Projects: cran: vegan

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/vegan

Community Ecology Package
87 versions
Latest release: almost 4 years ago
202 dependent packages
91,351 downloads last month

Enhanced Analysis
Educational Contributors: ghanni@upenn.edu pminchi@siue.edu hezibuba@mail.tau.ac.il
Repository Activity:
Repository Owner: vegandevs (organization)
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +60 Educational commit emails
    3 contributors with educational email addresses
  • +2 Science terms in README
    1 scientific terms found in README
Penalties:
  • -15 No science keywords
    No scientific terms found in keywords/classifiers

Very Likely Science (100)

Papers Mentioning vegan 6,903

10.1038/s41598-021-82060-3
Effects of integrated biocontrol on bacterial wilt and rhizosphere bacterial community of tobacco
Cited by: 18
Author(s): Yun Hu, Yanyan Li, Xiaomin Yang, Chunli Li, Lin Wang, Jia‐Xun Feng, Shouwen Chen, Xihong Li, Yong Yang
Software Mentions: 1
Published: over 5 years ago
10.1155/2013/849346
Association between Neurocognitive Impairment and the Short Allele of the 5-HTT Promoter Polymorphism in Depression: A Pilot Study
Cited by: 7
Author(s): Hely Kalska, Ullamari Pesonen, Sanna Lehikoinen, Jan-Henry Stenberg, Jari Lipsanen, Jussi Niemi-Pynttäri, Arja Tuunainen
Software Mentions: 1
Published: over 13 years ago
10.1371/journal.pone.0164108
Mycorrhizal Fungal Diversity and Community Composition in Two Closely Related Platanthera (Orchidaceae) Species
Cited by: 25
Author(s): Fabiana Esposito, Hans Jacquemyn, Michael Waud, Daniel Tyteca
Software Mentions: 1
Published: almost 10 years ago
10.1371/journal.pone.0199810
Enhanced preservation of the human intestinal microbiota by ridinilazole, a novel Clostridium difficile-targeting antibacterial, compared to vancomycin
Cited by: 41
Author(s): Cheleste M. Thorpe, Anne Kane, Julia Yu Fong Chang, Albert Tai, Richard Vickers, David R. Snydman
Software Mentions: 1
Published: about 8 years ago
10.3389/fmicb.2019.00159
Elevated Gut Microbiome-Derived Propionate Levels Are Associated With Reduced Sterile Lung Inflammation and Bacterial Immunity in Mice
Cited by: 45
Author(s): Xiaoli Tian, Judith Hellman, Alexander R. Horswill, Heidi A. Crosby, Kevin P. Francis, Arun Prakash
Software Mentions: 1
Published: over 7 years ago
10.1098/rsos.150531
Trophic niche divergence among colour morphs that exhibit alternative mating tactics
Cited by: 28
Author(s): Matthew S. Lattanzio, Donald B. Miles
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0162098
Temperature Regimes Impact Coral Assemblages along Environmental Gradients on Lagoonal Reefs in Belize
Cited by: 23
Author(s): Justin H. Baumann, Joseph E. Townsend, Travis A. Courtney, Hannah E. Aichelman, Sarah W. Davies, Fernando P. Lima, Karl D. Castillo
Software Mentions: 1
Published: about 10 years ago
10.1002/ece3.5868
Generalized host‐plant feeding can hide sterol‐specialized foraging behaviors in bee–plant interactions
Cited by: 12
Author(s): Maryse Vanderplanck, Pierre-Laurent Zerck, Georges Lognay, Denis Michez
Software Mentions: 1
Published: almost 7 years ago
10.3390/ijms20092125
Changes in the Soil Microbiome in Eggplant Monoculture Revealed by High-Throughput Illumina MiSeq Sequencing as Influenced by Raw Garlic Stalk Amendment
Cited by: 13
Author(s): Muhammad Imran Ghani, Ahmad Ali, Muhammad Atif, Muhammad Ali, Bakht Amin, Muhammad Anees, Haris Khurshid, Zhihui Cheng
Software Mentions: 1
Published: over 7 years ago
10.1002/ece3.3191
Interactions among salt marsh plants vary geographically but not latitudinally along the California coast
Cited by: 5
Author(s): Akana E. Noto, Jonathan B. Shurin
Software Mentions: 1
Published: about 9 years ago
10.1007/s00572-018-0859-3
A pulse of summer precipitation after the dry season triggers changes in ectomycorrhizal formation, diversity, and community composition in a Mediterranean forest in California, USA
Cited by: 22
Author(s): Takeshi Taniguchi, Kuni Kitajima, Greg W. Douhan, Norikazu Yamanaka, Michael F. Allen
