Ecosyste.ms: Papers

10.18632/oncotarget.20677

High-resolution microbiome profiling uncovers <i>Fusobacterium nucleatum</i>, <i>Lactobacillus gasseri/johnsonii</i>, and <i>Lactobacillus vaginalis</i> associated to oral and oropharyngeal cancer in saliva from HPV positive and HPV negative patients treated with surgery and chemo-radiation
Cited by: 63
Author(s): Rafael Guerrero-Preston, James R. White, Filipa Godoy-Vitorino, Arnold Rodríguez-Hilario, Kelvin Navarro, Herminio González, Christina Michailidi, Anne Jedlicka, Sierra Canapp, Jessica Bondy, Amanda Dziedzic, Bárbara Mora-Lagos, Gustavo Rivera-Alvarez, Carmen Ili-Gangas, Priscilla Brebi-Mieville, William H. Westra, Wayne M. Koch, Hyunseok Kang, Luigi Marchionni, Young Kim, David Sidransky
Software Mentions: 2
Published: about 7 years ago

10.3390/nu11061346

Modulation of Saliva Microbiota through Prebiotic Intervention in HIV-Infected Individuals
Cited by: 7
Author(s): Nuria Jiménez‐Hernández, Sergio Serrano‐Villar, Alba Domingo, Xavier Pons, Alejandro Artacho, Vicente Estrada, Andrés Moya, María José Gosalbes
Software Mentions: 2
Published: over 5 years ago

10.3390/nu13093290

Gut Microbiota Predicts Healthy Late-Life Aging in Male Mice
Cited by: 5
Author(s): Shanlin Ke, Sarah J. Mitchell, Michael R. MacArthur, Alice E. Kane, David Sinclair, Emily M. Venable, Katia S. Chadaideh, Rachel N. Carmody, Francine Grodstein, James R. Mitchell, Yangyu Liu
Software Mentions: 2
Published: about 3 years ago

10.3390/nu13030919

Enterolignan Production in a Flaxseed Intervention Study in Postmenopausal US Women of African Ancestry and European Ancestry
Cited by: 10
Author(s): Susan E. McCann, Meredith A.J. Hullar, David Tritchler, Eduardo Cortes-Gomez, Song Yao, Warren Davis, Tracey O’Connor, Deborah O. Erwin, Lilian U. Thompson, Yan Li, Johanna W. Lampe
Software Mentions: 2
Published: over 3 years ago

10.3390/nu13092975

Effects of a Postbiotic and Prebiotic Mixture on Suckling Rats’ Microbiota and Immunity
Cited by: 10
Author(s): Carla Morales-Ferré, Ignasi Azagra-Boronat, Malén Massot-Cladera, Sebastian Tims, Karen Knipping, Johan Garssen, Jan Knol, Àngels Franch, Maria J. Rodríguez-Lagunas, Francisco J. Pérez-Cano
Software Mentions: 2
Published: about 3 years ago

10.3390/nu12071954

Effects of Dietary Fibres on Acute Indomethacin-Induced Intestinal Hyperpermeability in the Elderly: A Randomised Placebo Controlled Parallel Clinical Trial
Cited by: 19
Author(s): John Peter Ganda Mall, Frida Fart, Julia A. Sabet, Carl Mårten Lindqvist, Ragnhild Nestestog, Finn Terje Hegge, Åsa V. Keita, Robert Jan Brummer, Ida Schoultz
Software Mentions: 2
Published: over 4 years ago

10.3390/nu13030713

Multiple Selection Criteria for Probiotic Strains with High Potential for Obesity Management
Cited by: 16
Author(s): Jeanne Alard, Benoît Cudennec, Denise Boutillier, Véronique Peucelle, Amandine Descat, Raphael Decoin, Sarah Kuylle, Amin Jablaoui, Moez Rhimi, Isabelle Wolowczuk, Bruno Pot, Anne Tailleux, Emmanuelle Maguin, Sophie Holowacz, Corinne Grangette
Software Mentions: 2
Published: over 3 years ago

10.3390/nu12040948

Bifidobacterium breve UCC2003 Exopolysaccharide Modulates the Early Life Microbiota by Acting as a Potential Dietary Substrate
Cited by: 19
Author(s): Deborah Püngel, Agatha Treveil, Matthew J. Dalby, Shabhonam Caim, Ian J. Colquhoun, Catherine Booth, Jennifer Ketskemety, Tamás Korcsmáros, Douwe van Sinderen, Melissa A. Lawson, Lindsay J. Hall
Software Mentions: 2
Published: over 4 years ago

10.3390/nu12113471

Associations between Pro- and Anti-Inflammatory Gastro-Intestinal Microbiota, Diet, and Cognitive Functioning in Dutch Healthy Older Adults: The NU-AGE Study
Cited by: 35
Author(s): Annick P M van Soest, Gerben D. A. Hermes, A. M. Berendsen, Ondine van de Rest, Erwin G. Zoetendal, Susana Fuentes, Aurelia Santoro, Claudio Franceschi, Lisette C. P. G. M. de Groot, Willem M. de Vos
Software Mentions: 2
Published: about 4 years ago

