cran: vegan | Projects | Ecosyste.ms: Papers

10.1128/mSystems.00869-19

FORENSIC: an Online Platform for Fecal Source Identification
Cited by: 12
Author(s): Adélaïde Roguet, Özcan C. Esen, A. Murat Eren, Ryan J. Newton, Sandra L. McLellan
Software Mentions: 2
Published: over 4 years ago

10.1038/srep22806

Bacterial associations reveal spatial population dynamics in Anopheles gambiae mosquitoes
Cited by: 94
Author(s): Moritz Buck, Louise K. J. Nilsson, Carl Brunius, Roch K. Dabiré, Richard Hopkins, Olle Terenius
Software Mentions: 2
Published: over 8 years ago

10.1002/ece3.940

Timing is everything: priority effects alter community invasibility after disturbance
Cited by: 41
Author(s): Celia C. Symons, Shelley E. Arnott
Software Mentions: 2
Published: almost 11 years ago

10.3389/fmicb.2019.00241

Factors Influencing Leaf- and Root-Associated Communities of Bacteria and Fungi Across 33 Plant Orders in a Grassland
Cited by: 36
Author(s): Hirokazu Toju, Hiroko Kurokawa, Tanaka Kenta
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0111043

Hydrostatic Pressure and Temperature Effects on the Membranes of a Seasonally Migrating Marine Copepod
Cited by: 32
Author(s): David W. Pond, Geraint A. Tarling, Daniel J. Mayor
Software Mentions: 2
Published: about 10 years ago

10.7717/peerj.6854

Comparison of microbial community structures in soils with woody organic amendments and soils with traditional local organic amendments in Ningxia of Northern China
Cited by: 7
Author(s): Zhigang Li, Kaiyang Qiu, Rebecca L. Schneider, Stephen J. Morreale, Yi Xie
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0137401

Cloacal Microbiome Structure in a Long-Distance Migratory Bird Assessed Using Deep 16sRNA Pyrosequencing
Cited by: 65
Author(s): Jakub Kreisinger, Dagmar Čížková, Lucie Kropáčková, Tomáš Albrecht
Software Mentions: 2
Published: about 9 years ago

10.1002/mbo3.789

Characterizing the microbiota in gastrointestinal tract segments of Rhabdophis subminiatus: Dynamic changes and functional predictions
Cited by: 17
Author(s): Wenjiao Tang, Guangxiang Zhu, Qian Shi, Shijun Yang, Tianyuan Ma, Suchismita Mishra, Anxiang Wen, Huailiang Xu, Qin Wang, Yanzhi Jiang, Jiayun Wu, Meng Xie, Yongfang Yao, Diyan Li
Software Mentions: 2
Published: over 5 years ago

10.1002/ece3.7532

Mixed plantations of Metasequoia glyptostroboides and Bischofia polycarpa change soil fungal and archaeal communities and enhance soil phosphorus availability in Shanghai, China
Cited by: 7
Author(s): Weiwei Zhang, Wen Li, Shan-Wen He, Chen Qing-chu, Jigang Han, Zhang Qingfei
Software Mentions: 2
Published: over 3 years ago

10.1002/ece3.5523

Grassland harvesting alters ant community trophic structure: An isotopic study in tallgrass prairies
Cited by: 5
Author(s): Tania Kim, Savannah L. Bartel, Claudio Gratton
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2015.01519

Bacterial Diversity in Submarine Groundwater along the Coasts of the Yellow Sea
Cited by: 17
Author(s): Qi Ye, Jianan Liu, Jinzhou Du, Jing Zhang
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.pone.0143566

Diversity and Interactions of Wood-Inhabiting Fungi and Beetles after Deadwood Enrichment
Cited by: 16
Author(s): Andreas Floren, Dirk Krüger, Tobias Müller, Marcus Dittrich, Renate Rudloff, Björn Hoppe, K. Eduard Linsenmair
Software Mentions: 2
Published: about 9 years ago

10.1002/ece3.7652

A dynamic history of admixture from Mediterranean and Carpathian glacial refugia drives genomic diversity in the bank vole
Cited by: 6
Author(s): Michaela Horníková, Silvia Marková, Hayley C. Lanier, Jeremy B. Searle, Petr Kotlı́k
Software Mentions: 2
Published: over 3 years ago

10.1093/aobpla/plv126

Constraints on coastal dune invasion for a notorious plant invader
Cited by: 2
Author(s): Alden B. Griffith, Tania Ahmed, Abigail L. G. Hildner, Shivani Kuckreja, Shuangxou Long
Software Mentions: 2
Published: almost 10 years ago

10.1002/mbo3.852

Genomic ecology of Marine Group II, the most common marine planktonic Archaea across the surface ocean
Cited by: 21
Author(s): Olivier Pereira, Corentin Hochart, Jean‐Christophe Auguet, Didier Debroas, Pierre E. Galand
Software Mentions: 2
Published: over 5 years ago