Software Mentions: 1
Published: about 8 years ago
10.1371/journal.pone.0168206
Structural Changes in Molluscan Community over a 15-Year Period before and after the 2011 Great East Japan Earthquake and Subsequent Tsunami around Matsushima Bay, Miyagi Prefecture, Northeastern Japan
Cited by: 10
Author(s): Shinichi Sato, Tomoki Chiba
Software Mentions: 1
Published: almost 10 years ago
10.1371/journal.pone.0136793
Invertebrate Metacommunity Structure and Dynamics in an Andean Glacial Stream Network Facing Climate Change
Cited by: 65
Author(s): Sophie Cauvy‐Fraunié, Rodrigo Espinosa, Patricio Andino, Dean Jacobsen, Olivier Dangles
Software Mentions: 1
Published: about 11 years ago
10.1051/parasite/2018054
Metazoan parasite communities of two deep-sea elasmobranchs: the southern lanternshark, <i>Etmopterus granulosus</i>, and the largenose catshark, <i>Apristurus nasutus</i>, in the Southeastern Pacific Ocean
Cited by: 9
Author(s): Juan F. Espínola‐Novelo, Rubén Escribano, Marcelo E. Oliva
Software Mentions: 1
Published: over 8 years ago
10.3390/ijerph16071111
Mapping the Evolution of Mercury (Hg) Research in the Amazon (1991–2017): A Scientometric Analysis
Cited by: 7
Author(s): Lilian de Castro Moraes Pinto, José G. Dórea, José Vicente Elias Bernardi, Leonardo Fernandes Gomes
Software Mentions: 1
Published: over 7 years ago
10.3390/ijerph17103516
Interaction between Fungal Communities, Soil Properties, and the Survival of Invading E. coli O157:H7 in Soils
Cited by: 9
Author(s): Guannan Huang, Jiafen Liao, Ziming Han, Jiahang Li, Liyue Zhu, Guangze Lyu, Lu Lu, Yuang Xie, Jincai Ma
Software Mentions: 1
Published: over 6 years ago
10.3389/fmicb.2017.01912
Patterns and Processes in Marine Microeukaryotic Community Biogeography from Xiamen Coastal Waters and Intertidal Sediments, Southeast China
Cited by: 91
Author(s): Weidong Chen, Yongbo Pan, Lingyu Yu, Jun Yang, Wenjing Zhang
Software Mentions: 1
Published: almost 9 years ago
10.1038/s41396-018-0153-6
Biogeographic patterns of abundant and rare bacterioplankton in three subtropical bays resulting from selective and neutral processes
Cited by: 241
Author(s): Yuanyuan Mo, Wenjing Zhang, Jun Yang, Yan Lin, Yu Zheng, Senjie Lin
Software Mentions: 1
Published: over 8 years ago
10.1111/pala.12278
Faunal response to sea-level and climate change in a short-lived seaway: Jurassic of the Western Interior, USA
Cited by: 25
Author(s): Silvia Danise, Steven M. Holland
Software Mentions: 1
Published: over 9 years ago
10.3389/fpls.2020.00841
Plant Functional Niches in Forests Across Four Climatic Zones: Exploring the Periodic Table of Niches Based on Plant Functional Traits
Cited by: 9
Author(s): Ruoyun Yu, Jihong Huang, Xu Yue, Yi Ding
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0058269
Diversity and Abundance of the Bacterial Community of the Red Macroalga Porphyra umbilicalis: Did Bacterial Farmers Produce Macroalgae?
Cited by: 93
Author(s): Lilibeth Miranda, Keith W. Hutchison, Arthur R. Grossman, Susan H. Brawley
Software Mentions: 1
Published: over 13 years ago
10.1038/s41598-021-82993-9
Pangenome analysis reveals genetic isolation in Campylobacter hyointestinalis subspecies adapted to different mammalian hosts
Cited by: 6
Author(s): Daniela Costa, Simon Lévesque, Nitin Kumar, Pablo Fresia, Ignacio Ferrés, Trevor D. Lawley, Gregorio Iraola
Software Mentions: 1
Published: over 5 years ago
10.3389/fphys.2018.00470
Small Bowel Transit and Altered Gut Microbiota in Patients With Liver Cirrhosis
Cited by: 23
Author(s): Yang Liu, Ye Jin, Jun Li, Lei Zhao, Zhengtian Li, Jun Xu, Fuya Zhao, Jing Feng, Huinan Chen, Chengyuan Fang, Rojina Shilpakar, Yunwei Wei
Software Mentions: 1
Published: over 8 years ago
10.1038/s41598-021-83112-4
Genetic structure of a remnant Acropora cervicornis population
Cited by: 3
Author(s): Steven W. J. Canty, Graeme Fox, Jennifer K. Rowntree, Richard F. Preziosi
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0086291
Parrotfish Size: A Simple yet Useful Alternative Indicator of Fishing Effects on Caribbean Reefs?
