10.3390/insects12050426

The Diversity and Dynamics of Fungi in Dryocosmus kuriphilus Community
Cited by: 2
Author(s): Xiaohui Yang, Xiangmei Li, Dao‐Hong Zhu, Yang Zeng, Lvquan Zhao
Software Mentions: 2
Published: over 5 years ago

10.1093/molbev/msab119

Molecular Parallelism Underlies Convergent Highland Adaptation of Maize Landraces
Cited by: 26
Author(s): Li Wang, Emily B. Josephs, Kristin M. Lee, Lucas M. Roberts, Rubén Rellán‐Álvarez, Jeffrey Ross‐Ibarra, Matthew B. Hufford
Software Mentions: 2
Published: over 5 years ago

10.1002/ece3.2803

Elevational gradient and human effects on butterfly species richness in the French Alps
Cited by: 19
Author(s): Arnaud Gallou, Yann Baillet, Gentile Francesco Ficetola, Laurence Després
Software Mentions: 2
Published: over 9 years ago

10.3390/insects12090775

Ephemeroptera (Mayflies) Assemblages and Environmental Variation along Three Streams Located in the Dry-Hot Valleys of Baima Snow Mountain, Yunnan, Southwest China
Cited by: 3
Author(s): Muhammad Farooq, Xianfu Li, Lu Tan, Davide Fornacca, Yanpeng Li, Nima Cili, Zhengkun Tian, Lu Yang, Xiaoling Deng, Shuoran Liu, Wen Xiao
Software Mentions: 2
Published: about 5 years ago

10.1128/mSystems.00119-20

Continental-Scale Microbiome Study Reveals Different Environmental Characteristics Determining Microbial Richness, Composition, and Quantity in Hotel Rooms
Cited by: 16
Author(s): Fu Xi, Yanling Li, Qianqian Yuan, Gui-Hong Cai, Yiqun Deng, Xin Zhang, Dan Norbäck, Yu Sun
Software Mentions: 2
Published: over 6 years ago

10.1093/icb/icx090

The Effects of Captivity on the Mammalian Gut Microbiome
Cited by: 269
Author(s): Valerie J. McKenzie, Se Jin Song, Frédéric Delsuc, Tiffany Prest, Angela M. Oliverio, Timothy Korpita, Alexandra Alexiev, Katherine R. Amato, Jessica L. Metcalf, Martín M. Kowalewski, Nico L. Avenant, Andrés Link, Anthony Di Fiore, Andaine Seguin-Orlando, Claudia Feh, Ludovic Orlando, Joseph R. Mendelson, Jon G. Sanders, Rob Knight
Software Mentions: 2
Published: about 9 years ago

10.1093/iob/obz023

Have Niche, Will Travel. New Means of Linking Diet and Ecomorphology Reveals Niche Conservatism in Freshwater Cottoid Fishes
Cited by: 9
Author(s): Thaddaeus John Buser, Darby Finnegan, Adam P. Summers, Matthew A. Kolmann
Software Mentions: 2
Published: almost 8 years ago

10.1186/1759-8753-5-1

Impact of ploidy level on the distribution of Pokey element insertions in the Daphnia pulex complex
Cited by: 1
Author(s): Roland Vergilino, Shannon H. C. Eagle, Teresa J. Crease
Software Mentions: 2
Published: almost 13 years ago

10.1371/journal.pone.0198341

How many landmarks are enough to characterize shape and size variation?
Cited by: 52
Author(s): Akinobu Watanabe
Software Mentions: 2
Published: over 8 years ago

10.1002/ece3.6984

Changes in vegetation structure and composition of a lowland mire over a sixty‐five‐year interval
Cited by: 1
Author(s): Alexander Lovegrove, Adrian C. Newton, Paul M. Evans, Anita Díaz, Arthur C Newton, Lynn Davy, P. J. Newbould
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0232398

Factors affecting the microbiome of Ixodes scapularis and Amblyomma americanum
Cited by: 49
Author(s): R. Jory Brinkerhoff, Chris D. Clark, Kelly M. Ocasio, David T. Gauthier, Wayne L. Hynes
Software Mentions: 2
Published: over 6 years ago

10.1002/ece3.2269

Evaluating the influence of life‐history characteristics on genetic structure: a comparison of small mammals inhabiting complex agricultural landscapes
Cited by: 21
Author(s): Elizabeth M. Kierepka, Sara Anderson, Robert K. Swihart, Olin E. Rhodes
Software Mentions: 2
Published: about 10 years ago

10.1111/1365-2656.12728

Ants are the major agents of resource removal from tropical rainforests
Cited by: 80
Author(s): Huw I. Griffiths, Louise A. Ashton, Alice E. Walker, Fevziye Hasan, Theodore A. Evans, Paul Eggleton, Catherine L. Parr
Software Mentions: 2
Published: about 9 years ago