10.1002/ece3.2283

Facing environmental predictability with different sources of epigenetic variation
Cited by: 52
Author(s): Christelle Leung, Sophie Breton, Bernard Angers
Software Mentions: 2
Published: over 8 years ago

10.1093/aob/mcv048

The effect of polyploidy and hybridization on the evolution of floral colour inNicotiana(Solanaceae)
Cited by: 35
Author(s): Elizabeth W. McCarthy, Sarah E. J. Arnold, Lars Chittka, Steven C. Le Comber, Robert Verity, Steven Dodsworth, Sandra Knapp, Laura J. Kelly, Mark W. Chase, Ian Thomas Baldwin, Aleš Kovařı́k, Corinne Mhiri, L. M. Taylor, Andrew R. Leitch
Software Mentions: 2
Published: over 9 years ago

10.1002/mbo3.909

Large‐scale distribution of bacterial communities in the Qaidam Basin of the Qinghai–Tibet Plateau
Cited by: 13
Author(s): Rui Xing, Qingbo Gao, Faqi Zhang, Jiuli Wang, Shilong Chen
Software Mentions: 2
Published: over 5 years ago

10.1093/femsre/fuab018

Ecological and Evolutionary responses to Antibiotic Treatment in the Human Gut Microbiota
Cited by: 17
Author(s): Joseph Hugh Pennycook, Pauline D. Scanlan
Software Mentions: 2
Published: over 3 years ago

10.1007/s12223-020-00828-y

Denaturing gradient gel electrophoresis and multi-SIR profiles of soil microbial communities from a karst doline at Aggtelek National Park, Hungary
Cited by: 3
Author(s): Márton Mucsi, Gergely Krett, Tibor Szili‐Kovács, János Móga, Andrea K. Borsodi
Software Mentions: 2
Published: about 4 years ago

10.1093/aob/mcw072

Evolution and diversity of floral scent chemistry in the euglossine bee-pollinated orchid genusGongora
Cited by: 42
Author(s): Molly C Hetherington-Rauth, Santiago R. Ramírez
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0062763

Humans as Long-Distance Dispersers of Rural Plant Communities
Cited by: 38
Author(s): Alistair G. Auffret, Sara A. O. Cousins
Software Mentions: 2
Published: over 11 years ago

10.7717/peerj.3743

Growth, stoichiometry and cell size; temperature and nutrient responses in haptophytes
Cited by: 18
Author(s): Lars Fredrik Skau, Tom Andersen, Jan‐Erik Thrane, Dag O. Hessen
Software Mentions: 2
Published: about 7 years ago

10.1038/ismej.2015.101

Phylogenetic congruence and ecological coherence in terrestrial Thaumarchaeota
Cited by: 73
Author(s): Eduard Vico Oton, Christopher Quince, Graeme W. Nicol, James I. Prosser, Cécile Gubry‐Rangin
Software Mentions: 2
Published: over 9 years ago

10.3390/foods10081791

Characterization and Classification of Cocoa Bean Shells from Different Regions of Venezuela Using HPLC-PDA-MS/MS and Spectrophotometric Techniques Coupled to Chemometric Analysis
Cited by: 7
Author(s): Letricia Barbosa-Pereira, Simona Belviso, Ilario Ferrocino, Olga Rojo-Poveda, Giuseppe Zeppa
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0066109

Plant and Bird Presence Strongly Influences the Microbial Communities in Soils of Admiralty Bay, Maritime Antarctica
Cited by: 26
Author(s): Lia Cardoso Rocha Saraiva Teixeira, Etienne Yeargeau, Fabiano de Carvalho Balieiro, Marisa de Cássia Píccolo, Raquel S. Peixoto, Charles W. Greer, Alexandre Soares Rosado
Software Mentions: 2
Published: over 11 years ago

10.7717/peerj.2459

Spatial heterogeneity of physicochemical properties explains differences in microbial composition in arid soils from Cuatro Cienegas, Mexico
Cited by: 22
Author(s): Silvia Pajares, Ana E. Escalante, Ana M. Noguez, Felipe García‐Oliva, Celeste Martínez-Piedragil, Silke Cram, Luis E. Eguiarte, Valeria Souza
Software Mentions: 2
Published: about 8 years ago

10.3389/fmicb.2020.01587

Bacterial Communities of the Canola Rhizosphere: Network Analysis Reveals a Core Bacterium Shaping Microbial Interactions
Cited by: 13
Author(s): Jean-Baptiste Floc’h, Chantal Hamel, Newton Z. Lupwayi, K. Neil Harker, Mohamed Hijri, Marc St‐Arnaud
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0041938

