity in a disturbance-prone ecosystem
Cited by: 0
Author(s): Daniel J. McGlinn, Michael W. Palmer
Software Mentions: 1
Published: over 7 years ago

10.1128/mSystems.00475-20

Plant and Soil Development Cooperatively Shaped the Composition of the <i>phoD</i> -Harboring Bacterial Community along the Primary Succession in the Hailuogou Glacier Chronosequence
Cited by: 9
Author(s): Yan Bai, Quanju Xiang, Ke Zhao, Xiumei Yu, Qiang Chen, Menggen Ma, Hao Jiang, Xiaoping Zhu, Petri Penttinen, Yunfu Gu
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0128583

Recovering More than Tree Cover: Herbivores and Herbivory in a Restored Tropical Dry Forest
Cited by: 22
Author(s): Iris Juan-Baeza, Cristina Martínez‐Garza, Ek del‐Val
Software Mentions: 1
Published: over 11 years ago

10.7717/peerj.5166

Minimizing confounders and increasing data quality in murine models for studies of the gut microbiome
Cited by: 43
Author(s): Jun Miyoshi, Vanessa Leone, Kentaro Nobutani, Mark W. Musch, Kristina Martinez, Yunwei Wang, Sawako Miyoshi, Alexandria M. Bobe, A. Murat Eren, Eugene B. Chang
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0211718

Genetic dissection of agronomic and quality traits based on association mapping and genomic selection approaches in durum wheat grown in Southern Spain
Cited by: 25
Author(s): Rosa Mérida-García, Guozheng Liu, Sang He, Victoria González-Dugo, Gabriel Dorado, Sergio Gálvez, Ignacio Solís, Pablo J. Zarco‐Tejada, Jochen C. Reif, Pilar Hernández
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0198087

Effects of straw return on bacterial communities in a wheat-maize rotation system in the North China Plain
Cited by: 22
Author(s): Dali Yu, Zhiguo Wen, Xiumei Li, Xiaojun Song, Huijun Wu, Peilong Yang
Software Mentions: 1
Published: over 8 years ago

10.1186/s12936-019-2742-x

Species abundance, composition, and nocturnal activity of female Anopheles (Diptera: Culicidae) in malaria-endemic villages of Papua New Guinea: assessment with barrier screen sampling
Cited by: 11
Author(s): John B. Keven, Michelle Katusele, Rebecca Vinit, Gussy Koimbu, Naomi Vincent, Edward Thomsen, Stephan Karl, Lisa J. Reimer, Edward D. Walker
Software Mentions: 1
Published: over 7 years ago

10.1016/j.csbj.2019.05.003

A Rhizosphere-Derived Consortium of Bacillus subtilis and Trichoderma harzianum Suppresses Common Scab of Potato and Increases Yield
Cited by: 54
Author(s): Zhenshuo Wang, Yan Li, Lubo Zhuang, Yue Yu, Jia Liu, Lixia Zhang, Zhen-Jiang Gao, Yufeng Wu, Wa Gao, Guo-Chun Ding, Qi Wang
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0056329

Bacterial Communities Associated with the Leaves and the Roots of Arabidopsis thaliana
Cited by: 588
Author(s): Natacha Bodenhausen, Matthew Horton, Joy Bergelson
Software Mentions: 1
Published: over 13 years ago

10.1038/s41598-017-05076-8

Honeybee (Apis mellifera)-associated bacterial community affected by American foulbrood: detection of Paenibacillus larvae via microbiome analysis
Cited by: 53
Author(s): Tomáš Erban, Ondřej Ledvinka, Martin Kamler, Marta Nešvorná, Bronislava Hortová, Jan Tyl, Dalibor Titěra, Martin Markovic, Jan Hubert
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2180-12-56

BactQuant: An enhanced broad-coverage bacterial quantitative real-time PCR assay
Cited by: 149
Author(s): Cindy M. Liu, Maliha Aziz, Sergey Kachur, Po Ren Hsueh, Yu-Tsung Huang, Paul Keim, Lance B. Price
Software Mentions: 1
Published: over 14 years ago

10.1038/s41598-017-05114-5

Plant recording across two centuries reveals dramatic changes in species diversity of a Mediterranean archipelago
Cited by: 35
Author(s): Alessandro Chiarucci, Simone Fattorini, Bruno Foggi, Sara Landi, Lorenzo Lazzaro, János Podani, Daniel Simberloff
Software Mentions: 1
Published: over 9 years ago

