10.1038/srep42242

Metagenomic survey of the taxonomic and functional microbial communities of seawater and sea ice from the Canadian Arctic
Cited by: 56
Author(s): Étienne Yergeau, Christine Michel, Julien Tremblay, Andrea Niemi, Thomas King, Joanne Wyglinski, Kenneth Lee, Charles W. Greer
Software Mentions: 1
Published: over 9 years ago

10.1038/srep42184

Arbuscular mycorrhiza enhance the rate of litter decomposition while inhibiting soil microbial community development
Cited by: 48
Author(s): Heng Gui, Kevin D. Hyde, Jianchu Xu, Peter E. Mortimer
Software Mentions: 1
Published: over 9 years ago

10.1038/srep42469

Responses of spatial-temporal dynamics of bacterioplankton community to large-scale reservoir operation: a case study in the Three Gorges Reservoir, China
Cited by: 32
Author(s): Zhe Li, Lunhui Lu, Jinsong Guo, Jiuzhong Yang, Jiachao Zhang, Bin He, Lisha Xu
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0066184

Variations in Soil Microbial Communities and Residues Along an Altitude Gradient on the Northern Slope of Changbai Mountain, China
Cited by: 67
Author(s): Bin Zhang, Chao Liang, Hongbo He, Xudong Zhang
Software Mentions: 1
Published: over 13 years ago

10.1186/s12864-020-06860-z

Comparative analysis of single-cell transcriptomics in human and zebrafish oocytes
Cited by: 9
Author(s): Handan Can, Sree Krishna Chanumolu, Elena González-Muñoz, Sukumal Prukudom, Hasan H. Otu, José B. Cibelli
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-016-2991-9

Gene content dissimilarity for subclassification of highly similar microbial strains
Cited by: 12
Author(s): Qichao Tu, Liwu Lin
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0139371

The Impact of Conservation Management on the Community Composition of Multiple Organism Groups in Eutrophic Interconnected Man-Made Ponds
Cited by: 9
Author(s): Pieter Lemmens, Joachim Mergeay, Jeroen Van Wichelen, Luc De Meester, Steven Declerck
Software Mentions: 1
Published: about 11 years ago

10.1038/srep44565

Effect of pesticides on microbial communities in container aquatic habitats
Cited by: 98
Author(s): Ephantus J. Muturi, Ravi Kiran Donthu, Christopher J. Fields, Imelda K. Moise, Chang‐Hyun Kim
Software Mentions: 1
Published: over 9 years ago

10.1038/srep44888

Daytime warming has stronger negative effects on soil nematodes than night-time warming
Cited by: 9
Author(s): Xiumin Yan, Kehong Wang, Liangcheng Song, Xuefeng Wang, Donghui Wu
Software Mentions: 1
Published: over 9 years ago

10.3390/ani11051390

Intestinal Microbes of Hooded Cranes (Grus monacha) Wintering in Three Lakes of the Middle and Lower Yangtze River Floodplain
Cited by: 3
Author(s): Jingjing Gu, Lizhi Zhou
Software Mentions: 1
Published: over 5 years ago

10.3390/ani11010233

Is Intestinal Bacterial Diversity Enhanced by Trans-Species Spread in the Mixed-Species Flock of Hooded Crane (Grus monacha) and Bean Goose (Anser fabalis) Wintering in the Lower and Middle Yangtze River Floodplain?
Cited by: 6
Author(s): Zhuqing Yang, Lizhi Zhou
Software Mentions: 1
Published: over 5 years ago

10.1038/srep45289

Land-use types and soil chemical properties influence soil microbial communities in the semiarid Loess Plateau region in China
Cited by: 78
Author(s): Qiguo Tian, Takeshi Taniguchi, Weiyu Shi, Guoqing Li, Norikazu Yamanaka, Sheng Du
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0063375

Ecological Drivers of Biogeographic Patterns of Soil Archaeal Community
Cited by: 23
Author(s): Yuqi Zheng, Peng Cao, Bojie Fu, Jane Hughes, Ji‐Zheng He
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0172160

The role of dispersal mode and habitat specialization for metacommunity structure of shallow beach invertebrates
Cited by: 19
Author(s): Iván F. Rodil, Paloma Lucena-Moya, Henri Jokinen, Victoria Marja Sofia Ollus, Håkan Wennhage, Anna Villnäs, Alf Norkko
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0226545

