10.3390/md17100578

Cultivation of Sponge-Associated Bacteria from Agelas sventres and Xestospongia muta Collected from Different Depths
Cited by: 10
Author(s): Anak Agung Gede Indraningrat, Sebastian Micheller, Mandy Runderkamp, Ina Sauerland, Leontine E. Becking, Hauke Smidt, Detmer Sipkema
Software Mentions: 3
Published: almost 7 years ago

10.1186/s12931-018-0878-9

Smoking is associated with quantifiable differences in the human lung DNA virome and metabolome
Cited by: 26
Author(s): Ann C. Gregory, Matthew B. Sullivan, Leopoldo N. Segal, Brian C. Keller
Software Mentions: 3
Published: about 8 years ago

10.3390/ijerph15040708

Abundances of Clinically Relevant Antibiotic Resistance Genes and Bacterial Community Diversity in the Weihe River, China
Cited by: 29
Author(s): Xiaojuan Wang, Jie Gu, Hua Gao, Xiaoqing Qian, Haichao Li
Software Mentions: 3
Published: over 8 years ago

10.3389/fmicb.2021.650440

Fungal Community Composition and Diversity Vary With Soil Horizons in a Subtropical Forest
Cited by: 17
Author(s): Xia Luo, Kezhong Liu, Yiming Shen, Guojing Yao, Wenge Yang, Peter E. Mortimer, Heng Gui
Software Mentions: 3
Published: about 5 years ago

10.1186/s12931-019-1080-4

Chronic obstructive pulmonary disease upper airway microbiota alpha diversity is associated with exacerbation phenotype: a case-control observational study
Cited by: 29
Author(s): Alexa A. Pragman, Katherine A. Knutson, Trevor Gould, Richard E. Isaacson, Cavan Reilly, Christine Wendt
Software Mentions: 3
Published: over 7 years ago

10.7717/peerj.7304

Proximate grassland and shrub-encroached sites show dramatic restructuring of soil bacterial communities
Cited by: 7
Author(s): Xingjia Xiang, Sean M. Gibbons, Ling He, Haihua Shen, Haiyan Chu
Software Mentions: 3
Published: about 7 years ago

10.1002/ece3.4922

Partitioning the effects of regional, spatial, and local variables on beta diversity of salt marsh arthropods in Chile
Cited by: 12
Author(s): Cristina Coccia, José Miguel Fariña
Software Mentions: 3
Published: over 7 years ago

10.1186/s13068-016-0447-8

Consistent 1,3-propanediol production from glycerol in mixed culture fermentation over a wide range of pH
Cited by: 57
Author(s): Roman Moscoviz, Eric Trably, Nicolas Bernet
Software Mentions: 3
Published: over 10 years ago

10.1111/1751-7915.13693

Effects of growth‐promoting rhizobacteria on maize growth and rhizosphere microbial community under conservation tillage in Northeast China
Cited by: 38
Author(s): La Chen, Zhanhong Hao, Keke Li, Ye Sha, En Tao Wang, Xinhua Sui, Guohua Mi, Chang Fu Tian, Wenxin Chen
Software Mentions: 3
Published: almost 6 years ago

10.3390/genes11080904

The Gut Microbiota Profile in Children with Prader–Willi Syndrome
Cited by: 17
Author(s): Ye Peng, Qiming Tan, Shima Afhami, Edward C. Deehan, Suisha Liang, Marie G. Gantz, Lucila Triador, Karen Madsen, Jens Walter, Hein Min Tun, Andrea M. Haqq
Software Mentions: 3
Published: about 6 years ago

10.3389/fmicb.2021.618693

Chicken Manure and Mushroom Residues Affect Soil Bacterial Community Structure but Not the Bacterial Resistome When Applied at the Same Rate of Nitrogen for 3 Years
Cited by: 8
Author(s): Shuang Peng, Yiming Wang, Ruirui Chen, Xiangui Lin
Software Mentions: 3
Published: over 5 years ago

10.3390/ijerph14010037

Investigation of Indoor Air Quality in Houses of Macedonia
Cited by: 29
Author(s): Silvia Vilčeková, Ilija Zoran Apostoloski, Ľudmila Mečiarová, Eva Krídlová Burdová, Jozef Kiseľák
Software Mentions: 3
Published: over 9 years ago