10.7717/peerj.6967

High resistance to climatic variability in a dominant tundra shrub species
Cited by: 5
Author(s): Victoria T. González, Mikel Moriana-Armendariz, Snorre B. Hagen, Bente Lindgård, Rigmor Reiersen, Kari Anne Bråthen
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-05879-9

Assessment of the occurrence, spatiotemporal variations and geoaccumulation of fifty-two inorganic elements in sewage sludge: A sludge management revisit
Cited by: 16
Author(s): Fidèle Suanon, Qian Sun, Xiaoyang Yang, Qiaoqiao Chi, Sikandar I. Mulla, Daouda Mama, Chang‐Ping Yu
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2018.00634

Urea Amendment Decreases Microbial Diversity and Selects for Specific Nitrifying Strains in Eight Contrasting Agricultural Soils
Cited by: 33
Author(s): Christopher Staley, Florence Breuillin‐Sessoms, Ping Wang, Thomas Kaiser, Rodney T. Venterea, Michael J. Sadowsky
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-017-05958-x

Rapid Response of Eastern Mediterranean Deep Sea Microbial Communities to Oil
Cited by: 18
Author(s): Jiang Liu, Stephen M. Techtmann, Hyun-Joo Woo, Daliang Ning, Julian L. Fortney, Terry C. Hazen
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2020.565806

Bacterial Community Characteristics and Enzyme Activities in Bothriochloa ischaemum Litter Over Progressive Phytoremediation Years in a Copper Tailings Dam
Cited by: 10
Author(s): Tong Jia, Yuwen Wang, Bo Chai
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2017.00702

Relative Importance of Chemoautotrophy for Primary Production in a Light Exposed Marine Shallow Hydrothermal System
Cited by: 20
Author(s): Gonzalo V. Gomez‐Saez, Petra Pop Ristova, Stefan M. Sievert, Marcus Elvert, Kai‐Uwe Hinrichs, Solveig I Bühring
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-017-06436-0

Effect of inoculation of Burkholderia sp. strain SJ98 on bacterial community dynamics and para-nitrophenol, 3-methyl-4-nitrophenol, and 2-chloro-4-nitrophenol degradation in soil
Cited by: 28
Author(s): Jin‐Young Min, Bin Wang, Xiaoke Hu
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-017-06693-z

Advantages of phylogenetic distance based constrained ordination analyses for the examination of microbial communities
Cited by: 30
Author(s): Vijay Shankar, Richard Agans, Oleg Paliy
Software Mentions: 1
Published: over 9 years ago

10.7717/peerj.2687

Proteogenomic analyses indicate bacterial methylotrophy and archaeal heterotrophy are prevalent below the grass root zone
Cited by: 97
Author(s): Cristina N. Butterfield, Zhou Li, Peter F. Andeer, Susan E. Spaulding, Brian C. Thomas, Anil K. Singh, Robert L. Hettich, K. Blake Suttle, Alexander J. Probst, Susannah G. Tringe, Trent Northen, Chongle Pan, Jillian F. Banfield
Software Mentions: 1
Published: almost 10 years ago

10.3390/ani11010233

Is Intestinal Bacterial Diversity Enhanced by Trans-Species Spread in the Mixed-Species Flock of Hooded Crane (Grus monacha) and Bean Goose (Anser fabalis) Wintering in the Lower and Middle Yangtze River Floodplain?
Cited by: 6
Author(s): Zhuqing Yang, Lizhi Zhou
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-017-07196-7

Aggravation of collagen-induced arthritis by orally administered Porphyromonas gingivalis through modulation of the gut microbiota and gut immune system
Cited by: 132
Author(s): Keisuke Sato, Naoki Takahashi, Tamotsu Kato, Yukio Matsuda, Mai Yokoji, Miki Yamada, Takako Eguchi Nakajima, Naoki Kondo, Naoto Endo, Reiko Yamamoto, Yuichiro Noiri, Hiroshi Ohno, Kazuhisa Yamazaki
Software Mentions: 1
Published: about 9 years ago

10.1002/ece3.5967

Legacy forest structure increases bird diversity and abundance in aging young forests
Cited by: 11
Author(s): Juliana Hanle, Marlyse C. Duguid, Mark S. Ashton
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-017-08790-5