10.3390/nu10101403

Effects of Whole Milk Supplementation on Gut Microbiota and Cardiometabolic Biomarkers in Subjects with and without Lactose Malabsorption
Cited by: 25
Author(s): Xiaoqin Li, Jiawei Yin, Yalun Zhu, Xiaoqian Wang, Xiaoli Hu, Wei Bao, Yue Huang, Liangkai Chen, Sijing Chen, Wei Yang, Zhilei Shan, Liegang Liu
Software Mentions: 2
Published: about 6 years ago

10.3390/nu11123011

Effect of Short-Term Dietary Intervention and Probiotic Mix Supplementation on the Gut Microbiota of Elderly Obese Women
Cited by: 46
Author(s): Raffaella Cancello, Silvia Turroni, Simone Rampelli, Stefania Cattaldo, Marco Candela, Laila Cattani, Stefania Mai, Roberta Vietti, Massimo Scacchi, Patrizia Brigidi, Cecilia Invitti
Software Mentions: 2
Published: almost 5 years ago

10.3390/nu13020645

Resistant Starch Type 2 from Wheat Reduces Postprandial Glycemic Response with Concurrent Alterations in Gut Microbiota Composition
Cited by: 38
Author(s): Riley Hughes, William H Horn, Peter Finnegan, John W. Newman, Maria L. Marco, Nancy L. Keim, Mary E. Kable
Software Mentions: 2
Published: almost 4 years ago

10.3390/nu12072088

Sex-Specific Differences in the Gut Microbiome in Response to Dietary Fiber Supplementation in IL-10-Deficient Mice
Cited by: 16
Author(s): Zhengxiao Zhang, Jae Eun Hyun, Aducio Thiesen, Heekuk Park, Naomi Hotte, Hikaru Watanabe, Takanobu Higashiyama, Karen Madsen
Software Mentions: 2
Published: over 4 years ago

10.3390/nu13041272

Association of Gut Microbiome and Vitamin D Deficiency in Knee Osteoarthritis Patients: A Pilot Study
Cited by: 11
Author(s): Boopalan Ramasamy, Fabien Magne, Sujit Kumar Trıpathy, Giriprasad Venugopal, Diptasree Mukherjee, Ramadass Balamurugan
Software Mentions: 2
Published: over 3 years ago

10.3390/nu12072112

Effect of a Nutritional Intervention on the Intestinal Microbiota of Vertically HIV-Infected Children: The Pediabiota Study
Cited by: 9
Author(s): Talía Sainz, María José Gosalbes, Alba Talavera-Rodríguez, Nuria Jiménez‐Hernández, Luis Roberto Piña Prieto, Luis Escosa, Sara Guillén, José Tomás Ramos, María Ángeles Muñoz‐Fernández, Andrés Moya, Marı́a Luisa Navarro, María José Mellado, Sergio Serrano‐Villar
Software Mentions: 2
Published: over 4 years ago

10.3390/nu12020287

Murine Genetic Background Overcomes Gut Microbiota Changes to Explain Metabolic Response to High-Fat Diet
Cited by: 22
Author(s): Zahra Safari, Aurélia Bruneau, Magali Monnoye, Mahendra Mariadassou, Catherine Philippe, Kurt Zatloukal, Philippe Gérard
Software Mentions: 2
Published: almost 5 years ago

10.3389/fpls.2018.01723

Effect of Cadmium Accumulation on the Performance of Plants and of Herbivores That Cope Differently With Organic Defenses
Cited by: 17
Author(s): Diogo Prino Godinho, Helena Cristina Serrano, Anabela Bernardes da Silva, Cristina Branquinho, Sara Magalhães
Software Mentions: 1
Published: almost 6 years ago

10.3390/microorganisms8060834

Intercropping with Potato-Onion Enhanced the Soil Microbial Diversity of Tomato
Cited by: 27
Author(s): Naihui Li, Danmei Gao, Xingang Zhou, Shaocan Chen, Chunxia Li, Fengzhi Wu
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2020.00885

A Compost Treatment Acts as a Suppressive Agent in Phytophthora capsici – Cucurbita pepo Pathosystem by Modifying the Rhizosphere Microbiota
Cited by: 17
Author(s): Alessio Bellini, Ilario Ferrocino, Maria Alexandra Cucu, Massimo Pugliese, A. Garibaldi, M. L. Gullino
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2021.633982

Ultraviolet B Radiation Triggers DNA Methylation Change and Affects Foraging Behavior of the Clonal Plant Glechoma longituba
Cited by: 4
Author(s): Jiaxin Quan, Vít Latzel, Dan Tie, Yuhan Zhang, Zuzana Münzbergová, Yimin Chai, Xiao Liu, Ming Yue
Software Mentions: 1
Published: over 3 years ago

