10.3389/fmicb.2016.00773

Evaluation of Strategies to Separate Root-Associated Microbial Communities: A Crucial Choice in Rhizobiome Research
Cited by: 46
Author(s): Tim Richter-Heitmann, Thilo Eickhorst, Stefan Knauth, Michael W. Friedrich, Hannes Schmidt
Software Mentions: 2
Published: over 10 years ago

10.1038/s41598-018-30901-z

Comparison of microbiomes of cold-water corals Primnoa pacifica and Primnoa resedaeformis, with possible link between microbiome composition and host genotype
Cited by: 16
Author(s): Dawn B. Goldsmith, Christina A. Kellogg, Cheryl L. Morrison, Michael A. Gray, Robert P. Stone, Rhian G. Waller, Sandra Brooke, Steve W. Ross
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-018-30428-3

Gut microbiota composition and butyrate production in children affected by non-IgE-mediated cow’s milk allergy
Cited by: 71
Author(s): Roberto Berni Canani, Francesca De Filippis, Rita Nocerino, Lorella Paparo, Carmen Di Scala, Linda Cosenza, Giusy Della Gatta, Antonio Calignano, Carmen De, Manolo Laiola, Jack A. Gilbert
Software Mentions: 2
Published: about 8 years ago

10.3390/md18020097

Carrageenans from the Red Seaweed Sarconema filiforme Attenuate Symptoms of Diet-Induced Metabolic Syndrome in Rats
Cited by: 37
Author(s): Ryan du Preez, Nicholas A. Paul, Peter Mouatt, Marwan E. Majzoub, Torsten Thomas, Sunil K. Panchal, Lindsay Brown
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-018-30689-y

A detailed investigation of the porcine skin and nose microbiome using universal and Staphylococcus specific primers
Cited by: 36
Author(s): Mikael Lenz Strube, Julie Elvekjær Hansen, Sophia Rasmussen, Karl Pedersen
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0174582

Spatio-temporal variation of fish taxonomic composition in a South-East Asian flood-pulse system
Cited by: 34
Author(s): Heng Kong, Mathieu Chevalier, Pascal Laffaille, Sovan Lek
Software Mentions: 2
Published: over 9 years ago

10.1038/s41598-018-31382-w

The phylogenetic relationships and species richness of host-specific Dactylogyrus parasites shaped by the biogeography of Balkan cyprinids
Cited by: 25
Author(s): Michal Benovics, Yves Desdevises, Jasna Vukić, Radek Šanda, Andrea Vetešníková Šimková
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-018-31706-w

Bacterial communities and potential waterborne pathogens within the typical urban surface waters
Cited by: 47
Author(s): Decai Jin, Xiao Kong, Bingjian Cui, Shulan Jin, Yonghong Xie, Xingrun Wang, Ye Deng
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-018-31731-9

Habitat environments impacted the gut microbiome of long-distance migratory swan geese but central species conserved
Cited by: 51
Author(s): Yueni Wu, Yefeng Yang, Lei Cao, Huaqun Yin, Meiying Xu, Zhujun Wang, Yangying Liu, Xin Wang, Ye Deng
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0256733

Reconciling the Chicago River for birds and people
Cited by: 0
Author(s): Alexis D. Smith
Software Mentions: 2
Published: about 5 years ago

10.3389/fmicb.2021.657542

Effects of Clostridium butyricum, Sodium Butyrate, and Butyric Acid Glycerides on the Reproductive Performance, Egg Quality, Intestinal Health, and Offspring Performance of Yellow-Feathered Breeder Hens
Cited by: 16
Author(s): Yibing Wang, Yang Wang, Xuhui Lin, Zhongyong Gou, Qiuli Fan, Sufei Jiang
Software Mentions: 2
Published: about 5 years ago

10.7717/peerj.3620

Urbanization alters communities of flying arthropods in parks and gardens of a medium-sized city
Cited by: 44
Author(s): Edward Lagucki, Justin D. Burdine, Kevin E. McCluney
Software Mentions: 2
Published: about 9 years ago

10.1038/s41598-018-31738-2

The gastric mucosal-associated microbiome in patients with gastric polyposis
Cited by: 13
Author(s): Rongrong Ren, Zikai Wang, Huaibo Sun, Xuefeng Gao, Gang Sun, Lihua Peng, Bin Yan, Yunsheng Yang
Software Mentions: 2
Published: about 8 years ago

10.3390/ani10060935

Ruminal Methanogenic Responses to the Thiamine Supplementation in High-Concentrate Diets
Cited by: 2
Author(s): Fuguang Xue, Yue Wang, Yiguang Zhao, Xuemei Nan, Dengke Hua, Fuyu Sun, Liguo Yang, Linshu Jiang, Benhai Xiong
Software Mentions: 2
Published: over 6 years ago