Communities of Arbuscular Mycorrhizal Fungi Detected in Forest Soil Are Spatially Heterogeneous but Do Not Vary throughout the Growing Season
Cited by: 137
Author(s): John Davison, Maarja Öpik, Martin Zobel, Martti Vasar, Madis Metsis, Mari Moora
Software Mentions: 2
Published: over 12 years ago

10.1002/mbo3.725

Comparative metagenomics of the gut microbiota in wild greylag geese (Anser anser) and ruddy shelducks (Tadorna ferruginea)
Cited by: 13
Author(s): Wang Wen, Sisi Zheng, Laixing Li, Yongsheng Yang, Yingbao Liu, Aizhen Wang, Kirill Sharshov, Yao Li
Software Mentions: 2
Published: about 6 years ago

10.1111/fwb.13593

Effects of terrigenous organic substrates and additional phosphorus on bacterioplankton metabolism and exoenzyme stoichiometry
Cited by: 4
Author(s): Tz‐Ching Yeh, Kathrin Krennmayr, Chun Yen Liao, Elisabet Ejarque, Jasmin Schomakers, Jr‐Chuan Huang, Franz Zehetner, Thomas Hein
Software Mentions: 2
Published: over 4 years ago

10.7717/peerj.5754

Residue management alters microbial diversity and activity without affecting their community composition in black soil, Northeast China
Cited by: 10
Author(s): Song Gu, Xingjun Guo, Yuetong Cai, Zehui Zhang, Shuai Wu, Xin Li, Huihui Zhang, Wei Yang
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0142097

Lung Microbiota Changes Associated with Chronic Pseudomonas aeruginosa Lung Infection and the Impact of Intravenous Colistimethate Sodium
Cited by: 10
Author(s): David Collie, Laura Glendinning, John R. W. Govan, Steven H. Wright, Elisabeth M. Thornton, Peter Tennant, C. Doherty, Gerry McLachlan
Software Mentions: 2
Published: about 9 years ago

10.3389/fnagi.2017.00298

Age Drives Distortion of Brain Metabolic, Vascular and Cognitive Functions, and the Gut Microbiome
Cited by: 84
Author(s): Jared D. Hoffman, Ishita Parikh, Stefan J. Green, George E. Chlipala, Robert P. Mohney, Mignon Keaton, Björn Bauer, Anika M.S. Hartz, Ai Ling Lin
Software Mentions: 2
Published: about 7 years ago

10.3389/frai.2019.00029

Longitudinal Analysis of Tactical Strategy in the Men's Division of the Ultimate Fighting Championship
Cited by: 1
Author(s): Lachlan P. James, Alice Sweeting, Vincent G. Kelly, Sam Robertson
Software Mentions: 2
Published: almost 5 years ago

10.3389/fnbeh.2018.00140

Effects of Sub-Chronic MPTP Exposure on Behavioral and Cognitive Performance and the Microbiome of Wild-Type and mGlu8 Knockout Female and Male Mice
Cited by: 30
Author(s): Eileen Ruth S. Torres, Tunde Akinyeke, Keaton Stagaman, Robert M. Duvoisin, Charles K. Meshul, Thomas J. Sharpton, Jacob Raber
Software Mentions: 2
Published: over 6 years ago

10.3389/fbioe.2017.00008

A Clostridium Group IV Species Dominates and Suppresses a Mixed Culture Fermentation by Tolerance to Medium Chain Fatty Acids Products
Cited by: 63
Author(s): Stephen Andersen, Vicky De Groof, Way Cern Khor, Hugo Roume, Ruben Props, Marta Coma, Korneel Rabaey
Software Mentions: 2
Published: almost 8 years ago

10.3389/fbioe.2021.575724

Effects of Banana Resistant Starch on the Biochemical Indexes and Intestinal Flora of Obese Rats Induced by a High-Fat Diet and Their Correlation Analysis
Cited by: 24
Author(s): Jinfeng Fu, Yuting Wang, Simin Tan, Juan Wang
Software Mentions: 2
Published: almost 4 years ago

10.3389/fbioe.2015.00141

Fragmentation and Coverage Variation in Viral Metagenome Assemblies, and Their Effect in Diversity Calculations
Cited by: 28
Author(s): Rodrigo García-López, Jorge F. Vázquez-Castellanos, Andrés Moya
Software Mentions: 2
Published: about 9 years ago

10.3389/fmicb.2018.01392

Antarctic Cryptoendolithic Fungal Communities Are Highly Adapted and Dominated by Lecanoromycetes and Dothideomycetes
Cited by: 49
Author(s): Claudia Coleine, Jason E. Stajich, Laura Zucconi, Silvano Onofri, Nuttapon Pombubpa, Eleonora Egidi, Ashley E. Franks, Pietro Buzzini, Laura Selbmann
Software Mentions: 2
Published: over 6 years ago