10.1111/1365-2656.12725

Strategies for managing rival bacterial communities: Lessons from burying beetles
Cited by: 50
Author(s): Ana Duarte, Martin Welch, Chris Swannack, Josef Wagner, Rebecca M. Kilner
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0145808

Effects of Management on Lichen Species Richness, Ecological Traits and Community Structure in the Rodnei Mountains National Park (Romania)
Cited by: 24
Author(s): Ioana Violeta Ardelean, Christine Keller, Christoph Scheidegger
Software Mentions: 2
Published: almost 11 years ago

10.1186/s40104-019-0386-x

Dietary fibre enrichment of supplemental feed modulates the development of the intestinal tract in suckling piglets
Cited by: 21
Author(s): H.M.J. van Hees, Mark Davids, Dominiek Maes, Sam Millet, Sam Possemiers, L.A. den Hartog, Theo A. T. G. van Kempen, Geert Janssens
Software Mentions: 2
Published: about 7 years ago

10.3390/microorganisms9081767

Different Responses of Microbiota across Intestinal Tract to Enterococcus faecium HDRsEf1 and Their Correlation with Inflammation in Weaned Piglets
Cited by: 7
Author(s): Junlan Zhou, Ji Luo, Sen Yang, Qiling Xiao, Xiliang Wang, Zutao Zhou, Yufei Xiao, Deshi Shi
Software Mentions: 2
Published: about 5 years ago

10.1186/s40104-020-0427-5

Dynamic alterations in early intestinal development, microbiota and metabolome induced by in ovo feeding of L-arginine in a layer chick model
Cited by: 24
Author(s): Dong Dai, Shu‐geng Wu, Haijun Zhang, Guang‐hai Qi, Jing Wang
Software Mentions: 2
Published: over 6 years ago

10.1186/s40104-020-00531-5

Effects of brewers’ spent grain protein hydrolysates on gas production, ruminal fermentation characteristics, microbial protein synthesis and microbial community in an artificial rumen fed a high grain diet
Cited by: 23
Author(s): Ran Tao, Long Jin, Ranithri Abeynayake, A.M. Saleem, Xiumin Zhang, Dongyan Niu, Lingyun Chen, Wenzhu Yang
Software Mentions: 2
Published: almost 6 years ago

10.1002/ece3.6970

Fine‐scale variation within urban landscapes affects marking patterns and gastrointestinal parasite diversity in red foxes
Cited by: 6
Author(s): Lisa V. Gecchele, Amy B. Pedersen, Matthew B.V. Bell
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41396-018-0313-8

Linking bacterial community composition to soil salinity along environmental gradients
Cited by: 236
Author(s): Kristin Rath, Noah Fierer, Daniel V. Murphy, Johannes Rousk
Software Mentions: 2
Published: almost 8 years ago

10.1186/s40104-021-00589-9

Resveratrol and its derivative pterostilbene ameliorate intestine injury in intrauterine growth-retarded weanling piglets by modulating redox status and gut microbiota
Cited by: 18
Author(s): Yanan Chen, Hao Zhang, Yueping Chen, Peilu Jia, Shuli Ji, Yuying Zhang
Software Mentions: 2
Published: over 5 years ago

10.3390/microorganisms8030347

Aflatoxins: Occurrence, Exposure, and Binding to Lactobacillus Species from the Gut Microbiota of Rural Ugandan Children
Cited by: 12
Author(s): Alex Paul Wacoo, Prudence Atukunda, Grace Kyamazima Mehangye Muhoozi, Martin Braster, Marijke J. Wagner, Tim van den Broek, Wilbert Sybesma, Ane C. Westerberg, Per Ole Iversen, Remco Kort
Software Mentions: 2
Published: over 6 years ago

10.1002/ece3.1075

Consistent size‐independent harvest selection on fish body shape in two recreationally exploited marine species
Cited by: 30
Author(s): Josep Alós, Miquel Palmer, Marta Linde‐Medina, Robert Arlinghaus
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0153420

Ant Diversity and Distribution along Elevation Gradients in the Australian Wet Tropics: The Importance of Seasonal Moisture Stability
Cited by: 40
Author(s): Somayeh Nowrouzi, Alan N. Andersen, Sarina Macfadyen, Kyran M. Staunton, Jeremy VanDerWal, Simon K. A. Robson
Software Mentions: 2
Published: over 10 years ago

10.1111/1365-2664.12860

Sweat bees on hot chillies: provision of pollination services by native bees in traditional slash‐and‐burn agriculture in the Yucatán Peninsula of tropical Mexico
Cited by: 36
Author(s): Patricia Landaverde-González, José Javier G. Quezada–Eúan, Panagiotis Theodorou, Tomás E. Murray, Martin Husemann, Ricardo Ayala, Humberto Moo-Valle, Rémy Vandame, Robert J. Paxton
Software Mentions: 2
Published: over 9 years ago