10.1155/2021/8894455

Performance Analysis and Microbial Community Evolution of In Situ Biological Biogas Upgrading with Increasing H2/CO2 Ratio
Cited by: 7
Author(s): Viola Corbellini, Feng Chen, Micol Bellucci, Arianna Catenacci, Tatiana Stella, Anna Espinoza-Tofalos, Francesca Malpei
Software Mentions: 2
Published: over 5 years ago

10.3390/nu13030713

Multiple Selection Criteria for Probiotic Strains with High Potential for Obesity Management
Cited by: 16
Author(s): Jeanne Alard, Benoît Cudennec, Denise Boutillier, Véronique Peucelle, Amandine Descat, Raphael Decoin, Sarah Kuylle, Amin Jablaoui, Moez Rhimi, Isabelle Wolowczuk, Bruno Pot, Anne Tailleux, Emmanuelle Maguin, Sophie Holowacz, Corinne Grangette
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2018.02708

Roots and Panicles of the C4 Model Grasses Setaria viridis (L). and S. pumila Host Distinct Bacterial Assemblages With Core Taxa Conserved Across Host Genotypes and Sampling Sites
Cited by: 11
Author(s): Carolina Escobar Rodríguez, Birgit Mitter, Livio Antonielli, Friederike Trognitz, Stéphane Compant, Angela Sessitsch
Software Mentions: 2
Published: almost 8 years ago

10.3390/md16060216

Dietary Supplementation with a Magnesium-Rich Marine Mineral Blend Enhances the Diversity of Gastrointestinal Microbiota
Cited by: 37
Author(s): Evelyn M. Crowley, Caitríona M. Long-Smith, Amy Murphy, Elaine Patterson, Kiera Murphy, Denise M. O’Gorman, Catherine Stanton, Yvonne M. Nolan
Software Mentions: 2
Published: about 8 years ago

10.3390/md19080404

Bacillus amyloliquefaciens-9 Reduces Somatic Cell Count and Modifies Fecal Microbiota in Lactating Goats
Cited by: 3
Author(s): Yongtao Li, Nannan Jiang, Wenying Zhang, Zhengbing Lv, Jianxin Liu, Hengbo Shi
Software Mentions: 2
Published: about 5 years ago

10.1186/s12898-019-0225-0

The effect of buffer strip width and selective logging on streamside plant communities
Cited by: 22
Author(s): Anna Oldén, Ville Selonen, E. Lehkonen, Janne S. Kotiaho
Software Mentions: 2
Published: over 7 years ago

10.7717/peerj.3743

Growth, stoichiometry and cell size; temperature and nutrient responses in haptophytes
Cited by: 18
Author(s): Lars Fredrik Skau, Tom Andersen, Jan‐Erik Thrane, Dag O. Hessen
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0225630

Estimating the degree to which distance and temperature differences drive changes in fish community composition over time in the upper Mississippi River
Cited by: 0
Author(s): James H. Larson, Jon M. Vallazza, Brent C. Knights
Software Mentions: 2
Published: almost 7 years ago

10.3390/ijms21228700

Integrated Proteo-Transcriptomic Analyses Reveal Insights into Regulation of Pollen Development Stages and Dynamics of Cellular Response to Apple Fruit Crinkle Viroid (AFCVd)-Infection in Nicotiana tabacum
Cited by: 2
Author(s): Ankita Shrestha, Ajay Kumar Mishra, J. Matoušek, Lenka Steinbachová, David Potěšil, Vishnu Sukumari Nath, Praveen Awasthi, Tomáš Kocábek, Jernej Jakše, Lenka Záveská Drábková, Zbyněk Zdráhal, David Honys, Gerhard Steger
Software Mentions: 2
Published: almost 6 years ago

10.7717/peerj.11075

Limited influence of marine sediment lyophilization on prokaryotic community structure assessed via amplicon sequencing: an example from environmentally contrasted sediment layers in Toulon harbor (France)
Cited by: 0
Author(s): Benjamin Misson, Cédric Garnier, Alexandre J. Poulain
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0198225

Illumina sequencing analysis of the ruminal microbiota in high-yield and low-yield lactating dairy cows
Cited by: 51
Author(s): Jinjin Tong, Hua Zhang, Dongyan Yang, Yonghong Zhang, Benhai Xiong, Linshu Jiang
Software Mentions: 2
Published: almost 8 years ago

10.3390/ijms22020602

Transposable Elements and Teleost Migratory Behaviour
Cited by: 8
Author(s): Elisa Carotti, Federica Carducci, Adriana Canapa, Marco Barucca, Samuele Greco, Marco Gerdol, Maria Assunta Biscotti
Software Mentions: 2
Published: over 5 years ago

10.3389/fmicb.2017.01231

Aquarium Viromes: Viromes of Human-Managed Aquatic Systems
Cited by: 26
Author(s): Yiseul Kim, William Van Bonn, Tiong Gim Aw, Joan B. Rose
Software Mentions: 2
Published: about 9 years ago