10.1002/mbo3.676

Tillage intensity and pasture in rotation effectively shape soil microbial communities at a landscape scale
Cited by: 28
Author(s): Cédric Le Guillou, Nicolas Chemidlin Prévost-Bouré, Battle Karimi, Nouraya Akkal-Corfini, Samuel Dequiedt, Virginie Nowak, Sébastien Terrat, Safya Menasseri‐Aubry, Valérie Viaud, Pierre‐Alain Maron, Lionel Ranjard
Software Mentions: 2
Published: over 6 years ago

10.3389/fmicb.2017.02203

Geochemical Influence on Microbial Communities at CO2-Leakage Analog Sites
Cited by: 15
Author(s): Baknoon Ham, Byoung Young Choi, Gi-Tak Chae, Matthew F. Kirk, Man Jae Kwon
Software Mentions: 2
Published: about 7 years ago

10.3389/fbioe.2020.00014

Ensilability of Biomass From Effloresced Flower Strips as Co-substrate in Bioenergy Production
Cited by: 9
Author(s): Jürgen Müller, Juliane Hahn
Software Mentions: 2
Published: almost 5 years ago

10.1186/1471-2180-12-25

Influence of wet distillers grains diets on beef cattle fecal bacterial community structure
Cited by: 47
Author(s): W. C. Rice, M. L. Galyean, Stephen B. Cox, Scot E. Dowd, N. A. Cole
Software Mentions: 2
Published: almost 13 years ago

10.1002/mbo3.436

Maintaining stability of the rumen ecosystem is associated with changes of microbial composition and epithelial TLR signaling
Cited by: 13
Author(s): Hong Shen, Zhan Chen, Zongzhuan Shen, Zhongyan Lu
Software Mentions: 2
Published: almost 8 years ago

10.1128/mSystems.00169-18

The Adenoids but Not the Palatine Tonsils Serve as a Reservoir for Bacteria Associated with Secretory Otitis Media in Small Children
Cited by: 19
Author(s): Helena Fagö-Olsen, Laura Marie Dines, Christian Hjort Sørensen, A. S. Jensen
Software Mentions: 2
Published: almost 6 years ago

10.3389/fmicb.2021.623853

Graphene-Based Nanomaterials Modulate Internal Biofilm Interactions and Microbial Diversity
Cited by: 4
Author(s): Lauris Evariste, Paul Braylé, Florence Mouchet, Jérôme Silvestre, Laury Gauthier, Emmanuel Flahaut, Éric Pinelli, Maialen Barret
Software Mentions: 2
Published: over 3 years ago

10.1007/s00203-021-02196-8

Impacts of replanting American ginseng on fungal assembly and abundance in response to disease outbreaks
Cited by: 19
Author(s): Ji Li, Lei Tian, Fahad Nasir, Jingjing Chang, Chunguang Chang, Jianfeng Zhang, Xiujun Li, Chunjie Tian
Software Mentions: 2
Published: almost 4 years ago

10.1186/s40851-018-0088-9

DNA metabarcoding of spiders, insects, and springtails for exploring potential linkage between above- and below-ground food webs
Cited by: 34
Author(s): Hirokazu Toju, Yasunori Baba
Software Mentions: 2
Published: almost 7 years ago

10.3389/fcimb.2019.00470

Structural and Functional Characterization of the Gut Microbiota in Elderly Women With Migraine
Cited by: 38
Author(s): Juanjuan Chen, Qi Wang, Anqi Wang, Zhanglin Lin
Software Mentions: 2
Published: almost 5 years ago

10.3389/fcimb.2016.00119

The Monoclonal Antitoxin Antibodies (Actoxumab–Bezlotoxumab) Treatment Facilitates Normalization of the Gut Microbiota of Mice with Clostridium difficile Infection
Cited by: 25
Author(s): Mária Džunková, Giuseppe D’Auria, Hua Xu, Jun Huang, Yinghua Duan, Andrés Moya, Ciarán P. Kelly, Xinhua Chen
Software Mentions: 2
Published: about 8 years ago

10.3390/nu13030919

Enterolignan Production in a Flaxseed Intervention Study in Postmenopausal US Women of African Ancestry and European Ancestry
Cited by: 10
Author(s): Susan E. McCann, Meredith A.J. Hullar, David Tritchler, Eduardo Cortes-Gomez, Song Yao, Warren Davis, Tracey O’Connor, Deborah O. Erwin, Lilian U. Thompson, Yan Li, Johanna W. Lampe
Software Mentions: 2
Published: over 3 years ago

10.3389/fcimb.2020.00403

How to Count Our Microbes? The Effect of Different Quantitative Microbiome Profiling Approaches
Cited by: 50
Author(s): Gianluca Galazzo, Niels van Best, Birke J. Benedikter, Kevin Janssen, Liene Bervoets, Christel Driessen, Melissa Oomen, Mayk Lucchesi, Pascalle H. van Eijck, Heike E. F. Becker, Mathias W. Hornef, Paul H. M. Savelkoul, Frank R. M. Stassen, Petra Wolffs, John Penders
Software Mentions: 2
Published: over 4 years ago