The microbiota composition of the offspring of patients with gestational diabetes mellitus (GDM)
Cited by: 39
Author(s): Valentina Ponzo, Ilario Ferrocino, Adriana Zarovska, Maria Bernadette Amenta, Filomena Leone, C Monzeglio, Rosalba Rosato, Marianna Pellegrini, Roberto Gambino, Maurizio Cassader, Ezio Ghigo, Luca Simone Cocolin, Simona Bo
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0104439

Trait-Specific Responses of Wild Bee Communities to Landscape Composition, Configuration and Local Factors
Cited by: 86
Author(s): Sebastian Hopfenmüller, Ingolf Steffan‐Dewenter, Andrea Holzschuh
Software Mentions: 1
Published: about 12 years ago

10.1038/srep45735

Microbial community response to hydration-desiccation cycles in desert soil
Cited by: 69
Author(s): Adam Šťovíček, Minsu Kim, Dani Or, Osnat Gillor
Software Mentions: 1
Published: over 9 years ago

10.1038/srep46407

Distinct Soil Microbial Communities in habitats of differing soil water balance on the Tibetan Plateau
Cited by: 30
Author(s): Yuntao Li, Jonathan M. Adams, Yu Shi, Hao Wang, Jin‐Sheng He, Haiyan Chu
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0142031

Urbanization Increases Pathogen Pressure on Feral and Managed Honey Bees
Cited by: 61
Author(s): Elsa Youngsteadt, R. Holden Appler, Margarita M. López‐Uribe, David R. Tarpy, Steven D. Frank
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0042238

Drosophila Regulate Yeast Density and Increase Yeast Community Similarity in a Natural Substrate
Cited by: 112
Author(s): Judy A. Stamps, Louie H. Yang, Verónica L. Morales, Kyria Boundy‐Mills
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0141510

The Paternal Landscape along the Bight of Benin – Testing Regional Representativeness of West-African Population Samples Using Y-Chromosomal Markers
Cited by: 8
Author(s): Maarten Larmuseau, Andrea Vessi, Mark A. Jobling, Anneleen Van Geystelen, Giuseppina Primativo, G. Biondi, Cristina Martínez-Labarga, Claudio Ottoni, Ronny Decorte, Olga Rickards
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0080955

Coastal Fish Assemblages Reflect Geological and Oceanographic Gradients Within An Australian Zootone
Cited by: 36
Author(s): Euan S. Harvey, Michael Cappo, Gary A. Kendrick, Dianne L. McLean
Software Mentions: 1
Published: almost 13 years ago

10.1038/s41598-019-43011-1

Radiative transfer modelling reveals why canopy reflectance follows function
Cited by: 15
Author(s): Teja Kattenborn, Sebastian Schmidtlein
Software Mentions: 1
Published: over 7 years ago

10.1186/s12864-018-4721-y

Complex signatures of genomic variation of two non-model marine species in a homogeneous environment
Cited by: 16
Author(s): Erica S. Nielsen, Romina Henriques, Robert J. Toonen, Ingrid S. Knapp, Baocheng Guo, Sophie von der Heyden
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-019-43022-y

Antimicrobial removal on piglets promotes health and higher bacterial diversity in the nasal microbiota
Cited by: 28
Author(s): Florencia Correa‐Fiz, José Maurı́cio Gonçalves dos Santos, Francesc Illas, Virginia Aragón
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0103423

Ecological Consequences of Shifting the Timing of Burning Tallgrass Prairie
Cited by: 30
Author(s): E. Gene Towne, Joseph M. Craine
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0254998

Large-scale survey of prion protein genetic variability in scrapie disease-free goats from the United States
Cited by: 1
Author(s): Mohamed Zeineldin, Kimberly A Lehman, N.J. Urie, Matthew A. Branan, Alyson M. Wiedenheft, Katherine L. Marshall, Suelee Robbe‐Austerman, Tyler C. Thacker
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0218999

A20 in dendritic cells restrains intestinal anti-bacterial peptide expression and preserves commensal homeostasis
Cited by: 6
Author(s): Alice Talpin, Michael G. Kattah, Rommel Advincula, Douglas Fadrosh, Kole Lynch, Brandon LaMere, Kei E. Fujimura, Nabeetha A. Nagalingam, Barbara A. Malynn, Susan V. Lynch, Averil Ma
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0221998