10.1007/s00227-018-3321-3

Ocean acidification and desalination: climate-driven change in a Baltic Sea summer microplanktonic community
Cited by: 16
Author(s): Angela Wulff, Maria Karlberg, Malin Olofsson, Anders Torstensson, Lasse Riemann, Franciska S. Steinhoff, Malin Mohlin, Nina Ekstrand, Melissa Chierici
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-018-34106-2

Bacterial and archaeal community structures in perennial cave ice
Cited by: 27
Author(s): Corina Ițcuș, Madalina D. Pascu, Paris Lavín, Aurel Perşoiu, Lavinia Iancu, Cristina Purcarea
Software Mentions: 2
Published: almost 8 years ago

10.3389/fmicb.2020.572017

Impact of Terrestrial Input on Deep-Sea Benthic Archaeal Community Structure in South China Sea Sediments
Cited by: 4
Author(s): Dengxun Lai, Brian P. Hedlund, Wei Xie, Jingjing Liu, Tommy J. Phelps, Chuanlun Zhang, Peng Wang
Software Mentions: 2
Published: almost 6 years ago

10.1002/lno.11157

Ecology of a polymetallic nodule occurrence gradient: Implications for deep‐sea mining
Cited by: 61
Author(s): Erik Simon-Lledó, Brian J. Bett, Veerle Huvenne, Timm Schoening, Noëlie M.A. Benoist, Daniel O. B. Jones
Software Mentions: 2
Published: over 7 years ago

10.7717/peerj.5208

Marine cyanolichens from different littoral zones are associated with distinct bacterial communities
Cited by: 21
Author(s): Nyree J. West, Delphine Parrot, Claire Fayet, Martín Grube, Sophie Tomasi, Marcelino T. Suzuki
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0168152

Response of Bacteria Community to Long-Term Inorganic Nitrogen Application in Mulberry Field Soil
Cited by: 11
Author(s): Chengqun Yu, Xingming Hu, Ding Wen, Yong Li, Guangming Han, Chao Xiong
Software Mentions: 2
Published: almost 10 years ago

10.3389/fmicb.2019.01821

Community Composition and Diversity of Intestinal Microbiota in Captive and Reintroduced Przewalski’s Horse (Equus ferus przewalskii)
Cited by: 22
Author(s): Yimeng Li, Ke Zhang, Yang Liu, Kai Li, Defu Hu, Torsten Wronski
Software Mentions: 2
Published: about 7 years ago

10.1038/s41598-018-34896-5

Functional recovery of a subtropical evergreen-deciduous broadleaved mixed forest following clear cutting in central China
Cited by: 8
Author(s): Yongtao Huang, Xiao Zhang, Runguo Zang, Shenglei Fu, Xunru Ai, Lan Yao, Yi Ding, Jihong Huang, Xinghui Lu
Software Mentions: 2
Published: almost 8 years ago

10.1111/bpa.12697

Degeneration of dopaminergic circuitry influences depressive symptoms in Lewy body disorders
Cited by: 24
Author(s): Lina Patterson, Steven Rushton, Johannes Attems, Alan Thomas, Christopher M. Morris
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-018-35057-4

Combining fish and benthic communities into multiple regimes reveals complex reef dynamics
Cited by: 30
Author(s): Mary K. Donovan, Alan M. Friedlander, Joey Lecky, Jean-Baptiste Jouffray, Gareth J. Williams, Lisa M. Wedding, Larry B. Crowder, A. S. Erickson, Nicholas A. J. Graham, Jamison M. Gove, Carrie V. Kappel, Kendra Karr, John N. Kittinger, Albert V. Norström, Magnus Nyström, Kirsten L.L. Oleson, Kostantinos A. Stamoulis, Crow White, Ivor D. Williams, Kimberly A. Selkoe
Software Mentions: 2
Published: almost 8 years ago

10.1017/S0007114516001045

Modulation of gut microbiota dysbioses in type 2 diabetic patients by macrobiotic Ma-Pi 2 diet
Cited by: 164
Author(s): Marco Candela, Elena Biagi, Matteo Soverini, Clarissa Consolandi, Sara Quercia, Marco Severgnini, Clelia Peano, Silvia Turroni, Simone Rampelli, Paolo Pozzilli, Mario Pianesi, F. Fallucca, Patrizia Brigidi
Software Mentions: 2
Published: over 10 years ago

10.3389/fmicb.2019.00168

Rapid Transfer of Plant Photosynthates to Soil Bacteria via Ectomycorrhizal Hyphae and Its Interaction With Nitrogen Availability
Cited by: 88
Author(s): Stefan Gorka, Marlies Dietrich, Werner Mayerhofer, Raphael Gabriel, Julia Wiesenbauer, Victoria Martin, Qing Zheng, Bruna Imai, Judith Prommer, Marieluise Weidinger, Peter Schweiger, Stephanie A. Eichorst, Michael Wagner, Andreas Richter, Arno Schintlmeister, Dagmar Woebken, Christina Kaiser
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-018-35410-7