10.1186/s13073-016-0312-1

Roux-en-Y gastric bypass surgery of morbidly obese patients induces swift and persistent changes of the individual gut microbiota
Cited by: 238
Author(s): Albert Pallejà, Alireza Kashani, Kristine H. Allin, Trine Nielsen, Chenchen Zhang, Yin Li, Thorsten Brach, Suisha Liang, Feng Qian, Nils B. Jørgensen, Kirstine N. Bojsen‐Møller, Carsten Dirksen, Kristoffer Sølvsten Burgdorf, Jens J. Holst, Sten Madsbad, J. Wang, Oluf Pedersen, Torben Hansen, Manimozhiyan Arumugam
Software Mentions: 2
Published: over 8 years ago

10.7717/peerj.3594

The effect of captivity on the skin microbial symbionts in three Atelopus species from the lowlands of Colombia and Ecuador
Cited by: 14
Author(s): Sandra V. Flechas, Ailín Blasco-Zúñiga, Andrés Merino‐Viteri, Valeria Ramírez‐Castañeda, Miryan Rivera, Adolfo Amézquita
Software Mentions: 2
Published: over 7 years ago

10.3389/fcimb.2019.00297

Conjunctival Microbiome-Host Responses Are Associated With Impaired Epithelial Cell Health in Both Early and Late Stages of Trachoma
Cited by: 12
Author(s): Harry Pickering, Christine D. Palmer, Joanna Houghton, Pateh Makalo, Hassan Joof, Tamsyn Derrick, Adriana Gonçalves, David Mabey, Robin L. Bailey, Matthew J. Burton, Chrissy h. Roberts, Sarah E. Burr, Martin J. Holland
Software Mentions: 2
Published: over 5 years ago

10.1080/19490976.2020.1865706

Bacteroides uniformis combined with fiber amplifies metabolic and immune benefits in obese mice
Cited by: 65
Author(s): Inmaculada López-Almela, Marina Romaní-Pérez, Clara Bullich-Vilarrubias, Alfonso Benı́tez-Páez, Eva M. Gómez del Pulgar, Rubén Francés, Gerhard Liebisch, Yolanda Sanz
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12862-015-0433-y

Evolution, ecology and systematics of Soldanella (Primulaceae) in the southern Apennines (Italy)
Cited by: 9
Author(s): Alessandro Bellino, Leonardo Bellino, Daniela Baldantoni, Antonio Saracino
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0202270

The microbiota of hematophagous ectoparasites collected from migratory birds
Cited by: 18
Author(s): Francesco Cerutti, Paola Modesto, F. Rizzo, Alessandra Cravero, Irena Jurman, Stefano Costa, Mauro Giammarino, Maria Lucia Mandola, Maria Goria, Slobodanka Radović, Federica Cattonaro, Pier Luigi Acutis, Simone Peletto
Software Mentions: 2
Published: over 6 years ago

10.3389/fcimb.2021.665226

Metagenomic Next-Generation Sequencing of Bloodstream Microbial Cell-Free Nucleic Acid in Children With Suspected Sepsis in Pediatric Intensive Care Unit
Cited by: 19
Author(s): Gangfeng Yan, Jing Liu, Wei-Ming Chen, Chen Yang, Ye Cheng, Jinhao Tao, Xiaoyun Cai, Yang Zhou, Yixue Wang, Mingbang Wang, Guoping Li
Software Mentions: 2
Published: over 3 years ago

10.1186/s13071-019-3733-z

A comparative assessment of adult mosquito trapping methods to estimate spatial patterns of abundance and community composition in southern Africa
Cited by: 20
Author(s): Erin E. Gorsich, Brianna R. Beechler, Peter M. van Bodegom, Danny Govender, Milehna M. Guarido, Marietjie Venter, Maarten Schrama
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0154632

Triclosan Exposure Is Associated with Rapid Restructuring of the Microbiome in Adult Zebrafish
Cited by: 105
Author(s): Christopher A. Gaulke, Carrie L. Barton, Sarah Proffitt, Robert L. Tanguay, Thomas J. Sharpton
Software Mentions: 2
Published: over 8 years ago

10.1186/s13073-017-0421-5

Ethnic and diet-related differences in the healthy infant microbiome
Cited by: 90
Author(s): Jennifer C. Stearns, Michael A. Zulyniak, Russell J. de Souza, Natalie Campbell, Michelle E. Fontes, Mateen Shaikh, Malcolm R. Sears, Allan B. Becker, Piushkumar J. Mandhane, Padmaja Subbarao, Stuart E. Turvey, Milan Gupta, Joseph Beyene, Michael G. Surette, Sonia S. Anand
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2018.00213