10.1128/JB.00478-18

Cystic Fibrosis-Associated Stenotrophomonas maltophilia Strain-Specific Adaptations and Responses to pH
Cited by: 9
Author(s): Tara Gallagher, Joann Phan, Andrew Oliver, Alexander B. Chase, Whitney England, Stephen Wandro, Clark Hendrickson, Stefan Riedel, Katrine Whiteson
Software Mentions: 2
Published: over 7 years ago

10.1128/JB.00117-21

Pathways of Iron and Sulfur Acquisition, Cofactor Assembly, Destination, and Storage in Diverse Archaeal Methanogens and Alkanotrophs
Cited by: 12
Author(s): Christina Johnson, Alexis England, Mason Munro‐Ehrlich, Daniel R. Colman, Jennifer L. DuBois, Eric S. Boyd
Software Mentions: 2
Published: about 5 years ago

10.1038/s42003-021-01742-w

1 °C warming increases spatial competition frequency and complexity in Antarctic marine macrofauna
Cited by: 5
Author(s): David K. A. Barnes, Gail Ashton, Simon A. Morley, Lloyd S. Peck
Software Mentions: 2
Published: over 5 years ago

10.1111/jbi.13220

Range‐constrained co‐occurrence simulation reveals little niche partitioning among rock‐dwelling <i>Montenegrina</i> land snails (Gastropoda: Clausiliidae)
Cited by: 12
Author(s): Zoltán Fehér, Katharina Mason, Miklós Szekeres, Elisabeth Haring, Sonja Bamberger, Barna Páll‐Gergely, Péter Sólymos
Software Mentions: 2
Published: over 8 years ago

10.1128/mSystems.01017-20

Fungal Communities Are Important Determinants of Bacterial Community Composition in Deadwood
Cited by: 23
Author(s): Iñaki Odriozola, Nerea Abrego, Vojtěch Tláskal, Petra Zrůstová, Daniel Morais, Tomáš Větrovský, Otso Ovaskainen, Petr Baldrián
Software Mentions: 2
Published: over 5 years ago

10.1038/s41396-020-0632-4

Novel phosphate-solubilizing bacteria enhance soil phosphorus cycling following ecological restoration of land degraded by mining
Cited by: 153
Author(s): Jie-Liang Liang, Jun Liu, Pu Jia, Tong Yang, Qingwei Zeng, Sheng-Chang Zhang, Bin Liao, Wen‐Sheng Shu, Jintian Li
Software Mentions: 2
Published: over 6 years ago

10.1007/s10886-020-01184-4

Relationships Between Chemical Defenses of Common Toad (Bufo bufo) Tadpoles and Bacterial Community Structure of their Natural Aquatic Habitat
Cited by: 3
Author(s): János Ujszegi, Balázs Vajna, Ágnes M. Móricz, Dániel Krüzselyi, Kristóf Korponai, Gergely Krett, Attila Hettyey
Software Mentions: 2
Published: over 6 years ago

10.1007/s10886-020-01156-8

Soil Inoculation Alters Leaf Metabolic Profiles in Genetically Identical Plants
Cited by: 4
Author(s): Martine Huberty, Beverly Martis, Jorian van Kampen, Young Hae Choi, Klaas Vrieling, Peter G. L. Klinkhamer, T. Martijn Bezemer
Software Mentions: 2
Published: over 6 years ago

10.1007/s10886-020-01221-2

Composition of Strawberry Floral Volatiles and their Effects on Behavior of Strawberry Blossom Weevil, Anthonomus rubi
Cited by: 11
Author(s): Raimondas Mozūraitis, David R. Hall, Nina Trandem, Baiba Ralle, Kalle Tunström, Lene Sigsgaard, Catherine Baroffio, Michelle Fountain, J. V. Cross, Atle Wibe, Anna‐Karin Borg‐Karlson
Software Mentions: 2
Published: about 6 years ago

10.1007/s10886-020-01227-w

The Importance of Methyl-Branched Cuticular Hydrocarbons for Successful Host Recognition by the Larval Ectoparasitoid Holepyris sylvanidis
Cited by: 11
Author(s): Sarah Awater-Salendo, Hartwig Schulz, Monika Hilker, Benjamin Fürstenau
Software Mentions: 2
Published: almost 6 years ago

10.1007/s10886-021-01267-w

Chemical Variation among Castes, Female Life Stages and Populations of the Facultative Eusocial Sweat Bee Halictus rubicundus (Hymenoptera: Halictidae)
Cited by: 1
Author(s): Iris Steitz, Robert J. Paxton, Stefan Schulz, Manfred Ayasse
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0168235