Partitioning beta diversity in a tropical karst seasonal rainforest in Southern China
Cited by: 18
Author(s): Yili Guo, Wenhua Xiang, Bin Wang, Dongxing Li, Azim U. Mallik, Han Y. H. Chen, Fuzhao Huang, Tao Ding, Shujun Wen, Sihua Lü, Xiankun Li
Software Mentions: 2
Published: almost 8 years ago

10.7150/ijbs.37421

Gut Microbiota as Diagnostic Tools for Mirroring Disease Progression and Circulating Nephrotoxin Levels in Chronic Kidney Disease: Discovery and Validation Study
Cited by: 54
Author(s): I‐Wen Wu, Chan‐Yu Lin, Lun‐Ching Chang, Chin‐Chan Lee, Chih‐Yung Chiu, Heng-Jung Hsu, Chiao‐Yin Sun, Yuen-Chan Chen, Ya‐Huei Kuo, Chin‐Wei Yang, Sheng-Siang Gao, Wu‐Chiao Hsieh, Wen‐Hung Chung, Hsin-Chih Lai, Shih‐Chi Su
Software Mentions: 2
Published: over 6 years ago

10.3390/nu12072088

Sex-Specific Differences in the Gut Microbiome in Response to Dietary Fiber Supplementation in IL-10-Deficient Mice
Cited by: 16
Author(s): Zhengxiao Zhang, Jae Eun Hyun, Aducio Thiesen, Heekuk Park, Naomi Hotte, Hikaru Watanabe, Takanobu Higashiyama, Karen Madsen
Software Mentions: 2
Published: about 6 years ago

10.1111/eva.12723

Challenges of next‐generation sequencing in conservation management: Insights from long‐term monitoring of corridor effects on the genetic diversity of mouse lemurs in a fragmented landscape
Cited by: 9
Author(s): B. Karina Montero, Refaly Ernest, Jean‐Baptiste Ramanamanjato, Faly Randriatafika, S. Jacques Rakotondranary, Kerstin Wilhelm, Jörg U. Ganzhorn, Simone Sommer
Software Mentions: 2
Published: almost 8 years ago

10.1111/eva.12891

Landscape genomics predicts climate change‐related genetic offset for the widespread <i>Platycladus orientalis</i> (Cupressaceae)
Cited by: 42
Author(s): Kai‐Hua Jia, Zhao Wang, Paul A. Maier, Xinxin Hu, Yuqing Jin, Shanshan Zhou, Si-Qian Jiao, Yousry A. El‐Kassaby, Xiaoru Wang, Jian‐Feng Mao
Software Mentions: 2
Published: almost 7 years ago

10.1186/s40529-021-00322-9

Agricultural management and cultivation period alter soil enzymatic activity and bacterial diversity in litchi (Litchi chinensis Sonn.) orchards
Cited by: 2
Author(s): Yu-Pei Chen, Chia-Fang Tsai, Asif Hameed, Yu-Jen Chang, Chiu-Chung Young
Software Mentions: 2
Published: almost 5 years ago

10.1038/s41598-018-36971-3

Plant-microbe interactions before drought influence plant physiological responses to subsequent severe drought
Cited by: 36
Author(s): Danielle Ulrich, Sanna Sevanto, Max Ryan, Michaeline B. N. Albright, Renee Johansen, John Dunbar
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-018-37298-9

Close social relationships correlate with human gut microbiota composition
Cited by: 123
Author(s): Kimberly A. Dill‐McFarland, Zheng-Zheng Tang, Julia H. Kemis, Robert L. Kerby, Guanhua Chen, Alberto Palloni, Thomas J. Sorenson, Federico E. Rey, Pamela Herd
Software Mentions: 2
Published: over 7 years ago

10.3390/ani9121052

Spider Monkeys Rule the Roost: Ateline Sleeping Sites Influence Rainforest Heterogeneity
Cited by: 8
Author(s): Andrew Whitworth, Lawrence Whittaker, Ruthmery Pillco Huarcaya, Eleanor Flatt, Marvin López Morales, Danielle Connor, Marina Garrido Priego, Adrian Forsyth, Christopher Beirne
Software Mentions: 2
Published: almost 7 years ago

10.1186/s40529-020-00292-4

Evolutionary correlation of water-related traits between different structures of Dendrobium plants
Cited by: 4
Author(s): Mintao Sun, Chun-Hui Feng, Zhenya Liu, Kang Tian
Software Mentions: 2
Published: over 6 years ago

10.1155/2016/5916067

Methanogen Diversity in Indigenous and Introduced Ruminant Species on the Tibetan Plateau
Cited by: 28
Author(s): Xiaowu Huang, Gonzalo Martínez Fernández, Jagadish Padmanabha, Ruijun Long, Stuart E. Denman, Christopher S. McSweeney
Software Mentions: 2
Published: over 10 years ago