Cited by: 50
Author(s): Henri Vallès, Hazel A. Oxenford
Software Mentions: 1
Published: over 12 years ago
10.3897/zookeys.510.9020
Hay-bait traps are a useful tool for sampling of soil dwelling millipedes and centipedes
Cited by: 6
Author(s): Ivan H. Tuf, Vojtěch Chmelík, Igor Dobroruka, Lucie Hábová, Petra Hudcová, Ján Šipoš, Slavomír Stašiov
Software Mentions: 1
Published: about 11 years ago
10.1098/rsos.181499
Biochar application on paddy and purple soils in southern China: soil carbon and biotic activity
Cited by: 17
Author(s): Yan Shen, Zhengyang Niu, Aigai Zhang, Huimin Yan, Zhenli He, Kuanxin He, Xianyi Xiao, Nianlei Wang, Chengwei Guan, Liu Guoshun
Software Mentions: 1
Published: about 7 years ago
10.3390/ijerph17145000
Breeding Habitat Preferences of Major Culicoides Species (Diptera: Ceratopogonidae) in Germany
Cited by: 12
Author(s): Doreen Werner, Sarah Groschupp, C. Bauer, Helge Kampen
Software Mentions: 1
Published: about 6 years ago
10.3897/mycokeys.62.38923
Diversity and community of culturable endophytic fungi from stems and roots of desert halophytes in northwest China
Cited by: 27
Author(s): Jialong Li, Xiang Sun, Yong Zheng, Pingli Lu, Yong-Long Wang, Liangdong Guo
Software Mentions: 1
Published: over 6 years ago
10.3389/fmicb.2018.02195
Cucumber (Cucumis sativus L.) Seedling Rhizosphere Trichoderma and Fusarium spp. Communities Altered by Vanillic Acid
Cited by: 30
Author(s): Shaocan Chen, Hongjie Yu, Xingang Zhou, Fengzhi Wu
Software Mentions: 1
Published: almost 8 years ago
10.1098/rsos.190965
Old lake versus young taxa: a comparative phylogeographic perspective on the evolution of Caspian Sea gastropods (Neritidae: <i>Theodoxus</i> )
Cited by: 20
Author(s): Arthur F. Sands, Thomas A. Neubauer, Saeid Nasibi, Majid Fasihi Harandi, Vitaliy V. Anistratenko, Thomas Wilke, Christian Albrecht
Software Mentions: 1
Published: almost 7 years ago
10.1098/rsos.182049
Compound- and context-dependent effects of antibiotics on greenhouse gas emissions from livestock
Cited by: 4
Author(s): Rebecca Danielsson, Jane M. Lucas, Josef Dahlberg, Mohammad Ramin, Sigrid Agenäs, Ali Bayat, Ilma Tapio, Tobin J. Hammer, Tomas Roslin
Software Mentions: 1
Published: almost 7 years ago
10.3390/ijerph15061287
Trends and Knowledge Gaps in the Study of Nature-Based Participation by Latinos in the United States
Cited by: 6
Author(s): Pooja Tandon, Lauren M. Kuehne, Julian D. Olden
Software Mentions: 1
Published: about 8 years ago
10.3390/ijerph17155285
Valley Fever: Environmental Risk Factors and Exposure Pathways Deduced from Field Measurements in California
Cited by: 12
Author(s): Antje Lauer, Vicken Etyemezian, George Nikolich, Carl T. Kloock, Angel Franco Arzate, Fazalath Sadiq Batcha, Manpreet Kaur, Eduardo García, Jasleen Mander, Alyce Kayes Passaglia
Software Mentions: 1
Published: about 6 years ago
10.3389/fphys.2021.669355
Shifts in the Oral Microbiota During a Four-Week Commercial Saturation Dive to 200 Meters
Cited by: 3
Author(s): Roxane Monnoyer, Kjersti Haugum, Jacky Lautridou, Arnar Flatberg, Astrid Hjelde, Ingrid Eftedal
Software Mentions: 1
Published: over 5 years ago
10.1098/rsos.191112
Parasite diversity and ecology in a model species, the guppy ( <i>Poecilia reticulata</i> ) in Trinidad
Cited by: 9
Author(s): Ryan S. Mohammed, Stanley D. King, Paul Bentzen, David J. Marcogliese, Cock van Oosterhout, Jackie Lighten
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0211272
Can mowing restore boreal rich-fen vegetation in the face of climate change?