10.3389/fpls.2020.01225

Organic Fertilization Assembles Fungal Communities of Wheat Rhizosphere Soil and Suppresses the Population Growth of Heterodera avenae in the Field
Cited by: 11
Author(s): Wei Qiu, Huiqing Su, Yan Lu, Kaiyan Ji, Qian Liu, Heng Jian
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2020.01094

Effects of Enterobacter cloacae HG-1 on the Nitrogen-Fixing Community Structure of Wheat Rhizosphere Soil and on Salt Tolerance
Cited by: 23
Author(s): Chao Ji, Zhaoyang Liu, Liping Hao, Xin Song, Changdong Wang, Yue Liu, Huying Li, Chaohui Li, Qixiong Gao, Xunli Liu
Software Mentions: 1
Published: over 4 years ago

10.3389/fpls.2019.00039

Significance of Photosynthetic Characters in the Evolution of Asian Gnetum (Gnetales)
Cited by: 6
Author(s): Nan Deng, Chen Hou, Caixia Liu, Minghe Li, Igor V. Bartish, Yuxin Tian, Wei Chen, Changjian Du, Zeping Jiang, Shengqing Shi
Software Mentions: 1
Published: almost 6 years ago

10.3389/fpls.2017.01497

Mycorrhizal Associations and Trophic Modes in Coexisting Orchids: An Ecological Continuum between Auto- and Mixotrophy
Cited by: 48
Author(s): Hans Jacquemyn, Michael Waud, Rein Brys, Félix Lallemand, Pierre‐Emmanuel Courty, Alicja Robionek, Marc‐André Selosse
Software Mentions: 1
Published: about 7 years ago

10.1097/MPG.0000000000003234

Gut Microbiota Composition of Biliary Atresia Patients Before Kasai Portoenterostomy Associates With Long-term Outcome
Cited by: 7
Author(s): Daan B E van Wessel, Mark Nomden, Janneke L M Bruggink, Ruben H J de Kleine, Alexander Kurilshikov, Henkjan J. Verkade, Hermie J. M. Harmsen, Jan B F Hulscher
Software Mentions: 1
Published: over 3 years ago

10.3389/fpls.2021.614162

Sex-Specific Differences in the Physiological and Biochemical Performance of Arbuscular Mycorrhizal Fungi-Inoculated Mulberry Clones Under Salinity Stress
Cited by: 3
Author(s): Yanhong Wang, Nai‐Li Zhang, Minqiang Wang, Xiaobin He, Zhiqiang Lv, Wei Jia, Xiu Su, Aiping Wu, Yán Li
Software Mentions: 1
Published: over 3 years ago

10.3389/fpls.2017.00849

Variation of Soil Bacterial Communities in a Chronosequence of Rubber Tree (Hevea brasiliensis) Plantations
Cited by: 56
Author(s): Yujie Zhou, Jianhua Li, Cynthia Ross Friedman, Huafeng Wang
Software Mentions: 1
Published: over 7 years ago

10.3389/fpls.2018.01798

Root Growth, Water and Nitrogen Use Efficiencies in Winter Wheat Under Different Irrigation and Nitrogen Regimes in North China Plain
Cited by: 42
Author(s): Weixing Liu, J. Wang, Chenyang Wang, Geng Ma, Qiongru Wei, Hongfang Lü, Yingxin Xie, Dongyun Ma, Guozhang Kang
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0147100

Impact of Phanerochaete chrysosporium on the Functional Diversity of Bacterial Communities Associated with Decaying Wood
Cited by: 31
Author(s): Vincent Hervé, Elodie Ketter, Jean-Claude Pierrat, Éric Gelhaye, Pascale Frey‐Klett
Software Mentions: 1
Published: almost 9 years ago

10.3389/fpls.2016.00725

Proteomic Analysis of Differentially Expressed Proteins Involved in Peel Senescence in Harvested Mandarin Fruit
Cited by: 12
Author(s): Taotao Li, Jingying Zhang, Hong Zhu, Hongxia Qu, Shulin You, Xuewu Duan, Yueming Jiang
Software Mentions: 1
Published: over 8 years ago

10.3390/jpm11010035

Altered Gut Microbiota in Irritable Bowel Syndrome and Its Association with Food Components
Cited by: 23
Author(s): Zahra Amirkhanzadeh Barandouzi, Joochul Lee, Kendra Maas, Angela Starkweather, Xiaomei Cong
Software Mentions: 1
Published: almost 4 years ago

10.3389/fpls.2021.686965

Variation Patterns of Functional Trait Moments Along Geographical Gradients and Their Environmental Determinants in the Subtropical Evergreen Broadleaved Forests
Cited by: 7
Author(s): Caishuang Huang, Xu Yue, Runguo Zang
Software Mentions: 1
Published: over 3 years ago