10.1038/s41598-018-37565-9

Environmental filtering of bacterial functional diversity along an aridity gradient
Cited by: 14
Author(s): Huacan Song, Yu Shi, Teng Yang, Haiyan Chu, Jin‐Sheng He, Hyoki Kim, Piotr G. Jabłoński, Jonathan M. Adams
Software Mentions: 2
Published: over 7 years ago

10.7717/peerj.6460

Considerations for studying transmission of antimicrobial resistant enteric bacteria between wild birds and the environment on intensive dairy and beef cattle operations
Cited by: 5
Author(s): Kristin Tormoehlen, Yvette J. Johnson-Walker, Emily W. Lankau, Maung San Myint, John A. Herrmann
Software Mentions: 2
Published: over 7 years ago

10.1186/s40793-019-0350-6

Characterization of the microbiome associated with in situ earthen materials
Cited by: 1
Author(s): Alexis Simons, Alexandra Bertron, Jean‐Emmanuel Aubert, Christophe Roux, Christine Roques
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-018-37851-6

Risk of biodiversity collapse under climate change in the Afro-Arabian region
Cited by: 24
Author(s): Alaa Eldin Soultan, Martin Wikelski, Kamran Safi
Software Mentions: 2
Published: over 7 years ago

10.3390/ani11082461

Environment-Dependent Variation in Gut Microbiota of an Oviparous Lizard (Calotes versicolor)
Cited by: 6
Author(s): Zhihong Lin, Fang Yang, Ning Li, Buddhi Dayananda
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-018-37062-z

Interactions within the microbiome alter microbial interactions with host chemical defences and affect disease in a marine holobiont
Cited by: 52
Author(s): Sharon R. Longford, Alexandra H. Campbell, Shaun Nielsen, Rebecca J. Case, Staffan Kjelleberg, Peter D. Steinberg
Software Mentions: 2
Published: over 7 years ago

10.1002/btpr.2540

Bacterial community analysis in upflow multilayer anaerobic reactor treating high-solids organic wastes
Cited by: 0
Author(s): Si-Kyung Cho, Kyung‐Won Jung, Dong-Hoon Kim, Joong-Chun Kwon, Umer Zeeshan Ijaz, Seung Gu Shin
Software Mentions: 2
Published: about 9 years ago

10.7717/peerj.5289

Trends in bacterial and fungal communities in ant nests observed with Terminal-Restriction Fragment Length Polymorphism (T-RFLP) and Next Generation Sequencing (NGS) techniques—validity and compatibility in ecological studies
Cited by: 20
Author(s): Stafva Lindström, Owen Rowe, Sari Timonen, Liselotte Sundström, Helena Johansson
Software Mentions: 2
Published: about 8 years ago

10.1371/journal.pone.0052109

High Bee and Wasp Diversity in a Heterogeneous Tropical Farming System Compared to Protected Forest
Cited by: 26
Author(s): Christof Schüepp, Sarah Rittiner, Martin H. Entling
Software Mentions: 2
Published: over 13 years ago

10.1111/jfb.14176

The future of fish‐based ecological assessment of European rivers: from traditional EU Water Framework Directive compliant methods to eDNA metabarcoding‐based approaches
Cited by: 39
Author(s): Didier Pont, Alice Valentini, Mathieu Rocle, Anthony Maire, Olivier Delaigue, Pauline Jean, Tony Déjean
Software Mentions: 2
Published: almost 7 years ago

10.1038/s41598-018-38344-2

Leaf-associated microbiomes of grafted tomato plants
Cited by: 41
Author(s): Hirokazu Toju, Koji Okayasu, Michitaka Notaguchi
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2021.664120

The Impact of Fertilizer Amendments on Soil Autotrophic Bacteria and Carbon Emissions in Maize Field on the Semiarid Loess Plateau
Cited by: 5
Author(s): Jinbin Wang, Junhong Xie, Lingling Li, Zhen Luo, Renzhi Zhang, Linlin Wang, Yuji Jiang
Software Mentions: 2
Published: over 5 years ago

10.3390/toxics9030054

Microbial Population Dynamics in Model Sewage Treatment Plants and the Fate and Effect of Gold Nanoparticles
Cited by: 3
Author(s): Karsten Schlich, Cecilia Díaz, Benjamin Gomez Pizarro, B Knopf, Ruben Schlinkert, Franziska Wege, Anne Jurack, Kerstin Hund‐Rinke
Software Mentions: 2
Published: over 5 years ago

10.1111/eva.12256

Patterns of domestication in the Ethiopian oil‐seed crop noug (<i>Guizotia abyssinica</i>)
Cited by: 10
Author(s): Hannes Dempewolf, Misteru Tesfaye, Abel Teshome, Anne D. Bjorkman, Rose L. Andrew, Moira Scascitelli, Scott Black, Endashaw Bekele, Johannes Engels, Quentin Cronk, Loren H. Rieseberg
Software Mentions: 2
Published: over 11 years ago