10.1002/ece3.2826

Natal origin affects host preference and larval performance relationships in a tritrophic system
Cited by: 7
Author(s): Thomas A. Verschut, Laima Blažytė‐Čereškienė, Violeta Apšegaitė, Raimondas Mozūraitis, Peter A. Hambäck
Software Mentions: 3
Published: over 9 years ago

10.1038/s41598-020-80732-0

Application of wood ash leads to strong vertical gradients in soil pH changing prokaryotic community structure in forest top soil
Cited by: 11
Author(s): Toke Bang‐Andreasen, Mette Peltre, Lea Ellegaard-Jensen, Lars Hestbjerg Hansen, Morten Ingerslev, Regin Rønn, Carsten Suhr Jacobsen, Rasmus Kjøller
Software Mentions: 3
Published: over 5 years ago

10.3390/genes9120599

What Is the Giant Wall Gecko Having for Dinner? Conservation Genetics for Guiding Reserve Management in Cabo Verde
Cited by: 19
Author(s): Catarina J. Pinho, Bárbara Santos, Vanessa A. Mata, Mariana Seguro, Maria M. Romeiras, Ricardo J. Lopes, Raquel Vasconcelos
Software Mentions: 3
Published: almost 8 years ago

10.3390/genes9080407

Seasonal and Sexual Differences in the Microbiota of the Hoopoe Uropygial Secretion
Cited by: 10
Author(s): Sonia M. Rodríguez‐Ruano, Manuel Martín‐Vivaldi, Juan Manuel Peralta‐Sánchez, Ana B. García-Martín, Ángela Martínez-García, Juan José Soler, Eva Valdivia, Manuel Martínez‐Bueno
Software Mentions: 3
Published: about 8 years ago

10.1534/g3.119.400758

Prevalence and Implications of Contamination in Public Genomic Resources: A Case Study of 43 Reference Arthropod Assemblies
Cited by: 20
Author(s): Clémentine François, Faustine Durand, Emeric Figuet, Nicolas Galtier
Software Mentions: 3
Published: over 6 years ago

10.1002/ece3.1853

Timing and location of reproduction in African waterfowl: an overview of >100 years of nest records
Cited by: 7
Author(s): Graeme S. Cumming, Douglas M. Harebottle, Josphine Mundava, Nickson Erick Otieno, Stephanie Tyler
Software Mentions: 3
Published: over 10 years ago

10.1016/j.xpro.2020.100061

Protocol for Projecting Allele Frequency Change under Future Climate Change at Adaptive-Associated Loci
Cited by: 4
Author(s): Meghan Blumstein, Andrew D. Richardson, David J. Weston, Jin Zhang, Wellington Muchero, Robin Hopkins
Software Mentions: 3
Published: about 6 years ago

10.1002/ece3.7975

Phylogeographic analysis delimits three evolutionary significant units of least chipmunks in North America and identifies unique genetic diversity within the imperiled Peñasco population
Cited by: 3
Author(s): Emily E. Puckett, Sean M. Murphy, Gideon S. Bradburd
Software Mentions: 3
Published: about 5 years ago

10.1002/ece3.5017

The distribution of plant consumption traits across habitat types and the patterns of fruit availability suggest a mechanism of coexistence of two sympatric frugivorous mammals
Cited by: 7
Author(s): Luc Roscelin Dongmo Tédonzong, Jacob Willie, Nikki Tagg, Martin Ngankam Tchamba, Tsi Evaristus Angwafo, Ada Myriane Patipe Keuko, Jacques Keumo Kuenbou, Charles‐Albert Petre, Luc Lens
Software Mentions: 3
Published: over 7 years ago

10.3389/fmicb.2015.00970

French invasive Asian tiger mosquito populations harbor reduced bacterial microbiota and genetic diversity compared to Vietnamese autochthonous relatives
Cited by: 73
Author(s): Guillaume Minard, Florence‐Hélène Tran, Van Trân Van, Clément Goubert, Christophe Bellet, Grégory L’Ambert, Khanh Ly Huynh Kim, Trang Huynh Thi Thuy, Patrick Mavingui, Claire Valiente Moro
Software Mentions: 3
Published: almost 11 years ago