Ectomycorrhizal fungal communities of secondary tropical forests dominated by Tristaniopsis in Bangka Island, Indonesia
Cited by: 5
Author(s): Helbert, Maman Turjaman, Kazuhide Nara
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0252605

Microbiomes of commercially-available pine nuts and sesame seeds
Cited by: 2
Author(s): Megan Fay, Joelle K. Salazar, Padmini Ramachandran, Diana Stewart
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0182579

Impacts of leachates from livestock carcass burial and manure heap sites on groundwater geochemistry and microbial community structure
Cited by: 11
Author(s): Man Jae Kwon, Seong Taek Yun, Baknoon Ham, Jehee Lee, Jun Seop Oh, Weon Wha Jheong
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0179739

Microbiota in anorexia nervosa: The triangle between bacterial species, metabolites and psychological tests
Cited by: 161
Author(s): Francesca Borgo, Alessandra Riva, Alberto Benetti, Maria Cristina Casiraghi, Sara Bertelli, Stefania Garbossa, Simona Anselmetti, Silvio Scarone, Antonio E. Pontiroli, Giulia Morace, Elisa Borghi
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0201307

Habitat, species richness and hantaviruses of sigmodontine rodents within the Interior Atlantic Forest, Paraguay
Cited by: 12
Author(s): Gillian Eastwood, Jeremy V. Camp, Yong Kyu Chu, Aubrey M. Sawyer, Robert Dale Owen, Xueyuan Cao, Martha J. Taylor, Leonardo Valdivieso-Torres, Richard D. Sage, Ashley Yu, Doug Goodin, Vicente J. Martínez Bruyn, Ryan C. McAllister, Laura Rodríguez, Evan P. William, Colleen B. Jonsson
Software Mentions: 1
Published: about 8 years ago

10.1186/1471-2164-15-753

Functional gene arrays-based analysis of fecal microbiomes in patients with liver cirrhosis
Cited by: 33
Author(s): Yanfei Chen, Nan Qin, Jing Guo, Guirong Qian, Daiqiong Fang, Ding Shi, Min Xu, Fan Yang, Zhili He, Joy D. Van Nostrand, Tong Yuan, Ye Deng, Jizhong Zhou, Lanjuan Li
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0178791

Habitat modification and seasonality influence avian haemosporidian parasite distributions in southeastern Brazil
Cited by: 31
Author(s): Francisco C. Ferreira, Raquel A. Rodrigues, Vincenzo A. Ellis, Lemuel Olívio Leite, Magno Augusto Zazá Borges, Érika Martins Braga
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0204128

Linking root exudates to functional plant traits
Cited by: 55
Author(s): Katharina Herz, Sophie Dietz, Karin Gorzolka, Sylvia Haider, Ute Jandt, Dierk Scheel, Helge Bruelheide
Software Mentions: 1
Published: about 8 years ago

10.1186/s12864-016-2700-8

Piglet nasal microbiota at weaning may influence the development of Glässer’s disease during the rearing period
Cited by: 50
Author(s): Florencia Correa‐Fiz, Lorenzo Fraile, Virginia Aragón
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0035969

Land Cover and Rainfall Interact to Shape Waterbird Community Composition
Cited by: 13
Author(s): Colin E. Studds, William V. DeLuca, Matthew E. Baker, Ryan S. King, Peter P. Marra
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0245333

MinION Nanopore-based detection of Clavibacter nebraskensis, the corn Goss’s wilt pathogen, and bacteriomic profiling of necrotic lesions of naturally-infected leaf samples
Cited by: 10
Author(s): Ran Xu, Lorne R. Adam, Julie T. Chapados, Atta Soliman, Fouad Daayf, James T. Tambong
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-44788-x

Microbial community structure of soils in Bamenwan mangrove wetland
Cited by: 33
Author(s): Min Liu, Huiqin Huang, Siqi Bao, Yuhe Tong
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0117791

A Diverse Assemblage of Reef Corals Thriving in a Dynamic Intertidal Reef Setting (Bonaparte Archipelago, Kimberley, Australia)
Cited by: 58
Author(s): Zoe T. Richards, Rodrigo Garcia, Carden C. Wallace, Natalie L. Rosser, Paul Muir
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0235473