10.7717/peerj.11520

Dynamics of rumen bacterial composition of yak (<i>Bos grunniens</i>) in response to dietary supplements during the cold season
Cited by: 6
Author(s): Anum Ali Ahmad, Jian Bo Zhang, Linhao Zhong, Chao Yang, Qudratullah Kalwar, Tariq Shah, Mei Du, Ishaq Muhammad, Juanshan Zheng, Ping Yan, Xuezhi Ding, Ruijun Long
Software Mentions: 2
Published: over 5 years ago

10.3390/ijms22063253

The Multifunctional Sactipeptide Ruminococcin C1 Displays Potent Antibacterial Activity In Vivo as Well as Other Beneficial Properties for Human Health
Cited by: 11
Author(s): Clarisse Roblin, Steve Chiumento, Cédric Jacqueline, Eric Pinloche, Cendrine Nicoletti, Hamza Olleik, Élise Courvoisier-Dezord, Agnès Amouric, Christian Basset, Louis Dru, Marie Ollivier, Aurélie Bogey-Lambert, Nicolás Vidal, Mohamed Atta, Marc Maresca, Estelle Devillard, Victor Duarte, Josette Perrier, Mickaël Lafond
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0159396

Phylogeographic Analysis of Blastomyces dermatitidis and Blastomyces gilchristii Reveals an Association with North American Freshwater Drainage Basins
Cited by: 35
Author(s): Lisa R. McTaggart, Elizabeth M. Brown, Susan E. Richardson
Software Mentions: 2
Published: about 10 years ago

10.1038/s41598-019-39603-6

Effects of naphthalene on soil fauna abundance and enzyme activity in the subalpine forest of western Sichuan, China
Cited by: 9
Author(s): Yuwei Liu, Fan Yang, Wanqin Yang, Fuzhong Wu, Zhenfeng Xu, Yang Liu, Li Zhang, Kai Yue, Xiangyin Ni, Liying Lan, Ya Chen
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-019-39399-5

Optimizing environmental DNA sampling effort for fish inventories in tropical streams and rivers
Cited by: 77
Author(s): Isabel Cantera, Kévin Cilleros, Alice Valentini, Axel Cerdan, Tony Déjean, Amaia Iribar, Pierre Taberlet, Régis Vigouroux, Sébastien Brosse
Software Mentions: 2
Published: over 7 years ago

10.3390/toxics9080190

Negative Consequences on the Growth, Morphometry, and Community Structure of the Kelp Macrocystis pyrifera (Phaeophyceae, Ochrophyta) by a Short Pollution Pulse of Heavy Metals and PAHs
Cited by: 5
Author(s): Roddy Jara-Yáñez, Andrés Meynard, Gladys Acosta, Nicolás Latorre-Padilla, Carolina Oyarzo-Miranda, Francisco Castañeda, Florentina Piña, Jorge Rivas, Cristian Bulboa, Loretto Contreras–Porcia
Software Mentions: 2
Published: about 5 years ago

10.3390/ijms22073343

Lantibiotics Produced by Oral Inhabitants as a Trigger for Dysbiosis of Human Intestinal Microbiota
Cited by: 5
Author(s): Hideo Yonezawa, Mizuho Motegi, Atsushi Oishi, Fuhito Hojo, Seiya Higashi, Eriko Nozaki, Koichiro Oka, Motomichi Takahashi, Takako Osaki, Shigeru Kamiya
Software Mentions: 2
Published: over 5 years ago

10.1186/1472-6785-13-13

Insights into biodiversity sampling strategies for freshwater microinvertebrate faunas through bioblitz campaigns and DNA barcoding
Cited by: 18
Author(s): Brandon J. Laforest, Amanda K. Winegardner, Omar A. Zaheer, Nicholas W. Jeffery, Elizabeth E. Boyle, Sarah J. Adamowicz
Software Mentions: 2
Published: over 13 years ago

10.1038/s41598-019-40150-3

Resilience of Central Pacific reefs subject to frequent heat stress and human disturbance
Cited by: 19
Author(s): Simon D. Donner, Jessica Carilli
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2012.00260

Ecology and Biogeography of Bacterial Communities Associated with Chloroethene-Contaminated Aquifers
Cited by: 18
Author(s): Pierre Rossi, Noam Shani, Florian Köhler, Gwenaël Imfeld, Christof Holliger
Software Mentions: 2
Published: over 14 years ago

10.1038/s41598-019-40347-6

Intensity of Nosema ceranae infection is associated with specific honey bee gut bacteria and weakly associated with gut microbiome structure
Cited by: 62
Author(s): Andrey Rubanov, Kaleigh A. Russell, Jason A. Rothman, James C. Nieh, Quinn S. McFrederick
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2017.01312

Eelgrass Leaf Surface Microbiomes Are Locally Variable and Highly Correlated with Epibiotic Eukaryotes
Cited by: 37
Author(s): Mia M. Bengtsson, Anton Bühler, Anne Bräuer, Sven Dahlke, Hendrik Schubert, Irmgard Blindow
Software Mentions: 2
Published: about 9 years ago