Milk microbiome and bacterial load following dry cow therapy without antibiotics in dairy cows with healthy mammary gland
Cited by: 61
Author(s): Erika Carolina Romão Bonsaglia, Marilia S. Gomes, Igor F. Canisso, Ziyao Zhou, Svetlana Lima, Vera Lúcia Mores Rall, Georgios Oikonomou, R.C. Bicalho, F.S. Lima
Software Mentions: 1
Published: about 9 years ago

10.1093/conphys/coz023

OUP accepted manuscript
Cited by: 3
Author(s): William M. Twardek, Jacqueline M. Chapman, Kristina M. Miller, Mark Beere, S Li, Karia H. Kaukinen, Andy J. Danylchuk, Steven J. Cooke
Software Mentions: 1
Published: almost 8 years ago

10.7717/peerj.2174

Metabolomics of pulmonary exacerbations reveals the personalized nature of cystic fibrosis disease
Cited by: 44
Author(s): Robert A. Quinn, Yan Wei Lim, Tytus D. Mak, Katrine Whiteson, Mike Furlan, Douglas Conrad, Forest Rohwer, Pieter C. Dorrestein
Software Mentions: 1
Published: about 10 years ago

10.3390/life11080852

Spatial and Species Variations of Bacterial Community Structure and Putative Function in Seagrass Rhizosphere Sediment
Cited by: 3
Author(s): Juan Ling, Wan Zhou, Qingsong Yang, Jingdong Yin, Jian Zhang, Qiuying Peng, Xiaofang Huang, Yuhang Zhang, Jinyun Dong
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.9047

The chemistry and histology of sexually dimorphic mental glands in the freshwater turtle,<i>Mauremys leprosa</i>
Cited by: 1
Author(s): Alejandro Ibáñez, Albert Martı́nez Silvestre, Dagmara Podkowa, Aneta Woźniakiewicz, Michał Woźniakiewicz, Maciej Pabijan
Software Mentions: 1
Published: over 6 years ago

10.7717/peerj.8536

Short-term effects of thinning on the development and communities of understory vegetation of Chinese fir plantations in Southeastern China
Cited by: 10
Author(s): Xuelei Xu, Xinjie Wang, Huifen Yang, Ping Wang, Sajjad Saeed, Yong Sun
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2018.00797

Bacterial Diversity and Nitrogen Utilization Strategies in the Upper Layer of the Northwestern Pacific Ocean
Cited by: 33
Author(s): Yuanyuan Li, Xiao-Huang Chen, Zhang-Xian Xie, Dongxu Li, Pengfei Wu, Ling-Fen Kong, Lin Lin, Shuh‐Ji Kao, Dazhi Wang
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-017-08679-3

Bacterial diversity among four healthcare-associated institutes in Taiwan
Cited by: 17
Author(s): Changhua Chen, Yaw-Ling Lin, Kuan-Hsueh Chen, Wen-Pei Chen, Chen Zhao-feng, Han-Yueh Kuo, Hsueh-Fen Hung, Chuan Yi Tang, Ming-Li Liou
Software Mentions: 1
Published: about 9 years ago

10.7717/peerj.3360

Storm effects on intertidal invertebrates: increased beta diversity of few individuals and species
Cited by: 43
Author(s): Guilherme Nascimento Corte, Thomas A. Schlacher, Hélio H. Checon, Carlos A. M. Barboza, Eduardo Siegle, Ross A. Coleman, A. Cecília Z. Amaral
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-017-08575-w

Influence of film mulching on soil microbial community in a rainfed region of northeastern China
Cited by: 49
Author(s): Wenyi Dong, Peng Si, Enke Liu, Changrong Yan, Zhe Zhang, Yanqing Zhang
Software Mentions: 1
Published: about 9 years ago

10.7717/peerj.6610

Associated bacteria of <i>Botryococcus braunii</i> (Chlorophyta)
Cited by: 7
Author(s): João Diogo Gouveia, Jie Lian, Georg Steinert, Hauke Smidt, Detmer Sipkema, René H. Wijffels, María J. Barbosa
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-08732-1