Diatom aggregation when exposed to crude oil and chemical dispersant: Potential impacts of ocean acidification
Cited by: 7
Author(s): Jennifer Genzer, Manoj Kamalanathan, Laura Bretherton, Jessica Hillhouse, Chen Xu, Peter H. Santschi, Antonietta Quigg
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0195385

DNA barcoding reveals seasonal shifts in diet and consumption of deep-sea fishes in wedge-tailed shearwaters
Cited by: 14
Author(s): Takashi Komura, Haruko Ando, Kazuo Horikoshi, Hajime Suzuki, Yuji Isagi
Software Mentions: 1
Published: over 8 years ago

10.1186/s12864-020-07316-0

Whole genomic comparative analysis of Streptococcus pneumoniae serotype 1 isolates causing invasive and non-invasive infections among children under 5 years in Casablanca, Morocco
Cited by: 2
Author(s): Néhémie Nzoyikorera, Idrissa Diawara, Pablo Fresia, Fakhreddine Maaloum, Khalid Katfy, Kaotar Nayme, Mossaab Maaloum, Jennifer Cornick, Chrispin Chaguza, Mohammed Timinouni, Houria Belabess, Khalid Zerouali, Naima Elmdaghri
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0073147

Optimising Bait for Pitfall Trapping of Amazonian Dung Beetles (Coleoptera: Scarabaeinae)
Cited by: 72
Author(s): Charles J. Marsh, Júlio Louzada, Wallace Beiroz, Robert M. Ewers
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0101344

Rectal Swabs for Analysis of the Intestinal Microbiota
Cited by: 111
Author(s): Andries E. Budding, Matthijs E. Grasman, Anat Eck, Johannes A. Bogaards, Christina M. J. E. Vandenbroucke-Grauls, Adriaan A. van Bodegraven, Paul H. M. Savelkoul
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0025440

Multiscale Analyses of Mammal Species Composition – Environment Relationship in the Contiguous USA
Cited by: 13
Author(s): Rafi Kent, Avi Bar‐Massada, Yohay Carmel
Software Mentions: 1
Published: about 15 years ago

10.1371/journal.pone.0086382

Host Specificity And Co-Speciation In Avian Haemosporidia In The Western Cape, South Africa
Cited by: 17
Author(s): Sharon Okanga, Graeme S. Cumming, Philip A. R. Hockey, Lisa J. Nupen, Jeffrey L. Peters
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2148-13-79

Testing the inhibitory cascade model in Mesozoic and Cenozoic mammaliaforms
Cited by: 39
Author(s): Thomas J. D. Halliday, Anjali Goswami
Software Mentions: 1
Published: almost 14 years ago

10.3390/ijms22052508

Effector Profiles of Endophytic Fusarium Associated with Asymptomatic Banana (Musa sp.) Hosts
Cited by: 9
Author(s): Elizabeth Czislowski, Isabel Zeil‐Rolfe, E. A. B. Aitken
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-019-46205-9

Land-change dynamics and ecosystem service trends across the central high-Andean Puna
Cited by: 10
Author(s): Santiago Madrigal-Martínez, J. L. Miralles i Garcia
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0016384

Analysis of the Lung Microbiome in the “Healthy” Smoker and in COPD
Cited by: 763
Author(s): John R. Erb-Downward, Deborah Thompson, MeiLan K. Han, Christine M. Freeman, Lisa McCloskey, Lindsay Schmidt, Vincent B. Young, Galen B. Toews, Jeffrey L. Curtis, Baskaran Sundaram, Fernando J. Martínez, Gary B. Huffnagle
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0123238

How Do Alien Plants Fit in the Space-Phylogeny Matrix?
Cited by: 5
Author(s): Şerban Procheş, Félix Forest, Sarah Jose, Michela De Dominicis, Syd Ramdhani, Timothy Wiggill
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0140751

Frugivory in Canopy Plants in a Western Amazonian Forest: Dispersal Systems, Phylogenetic Ensembles and Keystone Plants
Cited by: 23
Author(s): Pablo R. Stevenson, Andrés Link, Sebastián González‐Caro, María Fernanda Torres-Jiménez
Software Mentions: 1
Published: almost 11 years ago