10.3389/fmicb.2018.00797

Bacterial Diversity and Nitrogen Utilization Strategies in the Upper Layer of the Northwestern Pacific Ocean
Cited by: 33
Author(s): Yuanyuan Li, Xiao-Huang Chen, Zhang-Xian Xie, Dongxu Li, Pengfei Wu, Ling-Fen Kong, Lin Lin, Shuh‐Ji Kao, Dazhi Wang
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-020-60540-2

Integrated metabolome analysis reveals novel connections between maternal fecal metabolome and the neonatal blood metabolome in women with gestational diabetes mellitus
Cited by: 14
Author(s): Chun-Chao Zhao, Jun Ge, Xia Li, Ruifen Jiao, Yuan Li, Huili Quan, Jianguo Li, Qing Guo, Wenju Wang
Software Mentions: 1
Published: over 4 years ago

10.3389/fmicb.2017.00702

Relative Importance of Chemoautotrophy for Primary Production in a Light Exposed Marine Shallow Hydrothermal System
Cited by: 20
Author(s): Gonzalo V. Gomez‐Saez, Petra Pop Ristova, Stefan M. Sievert, Marcus Elvert, Kai‐Uwe Hinrichs, Solveig I Bühring
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2020.565806

Bacterial Community Characteristics and Enzyme Activities in Bothriochloa ischaemum Litter Over Progressive Phytoremediation Years in a Copper Tailings Dam
Cited by: 10
Author(s): Tong Jia, Yuwen Wang, Bo Chai
Software Mentions: 1
Published: almost 4 years ago

10.1371/journal.pone.0159035

Temporal Decay in Timber Species Composition and Value in Amazonian Logging Concessions
Cited by: 45
Author(s): Vanessa Richardson, Carlos A. Peres
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2018.00634

Urea Amendment Decreases Microbial Diversity and Selects for Specific Nitrifying Strains in Eight Contrasting Agricultural Soils
Cited by: 33
Author(s): Christopher Staley, Florence Breuillin‐Sessoms, Ping Wang, Thomas Kaiser, Rodney T. Venterea, Michael J. Sadowsky
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0007071

Disturbance Alters the Phylogenetic Composition and Structure of Plant Communities in an Old Field System
Cited by: 88
Author(s): Russell Dinnage
Software Mentions: 1
Published: about 15 years ago

10.3389/fmicb.2019.00063

Assessment of the Diversity of Fungal Community Composition Associated With Vachellia pachyceras and Its Rhizosphere Soil From Kuwait Desert
Cited by: 21
Author(s): M. K. Suleiman, Kingsley W. Dixon, Lucy Commander, Paul Nevill, Ali M. Quoreshi, N. R. Bhat, Anitha J. Manuvel, Mini T. Sivadasan
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2018.02565

The Effect of Captivity on the Dynamics of Active Bacterial Communities Differs Between Two Deep-Sea Coral Species
Cited by: 18
Author(s): Pierre E. Galand, Leïla Chapron, Anne-Leïla Meistertzheim, Erwan Péru, Franck Lartaud
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2016.01662

Bacterial Communities Associated with Four Cyanobacterial Genera Display Structural and Functional Differences: Evidence from an Experimental Approach
Cited by: 24
Author(s): Lin Zhu, Anouk Zancarini, Imen Louati, Silvia de Cesare, Clément Duval, Kevin Tambosco, Cécile Bernard, Didier Debroas, Lirong Song, Julie Leloup, Jean‐François Humbert
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2020.00628

Early and Short-Term Interventions in the Gut Microbiota Affects Lupus Severity, Progression, and Treatment in MRL/lpr Mice
Cited by: 20
Author(s): Yun Zhang, Qiuping Liu, Yiran Yu, Mingzhu Wang, Chengping Wen, Zhixing He
Software Mentions: 1
Published: over 4 years ago

10.3389/fmicb.2016.01893

Long-Term Application of Bioorganic Fertilizers Improved Soil Biochemical Properties and Microbial Communities of an Apple Orchard Soil
Cited by: 54
Author(s): Lei Wang, Fang Yang, E Yaoyao, Jun Yuan, Waseem Raza, Qiwei Huang, Qirong Shen
Software Mentions: 1
Published: almost 8 years ago

10.3389/fmicb.2017.00945

Microbial Community and Functional Structure Significantly Varied among Distinct Types of Paddy Soils But Responded Differently along Gradients of Soil Depth Layers
Cited by: 61
Author(s): Ren Yuan Bai, Jun‐Tao Wang, Ye Deng, Ji‐Zheng He, Kai Feng, Limei Zhang
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2015.01114

Effects of sludge inoculum and organic feedstock on active microbial communities and methane yield during anaerobic digestion
Cited by: 34
Author(s): David E. Wilkins, Subramanya Rao, Xiaoying Lü, Patrick K. H. Lee
Software Mentions: 1
Published: about 9 years ago