Stability in metabolic phenotypes and inferred metagenome profiles before the onset of colitis-induced inflammation
Cited by: 10
Author(s): Maria Glymenaki, Alan Barnes, Steve O’Hagan, Geoffrey Warhurst, Andrew J. McBain, Ian D. Wilson, Douglas B. Kell, Kathryn J. Else, Sheena M. Cruickshank
Software Mentions: 1
Published: about 9 years ago

10.3390/pathogens6040054

Opportunistic Pathogens and Microbial Communities and Their Associations with Sediment Physical Parameters in Drinking Water Storage Tank Sediments
Cited by: 22
Author(s): Ke Qin, Ian Struewing, Jorge Santo Domingo, Darren A. Lytle, Jingrang Lu
Software Mentions: 1
Published: about 9 years ago

10.1155/2016/8232135

The Vertical Distribution of Sediment Archaeal Community in the “Black Bloom” Disturbing Zhushan Bay of Lake Taihu
Cited by: 29
Author(s): Xianfang Fan, Peng Xing
Software Mentions: 1
Published: almost 11 years ago

10.3390/antibiotics9030120

Antibiotic Resistance Genes in Antibiotic-Free Chicken Farms
Cited by: 12
Author(s): Yuhong Liu, Mike Dyall‐Smith, Marc S. Marenda, Hang‐Wei Hu, Glenn F. Browning, Helen Billman‐Jacobe
Software Mentions: 1
Published: over 6 years ago

10.3390/life10070107

Assessing Viral Abundance and Community Composition in Four Contrasting Regions of the Southern Ocean
Cited by: 9
Author(s): Ana Sotomayor-García, M. Montserrat Sala, Isabel Ferrera, Marta Estrada, Evaristo Vázquez-Domı́nguez, Mikhail Emelianov, Pau Cortés, Cèlia Marrasé, Eva Ortega−Retuerta, Sdena Nunes, Yaiza Castillo, María Serrano Cuerva, Marta Sebastián, Manuel Dall’Osto, Rafel Simó, Dolors Vaqué
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-017-07790-9

The vaginal microbiome of pregnant women is less rich and diverse, with lower prevalence of Mollicutes, compared to non-pregnant women
Cited by: 123
Author(s): Aline C. Freitas, Bonnie Chaban, Alan D. Bocking, Maria Thereza Fraga Rocco, Siwen Yang, Janet E. Hill, Deborah Money, Sean M. Hemmingsen, Gregor Reid, Tim J. Dumonceaux, Gregory B. Gloor, Matthew G. Links, Kieran C. O’Doherty, Patrick Tang, Julianne van Schalkwyk, Mark H. Yudin
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-017-09768-z

Alien plant invasions of protected areas in Java, Indonesia
Cited by: 15
Author(s): Michael Padmanaba, Kyle W. Tomlinson, Alice C. Hughes
Software Mentions: 1
Published: about 9 years ago

10.1186/s12933-021-01333-3

Elevated plasma succinate levels are linked to higher cardiovascular disease risk factors in young adults
Cited by: 24
Author(s): Francisco J. Osuna‐Prieto, Borja Martínez-Téllez, Lourdes Ortiz-Alvarez, Xinyu Di, Lucas Jurado‐Fasoli, Huiwen Xu, Victòria Ceperuelo-Mallafré, Catalina Núñez‐Roa, Isabelle Köhler, Antonio Segura‐Carretero, José Vicente Garcı́a-Lario, Ángel Gil, Concepción M. Aguilera, J.M. Llamas Elvira, Patrick C.N. Rensen, Joan Vendrell, Jonatan R. Ruiz, Sonia Fernández‐Veledo
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2018.00185

Soil Bacterial Community Was Changed after Brassicaceous Seed Meal Application for Suppression of Fusarium Wilt on Pepper
Cited by: 17
Author(s): Guohao Ren, Yan Ma, Dali Guo, Terry J. Gentry, Ping Hu, Elizabeth A. Pierson, Mengmeng Gu
Software Mentions: 1
Published: over 8 years ago

10.1186/s12866-015-0477-6

Having older siblings is associated with gut microbiota development during early childhood
Cited by: 92
Author(s): Martin Frederik Laursen, Gitte Zachariassen, Martin Iain Bahl, Anders Bergström, Arne Høst, Kim F. Michaelsen, Tine Rask Licht
Software Mentions: 1
Published: about 11 years ago