10.1038/s41598-019-46394-3

Non-target Effects of Naphthalene on the Soil Microbial Biomass and Bacterial Communities in the Subalpine Forests of Western China
Cited by: 6
Author(s): Liying Lan, Fan Yang, Li Zhang, Wanqin Yang, Fuzhong Wu, Zhenfeng Xu, Yang Liu, Kai Yue, Xiangyin Ni, Han Li, Shu Liao, Yuwei Liu, Ya Chen
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0114986

Unexpected High Diversity of Galling Insects in the Amazonian Upper Canopy: The Savanna Out There
Cited by: 35
Author(s): Genimar Rebouças Julião, Eduardo Martins Venticinque, Geraldo Wilson Fernandes, Peter W. Price
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0134848

Cleanroom Maintenance Significantly Reduces Abundance but Not Diversity of Indoor Microbiomes
Cited by: 45
Author(s): Alexander Mahnert, Parag Vaishampayan, Alexander J. Probst, Anna Auerbach, Christine Moissl-Eichinger, Kasthuri Venkateswaran, Gabriele Berg
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0075969

Biotic and Abiotic Soil Properties Influence Survival of Listeria monocytogenes in Soil
Cited by: 87
Author(s): Aude Locatelli, Aymé Spor, Claudy Jolivet, Pascal Piveteau, Alain Hartmann
Software Mentions: 1
Published: about 13 years ago

10.1038/s41598-019-46717-4

Uncovering bacterial and functional diversity in macroinvertebrate mitochondrial-metagenomic datasets by differential centrifugation
Cited by: 1
Author(s): Jan‐Niklas Macher, Arjen G.C.L. Speksnijder, Le Qin Choo, Berry van der Hoorn, Willem Renema
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0024512

Flooding Greatly Affects the Diversity of Arbuscular Mycorrhizal Fungi Communities in the Roots of Wetland Plants
Cited by: 76
Author(s): Yutao Wang, Yelin Huang, Qiu Qiu, Guorong Xin, Zhongyi Yang, Suhua Shi
Software Mentions: 1
Published: about 15 years ago

10.1038/s41598-019-46851-z

No impact of transgenic cry1Ie maize on the diversity, abundance and composition of soil fauna in a 2-year field trial
Cited by: 13
Author(s): Chunmiao Fan, Frank F. Wu, Jinye Dong, Baifeng Wang, Jia Yin, Xinyuan Song
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0137429

Dysbiosis in the Gut Microbiota of Patients with Multiple Sclerosis, with a Striking Depletion of Species Belonging to Clostridia XIVa and IV Clusters
Cited by: 572
Author(s): Sachiko Miyake, Sangwan Kim, Wataru Suda, Koichiro Oshima, Masakazu Nakamura, Takako Matsuoka, Norio Chihara, Atsuko Tomita, Wakiro Sato, Seok Won Kim, Hidetoshi Morita, Masahira Hattori, Takashi Yamamura
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0097925

The Macroecology of Airborne Pollen in Australian and New Zealand Urban Areas
Cited by: 58
Author(s): Simon Haberle, David M. J. S. Bowman, Rewi M. Newnham, Fay H. Johnston, Paul J. Beggs, Jeroen Buters, Bradley C. Campbell, Bircan Erbas, Ian D. Godwin, Brett J. Green, Alfredo Huete, Alison K. Jaggard, Danielle E. Medek, Frank Murray, Ed Newbigin, M. Thibaudon, Don Vicendese, Grant J. Williamson, Janet M. Davies
Software Mentions: 1
Published: over 12 years ago

10.1186/s12862-019-1443-y

Genetic and morphological divergence among three closely related Phrynocephalus species (Agamidae)
Cited by: 13
Author(s): Chaochao Hu, Yanqing Wu, Lan Ma, Yijing Chen, Xiang Ji
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-019-47856-4

Genetics, morphology and diet of introduced populations of the ant-eating Texas Horned Lizard (Phrynosoma cornutum)
Cited by: 2
Author(s): Courtney Heuring, Diane Barber, Nathan D. Rains, Devin R. Erxleben, C. Lozano Martin, Dean A. Williams, Eric J. McElroy
Software Mentions: 1
Published: about 7 years ago

10.3390/ani9100761

Bovine Breeds Identification by Trichological Analysis
Cited by: 4
Author(s): Gisele Aparecida Félix, Maria Clorínda Soares Fíoravantí, Martino Cassandro, Nicola Tormen, Juliana Quadros, R. S. Juliano, A. A. do Egito, Maria Ivete de Moura, Ubiratan Piovezan
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0214390