10.1002/ece3.5200

Strong patterns of intraspecific variation and local adaptation in Great Basin plants revealed through a review of 75 years of experiments
Cited by: 72
Author(s): Owen W. Baughman, Alison C. Agneray, Matthew L. Forister, Francis F. Kilkenny, Erin K. Espeland, Rob Fiegener, Matthew E. Horning, R. C. Johnson, Thomas N. Kaye, Jeff Ott, J. Bradley St. Clair, Elizabeth A. Leger
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-020-80633-2

Potential use of molecular and structural characterization of the gut bacterial community for postmortem interval estimation in Sprague Dawley rats
Cited by: 9
Author(s): Huan Li, Siruo Zhang, Ruina Liu, Yuan Lu, Di Wu, Eun Jin Yang, Yang Han, Shakir Ullah, Hafiz Muhammad Ishaq, Hailong Liu, Zhenyuan Wang, Jiru Xu
Software Mentions: 3
Published: over 5 years ago

10.1111/mec.15009

Genetic association with high‐resolution climate data reveals selection footprints in the genomes of barley landraces across the Iberian Peninsula
Cited by: 19
Author(s): Bruno Contreras‐Moreira, Roberto Serrano‐Notivoli, Naheif E. Mohammed, Carlos Pérez Cantalapiedra, Santiago Beguerı́a, Ana M. Casas, Ernesto Igartua
Software Mentions: 3
Published: over 7 years ago

10.1002/ece3.6200

Different processes shape the patterns of divergence in the nuclear and chloroplast genomes of a relict tree species in East Asia
Cited by: 3
Author(s): Xiangyu Tian, Junwei Ye, Tianming Wang, Lei Bao, Hongfang Wang
Software Mentions: 3
Published: over 6 years ago

10.1111/mec.15546

Potential adaptive divergence between subspecies and populations of snapdragon plants inferred from<i>Q</i>_ST–<i>F</i>_STcomparisons
Cited by: 9
Author(s): Sara Marin, Anaïs Gibert, Juliette Archambeau, Vincent Bonhomme, Mylène Lascoste, Benoît Pujol
Software Mentions: 3
Published: about 6 years ago

10.1002/ece3.6013

Organization of Squamata (Reptilia) assemblages in Mediterranean archipelagos
Cited by: 5
Author(s): Daniel Escoriza
Software Mentions: 3
Published: over 6 years ago

10.1186/s12983-017-0238-5

Differences in neurochemical profiles of two gadid species under ocean warming and acidification
Cited by: 18
Author(s): Matthias Schmidt, Heidrun Sigrid Windisch, Kai‐Uwe Ludwichowski, Sean Lando Levin Seegert, Hans‐Otto Pörtner, Daniela Storch, Christian Bock
Software Mentions: 3
Published: almost 9 years ago

10.1038/s41598-018-31823-6

Low-dose calcipotriol can elicit wound closure, anti-microbial, and anti-neoplastic effects in epidermolysis bullosa keratinocytes
Cited by: 23
Author(s): Christina Guttmann‐Gruber, B. Tockner, Cornelia Scharler, Clemens Hüttner, John E.A. Common, A.A.O. Tay, Simon Denil, Alfred Klausegger, Andrea Trost, Jenny Breitenbach, Peter Schnitzhofer, Peter Hofbauer, Martin Wolkersdorfer, Anja Diem, Martin Laimer, Dirk Strunk, Johann Bauer, Julia Reichelt, Roland Lang, Josefina Piñón Hofbauer
Software Mentions: 3
Published: about 8 years ago

10.1111/1462-2920.15232

Putative degraders of low‐density polyethylene‐derived compounds are ubiquitous members of plastic‐associated bacterial communities in the marine environment
Cited by: 14
Author(s): Maria Pinto, Paula Polania Zenner, Teresa M. Langer, Jesse Patrick Harrison, Meinhard Simon, Marta M. Varela, Gerhard J. Herndl
Software Mentions: 3
Published: almost 6 years ago

10.1111/1462-2920.14882

Structure and ecological function of the soil microbiome affecting plant–soil feedbacks in the presence of a soil‐borne pathogen
Cited by: 33
Author(s): S. Emilia Hannula, Hui Ma, Juan E. Pérez‐Jaramillo, Ana Pineda, T. Martijn Bezemer
Software Mentions: 3
Published: almost 7 years ago