Cited by: 11
Author(s): Louise Ross, James D. M. Speed, Dag‐Inge Øien, Mateusz Grygoruk, Kristian Hassel, Anders Lyngstad, Asbjørn Moen
Software Mentions: 1
Published: over 7 years ago
10.1371/journal.pone.0167764
Emerging New Crop Pests: Ecological Modelling and Analysis of the South American Potato Psyllid Russelliana solanicola (Hemiptera: Psylloidea) and Its Wild Relatives
Cited by: 16
Author(s): Mindy M. Syfert, Liliya Štarhová Serbina, Daniel Burckhardt, Sandra Knapp, Diana M. Percy
Software Mentions: 1
Published: over 9 years ago
10.3389/fmicb.2019.01735
Comparative Analyses of Fecal Microbiota in European Mouflon (Ovis orientalis musimon) and Blue Sheep (Pseudois nayaur) Living at Low or High Altitudes
Cited by: 24
Author(s): Guolei Sun, Honghai Zhang, Qinguo Wei, Chao Zhao, Xiufeng Yang, Xiaoyang Wu, Tian Xia, Guangshuai Liu, Lei Zhang, Ying Gao, Weilai Sha, Ying Liu
Software Mentions: 1
Published: about 7 years ago
10.1098/rsos.201805
Microbiota dysbiosis in honeybee ( <i>Apis mellifera</i> L <i>.</i> ) larvae infected with brood diseases and foraging bees exposed to agrochemicals
Cited by: 11
Author(s): Manhong Ye, Shuhang Fan, Xiaoyuan Li, Islam Mohd Tarequl, Chun-Xiang Yan, Wanhong Wei, Shengmei Yang, Bin Zhou
Software Mentions: 1
Published: over 5 years ago
10.3389/fmicb.2018.03020
The Effect of Density-Dependent Phase on the Locust Gut Bacterial Composition
Cited by: 14
Author(s): Omer Lavy, Uri Gophna, Eran Gefen, Amir Ayali
Software Mentions: 1
Published: over 7 years ago
10.1038/s41396-019-0417-9
Response of the eukaryotic plankton community to the cyanobacterial biomass cycle over 6 years in two subtropical reservoirs
Cited by: 115
Author(s): Lemian Liu, Huihuang Chen, Min Liu, Jun Yang, Peng Xiao, David M. Wilkinson
Software Mentions: 1
Published: over 7 years ago
10.1002/ece3.2548
Interactive effects between plant functional types and soil factors on tundra species diversity and community composition
Cited by: 14
Author(s): Maitane Iturrate‐Garcia, Michael J. O’Brien, Olga V. Khitun, Samuel Abiven, Pascal A. Niklaus, Gabriela Schaepman‐Strub
Software Mentions: 1
Published: almost 10 years ago
10.3389/fphar.2020.00258
Hypertension Is Associated With Intestinal Microbiota Dysbiosis and Inflammation in a Brazilian Population
Cited by: 64
Author(s): Gabriela Silveira-Nunes, Danielle Fernandes Durso, Luiz Roberto Alves de Oliveira, Eloísa Helena Medeiros Cunha, Tatiani Uceli Maioli, Angélica T. Vieira, Elaine Speziali, Rodrigo Corrêa-Oliveira, Olindo Assis Martins‐Filho, Andréa Teixeira-Carvalho, Claudio Franceschi, Simone Rampelli, Silvia Turroni, Patrizia Brigidi, Ana Maria Caetano Faria
Software Mentions: 1
Published: over 6 years ago
10.1371/journal.pone.0196171
Fecal microbiome of periparturient dairy cattle and associations with the onset of Salmonella shedding
Cited by: 13
Author(s): Lohendy Muñoz-Vargas, Stephen O. Opiyo, R. Digianantonio, Michele L. Williams, Asela J. Wijeratne, Gregory Habing
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0111190
Shifts in Species Interactions Due to the Evolution of Functional Differences between Endemics and Non-Endemics: An Endemic Syndrome Hypothesis
Cited by: 18
Author(s): Courtney E. Gorman, Brad M. Potts, Jennifer A. Schweitzer, Joseph K. Bailey
Software Mentions: 1
Published: almost 12 years ago
10.24272/j.issn.2095-8137.2018.047
Identification and characterization of short tandem repeats in the Tibetan macaque genome based on resequencing data
Cited by: 3
Author(s): Sanxu Liu, Wei Hou, Xueyan Zhang, Changjun Peng, Bisong Yue, Zhenxin Fan, Jing Li
Software Mentions: 1
Published: over 8 years ago
10.3389/fphar.2020.00297
Traditional Chinese Medicine Formula Kang Shuai Lao Pian Improves Obesity, Gut Dysbiosis, and Fecal Metabolic Disorders in High-Fat Diet-Fed Mice
Cited by: 42
Author(s): Gong Shouliang, Tingting Ye, Meixia Wang, Mengying Wang, Yufei Li, Lina Ma, Yuhang Yang, Yi Wang, Xiaoping Zhao, Li Liu, Min Yang, Huan Chen, Jing Qian
Software Mentions: 1
Published: over 6 years ago
10.3389/fphar.2021.657827