An island of wildlife in a human-dominated landscape: The last fragment of primary forest on the Osa Peninsula’s Golfo Dulce coastline, Costa Rica
Cited by: 6
Author(s): Beatriz Lopez Gutierrez, Angélica M. Almeyda Zambrano, Sandra L. Almeyda Zambrano, C. Gil, Stephanie A. Bohlman, Eduardo Avellan Arias, Guillermo Mulder, Clare N. Ols, Rodolfo Dirzo, Anneke M. DeLuycker, Karen D. Lewis, Eben N. Broadbent
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0241371

High nitrogen concentration alter microbial community in Allium fistulosum rhizosphere
Cited by: 10
Author(s): Chen Zhao, Haifeng Ni, Lin Zhao, Lin Zhou, Orlando Borrás‐Hidalgo, Rongzong Cui
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12862-014-0251-7

Body size and allometric shape variation in the molly Poecilia viviparaalong a gradient of salinity and predation
Cited by: 21
Author(s): Márcio S. Araújo, S. Iván Pérez, Maria Julia C Magazoni, Ana Cristina Petry
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0120608

The Source of the River as a Nursery for Microbial Diversity
Cited by: 42
Author(s): Luiz Felipe Valter de Oliveira, Rogério Margis
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0242138

Mycobiome changes in the vitreous of post fever retinitis patients
Cited by: 10
Author(s): Kotakonda Arunasri, Malleswarapu Mahesh, Gumpili Sai Prashanthi, Rajagopalaboopathi Jayasudha, Sama Kalyana Chakravarthy, Mudit Tyagi, Rajeev Reddy Pappuru, Sisinthy Shivaji
Software Mentions: 1
Published: almost 6 years ago

10.3390/nu13093159

Protein Intake, Metabolic Status and the Gut Microbiota in Different Ethnicities: Results from Two Independent Cohorts
Cited by: 5
Author(s): Pierre Bel Lassen, Ilias Attaye, Solia Adriouch, Mary Nicolaou, Judith Aron‐Wisnewsky, Trine Nielsen, Rima Chakaroun, Emmanuelle Le Chatelier, Kristoffer Forslund, Eugeni Belda, Peer Bork, Fredrik Bäckhed, M Stumvoll, Oluf Pedersen, Hilde Herrema, Albert K. Groen, Sara‐Joan Pinto‐Sietsma, Aeilko H. Zwinderman, Max Nieuwdorp, Karine Clément, on behalf of Metacardis Consortium
Software Mentions: 1
Published: about 5 years ago

10.3390/ijms22105162

Morphological and Metabolite Responses of Potatoes under Various Phosphorus Levels and Their Amelioration by Plant Growth-Promoting Rhizobacteria
Cited by: 16
Author(s): Leangsrun Chea, Birgit Pfeiffer, Dominik Schneider, Rolf Daniel, Elke Pawelzik, Marcel Naumann
Software Mentions: 1
Published: over 5 years ago

10.3390/nu13051738

Gut Microbiota Induced by Pterostilbene and Resveratrol in High-Fat-High-Fructose Fed Rats: Putative Role in Steatohepatitis Onset
Cited by: 15
Author(s): Iñaki Milton-Laskíbar, Laura Judith Marcos-Zambrano, Saioa Gómez‐Zorita, Alfredo Fernández‐Quintela, Enrique Carrillo de Santa Pau, J. Alfredo Martínéz, María Puy Portillo Baquedano
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0036290

Individual to Community-Level Faunal Responses to Environmental Change from a Marine Fossil Record of Early Miocene Global Warming
Cited by: 4
Author(s): Christina L. Belanger
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0184517

Improving the antiprotozoal effect of saponins in the rumen by combination with glycosidase inhibiting iminosugars or by modification of their chemical structure
Cited by: 13
Author(s): E. Ramos-Morales, Gabriel de la Fuente, Robert J. Nash, Radek Bragança, S. Duval, Marc E. Bouillon, Martina Lahmann, C. J. Newbold
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0211718