Body Mass Index and Sex Affect Diverse Microbial Niches within the Gut
Cited by: 79
Author(s): Francesca Borgo, Stefania Garbossa, Alessandra Riva, Marco Severgnini, Carmelo Luigiano, Albero Benetti, Antonio E. Pontiroli, Giulia Morace, Elisa Borghi
Software Mentions: 2
Published: almost 7 years ago

10.7717/peerj.11075

Limited influence of marine sediment lyophilization on prokaryotic community structure assessed via amplicon sequencing: an example from environmentally contrasted sediment layers in Toulon harbor (France)
Cited by: 0
Author(s): Benjamin Misson, Cédric Garnier, Alexandre J. Poulain
Software Mentions: 2
Published: over 3 years ago

10.3389/fcimb.2020.596750

Comparative Analysis of the Gut Microbiota of Adult Mosquitoes From Eight Locations in Hainan, China
Cited by: 10
Author(s): Xun Kang, Yanhong Wang, Siping Li, Xiaomei Sun, Xiangyang Lu, Mamy Jayne Nelly Rajaofera, Yajun Lü, Le Kang, Aihua Zheng, Zhen Zou, Qianfeng Xia
Software Mentions: 2
Published: almost 4 years ago

10.3389/fmicb.2016.00689

Metagenomic Analysis of the Rumen Microbiome of Steers with Wheat-Induced Frothy Bloat
Cited by: 65
Author(s): Dipti Pitta, W. E. Pinchak, Nagaraju Indugu, Bonnie Vecchiarelli, Rohini Sinha, J. D. Fulford
Software Mentions: 2
Published: over 8 years ago

10.3389/fmicb.2019.00088

Shift in Bacterial Community Structure Drives Different Atrazine-Degrading Efficiencies
Cited by: 15
Author(s): Xiaowei Liu, Kai Chen, Shaochuang Chuang, Xihui Xu, Jiandong Jiang
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12894-020-0576-z

Studying the urine microbiome in superficial bladder cancer: samples obtained by midstream voiding versus cystoscopy
Cited by: 24
Author(s): Suchitra K. Hourigan, Wei Zhu, Wendy S. W. Wong, Nicole C. Clemency, Marina Provenzano, Thierry Vilboux, John E. Niederhuber, John F. Deeken, Simon Chung, Kim McDaniel-Wiley, Donald L. Trump
Software Mentions: 2
Published: almost 5 years ago

10.1093/aobpla/plv003

Effects of disturbance on vegetation by sand accretion and erosion across coastal dune habitats on a barrier island
Cited by: 27
Author(s): Thomas E. Miller
Software Mentions: 2
Published: almost 10 years ago

10.1371/journal.pone.0118566

Deep Sequencing and Ecological Characterization of Gut Microbial Communities of Diverse Bumble Bee Species
Cited by: 20
Author(s): Haw Chuan Lim, Chia‐Ching Chu, Manfredo J. Seufferheld, Sydney A. Cameron
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0178869

Low pH reduces the virulence of black band disease on Orbicella faveolata
Cited by: 12
Author(s): Erinn M. Muller, Nicole M. Leporacci, Keir J. Macartney, Alessandra G. Shea, Rachel E. Crane, Emily R. Hall, Kim B. Ritchie
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-021-86464-z

Esophageal microbiome in active eosinophilic esophagitis and changes induced by different therapies
Cited by: 21
Author(s): Emilio J Laserna-Mendieta, Jamie A. FitzGerald, Laura Arias-González, J M Ollala, David Bernardo, Marcus J. Claesson, Alfredo J. Lucendo
Software Mentions: 2
Published: over 3 years ago

10.1038/s41598-021-85488-9

eDNA metabarcoding for biodiversity assessment, generalist predators as sampling assistants
Cited by: 16
Author(s): Louise Solveig Nørgaard, Carsten Riis Olesen, Kristian Trøjelsgaard, Cino Pertoldi, Jeppe Lund Nielsen, Pierre Taberlet, Aritz Ruíz-González, Marta De Barba, Laura Iacolina
Software Mentions: 2
Published: over 3 years ago

10.3897/zookeys.707.14029

Herpetofaunal assemblages of a lowland broadleaf forest, an overgrown orchard forest and a lime orchard in Stann Creek, Belize
Cited by: 1
Author(s): Russell D. Gray, Colin Thomas Strine
Software Mentions: 2
Published: about 7 years ago

10.3389/fcimb.2021.701109

Gilbert’s Syndrome and the Gut Microbiota – Insights From the Case-Control BILIHEALTH Study
Cited by: 3
Author(s): Patrick A. Zöhrer, Claudia A. Hana, Nazlisadat Seyed Khoei, Christine Mölzer, Marlies Hörmann-Wallner, Anela Tosevska, Daniel Doberer, Rodrig Marculescu, Andrew Cameron Bulmer, Craig W. Herbold, David Berry, Karl‐Heinz Wagner
Software Mentions: 2
Published: about 3 years ago