Microbiome-Metabolomics Analysis Reveals the Protection Mechanism of α-Ketoacid on Adenine-Induced Chronic Kidney Disease in Rats
Cited by: 14
Author(s): Yenan Mo, Sun Huang, Lei Zhang, Geng Wang, Lixin Wang, Chuan Zou, Yuchi Wu, Chunlan Ji, Xusheng Liu, Zhaoyu Lu
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0026284
Inflammatory Bowel Diseases Phenotype, C. difficile and NOD2 Genotype Are Associated with Shifts in Human Ileum Associated Microbial Composition
Cited by: 207
Author(s): Ellen Li, Christina M. Hamm, Ajay Gulati, R. Balfour Sartor, Hongyan Chen, Xiao Wu, Tianyi Zhang, F. James Rohlf, Wei Zhu, C. Charles Gu, Charles E. Robertson, Norman R. Pace, Edgar C. Boedeker, Noam Harpaz, Jeffrey Yuan, George M. Weinstock, Erica Sodergren, Daniel N. Frank
Software Mentions: 1
Published: over 14 years ago
10.1038/s41598-021-84790-w
Associations between dog keeping and indoor dust microbiota
Cited by: 9
Author(s): Jenni M. Mäki, Pirkka V. Kirjavainen, Martin Täubel, Eija Piippo‐Savolainen, Katri Backman, Anne Hyvärinen, Pauli Tuoresmäki, Balamuralikrishna Jayaprakash, Joachim Heinrich, Gunda Herberth, Marie Standl, Juha Pekkanen, Anne M. Karvonen
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0147100
Impact of Phanerochaete chrysosporium on the Functional Diversity of Bacterial Communities Associated with Decaying Wood
Cited by: 31
Author(s): Vincent Hervé, Elodie Ketter, Jean-Claude Pierrat, Éric Gelhaye, Pascale Frey‐Klett
Software Mentions: 1
Published: over 10 years ago
10.3389/fphar.2021.689092
Structural Characterization of Peptides From Huangjiu and Their Regulation of Hepatic Steatosis and Gut Microbiota Dysbiosis in Hyperlipidemia Mice
Cited by: 15
Author(s): Ying Shi, Ruixue Feng, Jieqi Mao, Shuangping Liu, Zhiping Zhou, Zhongwei Ji, Shuguang Chen, Jian Mao
Software Mentions: 1
Published: over 5 years ago
10.1038/s41396-019-0550-5
Microbial succession during wheat bran fermentation and colonisation by human faecal microbiota as a result of niche diversification
Cited by: 27
Author(s): Kim De Paepe, Joran Verspreet, Tom Van de Wiele
Software Mentions: 1
Published: almost 7 years ago
10.3389/fimmu.2021.700603
Thymic T-Cell Production Is Associated With Changes in the Gut Microbiota in Young Chicks
Cited by: 4
Author(s): Jiaheng Cheng, Yushan Yuan, Fang Zhao, Jianwei Chen, Peng Chen, Ying Li, Xia Yan, Chenglong Luo, Dingming Shu, Hao Qu, Jian Ji
Software Mentions: 1
Published: about 5 years ago
10.3389/fmicb.2018.01830
Comparative Analyses of the Digestive Tract Microbiota of New Guinean Passerine Birds
Cited by: 36
Author(s): Kasun H. Bodawatta, Kateřina Sam, Knud A. Jønsson, Michael Poulsen
Software Mentions: 1
Published: about 8 years ago
10.3389/fphar.2020.00955
Simiao Decoction Alleviates Gouty Arthritis by Modulating Proinflammatory Cytokines and the Gut Ecosystem
Cited by: 32
Author(s): Xiaoying Lin, Tiejuan Shao, Lin Huang, Xiaofang Wen, Mingzhu Wang, Chengping Wen, Zhixing He
Software Mentions: 1
Published: about 6 years ago
10.1371/journal.pone.0028654
Changes in Human Fecal Microbiota Due to Chemotherapy Analyzed by TaqMan-PCR, 454 Sequencing and PCR-DGGE Fingerprinting
Cited by: 161
Author(s): Jutta Zwielehner, Cornelia Laßl, Berit Hippe, Angelika Pointner, Olivier J. Switzeny, Marlene Remely, Kitzweger Elvira, Ruckser Reinhard, Alexander G. Haslberger
Software Mentions: 1
Published: almost 15 years ago
10.3389/fped.2021.674716
Low-Dose Antibiotic Prophylaxis Induces Rapid Modifications of the Gut Microbiota in Infants With Vesicoureteral Reflux
Cited by: 8
Author(s): William Morello, Federica D’Amico, Jessica Serafinelli, Silvia Turroni, Isabella Abati, Jessica Fiori, Esra Baskın, Fatoş Yalçınkaya, Augustina Jankauskienė, Marco Pennesi, Aleksandra Żurowska, Francesca Becherucci, Dorota Drożdż, Djalila Mekahli, Grażyna Krzemień, Claudio La Scola, Katarzyna Taranta-Janusz, Otto Mehls, Franz Schaefer, Marco Candela, Giovanni Montini
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0066184
Variations in Soil Microbial Communities and Residues Along an Altitude Gradient on the Northern Slope of Changbai Mountain, China
Cited by: 67