10.1111/mec.12823

Fine‐scale spatial genetic structure of common and declining bumble bees across an agricultural landscape
Cited by: 43
Author(s): Stephanie Dreier, John W. Redhead, Ian A. Warren, Andrew F. G. Bourke, Matthew S. Heard, William Chester Jordan, Seirian Sumner, Jinliang Wang, Claire Carvell
Software Mentions: 3
Published: about 12 years ago

10.1111/1462-2920.15546

A novel methoxydotrophic metabolism discovered in the hyperthermophilic archaeon <i>Archaeoglobus fulgidus</i>
Cited by: 9
Author(s): Cornelia U. Welte, R.M. de Graaf, Paula Dalcin Martins, Robert S. Jansen, Mike S. M. Jetten, Julia M. Kurth
Software Mentions: 3
Published: over 5 years ago

10.1111/mec.14459

The effects of pastoral intensification on the feeding interactions of generalist predators in streams
Cited by: 6
Author(s): Caitlin E. Pearson, William Oliver Christian Symondson, Elizabeth L. Clare, Stephen James Ormerod, Esther Iparraguirre Bolaños, Ian P. Vaughan
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-018-29730-x

Types of tobacco consumption and the oral microbiome in the United Arab Emirates Healthy Future (UAEHFS) Pilot Study
Cited by: 39
Author(s): Yvonne Vallès, Claire K. Inman, Brandilyn A. Peters, Raghib Ali, Laila Abdel Wareth, Abdishakur Abdulle, Habiba Alsafar, Fatme Al Anouti, Ayesha S. Al Dhaheri, Divya Galani, Muna Abdalla Mohamed Haji, Aisha Al Hamiz, Ayesha Al Hosani, Mohammed Al-Houqani, Abdulla Al Junaibi, Marina Kazim, Tomas Kirchhoff, Wael Al Mahmeed, Fatma Al-Maskari, Abdullah Alnaeemi, Naima Oumeziane, Ravichandran Ramasamy, Ann Marie Schmidt, Michael Weitzman, Eiman Al Zaabi, Scott E. Sherman, Richard B. Hayes, Jiyoung Ahn
Software Mentions: 3
Published: about 8 years ago

10.3389/fmicb.2020.01598

Genetic Identity and Herbivory Drive the Invasion of a Common Aquatic Microbial Invader
Cited by: 1
Author(s): Sarah Bolius, Karoline Morling, Claudia Wiedner, Guntram Weithoff
Software Mentions: 3
Published: about 6 years ago

10.1126/sciadv.aba2578

Biodiversity intervention enhances immune regulation and health-associated commensal microbiota among daycare children
Cited by: 150
Author(s): Marja I. Roslund, Riikka Puhakka, Mira Grönroos, Noora Nurminen, Sami Oikarinen, Ahmad Mahfuz Gazali, Ondřej Cinek, Lenka Kramná, Nathan Siter, Heli K. Vari, Laura Soininen, Nan Hui, Juho Rajaniemi, Tuure Kinnunen, Olli H. Laitinen, Heikki Hyöty, Aki Sinkkonen
Software Mentions: 3
Published: almost 6 years ago

10.1186/s40793-021-00383-0

Changes in the root-associated bacteria of sorghum are driven by the combined effects of salt and sorghum development
Cited by: 17
Author(s): Yukun Gao, Jianghui Cui, Ge Ren, Wei Shilin, Yang Puyuan, Congpei Yin, Liang Hongkai, Chang Jin-hua
Software Mentions: 3
Published: about 5 years ago

10.1186/s40793-019-0347-1

The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples
Cited by: 58
Author(s): Hyun S. Gweon, Liam P. Shaw, Jeremy Swann, Nicola De Maio, Manal AbuOun, René Niehus, Alasdair T. M. Hubbard, Michael J. Bowes, Mark Bailey, Tim Peto, Sarah Hoosdally, A Sarah Walker, Robert Sebra, Derrick W. Crook, Muna F. Anjum, Daniel S. Read, Nicole Stoesser
Software Mentions: 3
Published: almost 7 years ago