10.3389/fcimb.2017.00488

Urinary Microbiome and Psychological Factors in Women with Overactive Bladder
Cited by: 62
Author(s): Peng Wu, Chen Yang, Jie Zhao, Guihao Zhang, Jiawei Chen, Junpeng Wang, Huijian Zhang
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0126373

Random versus Game Trail-Based Camera Trap Placement Strategy for Monitoring Terrestrial Mammal Communities
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Author(s): Jeremy J. Cusack, Amy Dickman, J. Marcus Rowcliffe, Chris Carbone, David W. Macdonald, Tim Coulson
Software Mentions: 2
Published: over 9 years ago

10.1186/s12866-021-02150-0

Culture-dependent and culture-independent characterization of bacterial community diversity in different types of sandy lands: the case of Minqin County, China
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Author(s): Yali Wei, Fang Wang, Jiyun Gao, Yongji Huang, Wei Ren, Hongmei Sheng
Software Mentions: 2
Published: over 3 years ago

10.1128/mSystems.00420-21

Viral Metagenome-Based Precision Surveillance of Pig Population at Large Scale Reveals Viromic Signatures of Sample Types and Influence of Farming Management on Pig Virome
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Author(s): Bingfang He, Wenjie Gong, Xiaomin Yan, Zihan Zhao, Ling’en Yang, Zhizhou Tan, Lin Xu, Aiwei Zhu, Jianing Zhang, Jihong Rao, Xiping Yu, Jianfeng Jiang, Zexi Lu, Zhang Yi-fang, Jianmin Wu, Yong Li, Yongyu Shi, Qing Jiang, Xiwen Chen, Changchun Tu
Software Mentions: 2
Published: over 3 years ago

10.1038/s41598-021-85538-2

Ant social foraging strategies along a Neotropical gradient of urbanization
Cited by: 10
Author(s): Wesley Dáttilo, Ian MacGregor-Fors
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0069559

Characterization of the Upper Respiratory Tract Microbiomes of Patients with Pandemic H1N1 Influenza
Cited by: 64
Author(s): Bonnie Chaban, Arianne Albert, Matthew G. Links, Jennifer L. Gardy, Patrick Tang, Janet E. Hill
Software Mentions: 2
Published: over 11 years ago

10.3390/nu11123011

Effect of Short-Term Dietary Intervention and Probiotic Mix Supplementation on the Gut Microbiota of Elderly Obese Women
Cited by: 46
Author(s): Raffaella Cancello, Silvia Turroni, Simone Rampelli, Stefania Cattaldo, Marco Candela, Laila Cattani, Stefania Mai, Roberta Vietti, Massimo Scacchi, Patrizia Brigidi, Cecilia Invitti
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0228165

Distinct temporal diversity profiles for nitrogen cycling genes in a hyporheic microbiome
Cited by: 11
Author(s): Karen E. Nelson, Emily B. Graham, Alex R. Crump, Sarah Fansler, Evan Arntzen, David W. Kennedy, James C. Stegen
Software Mentions: 2
Published: almost 5 years ago

10.3389/fmicb.2020.01938

Distinct Temporal Succession of Bacterial Communities in Early Marine Biofilms in a Portuguese Atlantic Port
Cited by: 26
Author(s): Jorge T. Antunes, António G G Sousa, Joana Azevedo, Adriana Rego, Pedro N. Leão, Vítor Vasconcelos
Software Mentions: 2
Published: over 4 years ago

10.3390/ani10061014

Human–Wildlife Conflicts in Krakow City, Southern Poland
Cited by: 12
Author(s): Sayantani M. Basak, Izabela A. Wierzbowska, Agnieszka Gajda, Marcin Czarnołęski, Maciej Lesiak, Elżbieta Widera
Software Mentions: 2
Published: over 4 years ago

10.3389/fcimb.2021.559148

Alterations of Gastric Microbiota in Gastric Cancer and Precancerous Stages
Cited by: 39
Author(s): Xinmei Zhang, Chao Li, Weijun Cao, Zhenyu Zhang
Software Mentions: 2
Published: over 3 years ago

10.3389/fcimb.2020.00124

Saliva Microbiome Changes in Patients With Periodontitis With and Without Chronic Obstructive Pulmonary Disease
Cited by: 14
Author(s): Lin Ma, Xuefen Li, Jitian Wang, Cheng Cheng, Tianyi Zhang, Xiaozhe Han, Yiqing Song, Zuomin Wang, Songlin Wang
Software Mentions: 2
Published: over 4 years ago