Author(s): Bin Zhang, Chao Liang, Hongbo He, Xudong Zhang
Software Mentions: 1
Published: over 13 years ago
10.1038/sdata.2017.152
Gut bacterial communities of diarrheic patients with indications of Clostridioides difficile infection
Cited by: 13
Author(s): Dominik Schneider, Andrea Thürmer, Kathleen Gollnow, Raimond Lugert, Katrin Gunka, Uwe Groß, Rolf Daniel
Software Mentions: 1
Published: almost 9 years ago
10.1371/journal.pone.0093422
Microbial Community Functional Structures in Wastewater Treatment Plants as Characterized by GeoChip
Cited by: 40
Author(s): Xiaohui Wang, Yu Xia, Xianghua Wen, Yunfeng Yang, Jizhong Zhou
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0159035
Temporal Decay in Timber Species Composition and Value in Amazonian Logging Concessions
Cited by: 45
Author(s): Vanessa Richardson, Carlos A. Peres
Software Mentions: 1
Published: about 10 years ago
10.3389/fnut.2019.00057
Impact of the Food Additive Titanium Dioxide (E171) on Gut Microbiota-Host Interaction
Cited by: 81
Author(s): Gabriela Veronica Pinget, Jiangning Tan, Bartlomiej Janac, Nadeem O. Kaakoush, Alexandra S. Angelatos, John O’Sullivan, Yen Chin Koay, Frédéric Sierro, Joel Davis, Shiva Kamini Divakarla, Dipesh Khanal, Robert J. Moore, Dragana Stanley, Wojciech Chrzanowski, Laurence Macia
Software Mentions: 1
Published: over 7 years ago
10.3389/fmicb.2019.02209
Variation in Actinobacterial Community Composition and Potential Function in Different Soil Ecosystems Belonging to the Arid Heihe River Basin of Northwest China
Cited by: 75
Author(s): Binglin Zhang, Xiukun Wu, Xisheng Tai, Likun Sun, Minghui Wu, Wei Zhang, Ximing Chen, Gaosen Zhang, Tuo Chen, Guangxiu Lu, Paul Dyson
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pone.0007071
Disturbance Alters the Phylogenetic Composition and Structure of Plant Communities in an Old Field System
Cited by: 88
Author(s): Russell Dinnage
Software Mentions: 1
Published: almost 17 years ago
10.1038/emi.2016.46
The consequences of reservoir host eradication on disease epidemiology in animal communities
Cited by: 12
Author(s): Farah Al-Shorbaji, Benjamín Roche, Rodolphe E. Gozlan, Ronald W. Britton, Demetra Andreou
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0023445
Tree Resin Composition, Collection Behavior and Selective Filters Shape Chemical Profiles of Tropical Bees (Apidae: Meliponini)
Cited by: 35
Author(s): Sara D. Leonhardt, Thomas Schmitt, Nico Blüthgen
Software Mentions: 1
Published: about 15 years ago
10.1186/1750-1326-9-36
Diet and exercise orthogonally alter the gut microbiome and reveal independent associations with anxiety and cognition
Cited by: 237
Author(s): Silvia S. Kang, Patricio Jeraldo, Aishe Kurti, Margret E. Berg Miller, Marc D. Cook, Keith Whitlock, Nigel Goldenfeld, Jeffrey A. Woods, Bryan A. White, Nicholas Chia, John Denis Fryer
Software Mentions: 1
Published: about 12 years ago
10.1038/srep03829
Rapid recovery of soil bacterial communities after wildfire in a Chinese boreal forest
Cited by: 112
Author(s): Xingjia Xiang, Yu Shi, Jian Yang, Jianjian Kong, Xiangui Lin, Huayong Zhang, Jun Zeng, Haiyan Chu
Software Mentions: 1
Published: over 12 years ago
10.3389/fmicb.2018.02344
Response of Gut Microbiota to Dietary Fiber and Metabolic Interaction With SCFAs in Piglets
Cited by: 58
Author(s): Boshuai Liu, Wenjing Wang, Xiaoyan Zhu, Xiao Sun, Junnan Xiao, Defeng Li, Yalei Cui, Chengzhang Wang, Shi Ya
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0062026
Impact of Oral Typhoid Vaccination on the Human Gut Microbiota and Correlations with S. Typhi-Specific Immunological Responses
Cited by: 78
Author(s): Emiley A. Eloe‐Fadrosh, Monica A. McArthur, Anna M. Seekatz, Elliott F. Drábek, David A. Rasko, Marcelo B. Sztein, Claire M. Fraser
Software Mentions: 1
Published: over 13 years ago
10.1038/s41598-021-86756-4
Partial shading by solar panels delays bloom, increases floral abundance during the late-season for pollinators in a dryland, agrivoltaic ecosystem
Cited by: 31
Author(s): Maggie Graham, Serkan Ateş, Andony Melathopoulos, Andrew R. Moldenke, Sandra J. DeBano, Lincoln Best, C. W. Higgins