Assessing Caribbean Shallow and Mesophotic Reef Fish Communities Using Baited-Remote Underwater Video (BRUV) and Diver-Operated Video (DOV) Survey Techniques
Cited by: 44
Author(s): Dominic A. Andradi‐Brown, Consuelo Macaya-Solis, Dan A. Exton, Erika Gress, Georgina Wright, Alex D. Rogers
Software Mentions: 2
Published: almost 10 years ago

10.1038/s42003-020-01627-4

Genome-wide study of a Neolithic Wartberg grave community reveals distinct HLA variation and hunter-gatherer ancestry
Cited by: 14
Author(s): Alexander Immel, Federica Pierini, Christoph Rinne, John Meadows, Rodrigo Barquera, András Szolek, Julian Susat, Lisa Böhme, Janina Dose, Joanna H. Bonczarowska, Clara Drummer, Katharina Fuchs, David Ellinghaus, Jan Christian Kässens, Martin Furholt, Oliver Kohlbacher, Sabine Schade-Lindig, André Franke, Stefan Schreiber, Johannes Krause, Johannes Müller, Tobias Lenz, Almut Nebel, Ben Krause‐Kyora
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0181720

Main predictors of periphyton species richness depend on adherence strategy and cell size
Cited by: 24
Author(s): Vanessa Majewski Algarte, Tadeu Siqueira, Victor Lemes Landeiro, Liliana Rodrigues, Cláudia Cósta Bonecker, Luzia Cleide Rodrigues, Natália Fernanda Santana, Rosemara Fugi, Luis Maurício Bini
Software Mentions: 2
Published: about 9 years ago

10.1038/s42003-018-0260-y

Nematodes in a polar desert reveal the relative role of biotic interactions in the coexistence of soil animals
Cited by: 33
Author(s): Tancredi Caruso, Ian D. Hogg, Uffe N. Nielsen, Eric Bottos, Charles K. Lee, D. W. Hopkins, S. Craig Cary, John E. Barrett, T.G. Allan Green, B. C. Storey, Diana H. Wall, Byron J. Adams
Software Mentions: 2
Published: over 7 years ago

10.3390/microorganisms9091793

The Intestinal Bacterial Community and Functional Potential of Litopenaeus vannamei in the Coastal Areas of China
Cited by: 7
Author(s): Yimeng Cheng, Chaorong Ge, Wei Li, Huaiying Yao
Software Mentions: 2
Published: about 5 years ago

10.1038/s42003-020-01587-9

A unified framework for herbivore-to-producer biomass ratio reveals the relative influence of four ecological factors
Cited by: 3
Author(s): Takehiro Kazama, Jotaro Urabe, Masato Yamamichi, Kotaro Tokita, Xia Yin, Izumi Katano, Hideyuki Doi, Takehito Yoshida, Nelson G. Hairston
Software Mentions: 2
Published: almost 6 years ago

10.1038/s42003-019-0481-8

Synergies between mycorrhizal fungi and soil microbial communities increase plant nitrogen acquisition
Cited by: 85
Author(s): Rachel Hestrin, Edith C. Hammer, Carsten W. Mueller, Johannes Lehmann
Software Mentions: 2
Published: over 7 years ago

10.3390/microorganisms9010118

Higher Sensitivity of Soil Microbial Network Than Community Structure under Acid Rain
Cited by: 12
Author(s): Ziqiang Liu, Hui Wei, Jiaen Zhang, Muhammad Saleem, Yuxia He, Jiawen Zhong, Rui Ma
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-018-27168-9

Environmental legacy contributes to the resilience of methane consumption in a laboratory microcosm system
Cited by: 10
Author(s): Sascha Krause, Marion Meima-Franke, Annelies J. Veraart, Guohao Ren, Adrian Ho, Paul L. E. Bodelier
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-018-27017-9

Using co-occurrence information and trait composition to understand individual plant performance in grassland communities
Cited by: 13
Author(s): Edward B. Breitschwerdt, Ute Jandt, Helge Bruelheide
Software Mentions: 2
Published: over 8 years ago

10.1038/s42003-020-01547-3

Ecological plasticity governs ecosystem services in multilayer networks
Cited by: 12
Author(s): Clare Gray, Athen Ma, Órla B. McLaughlin, Sandrine Petit, Guy Woodward, David Bohan
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0143566

Diversity and Interactions of Wood-Inhabiting Fungi and Beetles after Deadwood Enrichment
Cited by: 16
Author(s): Andreas Floren, Dirk Krüger, Tobias Müller, Marcus Dittrich, Renate Rudloff, Björn Hoppe, K. Eduard Linsenmair
Software Mentions: 2
Published: almost 11 years ago