10.3389/fmicb.2016.01106

Biogeographic Distribution Patterns of Bacteria in Typical Chinese Forest Soils
Cited by: 70
Author(s): Zongwei Xia, Edith Bai, Qingkui Wang, Decai Gao, Jiang Zhou, Ping Jiang, Jiabing Wu
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2019.02953

High Diversity and Functional Complementation of Alimentary Canal Microbiota Ensure Small Brown Planthopper to Adapt Different Biogeographic Environments
Cited by: 14
Author(s): Wenwen Liu, Xiaowan Zhang, Nan Wu, Yingdang Ren, Xifeng Wang
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmicb.2015.00136

Elevated atmospheric CO2 levels affect community structure of rice root-associated bacteria
Cited by: 37
Author(s): Takashi Okubo, Dongyan Liu, Hirohito Tsurumaru, Seishi Ikeda, Susumu Asakawa, Takeshi Tokida, Kanako Tago, Masahito Hayatsu, Naohiro Aoki, Ken Ishimaru, Kazuhiro Ujiie, Yasuhiro Usui, Hirofumi Nakamura, Hidemitsu Sakai, Kentaro Hayashi, Toshihiro Hasegawa, Kiwamu Minamisawa
Software Mentions: 1
Published: almost 10 years ago

10.3389/fmicb.2019.00995

Oil Hydrocarbon Degradation by Caspian Sea Microbial Communities
Cited by: 26
Author(s): John I. Miller, Stephen M. Techtmann, Julian L. Fortney, Nagissa Mahmoudi, Dominique C. Joyner, Jiang Liu, Scott W. Olesen, Eric J. Alm, Adolfo Maza, Piero R. Gardinali, Nargiz GaraJayeva, Faig S. Askerov, Terry C. Hazen
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2018.01230

Time Series Analysis of the Microbiota of Children Suffering From Acute Infectious Diarrhea and Their Recovery After Treatment
Cited by: 28
Author(s): Ener Çağrı Dinleyici, Daniel Martínez-Martínez, Ateş Kara, Adem Karbuz, Nazan Dalgıç, Özge Metin, Ahmet Sami Yazar, Şirin Güven, Zafer Kurugöl, Özden Türel, Mehmet Küçükkoç, Olcay Yasa, Makbule Eren, Metehan Özen, Jose Manuel Martí, Carlos P. Garay, Yvan Vandenplas, Andrés Moya
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2013.00207

Microbial habitat connectivity across spatial scales and hydrothermal temperature gradients at Guaymas Basin
Cited by: 20
Author(s): Stefanie Meyer, Gunter Wegener, Karen G. Lloyd, Andreas Teske, Antje Boetius, Alban Ramette
Software Mentions: 1
Published: almost 12 years ago

10.1038/s41598-020-62411-2

Microbial Diversity and Metabolic Potential in the Stratified Sansha Yongle Blue Hole in the South China Sea
Cited by: 24
Author(s): Pinjing He, Lian Xie, Xuelei Zhang, Li Jiang, Xuezheng Lin, Xinming Pu, Cuiling Yuan, Zhen Tian, Jie Li
Software Mentions: 1
Published: over 4 years ago

10.1093/plankt/fbab007

Seasonal dynamics and life histories of three sympatric species of <i>Pseudocalanus</i> in two Svalbard fjords
Cited by: 7
Author(s): E. A. Ershova, Margot Ulfsdatter Nyeggen, D. A. Yurikova, Janne E. Søreide
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0023445

Tree Resin Composition, Collection Behavior and Selective Filters Shape Chemical Profiles of Tropical Bees (Apidae: Meliponini)
Cited by: 35
Author(s): Sara D. Leonhardt, Thomas Schmitt, Nico Blüthgen
Software Mentions: 1
Published: over 13 years ago

10.1098/rsif.2016.0296

Detailed temporal structure of communication networks in groups of songbirds
Cited by: 17
Author(s): Dan Stowell, Lisa Gill, David F. Clayton
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2017.01550

Heat Stress Dictates Microbial Lipid Composition along a Thermal Gradient in Marine Sediments
Cited by: 38
Author(s): Miriam Sollich, Marcos Yukio Yoshinaga, Stefan Häusler, Roy E. Price, Kai‐Uwe Hinrichs, Solveig I Bühring
Software Mentions: 1
Published: over 7 years ago

10.3389/fmicb.2016.01032

Effects of Short-Term Warming and Altered Precipitation on Soil Microbial Communities in Alpine Grassland of the Tibetan Plateau
Cited by: 33
Author(s): Kaoping Zhang, Yu Shi, Xin Jing, Jin‐Sheng He, Run‐Cang Sun, Yunfeng Yang, Ashley Shade, Haiyan Chu
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-020-60292-z

Conserved in-ovo cranial ossification sequences of extant saurians allow estimation of embryonic dinosaur developmental stages
Cited by: 14
Author(s): Kimberley E. J. Chapelle, Vincent Fernández, Jonah N. Choiniere
Software Mentions: 1
Published: over 4 years ago