10.1186/s12866-020-02080-3

Comparison of rectal swab, glove tip, and participant-collected stool techniques for gut microbiome sampling
Cited by: 13
Author(s): Meghan I. Short, Robert Hudson, Benjamin D. Besasie, Kelly R. Reveles, Dimpy P. Shah, Susannah E. Nicholson, Teresa L. Johnson‐Pais, Korri Weldon, Zhao Lai, Robin J. Leach, Bernard Fongang, Michael A. Liss
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2017.00976

The Biogeographic Pattern of Microbial Functional Genes along an Altitudinal Gradient of the Tibetan Pasture
Cited by: 22
Author(s): Qi Qi, Mengxin Zhao, Shiping Wang, Xingyu Ma, Yuxuan Wang, Ying Gao, Qiaoyan Lin, Xiangzhen Li, Baohua Gu, Guoxue Li, Jizhong Zhou, Yunfeng Yang
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2018.00171

Ammonia-Oxidizing Archaea Show More Distinct Biogeographic Distribution Patterns than Ammonia-Oxidizing Bacteria across the Black Soil Zone of Northeast China
Cited by: 31
Author(s): Junjie Liu, Zhenhua Yu, Qin Yao, Yueyu Sui, Yu Shi, Haiyan Chu, Caixian Tang, Ashley E. Franks, Jian Jin, Xiaobing Liu
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0015685

Forest Plant and Bird Communities in the Lau Group, Fiji
Cited by: 15
Author(s): Janet Franklin, David W. Steadman
Software Mentions: 1
Published: almost 16 years ago

10.1186/s13071-016-1299-6

Culex pipiens and Culex restuans mosquitoes harbor distinct microbiota dominated by few bacterial taxa
Cited by: 75
Author(s): Ephantus J. Muturi, Chang‐Hyun Kim, Jeffrey J. Bara, Elizabeth M. Bach, Madhura H. Siddappaji
Software Mentions: 1
Published: almost 11 years ago

10.3389/fmicb.2019.00248

Seasonality of Planktonic Freshwater Ciliates: Are Analyses Based on V9 Regions of the 18S rRNA Gene Correlated With Morphospecies Counts?
Cited by: 42
Author(s): Gianna Pitsch, Estelle P. Bruni, Dominik Forster, Zhishuai Qu, Bettina Sonntag, Thorsten Stoeck, Thomas Posch
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-020-70695-7

Responses of active soil microorganisms facing to a soil biostimulant input compared to plant legacy effects
Cited by: 20
Author(s): Eve Hellequin, Cécile Monard, Marion Chorin, Nathalie Le Bris, Virginie Daburon, Olivier Klarzynski, Françoise Binet
Software Mentions: 1
Published: about 6 years ago

10.1186/s13071-015-0907-1

Distribution and diversity of the vectors of Rift Valley fever along the livestock movement routes in the northeastern and coastal regions of Kenya
Cited by: 21
Author(s): Samwel O. Arum, Christopher W. Weldon, Benedict Orindi, Tobias Landmann, David P. Tchouassi, Hippolyte Affognon, Rosemary Sang
Software Mentions: 1
Published: over 11 years ago

10.1038/s41598-017-08757-6

Inference on Paleoclimate Change Using Microbial Habitat Preference in Arctic Holocene Sediments
Cited by: 7
Author(s): Dukki Han, Seung‐Il Nam, Ji Hoon Kim, Rüdiger Stein, Frank Niessen, Young Jin Joe, Yu-Hyeon Park, Hor‐Gil Hur
Software Mentions: 1
Published: about 9 years ago

10.1038/s41396-020-0604-8

Double-stranded DNA virioplankton dynamics and reproductive strategies in the oligotrophic open ocean water column
Cited by: 61
Author(s): Elaine Luo, John M. Eppley, Anna E. Romano, Daniel R. Mende, Edward F. DeLong
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-017-09748-3

Conservation priorities for endangered Indian tigers through a genomic lens
Cited by: 32
Author(s): Meghana Natesh, Goutham Atla, Parag Nigam, Yadvendradev V. Jhala, Arun Zachariah, Udayan Borthakur, Uma Ramakrishnan
Software Mentions: 1
Published: about 9 years ago