10.1038/s41598-018-28091-9

Differential preservation of endogenous human and microbial DNA in dental calculus and dentin
Cited by: 86
Author(s): Allison E. Mann, Susanna Sabin, Kirsten A. Ziesemer, Åshild J. Vågene‬, Hannes Schroeder, Andrew T. Ozga, Krithivasan Sankaranarayanan, Courtney A. Hofman, James A. Fellows Yates, Domingo C. Salazar‐García, Bruno Fröhlich, Mark Aldenderfer, Menno L. P. Hoogland, Christopher Read, George R. Milner, Anne C. Stone, Cecil M. Lewis, Johannes Krause, Corinne L. Hofman, Kirsten I. Bos, Christina Warinner
Software Mentions: 2
Published: over 8 years ago

10.3390/cells10040823

A New Strain of Christensenella minuta as a Potential Biotherapy for Obesity and Associated Metabolic Diseases
Cited by: 31
Author(s): Wilfrid Mazier, Katy Le Corf, Ccori Martinez, Héloïse Tudela, Déborah Kissi, Camille Kropp, Chrislain Coubard, Marion Soto, Frédéric Elustondo, Georges Rawadi, Sandrine P. Claus
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-018-28150-1

Litter quality drives the differentiation of microbial communities in the litter horizon across an alpine treeline ecotone in the eastern Tibetan Plateau
Cited by: 19
Author(s): Haifeng Zheng, Yamei Chen, Yang Liu, Jian Zhang, Weiru Yang, Yang Lin, Hongjie Li, Lifeng Wang, Fuzhong Wu, Li Guo
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0066109

Plant and Bird Presence Strongly Influences the Microbial Communities in Soils of Admiralty Bay, Maritime Antarctica
Cited by: 26
Author(s): Lia Cardoso Rocha Saraiva Teixeira, Etienne Yeargeau, Fabiano de Carvalho Balieiro, Marisa de Cássia Píccolo, Raquel S. Peixoto, Charles W. Greer, Alexandre Soares Rosado
Software Mentions: 2
Published: over 13 years ago

10.3390/microorganisms9010120

Comparative Analysis of the Ecological Succession of Microbial Communities on Two Artificial Reef Materials
Cited by: 16
Author(s): Zhansheng Guo, Lu Wang, Cong Wang, Zhaoyang Jiang, Zhenlin Liang
Software Mentions: 2
Published: almost 6 years ago

10.1016/j.chom.2019.05.001

Dynamic Modulation of the Gut Microbiota and Metabolome by Bacteriophages in a Mouse Model
Cited by: 286
Author(s): Bryan B. Hsu, Travis E. Gibson, Vladimir Yeliseyev, Qing Liu, Lorena Lyon, Lynn Bry, Pamela A. Silver, Georg K. Gerber
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0095726

The Lung Microbiome of Ugandan HIV-Infected Pneumonia Patients Is Compositionally and Functionally Distinct from That of San Franciscan Patients
Cited by: 49
Author(s): Shoko Iwai, Danhong Huang, Serena Fong, Leah G. Jarlsberg, William Worodria, Samuel Yoo, Adithya Cattamanchi, J. Lucian Davis, Sylvia Kaswabuli, Mark R. Segal, Laurence Huang, Susan V. Lynch
Software Mentions: 2
Published: over 12 years ago

10.1038/s41598-018-29039-9

Contrasting biogeography and diversity patterns between diatoms and haptophytes in the central Pacific Ocean
Cited by: 45
Author(s): Hisashi Endo, Hiroyuki Ogata, Koji Suzuki
Software Mentions: 2
Published: about 8 years ago

10.3390/microorganisms9081778

From Water into Sediment—Tracing Freshwater Cyanobacteria via DNA Analyses
Cited by: 13
Author(s): Ebuka Canisius Nwosu, Patricia Roeser, Shuai Yang, Lars Ganzert, Olaf Dellwig, Sylvia Pinkerneil, Achim Brauer, Elke Dittmann, Dirk Wagner, Susanne Liebner
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-018-29346-1

Vineyard under-vine floor management alters soil microbial composition, while the fruit microbiome shows no corresponding shifts
Cited by: 50
Author(s): Ming-Yi Chou, Justine E. Vanden Heuvel, Terrence H. Bell, Kevin Panke-Buisse, Jenny Kao‐Kniffin
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-018-29521-4

Comparative mangrove metagenome reveals global prevalence of heavy metals and antibiotic resistome across different ecosystems
Cited by: 65
Author(s): Madangchanok Imchen, Ranjith Kumavath, Debmalya Barh, Aline B. M. Vaz, Aristóteles Goés-Neto, Sandeep Tiwari, Preetam Ghosh, Alice R. Wattam, Vasco Azevedo
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-018-29251-7

Ocean acidification drives community shifts towards simplified non-calcified habitats in a subtropical−temperate transition zone
Cited by: 79
Author(s): Sylvain Agostini, Ben P. Harvey, Shigeki Wada, Koetsu Kon, Marco Milazzo, Kazuo Inaba, Jason M. Hall-Spencer
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-018-29953-y