10.3389/fmicb.2015.01149

Responses of soil microeukaryotic communities to short-term fumigation-incubation revealed by MiSeq amplicon sequencing
Cited by: 19
Author(s): Chunye Lin, Jianming Xu, Youzhi Feng, Juntao Wang, Yongjie Yu, Philip C. Brookes
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0044578

At Limits of Life: Multidisciplinary Insights Reveal Environmental Constraints on Biotic Diversity in Continental Antarctica
Cited by: 51
Author(s): Catarina Magalhães, Mark I. Stevens, S. Craig Cary, Becky A. Ball, B. C. Storey, Diana H. Wall, Roman Türk, Ulrike Ruprecht
Software Mentions: 1
Published: about 12 years ago

10.3389/fmicb.2016.01535

Environmental Drivers of Differences in Microbial Community Structure in Crude Oil Reservoirs across a Methanogenic Gradient
Cited by: 30
Author(s): Jennifer L. Shelton, Denise M. Akob, Jennifer C. McIntosh, Noah Fierer, John R. Spear, Peter D. Warwick, John E. McCray
Software Mentions: 1
Published: about 8 years ago

10.1186/s12967-020-02282-3

Characteristics of the urinary microbiome in kidney stone patients with hypertension
Cited by: 27
Author(s): Fengping Liu, Nan Zhang, Jiang Peng, Qixiao Zhai, Chen Li, Deshui Yu, Yan Wang, Yuwei Zhang, Longxian Lv, Xinyu Xu, Na Feng
Software Mentions: 1
Published: over 4 years ago

10.1167/jov.20.13.12

If painters give you lemons, squeeze the knowledge out of them. A study on the visual perception of the translucent and juicy appearance of citrus fruits in paintings
Cited by: 5
Author(s): Francesca Di Cicco, Maarten Wijntjes, Sylvia C. Pont
Software Mentions: 1
Published: almost 4 years ago

10.3389/fmicb.2021.611951

Using Structural Equation Modeling to Understand Interactions Between Bacterial and Archaeal Populations and Volatile Fatty Acid Proportions in the Rumen
Cited by: 8
Author(s): Veronica Kaplan-Shabtai, Nagaraju Indugu, Meagan L. Hennessy, Bonnie Vecchiarelli, Joseph S. Bender, Darko Stefanovski, Camila Flávia de Assis Lage, S.E. Räisänen, A. Melgar, K. Nedelkov, M. E. Fetter, A. Corujo Fernández, Addison Spitzer, A.N. Hristov, Dipti Pitta
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-020-63639-8

Microbial carbon source utilization in rice rhizosphere and nonrhizosphere soils with short-term manure N input rate in paddy field
Cited by: 15
Author(s): Haiming Tang, Xiaoping Xiao, Chao Li, Xiaochen Pan, Kun Cheng, Weiyan Li, Ke Wang
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0094643

Importance of Saprotrophic Freshwater Fungi for Pollen Degradation
Cited by: 88
Author(s): Christian Wurzbacher, Stefan Rösel, Anna Rychła, Hans‐Peter Grossart
Software Mentions: 1
Published: over 10 years ago

10.3389/fmicb.2020.00829

Effects of Different Vegetable Rotations on Fungal Community Structure in Continuous Tomato Cropping Matrix in Greenhouse
Cited by: 26
Author(s): Jian Lyu, Li Jin, Ning Jin, Jianming Xie, Xuemei Xiao, Linli Hu, Zhongqi Tang, Yue Wu, Lijuan Niu, Jiangnan Yu
Software Mentions: 1
Published: over 4 years ago

10.3389/fmicb.2015.00022

Evident bacterial community changes but only slight degradation when polluted with pyrene in a red soil
Cited by: 75
Author(s): Guohao Ren, Wenjie Ren, Ying Teng, Zhengao Li
Software Mentions: 1
Published: almost 10 years ago

10.3389/fmicb.2018.03122

Niche Separation of Ammonia Oxidizers in Mudflat and Agricultural Soils Along the Yangtze River, China
Cited by: 3
Author(s): Xue Zhou, Bolun Li, Zhiying Guo, Zhiyuan Wang, Jian Luo, Chunhui Lu
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2017.00764

Microbial Community Response to Simulated Petroleum Seepage in Caspian Sea Sediments
Cited by: 18
Author(s): Marion Stagars, Sonakshi Mishra, Tina Treude, Rudolf Amann, Katrin Knittel
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-020-63578-4

Anthropogenic Anoxic History of the Tuvalu Atoll Recorded as Annual Black Bands in Coral
Cited by: 5
Author(s): N. Nakamura, Hajime Kayanne, Yoshio Takahashi, Michinari Sunamura, Go Hosoi, Hiroya Yamano
Software Mentions: 1
Published: over 4 years ago