10.1186/s13068-021-02004-x

Fungal deterioration of the bagasse storage from the harvested sugarcane
Cited by: 4
Author(s): Na Peng, Ziting Yao, Ziting Wang, Jiangfeng Huang, Muhammad Tahir Khan, Baoshan Chen, Muqing Zhang
Software Mentions: 2
Published: about 5 years ago

10.1007/s00203-021-02196-8

Impacts of replanting American ginseng on fungal assembly and abundance in response to disease outbreaks
Cited by: 19
Author(s): Ji Li, Lei Tian, Fahad Nasir, Jingjing Chang, Chunguang Chang, Jianfeng Zhang, Xiujun Li, Chunjie Tian
Software Mentions: 2
Published: over 5 years ago

10.3390/ijms22105309

Dadaist2: A Toolkit to Automate and Simplify Statistical Analysis and Plotting of Metabarcoding Experiments
Cited by: 10
Author(s): Rebecca Ansorge, Giovanni Birolo, Stephen A. James, Andrea Telatin
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-41195-0

Diabetic cats have decreased gut microbial diversity and a lack of butyrate producing bacteria
Cited by: 37
Author(s): Ida Nordang Kieler, Melania Osto, Leoni Hugentobler, Lara Puetz, M. Thomas P. Gilbert, Torben Hansen, Oluf Pedersen, Claudia E Reusch, Eric Zini, Thomas Lutz, Charlotte Reinhard Bjørnvad
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0112942

Müllerian Mimicry as a Result of Codivergence between Velvet Ants and Spider Wasps
Cited by: 15
Author(s): Juanita Rodríguez, James P. Pitts, Carol D. von Dohlen, Joseph S. Wilson
Software Mentions: 2
Published: almost 12 years ago

10.3390/biom9050187

Profiling the Bacterial Diversity in a Typical Karst Tiankeng of China
Cited by: 15
Author(s): Gaozhong Pu, Yanna Lv, Lina Dong, Lihua Zhou, Kechao Huang, Danjuan Zeng, Ling Mo, Guangping Xu
Software Mentions: 2
Published: over 7 years ago

10.3390/biom9090390

Dose-Dependent Alterations to In Vitro Human Microbiota Composition and Butyrate Inhibition by a Supercritical Carbon Dioxide Hops Extract
Cited by: 10
Author(s): Paul Blatchford, Shanthi G. Parkar, Wendy Hopkins, John R. Ingram, Kevin H. Sutton
Software Mentions: 2
Published: about 7 years ago

10.1038/s41598-019-41738-5

The potential probiotic Lactobacillus rhamnosus CNCM I-3690 strain protects the intestinal barrier by stimulating both mucus production and cytoprotective response
Cited by: 86
Author(s): Rebeca Martín, Célia Chamignon, Nadia Mhedbi-Hajri, Florian Chain, Muriel Derrien, Unai Escribano-Vázquez, Peggy Garault, Aurélie Cotillard, Hang-Phuong Pham, Christian Chervaux, Luis G. Bermúdez‐Humarán, Tamara Smokvina, Philippe Langella
Software Mentions: 2
Published: over 7 years ago

10.3390/ani9121005

Effect of Dietary Supplementation of Lactobacillus Casei YYL3 and L. Plantarum YYL5 on Growth, Immune Response and Intestinal Microbiota in Channel Catfish
Cited by: 21
Author(s): Zhang Hong-yu, Haibo Wang, Kun Hu, Liting Jiao, Minghua Zhao, Xianle Yang, L. Xia
Software Mentions: 2
Published: almost 7 years ago

10.1155/2020/5753427

The Impact of Air Pollution on Intestinal Microbiome of Asthmatic Children: A Panel Study
Cited by: 18
Author(s): Ping Zheng, Bei Zhang, Kexing Zhang, Xifang Lv, Qiang Wang, Bai Xuetao
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-019-42222-w

Gut resistome plasticity in pediatric patients undergoing hematopoietic stem cell transplantation
Cited by: 16
Author(s): Federica D’Amico, Matteo Soverini, Daniele Zama, Clarissa Consolandi, Marco Severgnini, Arcangelo Prete, Andrea Pession, Monica Barone, Silvia Turroni, Elena Biagi, Patrizia Brigidi, Riccardo Masetti, Simone Rampelli, Marco Candela
Software Mentions: 2
Published: over 7 years ago

10.3389/fmicb.2018.00705

Continuously Monocropped Jerusalem Artichoke Changed Soil Bacterial Community Composition and Ammonia-Oxidizing and Denitrifying Bacteria Abundances
Cited by: 31
Author(s): Xingang Zhou, Zhilin Wang, Huijue Jia, Li Li, Fengzhi Wu
Software Mentions: 2
Published: over 8 years ago