Microbiomes of gall-inducing copepod crustaceans from the corals Stylophora pistillata (Scleractinia) and Gorgonia ventalina (Alcyonacea)
Cited by: 10
Author(s): Pavel V. Shelyakin, Sofya K. Garushyants, М. А. Никитин, Sofya V. Mudrova, Michael L. Berumen, A.G.C.L. Speksnijder, Bert W. Hoeksema, Diego Fontaneto, Mikhail S. Gelfand, Viatcheslav N. Ivanenko
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0142097

Lung Microbiota Changes Associated with Chronic Pseudomonas aeruginosa Lung Infection and the Impact of Intravenous Colistimethate Sodium
Cited by: 10
Author(s): David Collie, Laura Glendinning, John R. W. Govan, Steven H. Wright, Elisabeth M. Thornton, Peter Tennant, C. Doherty, Gerry McLachlan
Software Mentions: 2
Published: almost 11 years ago

10.1128/mSystems.00869-19

FORENSIC: an Online Platform for Fecal Source Identification
Cited by: 12
Author(s): Adélaïde Roguet, Özcan C. Esen, A. Murat Eren, Ryan J. Newton, Sandra L. McLellan
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0075962

Using Next-Generation Sequencing to Analyse the Diet of a Highly Endangered Land Snail (Powelliphanta augusta) Feeding on Endemic Earthworms
Cited by: 46
Author(s): Stéphane Boyer, Stephen D. Wratten, Andrew Holyoake, Jawad Abdelkrim, Robert Cruickshank
Software Mentions: 2
Published: about 13 years ago

10.3390/cancers13163987

Ultrafine Jujube Powder Enhances the Infiltration of Immune Cells during Anti-PD-L1 Treatment against Murine Colon Adenocarcinoma
Cited by: 10
Author(s): Nan Jing, Luoyang Wang, Huiren Zhuang, Guoqiang Jiang, Zheng Liu
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-018-30901-z

Comparison of microbiomes of cold-water corals Primnoa pacifica and Primnoa resedaeformis, with possible link between microbiome composition and host genotype
Cited by: 16
Author(s): Dawn B. Goldsmith, Christina A. Kellogg, Cheryl L. Morrison, Michael A. Gray, Robert P. Stone, Rhian G. Waller, Sandra Brooke, Steve W. Ross
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-018-30428-3

Gut microbiota composition and butyrate production in children affected by non-IgE-mediated cow’s milk allergy
Cited by: 71
Author(s): Roberto Berni Canani, Francesca De Filippis, Rita Nocerino, Lorella Paparo, Carmen Di Scala, Linda Cosenza, Giusy Della Gatta, Antonio Calignano, Carmen De, Manolo Laiola, Jack A. Gilbert
Software Mentions: 2
Published: about 8 years ago

10.3390/cancers12092619

Alterations in Gastric Microbial Communities Are Associated with Risk of Gastric Cancer in a Korean Population: A Case-Control Study
Cited by: 10
Author(s): Madhawa Gunathilake, Jeonghee Lee, Il Ju Choi, Young Il Kim, Jaekyung Yoon, Woo Jun Sul, Jihyun F. Kim, Jeongseon Kim
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-018-30689-y

A detailed investigation of the porcine skin and nose microbiome using universal and Staphylococcus specific primers
Cited by: 36
Author(s): Mikael Lenz Strube, Julie Elvekjær Hansen, Sophia Rasmussen, Karl Pedersen
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0102130

Characterization of the Bacterial Communities of Life Stages of Free Living Lone Star Ticks (Amblyomma americanum)
Cited by: 77
Author(s): Amanda Jo Williams-Newkirk, Lori A. Rowe, Tonya Mixson‐Hayden, Gregory A. Dasch
Software Mentions: 2
Published: about 12 years ago

10.1038/s41598-018-31382-w

The phylogenetic relationships and species richness of host-specific Dactylogyrus parasites shaped by the biogeography of Balkan cyprinids
Cited by: 25
Author(s): Michal Benovics, Yves Desdevises, Jasna Vukić, Radek Šanda, Andrea Vetešníková Šimková
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-018-31706-w

Bacterial communities and potential waterborne pathogens within the typical urban surface waters
Cited by: 47
Author(s): Decai Jin, Xiao Kong, Bingjian Cui, Shulan Jin, Yonghong Xie, Xingrun Wang, Ye Deng
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-018-31731-9

Habitat environments impacted the gut microbiome of long-distance migratory swan geese but central species conserved
Cited by: 51
Author(s): Yueni Wu, Yefeng Yang, Lei Cao, Huaqun Yin, Meiying Xu, Zhujun Wang, Yangying Liu, Xin Wang, Ye Deng
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0126981