Genetic dissection of agronomic and quality traits based on association mapping and genomic selection approaches in durum wheat grown in Southern Spain
Cited by: 25
Author(s): Rosa Mérida-García, Guozheng Liu, Sang He, Victoria González-Dugo, Gabriel Dorado, Sergio Gálvez, Ignacio Solís, Pablo J. Zarco‐Tejada, Jochen C. Reif, Pilar Hernández
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0198087

Effects of straw return on bacterial communities in a wheat-maize rotation system in the North China Plain
Cited by: 22
Author(s): Dali Yu, Zhiguo Wen, Xiumei Li, Xiaojun Song, Huijun Wu, Peilong Yang
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-019-48944-1

Symbiotic effectiveness and ecologically adaptive traits of native rhizobial symbionts of Bambara groundnut (Vigna subterranea L. Verdc.) in Africa and their relationship with phylogeny
Cited by: 25
Author(s): Fadimata Y. I. Ibny, Sanjay K. Jaiswal, Mustapha Mohammed, Felix D. Dakora
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0056329

Bacterial Communities Associated with the Leaves and the Roots of Arabidopsis thaliana
Cited by: 588
Author(s): Natacha Bodenhausen, Matthew Horton, Joy Bergelson
Software Mentions: 1
Published: over 13 years ago

10.1186/1471-2148-10-245

Mating system drives negative associations between morphological features in Schistosomatidae
Cited by: 3
Author(s): Sophie Beltran‐Bech, Yves Desdevises, Julien Portela, Jérôme Boissier
Software Mentions: 1
Published: almost 17 years ago

10.1371/journal.pone.0063985

Symbiodinium Community Composition in Scleractinian Corals Is Not Affected by Life-Long Exposure to Elevated Carbon Dioxide
Cited by: 26
Author(s): Sam H. C. Noonan, Katharina Fabricius, Craig Humphrey
Software Mentions: 1
Published: over 13 years ago

10.1038/s41598-019-49608-w

Microbial characterization and fermentative characteristics of crop maize ensiled with unsalable vegetables
Cited by: 6
Author(s): Kristian Hooker, Daniel L. Forwood, Eleonora Caro, Yuxin Huo, Devin B. Holman, Alex V. Chaves, S. J. Meale
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0062885

Molecular Characterization of the Fecal Microbiota in Patients with Nonalcoholic Steatohepatitis – A Longitudinal Study
Cited by: 258
Author(s): Vincent Wai‐Sun Wong, Chi‐Shing Tse, Tommy Tsan-Yuk Lam, Grace Lai–Hung Wong, Angel Mei–Ling Chim, Winnie C.W. Chu, David W. K. Yeung, Patrick Tik Wan Law, Hoi Shan Kwan, Jun Yu, Joseph J.Y. Sung, Henry Lik–Yuen Chan
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0148607

Functional Resilience against Climate-Driven Extinctions – Comparing the Functional Diversity of European and North American Tree Floras
Cited by: 18
Author(s): Mario Liebergesell, Björn Reu, Ulrike Stahl, Martin Freiberg, Erik Welk, Jens Kattge, Johannes H. C. Cornelissen, Josep Peñuelas, Christian Wirth
Software Mentions: 1
Published: over 10 years ago

10.3390/ijms22126202

Comparative Study of Metagenomics and Metatranscriptomics to Reveal Microbiomes in Overwintering Pepper Fruits
Cited by: 6
Author(s): Yeonhwa Jo, Chang–Gi Back, Kook‐Hyung Kim, Hyosub Chu, Jeong Hun Lee, Sang Hyun Moh, Won Kyong Cho
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0221678

Immigration and establishment of Trypanosoma cruzi in Arequipa, Peru
Cited by: 7
Author(s): Alexander S. F. Berry, Renzo Salazar-Sánchez, Ricardo Castillo-Neyra, Katty Borrini-Mayorí, Claudia Chipana-Ramos, Melina Vargas-Maquera, Jenny Ancca-Juárez, César Náquira-Velarde, Michael Z. Levy, Dustin Brisson
Software Mentions: 1
Published: about 7 years ago

10.3390/ani10122341

Effects of Oat Hay Content in Diets on Nutrient Metabolism and the Rumen Microflora in Sheep
Cited by: 19
Author(s): Xiaopeng An, Lingyun Zhang, Jing Luo, Shengguo Zhao, Ting Jiao
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0037302