10.3389/fmicb.2016.01840

Impacts of Fertilization Regimes on Arbuscular Mycorrhizal Fungal (AMF) Community Composition Were Correlated with Organic Matter Composition in Maize Rhizosphere Soil
Cited by: 55
Author(s): Chen Zhu, Ning Ling, Junjie Guo, Min Wang, Shiwei Guo
Software Mentions: 1
Published: almost 10 years ago

10.1186/s13071-020-04550-z

The bacterial community of the lone star tick (Amblyomma americanum)
Cited by: 20
Author(s): L. Paulina Maldonado-Ruiz, Saraswoti Neupane, Yoonseong Park, Ludek Zurek
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0074136

Increasing Seriousness of Plant Invasions in Croplands of Eastern China in Relation to Changing Farming Practices: A Case Study
Cited by: 8
Author(s): Guoqi Chen, HE Yun-he, Sheng Qiang
Software Mentions: 1
Published: about 13 years ago

10.3389/fmicb.2020.01333

Ridge Tillage Improves Soil Properties, Sustains Diazotrophic Communities, and Enhances Extensively Cooperative Interactions Among Diazotrophs in a Clay Loam Soil
Cited by: 8
Author(s): Xiaojing Hu, Aizhen Liang, Qin Yao, Zhuxiu Liu, Zhenhua Yu, Guanghua Wang
Software Mentions: 1
Published: over 6 years ago

10.1186/s13071-017-1999-6

Avian species diversity and transmission of West Nile virus in Atlanta, Georgia
Cited by: 30
Author(s): Rebecca S. Levine, David L. Hedeen, Meghan W. Hedeen, Gabriel L. Hamer, Daniel G. Mead, Uriel Kitron
Software Mentions: 1
Published: over 9 years ago

10.1002/ece3.4293

Spatial scale‐dependent phylogenetic signal in species distributions along geographic and elevation gradients in a mountainous rangeland
Cited by: 15
Author(s): Maral Pashirzad, Hamid Ejtehadi, Jamil Vaezi, Richard P. Shefferson
Software Mentions: 1
Published: about 8 years ago

10.1155/2020/8888615

Response and Adaptation of Microbial Community in a CANON Reactor Exposed to an Extreme Alkaline Shock
Cited by: 8
Author(s): Ruili Yang, Wenlong Mao, Xiaojun Wang, Zhaoji Zhang, Jianrong Wu, Shaohua Chen
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-017-10608-3

Shift of bacterial community structure along different coastal reclamation histories in Jiangsu, Eastern China
Cited by: 23
Author(s): Jianfeng Hua, Youzhi Feng, Qian Jiang, Bao Xue-wen, Yue Yin
Software Mentions: 1
Published: about 9 years ago

10.1186/s13071-016-1466-9

The influence of life history characteristics on flea (Siphonaptera) species distribution models
Cited by: 12
Author(s): Luther van der Mescht, Peter C. le Roux, Conrad A. Matthee, Morgan Jade Raath, Sonja Matthee
Software Mentions: 1
Published: over 10 years ago

10.1128/mSystems.00313-20

The Gut Microbiota-Produced Indole-3-Propionic Acid Confers the Antihyperlipidemic Effect of Mulberry-Derived 1-Deoxynojirimycin
Cited by: 29
Author(s): Yougui Li, Wei Xu, Fang Zhang, Zhong Su, Yan Sun, Jinxi Huo, Jianxun Zhu, Chongming Wu
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2020.00314

Microbial Community, Newly Sequestered Soil Organic Carbon, and δ15N Variations Driven by Tree Roots
Cited by: 17
Author(s): Wenchen Song, Xiaochong Tong, Yanhong Liu, LI Wei-ke
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0067726

Disentangling the Spatio-Environmental Drivers of Human Settlement: An Eigenvector Based Variation Decomposition
Cited by: 8
Author(s): Ralf Vandam, Eva Kaptijn, Bram Vanschoenwinkel
Software Mentions: 1
Published: over 13 years ago

10.1186/s13071-018-2792-x

Community analysis of the abundance and diversity of biting midge species (Diptera: Ceratopogonidae) in three European countries at different latitudes
Cited by: 11
Author(s): Tim W. R. Möhlmann, Uno Wennergren, Malin Tälle, Guido Favia, Claudia Damiani, Luca Bracchetti, Willem Takken, Constantianus J. M. Koenraadt
Software Mentions: 1
Published: over 8 years ago