Biogeography and Genetic Structure in Populations of a Widespread Lichen (Parmelina tiliacea, Parmeliaceae, Ascomycota)
Cited by: 11
Author(s): Jano Núñez‐Zapata, Paloma Cubas, David L. Hawksworth, Ana Crespo
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pone.0179443

DNA extraction replicates improve diversity and compositional dissimilarity in metabarcoding of eukaryotes in marine sediments
Cited by: 61
Author(s): Anders Lanzén, Katrine Lekang, Inge Jonassen, Eric M. Thompson, Christofer Troedsson
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0195874

Diversity of cultivable fungal endophytes in Paullinia cupana (Mart.) Ducke and bioactivity of their secondary metabolites
Cited by: 28
Author(s): Fábio de Azevedo Silva, Rhavena Graziela Liotti, Ana Paula de Araújo Boleti, Érica de Melo Reis, Marilene Borges Silva Passos, Edson Lucas dos Santos, Olívia Moreira Sampaio, Ana Helena Januário, Carmen Lucia Bassi Branco, Gilvan Ferreira da Silva, Elisabeth Aparecida Furtado de Mendonça, Marcos Antônio Soares
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-018-31738-2

The gastric mucosal-associated microbiome in patients with gastric polyposis
Cited by: 13
Author(s): Rongrong Ren, Zikai Wang, Huaibo Sun, Xuefeng Gao, Gang Sun, Lihua Peng, Bin Yan, Yunsheng Yang
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0207940

Seasonal changes in diet and chemical defense in the Climbing Mantella frog (Mantella laevigata)
Cited by: 16
Author(s): Nora A. Moskowitz, Alexandre B. Roland, Eva K. Fischer, Ndimbintsoa Ranaivorazo, Charles Vidoudez, Marianne T. Aguilar, Sophia Caldera, Jacqueline Chea, Miruna G. Cristus, Jett Crowdis, Bluyé DeMessie, Caroline R. DesJardins-Park, Audrey H. Effenberger, Felipe N. Flores, M. A. Giles, Emma Y. He, Nike S. Izmaylov, ChangWon C. Lee, Nicholas A. Pagel, Krystal K Phu, Leah U. Rosen, Danielle A. Seda, Yong Shen, Santiago Vargas, Andrew W. Murray, Eden Abebe, Sunia A. Trauger, David A. Donoso, Miguel Vences, Lauren A. O’Connell
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0108843

Negative Effects of an Exotic Grass Invasion on Small-Mammal Communities
Cited by: 42
Author(s): Eric D. Freeman, Tiffanny R. Sharp, Randy T. Larsen, Rob Knight, Steven J. Slater, Brock R. McMillan
Software Mentions: 2
Published: about 12 years ago

10.1371/journal.pone.0135928

Plant Size as Determinant of Species Richness of Herbivores, Natural Enemies and Pollinators across 21 Brassicaceae Species
Cited by: 38
Author(s): Hella Schlinkert, Catrin Westphal, Yann Clough, Zsuzsanna László, Martin Ludwig, Teja Tscharntke
Software Mentions: 2
Published: about 11 years ago

10.1371/journal.pone.0250695

Description and comparison of the skin and ear canal microbiota of non-allergic and allergic German shepherd dogs using next generation sequencing
Cited by: 6
Author(s): Neoklis Apostolopoulos, Stefanie P. Glaeser, Ruchi Bagwe, Stefan Janssen, Ursula Mayer, Christa Ewers, Peter Kämpfer, Reto Neiger, Nina Thom
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0228165

Distinct temporal diversity profiles for nitrogen cycling genes in a hyporheic microbiome
Cited by: 11
Author(s): Karen E. Nelson, Emily B. Graham, Alex R. Crump, Sarah Fansler, Evan Arntzen, David W. Kennedy, James C. Stegen
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0222048

Effects of foliar application of amino acid liquid fertilizers, with or without Bacillus amyloliquefaciens SQR9, on cowpea yield and leaf microbiota
Cited by: 20
Author(s): Dongsheng Wang, Xuhui Deng, Bei Wang, Na Zhang, Chengzhi Zhu, Zixuan Jiao, Rong Li
Software Mentions: 2
Published: about 7 years ago

10.1038/s41598-018-34106-2

Bacterial and archaeal community structures in perennial cave ice
Cited by: 27
Author(s): Corina Ițcuș, Madalina D. Pascu, Paris Lavín, Aurel Perşoiu, Lavinia Iancu, Cristina Purcarea
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-018-34896-5

Functional recovery of a subtropical evergreen-deciduous broadleaved mixed forest following clear cutting in central China
Cited by: 8
Author(s): Yongtao Huang, Xiao Zhang, Runguo Zang, Shenglei Fu, Xunru Ai, Lan Yao, Yi Ding, Jihong Huang, Xinghui Lu
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0199343