Software Mentions: 1
Published: over 5 years ago
10.1038/srep09456
A pyrosequencing insight into sprawling bacterial diversity and community dynamics in decaying deadwood logs of Fagus sylvatica and Picea abies
Cited by: 86
Author(s): Björn Hoppe, Krüger Krger, Tiemo Kahl, Tobias Arnstadt, François Buscot, Jürgen Bauhus, Tesfaye Wubet
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0134402
Effects of Residue Management on Decomposition in Irrigated Rice Fields Are Not Related to Changes in the Decomposer Community
Cited by: 21
Author(s): Anja Schmidt, Katharina John, G. S. Arida, Harald Auge, Roland Brandl, Finbarr G. Horgan, Stefan Hotes, Leonardo Márquez, Nico Radermacher, Josef Settele, Volkmar Wolters, Martin Schädler
Software Mentions: 1
Published: about 11 years ago
10.1002/ece3.7891
Grazing alters species relative abundance by affecting plant functional traits in a Tibetan subalpine meadow
Cited by: 4
Author(s): Qifang He, Kai Jiang, Weicheng Hou, Yang Zhao, Xinhang Sun, Lu Wang, Yike Zou, Zhenhao Zhu, Hui Zhang
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pone.0182579
Impacts of leachates from livestock carcass burial and manure heap sites on groundwater geochemistry and microbial community structure
Cited by: 11
Author(s): Man Jae Kwon, Seong Taek Yun, Baknoon Ham, Jehee Lee, Jun Seop Oh, Weon Wha Jheong
Software Mentions: 1
Published: about 9 years ago
10.3390/ijerph14121443
Factors Effecting the Total Volatile Organic Compound (TVOC) Concentrations in Slovak Households
Cited by: 27
Author(s): Ľudmila Mečiarová, Silvia Vilčeková, Eva Krídlová Burdová, Jozef Kiseľák
Software Mentions: 1
Published: almost 9 years ago
10.3389/fnins.2021.619051
APOE-ε4 Carrier Status and Gut Microbiota Dysbiosis in Patients With Alzheimer Disease
Cited by: 25
Author(s): Min Huang, Gaolian Xu, Mao‐Sheng Ran, Wei Luo, Hui Wang
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0198848
Seasonal variations in diet composition, diet breadth and dietary overlap between three commercially important fish species within a flood-pulse system: The Tonle Sap Lake (Cambodia)
Cited by: 16
Author(s): Heng Kong, Mathieu Chevalier, Sovan Lek, Pascal Laffaille
Software Mentions: 1
Published: about 8 years ago
10.1371/journal.pone.0044203
Soil Fertilization Leads to a Decline in Between-Samples Variability of Microbial Community δ13C Profiles in a Grassland Fertilization Experiment
Cited by: 7
Author(s): Stavros D. Veresoglou, Barry Thornton, George Menexes, Andreas P. Mamolos, D. S. Veresoglou
Software Mentions: 1
Published: about 14 years ago
10.3389/fmicb.2014.00743
Benthic ammonia oxidizers differ in community structure and biogeochemical potential across a riverine delta
Cited by: 23
Author(s): Julian Damashek, Jay W. Smith, Annika C. Mosier, Christopher A. Francis
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0141087
Impact of Water Chemistry, Pipe Material and Stagnation on the Building Plumbing Microbiome
Cited by: 105
Author(s): Peng Ji, Jeffrey Parks, Marc Edwards, Amy Pruden
Software Mentions: 1
Published: almost 11 years ago
10.1371/journal.pone.0139371
The Impact of Conservation Management on the Community Composition of Multiple Organism Groups in Eutrophic Interconnected Man-Made Ponds
Cited by: 9
Author(s): Pieter Lemmens, Joachim Mergeay, Jeroen Van Wichelen, Luc De Meester, Steven Declerck
Software Mentions: 1
Published: almost 11 years ago
10.1371/journal.pone.0208493
Belowground fungal community diversity and composition associated with Norway spruce along an altitudinal gradient
Cited by: 18
Author(s): Max Emil Schön, Kay Nieselt, Sigisfredo Garnica
Software Mentions: 1
Published: almost 8 years ago
10.3390/cancers13163999
Gut Microbiota Dynamics during Chemotherapy in Epithelial Ovarian Cancer Patients Are Related to Therapeutic Outcome
Cited by: 17
Author(s): Federica D’Amico, Anna Myriam Perrone, Simone Rampelli, Sara Coluccelli, Monica Barone, Gloria Ravegnini, Marco Fabbrini, Patrizia Brigidi, Pierandrea De Iaco, Silvia Turroni
Software Mentions: 1
Published: about 5 years ago
10.3390/ijerph18042168