Salmonella Strains Isolated from Galápagos Iguanas Show Spatial Structuring of Serovar and Genomic Diversity
Cited by: 8
Author(s): Emily W. Lankau, Lenin Cruz Bedon, Roderick I. Mackie
Software Mentions: 1
Published: over 14 years ago

10.1186/s12862-019-1379-2

Phyloproteomic and functional analyses do not support a split in the genus Borrelia (phylum Spirochaetes)
Cited by: 11
Author(s): Agustı́n Estrada-Peña, Alejandro Cabezas-Cruz
Software Mentions: 1
Published: over 7 years ago

10.3390/nu7053279

Phylum Level Change in the Cecal and Fecal Gut Communities of Rats Fed Diets Containing Different Fermentable Substrates Supports a Role for Nitrogen as a Factor Contributing to Community Structure
Cited by: 15
Author(s): Martin Kalmokoff, Jeff Franklin, Nicholas Petronella, Judy Green, Stephen P. J. Brooks
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0078875

Exploratory Hydrocarbon Drilling Impacts to Arctic Lake Ecosystems
Cited by: 15
Author(s): Joshua R. Thienpont, Steven V. Kokelj, Jennifer B. Korosi, Elisa S. Cheng, Cyndy M. Desjardins, Linda E. Kimpe, Jules M. Blais, Michael F. J. Pisaric, John P. Smol
Software Mentions: 1
Published: almost 13 years ago

10.3390/nu12123749

The Specific Carbohydrate Diet and Diet Modification as Induction Therapy for Pediatric Crohn’s Disease: A Randomized Diet Controlled Trial
Cited by: 54
Author(s): David L. Suskind, Dale Lee, Young-Mo Kim, Ghassan Wahbeh, Namita Singh, Kimberly Braly, Mason Nuding, Carrie Nicora, Samuel O. Purvine, Mary Lipton, Janet K. Jansson, Karen E. Nelson
Software Mentions: 1
Published: almost 6 years ago

10.1186/s42523-021-00093-5

Gut microbiota of frugo-folivorous sifakas across environments
Cited by: 11
Author(s): Lydia K. Greene, Marina B. Blanco, Elodi Rambeloson, Karlis Graubics, Brian Fanelli, Rita R. Colwell, Christine M. Drea
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0147039

Exploration of Human Salivary Microbiomes—Insights into the Novel Characteristics of Microbial Community Structure in Caries and Caries-Free Subjects
Cited by: 37
Author(s): Jianye Zhou, Nan Jiang, Shaoguo Wang, Xiao-Pan Hu, Kangli Jiao, Xiangyi He, Zhiqiang Li, Jizeng Wang
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0039146

Habitat Loss other than Fragmentation per se Decreased Nuclear and Chloroplast Genetic Diversity in a Monoecious Tree
Cited by: 17
Author(s): Xin Zhang, Miaomiao Shi, Dong-Wei Shen, Xiao‐Yong Chen
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0049867

Different Distribution Patterns between Putative Ercoid Mycorrhizal and Other Fungal Assemblages in Roots of Rhododendron decorum in the Southwest of China
Cited by: 20
Author(s): Lifu Sun, Kequan Pei, Fang Wang, Qiong Ding, Yanhong Bing, Bo Gao, Zhenming Yu, Yu Liang, Keping Ma
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0202746

Effect of seawater temperature, pH, and nutrients on the distribution and character of low abundance shallow water benthic foraminifera in the Galápagos
Cited by: 15
Author(s): Alexander F. Humphreys, Jochen Halfar, James C. Ingle, Derek P. Manzello, Claire E. Reymond, Hildegard Westphal, Bernhard Riegl
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0232662

Changes of Fusarium oxysporum f.sp. lactucae levels and soil microbial community during soil biosolarization using chitin as soil amendment
Cited by: 18
Author(s): Tara E. Randall, Jesús D. Fernández-Bayo, Duff R. Harrold, Yigal Achmon, Kelley Hestmark, Thomas R. Gordon, J. J. Stapleton, Christopher W. Simmons, Jean S. VanderGheynst
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-019-50914-6

Fluoride contributes to the shaping of microbial community in high fluoride groundwater in Qiji County, Yuncheng City, China
Cited by: 17
Author(s): Xin Zhang, Xubo Gao, Chengcheng Li, Xuesong Luo, Yanxin Wang
Software Mentions: 1
Published: about 7 years ago