10.1007/s00203-019-01661-9

Diversity and distribution of thermophilic hydrogenogenic carboxydotrophs revealed by microbial community analysis in sediments from multiple hydrothermal environments in Japan
Cited by: 15
Author(s): Kimiho Omae, Yuto Fukuyama, Hisato Yasuda, Kenta Mise, Takashi Yoshida, Yoshihiko Sako
Software Mentions: 2
Published: over 5 years ago

10.3389/fcimb.2021.732613

Effects of Helicobacter pylori Infection on the Oral Microbiota of Reflux Esophagitis Patients
Cited by: 6
Author(s): Tian Liang, Fang Liu, Lijun Liu, Zhiying Zhang, Wenxue Dong, Su Bai, Lifeng Ma, Longli Kang
Software Mentions: 2
Published: about 3 years ago

10.1038/s41598-021-84177-x

Effects of different proportions of soft rock additions on organic carbon pool and bacterial community structure of sandy soil
Cited by: 2
Author(s): Wanying Li, Zhen Guo, Juan Li, Jichang Han
Software Mentions: 2
Published: almost 4 years ago

10.1038/srep45220

A distinct bacterial dysbiosis associated skin inflammation in ovine footrot
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Author(s): Grazieli Maboni, Adam Blanchard, Sara Frosth, Ceri E. Stewart, Richard D. Emes, Sabine Tötemeyer
Software Mentions: 2
Published: over 7 years ago

10.3389/fcimb.2017.00424

Distinctive Gut Microbiota Is Associated with Diarrheagenic Escherichia coli Infections in Chilean Children
Cited by: 24
Author(s): Pablo Gallardo, Mariana Izquierdo, Roberto Vidal, Nayaret Chamorro-Veloso, Ramon Rosselló‐Móra, Miguel O’Ryan, Mauricio J. Farfán
Software Mentions: 2
Published: about 7 years ago

10.1093/aobpla/plaa061

Bryophyte cover and richness decline after 18 years of experimental warming in alpine Sweden
Cited by: 19
Author(s): Juha M. Alatalo, Annika K. Jägerbrand, Mohammad Bagher Erfanian, Shengbin Chen, Shouqin Sun, Ulf Molau
Software Mentions: 2
Published: about 4 years ago

10.3389/fcimb.2021.720674

The Skin Microbiome of Patients With Atopic Dermatitis Normalizes Gradually During Treatment
Cited by: 29
Author(s): Veda D Khadka, Felix M. Key, Carolina Romo-González, Adrián Martínez-Gayosso, Blanca Lucina Campos-Cabrera, Armando Gerónimo-Gallegos, Tucker C Lynn, Carola Durán‐McKinster, Rafael Coria-Jiménez, Tami D. Lieberman, Maria Teresa García‐Romero
Software Mentions: 2
Published: about 3 years ago

10.1038/s41598-020-79778-x

Performance comparison of two reduced-representation based genome-wide marker-discovery strategies in a multi-taxon phylogeographic framework
Cited by: 5
Author(s): Philipp Kirschner, Wolfgang Arthofer, Stefanie Pfeifenberger, Eliška Záveská, Peter Schönswetter, Alexander Gamisch, Andreas Hilpold, Ovidiu Paun, Isabel Sanmartín, Emiliano Trucchi
Software Mentions: 2
Published: almost 4 years ago

10.3390/ani10040701

Significant Differences in the Gut Bacterial Communities of Hooded Crane (Grus monacha) in Different Seasons at a Stopover Site on the Flyway
Cited by: 18
Author(s): Fengling Zhang, Xingjia Xiang, Yushu Dong, Shaomin Yan, Yunwei Song, Lizhi Zhou
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0169916

Diversity and composition of vaginal microbiota of pregnant women at risk for transmitting Group B Streptococcus treated with intrapartum penicillin
Cited by: 18
Author(s): Luiz Fernando Würdig Roesch, Rita de Cássia dos Santos Silveira, Andrea Corso, Priscila Caroline Thiago Dobbler, Volker Mai, Bruna Schafer Rojas, Álvaro Macedo Laureano, Renato S. Procianoy
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0208986

Determining diet from faeces: Selection of metabarcoding primers for the insectivore Pyrenean desman (Galemys pyrenaicus)
Cited by: 19
Author(s): Amaiur Esnaola, Aitor Arrizabalaga‐Escudero, Jorge González‐Esteban, Arturo Elosegi, Joxerra Aihartza
Software Mentions: 2
Published: almost 6 years ago

10.3389/fcimb.2020.535310

Fecal and Serum Metabolomic Signatures and Microbial Community Profiling of Postmenopausal Osteoporosis Mice Model
Cited by: 28
Author(s): Kaicheng Wen, Tao Lin, Zhengbo Tao, Yan Meng, Siming Zhou, Jianhua Chen, Keda Yang, Wacili Da, Yue Zhu
Software Mentions: 2
Published: about 4 years ago

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