10.3389/fmicb.2019.00253

Anaerobic Degradation of Sulfated Polysaccharides by Two Novel Kiritimatiellales Strains Isolated From Black Sea Sediment
Cited by: 36
Author(s): Daan M. van Vliet, Susakul Palakawong Na Ayudthaya, Sally Diop, Laura Villanueva, Alfons Johannes Maria Stams, Irene Sánchez‐Andrea
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2012.00376

The effect of marination on lactic acid bacteria communities in raw broiler fillet strips
Cited by: 17
Author(s): Tea Nieminen, Hanna Välitalo, Elina Säde, Anne Paloranta, Kaisa Koskinen, Johanna Björkroth
Software Mentions: 1
Published: almost 13 years ago

10.7717/peerj.8307

Morphological variation of leaf traits in the<i>Ternstroemia lineata</i>species complex (Ericales: Penthaphylacaceae) in response to geographic and climatic variation
Cited by: 17
Author(s): Othón Alcántara-Ayala, Ken Oyama, César A. Ríos-Muñoz, Gerardo Rivas, Santiago Ramírez‐Barahona, Isolda Luna‐Vega
Software Mentions: 1
Published: almost 5 years ago

10.1038/s41598-020-65557-1

Seasonal and spatial dynamics of the planktonic trophic biomarkers in the Strait of Georgia (northeast Pacific) and implications for fish
Cited by: 18
Author(s): David Costalago, Ian Forster, Nina Nemcek, Chrys Neville, R. Ian Perry, Kathy L. Young, Brian P. V. Hunt
Software Mentions: 1
Published: over 4 years ago

10.7717/peerj.2226

Rapid response of arbuscular mycorrhizal fungal communities to short-term fertilization in an alpine grassland on the Qinghai-Tibet Plateau
Cited by: 26
Author(s): Xingjia Xiang, Sean M. Gibbons, Jin‐Sheng He, Chao Wang, Dan He, Qian Li, Yingying Ni, Haiyan Chu
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2019.03020

Different Effects of Premature Infant Formula and Breast Milk on Intestinal Microecological Development in Premature Infants
Cited by: 17
Author(s): Cheng Chen, Qiuyue Yin, Hui Wu, Long Cheng, Jung Il Kwon, Juan Jin, Tao Han, Huilian Che
Software Mentions: 1
Published: almost 5 years ago

10.7717/peerj.374

How long is enough to detect terrestrial animals? Estimating the minimum trapping effort on camera traps
Cited by: 58
Author(s): Xingfeng Si, Roland Kays, Ping Ding
Software Mentions: 1
Published: over 10 years ago

10.3390/microorganisms9051071

In Vitro Fermentation Characteristics and Fiber-Degrading Enzyme Kinetics of Cellulose, Arabinoxylan, β-Glucan and Glucomannan by Pig Fecal Microbiota
Cited by: 19
Author(s): Yu Bai, Xingjian Zhou, Na Li, Jinbiao Zhao, Yue Hao, Shuai Zhang, Hsi-Chi Yang, Yu Pi, Shiyu Tao, Dandan Han, Shuai Zhang, Junjun Wang
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-020-66306-0

Can information from citizen science data be used to predict biodiversity in stormwater ponds?
Cited by: 3
Author(s): Frank Johansson, Jani Heino, Paul Coiffard, Richard Svanbäck, J. Wester, Luis Maurício Bini
Software Mentions: 1
Published: over 4 years ago

10.3389/fmicb.2021.630302

Impact of Intercropping on the Diazotrophic Community in the Soils of Continuous Cucumber Cropping Systems
Cited by: 5
Author(s): Huan Gao, Sen Li, Fengzhi Wu
Software Mentions: 1
Published: over 3 years ago

10.1038/s41598-020-66703-5

The breeding strategy of female jumbo squid Dosidicus gigas: energy acquisition and allocation
Cited by: 13
Author(s): Xinjun Chen, Fei Han, Kai Zhu, André E. Punt, Dongming Lin
Software Mentions: 1
Published: over 4 years ago

10.3389/fmicb.2019.01951

Metagenomic Analysis of the Diversity of DNA Viruses in the Surface and Deep Sea of the South China Sea
Cited by: 32
Author(s): Yantao Liang, Long Wang, Zengmeng Wang, Jiulong Zhao, Qiaoqiao Yang, Min Wang, Kaiguang Yang, Lihua Zhang, Nianzhi Jiao, Yongyu Zhang
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms8040598

Effect of Cobalt, Nickel, and Selenium/Tungsten Deficiency on Mesophilic Anaerobic Digestion of Chemically Defined Soluble Organic Compounds
Cited by: 18
Author(s): Luka Šafarič, Sepehr Shakeri Yekta, Bo Svensson, Anna Schnürer, David Bastviken, Annika Björn
Software Mentions: 1
Published: over 4 years ago

10.1038/s41598-020-66527-3

Walls offer potential to improve urban biodiversity
Cited by: 7
Author(s): Chundi Chen, Longfei Mao, Yonggui Qiu, Jian Cui, Yuncai Wang
Software Mentions: 1
Published: over 4 years ago