Pavement Overrides the Effects of Tree Species on Soil Bacterial Communities
Cited by: 2
Author(s): Yinhong Hu, Weiwei Yu, Bowen Cui, Yuanyuan Chen, Hua Zheng, Xiaoke Wang
Software Mentions: 1
Published: over 5 years ago
10.3389/fmolb.2020.00133
An Ancient Residue Metabolomics-Based Method to Distinguish Use of Closely Related Plant Species in Ancient Pipes
Cited by: 7
Author(s): Korey J. Brownstein, Shannon Tushingham, William J. Damitio, Tung T. Nguyen, David R. Gang
Software Mentions: 1
Published: about 6 years ago
10.3390/ijerph18136797
Feasibility Study on the Application of Microbial Agent Modified Water-Jet Loom Sludge for the Restoration of Degraded Soil in Mining Areas
Cited by: 1
Author(s): Chuning Ji, Jiu Huang, Yu Tian, Ying Liu, Joshua Bosco Barvor, Xintong Shao, Zi’ao Li
Software Mentions: 1
Published: about 5 years ago
10.3389/fmicb.2014.00311
A dual-species co-cultivation system to study the interactions between Roseobacters and dinoflagellates
Cited by: 90
Author(s): Hui Wang, Jürgen Tomasch, Michael Jarek, Irene Wagner‐Döbler
Software Mentions: 1
Published: about 12 years ago
10.1371/journal.pone.0084761
Microbial Functional Potential and Community Composition in Permafrost-Affected Soils of the NW Canadian Arctic
Cited by: 74
Author(s): Béatrice A. Frank-Fahle, Étienne Yergeau, Charles W. Greer, Hugues Lantuit, Dirk Wagner
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0063375
Ecological Drivers of Biogeographic Patterns of Soil Archaeal Community
Cited by: 23
Author(s): Yuqi Zheng, Peng Cao, Bojie Fu, Jane Hughes, Ji‐Zheng He
Software Mentions: 1
Published: over 13 years ago
10.1371/journal.pone.0172160
The role of dispersal mode and habitat specialization for metacommunity structure of shallow beach invertebrates
Cited by: 19
Author(s): Iván F. Rodil, Paloma Lucena-Moya, Henri Jokinen, Victoria Marja Sofia Ollus, Håkan Wennhage, Anna Villnäs, Alf Norkko
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0044578
At Limits of Life: Multidisciplinary Insights Reveal Environmental Constraints on Biotic Diversity in Continental Antarctica
Cited by: 51
Author(s): Catarina Magalhães, Mark I. Stevens, S. Craig Cary, Becky A. Ball, B. C. Storey, Diana H. Wall, Roman Türk, Ulrike Ruprecht
Software Mentions: 1
Published: almost 14 years ago
10.3897/zookeys.597.6792
Spatial and environmental correlates of species richness and turnover patterns in European cryptocephaline and chrysomeline beetles
Cited by: 7
Author(s): Andrea Freijeiro, Andrés Baselga
Software Mentions: 1
Published: over 10 years ago
10.3390/ijms12052769
Phenols in Leaves and Bark of Fagus sylvatica as Determinants of Insect Occurrences
Cited by: 22
Author(s): Panos V. Petrakis, K. Spanos, Alan Feest, Evangelia N. Daskalakou
Software Mentions: 1
Published: over 15 years ago
10.1155/2018/3292309
Hirschsprung’s Associated Enterocolitis (HAEC) Personalized Treatment with Probiotics Based on Gene Sequencing Analysis of the Fecal Microbiome
Cited by: 3
Author(s): Georg Singer, Karl Kashofer, Christoph Castellani, Holger Till
Software Mentions: 1
Published: almost 8 years ago
10.3389/fmicb.2016.00661
Dietary Shifts May Trigger Dysbiosis and Mucous Stools in Giant Pandas (Ailuropoda melanoleuca)
Cited by: 27
Author(s): Candace L. Williams, Kimberly A. Dill‐McFarland, Michael W. Vandewege, Darrell Sparks, Scott T. Willard, Andrew J. Kouba, Garret Suen, A. C. Brown
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.pone.0094643
Importance of Saprotrophic Freshwater Fungi for Pollen Degradation
Cited by: 88
Author(s): Christian Wurzbacher, Stefan Rösel, Anna Rychła, Hans‐Peter Grossart
Software Mentions: 1
Published: over 12 years ago
10.1371/journal.pone.0226545
The microbiota composition of the offspring of patients with gestational diabetes mellitus (GDM)
Cited by: 39
Author(s): Valentina Ponzo, Ilario Ferrocino, Adriana Zarovska, Maria Bernadette Amenta, Filomena Leone, C Monzeglio, Rosalba Rosato, Marianna Pellegrini, Roberto Gambino, Maurizio Cassader, Ezio Ghigo, Luca Simone Cocolin, Simona Bo
Software Mentions: 1
Published: over 6 years ago