10.1186/s12862-016-0754-5

Inconsistent phylogeographic pattern between a sperm dependent fish and its host: in situ hybridization vs dispersal
Cited by: 13
Author(s): Roland Vergilino, Christelle Leung, Bernard Angers
Software Mentions: 2
Published: about 10 years ago

10.3389/fmicb.2016.00371

Mucus Sugar Content Shapes the Bacterial Community Structure in Thermally Stressed Acropora muricata
Cited by: 62
Author(s): Sonny T. M. Lee, Simon K. Davy, Sen‐Lin Tang, Paul S. Kench
Software Mentions: 2
Published: over 10 years ago

10.3390/ijms22137173

Influence of a High-Impact Multidimensional Rehabilitation Program on the Gut Microbiota of Patients with Multiple Sclerosis
Cited by: 12
Author(s): Monica Barone, Laura Mendozzi, Federica D’Amico, Marina Saresella, Simone Rampelli, Federica Piancone, Francesca La Rosa, Ivana Marventano, Mario Clerici, Alessia d’Arma, Luigi Pugnetti, Valentina Rossi, Marco Candela, Patrizia Brigidi, Silvia Turroni
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-019-42455-9

Comprehensive biodiversity analysis via ultra-deep patterned flow cell technology: a case study of eDNA metabarcoding seawater
Cited by: 68
Author(s): Gregory A. C. Singer, Nicole A Fahner, Joshua G Barnes, Avery McCarthy, Mehrdad Hajibabaei
Software Mentions: 2
Published: over 7 years ago

10.1007/s00203-019-01661-9

Diversity and distribution of thermophilic hydrogenogenic carboxydotrophs revealed by microbial community analysis in sediments from multiple hydrothermal environments in Japan
Cited by: 15
Author(s): Kimiho Omae, Yuto Fukuyama, Hisato Yasuda, Kenta Mise, Takashi Yoshida, Yoshihiko Sako
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-019-42609-9

Microbial Community Dynamics During Lake Ice Freezing
Cited by: 24
Author(s): Timothy Butler, Anna-Catharina Wilhelm, Amber C. Dwyer, Paige N Webb, Andrew L. Baldwin, Stephen M. Techtmann
Software Mentions: 2
Published: over 7 years ago

10.7717/peerj.3594

The effect of captivity on the skin microbial symbionts in three Atelopus species from the lowlands of Colombia and Ecuador
Cited by: 14
Author(s): Sandra V. Flechas, Ailín Blasco-Zúñiga, Andrés Merino‐Viteri, Valeria Ramírez‐Castañeda, Miryan Rivera, Adolfo Amézquita
Software Mentions: 2
Published: about 9 years ago

10.3390/ani10050879

Early-Life Intake of an Isotonic Protein Drink Improves the Gut Microbial Profile of Piglets
Cited by: 0
Author(s): Stefan G. Buzoianu, Ava Firth, CallaBria Putrino, Fábio A. Vannucci
Software Mentions: 2
Published: over 6 years ago

10.1038/s41598-019-57378-8

Genetic insights into the social organisation of the Avar period elite in the 7th century AD Carpathian Basin
Cited by: 21
Author(s): Veronika Csáky, Dániel Gerber, István Koncz, Gergely Csiky, Balázs Gusztáv Mende, Bea Szeifert, Balázs Egyed, Horolma Pamjav, Antónia Marcsik, Erika Molnár, György Paragh, András Gulyás, Bernadett Kovacsóczy, Gabriella M. Lezsák, Gábor Lőrinczy, Anna Szécsényi-Nagy, Tivadar Vida
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0053516

Unveiling Distribution Patterns of Freshwater Phytoplankton by a Next Generation Sequencing Based Approach
Cited by: 108
Author(s): Alexander Eiler, Stina Drakare, Stefan Bertilsson, Jakob Pernthaler, Sari Peura, Carina Rofner, Karel Šimek, Yang Yang, Petr Znachor, Eva S. Lindström
Software Mentions: 2
Published: over 13 years ago

10.1186/s12974-021-02123-0

Beyond the lesion site: minocycline augments inflammation and anxiety-like behavior following SCI in rats through action on the gut microbiota
Cited by: 23
Author(s): Emma K.A. Schmidt, Pamela Raposo, Abel Torres-Espín, Keith K. Fenrich, Karim Fouad
Software Mentions: 2
Published: about 5 years ago

10.3945/jn.117.248864

Human Milk Microbial Community Structure Is Relatively Stable and Related to Variations in Macronutrient and Micronutrient Intakes in Healthy Lactating Women
Cited by: 100
Author(s): Janet E. Williams, Janae M Carrothers, Kimberly A. Lackey, Nicola F Beatty, Mara A York, Sarah L Brooker, Bahman Shafii, William J. Price, Matthew L. Settles, Mark A. McGuire, Michelle K. McGuire
Software Mentions: 2
Published: about 9 years ago