10.3389/fmicb.2017.01644

Seasonality Affects the Diversity and Composition of Bacterioplankton Communities in Dongjiang River, a Drinking Water Source of Hong Kong
Cited by: 34
Author(s): Wei Sun, Chunyu Xia, Meiying Xu, Jun Guo, Guoping Sun
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2018.01968

Effects of Reforestation on the Structure and Diversity of Bacterial Communities in Subtropical Low Mountain Forest Soils
Cited by: 9
Author(s): Yu‐Te Lin, William B. Whitman, David C. Coleman, Chih‐Yu Chiu
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2020.00924

Indigenous Bacteria Have High Potential for Promoting Salix integra Thunb. Remediation of Lead-Contaminated Soil by Adjusting Soil Properties
Cited by: 7
Author(s): Xiaoyun Niu, Jian Zhou, Xiaona Wang, Xiaoyu Su, Shunda Du, Yufei Zhu, Jinyu Yang, Huang DaZhuang
Software Mentions: 1
Published: over 4 years ago

10.3389/fmicb.2019.01646

First Insights Into Bacterial Gastrointestinal Tract Communities of the Eurasian Beaver (Castor fiber)
Cited by: 3
Author(s): Rahadian Pratama, Dominik Schneider, Tim Böer, Rolf Daniel
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2016.01303

Chronic Polyaromatic Hydrocarbon (PAH) Contamination Is a Marginal Driver for Community Diversity and Prokaryotic Predicted Functioning in Coastal Sediments
Cited by: 31
Author(s): Mathilde Jeanbille, Jérôme Gury, Robert Duran, Jacek Tronczyński, Jean-François Ghiglione, Hélène Agogué, Olfa Ben Saïd, Najwa Taïb, Didier Debroas, Cédric Garnier, Jean‐Christophe Auguet
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2019.01698

Phytoplankton Community Structure Is Driven by Stratification in the Oligotrophic Mediterranean Sea
Cited by: 40
Author(s): Catalina Mena, Patricia Reglero, Manuel Hidalgo, Eva Sintes, Rocío Santiago, Melissa Martín, G. Moyà, Rosa Balbín
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2020.571209

Alkaline Phosphomonoesterase-Harboring Microorganisms Mediate Soil Phosphorus Transformation With Stand Age in Chinese Pinus massoniana Plantations
Cited by: 3
Author(s): Yueming Liang, LI Ming-jin, Fu Sheng Pan, Jiangming Ma, Zhangqi Yang, Ling Tian-wang, Jiashuang Qin, Shaohao Lu, Fengyue Zhong, Zunrong Song
Software Mentions: 1
Published: almost 4 years ago

10.3389/fmicb.2017.02134

Arbuscular Mycorrhizal Fungal Community Composition in Carludovica palmata, Costus scaber and Euterpe precatoria from Weathered Oil Ponds in the Ecuadorian Amazon
Cited by: 21
Author(s): Mónica Garcés-Ruiz, Carolina Senés‐Guerrero, Stéphane Declerck, Sylvie Cranenbrouck
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2016.01510

Differences in the Composition of Archaeal Communities in Sediments from Contrasting Zones of Lake Taihu
Cited by: 29
Author(s): Xianfang Fan, Peng Xing
Software Mentions: 1
Published: about 8 years ago

10.7717/peerj.9341

Double lives: transfer of fungal endophytes from leaves to woody substrates
Cited by: 25
Author(s): Aaron A. Nelson, Roo Vandegrift, George C. Carroll, Brad A. Roy
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-020-67528-y

Effects of biochar-based controlled release nitrogen fertilizer on nitrogen-use efficiency of oilseed rape (Brassica napus L.)
Cited by: 73
Author(s): Jiayuan Liao, Xiangrong Liu, Ang Hu, Haixing Song, Xiuzhi Chen, Zhenhua Zhang
Software Mentions: 1
Published: over 4 years ago

10.3389/fmicb.2020.01520

Microbial Community Structure in Arctic Lake Sediments Reflect Variations in Holocene Climate Conditions
Cited by: 6
Author(s): Tor Einar Møller, Willem van der Bilt, Desiree L. Roerdink, Steffen Leth Jørgensen
Software Mentions: 1
Published: over 4 years ago

10.3389/fmicb.2019.01220

Land Use Change and Water Quality Use for Irrigation Alters Drylands Soil Fungal Community in the Mezquital Valley, Mexico
Cited by: 15
Author(s): Kathia Lüneberg, Dominik Schneider, Nicole Brinkmann, Christina Siebe, Rolf Daniel
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-68104-0

Disturbance history can increase functional stability in the face of both repeated disturbances of the same type and novel disturbances
Cited by: 5
Author(s): Sophia Elise Renes, Johanna Sjöstedt, Ingo Fetzer, Silke Langenheder
Software Mentions: 1
Published: over 4 years ago