Seasonality modulates the predictive skills of diatom based salinity transfer functions
Cited by: 5
Author(s): Alejandra Goldenberg-Vilar, Timme H. Donders, Aleksandra Cvetkoska, Friederike Wagner-Cremer
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-018-35057-4

Combining fish and benthic communities into multiple regimes reveals complex reef dynamics
Cited by: 30
Author(s): Mary K. Donovan, Alan M. Friedlander, Joey Lecky, Jean-Baptiste Jouffray, Gareth J. Williams, Lisa M. Wedding, Larry B. Crowder, A. S. Erickson, Nicholas A. J. Graham, Jamison M. Gove, Carrie V. Kappel, Kendra Karr, John N. Kittinger, Albert V. Norström, Magnus Nyström, Kirsten L.L. Oleson, Kostantinos A. Stamoulis, Crow White, Ivor D. Williams, Kimberly A. Selkoe
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41598-018-35410-7

Partitioning beta diversity in a tropical karst seasonal rainforest in Southern China
Cited by: 18
Author(s): Yili Guo, Wenhua Xiang, Bin Wang, Dongxing Li, Azim U. Mallik, Han Y. H. Chen, Fuzhao Huang, Tao Ding, Shujun Wen, Sihua Lü, Xiankun Li
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pone.0189731

Temporal and spatial differences between taxonomic and trait biodiversity in a large marine ecosystem: Causes and consequences
Cited by: 24
Author(s): Tim Spaanheden Dencker, Laurène Pécuchet, Esther Beukhof, Katherine Richardson, Mark Payne, Martin Lindegren
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.pone.0037741

Who Eats Whom in a Pool? A Comparative Study of Prey Selectivity by Predatory Aquatic Insects
Cited by: 88
Author(s): Jan Klečka, David S. Boukal
Software Mentions: 2
Published: over 14 years ago

10.1371/journal.pone.0202270

The microbiota of hematophagous ectoparasites collected from migratory birds
Cited by: 18
Author(s): Francesco Cerutti, Paola Modesto, F. Rizzo, Alessandra Cravero, Irena Jurman, Stefano Costa, Mauro Giammarino, Maria Lucia Mandola, Maria Goria, Slobodanka Radović, Federica Cattonaro, Pier Luigi Acutis, Simone Peletto
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-018-36971-3

Plant-microbe interactions before drought influence plant physiological responses to subsequent severe drought
Cited by: 36
Author(s): Danielle Ulrich, Sanna Sevanto, Max Ryan, Michaeline B. N. Albright, Renee Johansen, John Dunbar
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-018-37298-9

Close social relationships correlate with human gut microbiota composition
Cited by: 123
Author(s): Kimberly A. Dill‐McFarland, Zheng-Zheng Tang, Julia H. Kemis, Robert L. Kerby, Guanhua Chen, Alberto Palloni, Thomas J. Sorenson, Federico E. Rey, Pamela Herd
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-018-37565-9

Environmental filtering of bacterial functional diversity along an aridity gradient
Cited by: 14
Author(s): Huacan Song, Yu Shi, Teng Yang, Haiyan Chu, Jin‐Sheng He, Hyoki Kim, Piotr G. Jabłoński, Jonathan M. Adams
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0056710

454 Pyrosequencing Analysis on Faecal Samples from a Randomized DBPC Trial of Colicky Infants Treated with Lactobacillus reuteri DSM 17938
Cited by: 90
Author(s): Stefan Roos, Johan Dicksved, Valentina Tarasco, Emanuela Locatelli, Fulvio Ricceri, Ulf Grandin, Francesco Savino
Software Mentions: 2
Published: over 13 years ago

10.1038/s41598-018-37851-6

Risk of biodiversity collapse under climate change in the Afro-Arabian region
Cited by: 24
Author(s): Alaa Eldin Soultan, Martin Wikelski, Kamran Safi
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0233733

Stream fish metacommunity organisation across a Neotropical ecoregion: The role of environment, anthropogenic impact and dispersal-based processes
Cited by: 21
Author(s): Pedro Paulino Borges, Murilo S. Dias, Fernando Rogério Carvalho, Lílian Casatti, Paulo Santos Pompeu, Maurício Cetra, Francisco Leonardo Tejerina‐Garro, Yzél Rondon Súarez, João Carlos Nabout, Fabrício Barreto Teresa
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-018-37062-z

Interactions within the microbiome alter microbial interactions with host chemical defences and affect disease in a marine holobiont
Cited by: 52
Author(s): Sharon R. Longford, Alexandra H. Campbell, Shaun Nielsen, Rebecca J. Case, Staffan Kjelleberg, Peter D. Steinberg
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0124807

Riverine Landscape Patch Heterogeneity Drives Riparian Ant Assemblages in the Scioto River Basin, USA
Cited by: 18
Author(s): Paradzayi Tagwireyi, Sean Sullivan
Software Mentions: 2
Published: over 11 years ago