10.3389/fvets.2021.692521

Oral Vaccination Reduces the Effects of Lawsonia intracellularis Challenge on the Swine Small and Large Intestine Microbiome
Cited by: 2
Author(s): Fernando Leite, Brittanie Winfield, Elizabeth A. Miller, Bonnie Weber, Timothy J. Johnson, Fred Sylvia, Erika Vasquez, Fábio A. Vannucci, Dana Beckler, Richard E. Isaacson
Software Mentions: 3
Published: about 5 years ago

10.1007/s11356-020-11437-0

250-year records of mercury and trace element deposition in two lakes from Cajas National Park, SW Ecuadorian Andes
Cited by: 7
Author(s): Tobias Schneider, Benjamin A. Musa Bandowe, Moritz Bigalke, Adrien Mestrot, Henrietta Hampel, Pablo V. Mosquera, Lea Fränkl, Giulia Wienhues, Hendrik Vogel, Wojciech Tylmann, Martín Grosjean
Software Mentions: 3
Published: almost 6 years ago

10.3389/fmicb.2020.570960

Gut Bacteriome Analysis of Anastrepha fraterculus sp. 1 During the Early Steps of Laboratory Colonization
Cited by: 5
Author(s): Julieta Salgueiro, Lida E. Pimper, Diego Fernando Segura, Fabián Horacio Milla, Romina Russo, Elias Asimakis, Panagiota Stathopoulou, Kostas Bourtzis, Jorge Luis Cladera, George Tsiamis, Silvia Beatriz Lanzavecchia
Software Mentions: 3
Published: almost 6 years ago

10.1002/etc.4317

Multiyear monitoring of bird communities in chlorpyrifos‐treated orchards in Spain and the United Kingdom: Spatial and temporal trends in species composition, abundance, and site fidelity
Cited by: 2
Author(s): Ralf Dittrich, Benedikt Giessing, María Martínez Benito, Anja Russ, Christian Wolf, Manousos Foudoulakis, Steve Norman
Software Mentions: 3
Published: over 7 years ago

10.1111/mec.14895

Biodiversity–function relationships in methanogenic communities
Cited by: 25
Author(s): Pawel Sierocinski, Florian Bayer, Gabriel Yvon‐Durocher, Melia Burdon, Tobias Großkopf, Mark Alston, David Swarbreck, P. J. Hobbs, Orkun S. Soyer, Angus Buckling
Software Mentions: 3
Published: almost 8 years ago

10.1038/s41598-020-79143-y

Microbial community composition in the rhizosphere of Larix decidua under different light regimes with additional focus on methane cycling microorganisms
Cited by: 17
Author(s): Nadine Praeg, Paul Illmer
Software Mentions: 3
Published: almost 6 years ago

10.7717/peerj.3539

Long-term monitoring reveals an avian species credit in secondary forest patches of Costa Rica
Cited by: 11
Author(s): Steven C. Latta, Nathan L. Brouwer, Alison Olivieri, Julie Girard-Woolley, Judy F. Richardson
Software Mentions: 3
Published: about 9 years ago

10.1038/s41598-020-79022-6

Maternal diet alters human milk oligosaccharide composition with implications for the milk metagenome
Cited by: 68
Author(s): Maxim D. Seferovic, Mahmoud A. Mohammad, Ryan M. Pace, Melinda A. Engevik, James Versalovic, Lars Bode, Morey W. Haymond, Kjersti M. Aagaard
Software Mentions: 3
Published: almost 6 years ago

10.1038/s41431-019-0557-4

The paternal and maternal genetic history of Vietnamese populations
Cited by: 20
Author(s): Enrico Macholdt, Liliana Arias, Nguyễn Thùy Dương, Nguyễn Đăng Tôn, Nguyễn Văn Phòng, Roland Schröder, Brigitte Pakendorf, Nông Văn Hải, Mark Stoneking
Software Mentions: 3
Published: almost 7 years ago

10.3389/fvets.2016.00011

Spatial and Temporal Changes in the Broiler Chicken Cecal and Fecal Microbiomes and Correlations of Bacterial Taxa with Cytokine Gene Expression
Cited by: 148
Author(s): Brian B. Oakley, Michael H. Kogut
Software Mentions: 3
Published: over 10 years ago

10.3389/fvets.2020.583715

Proximity Interactions in a Permanently Housed Dairy Herd: Network Structure, Consistency, and Individual Differences
Cited by: 15
Author(s): Kareemah Chopra, Holly R. Hodges, Z. E. Barker, Jorge A. Vázquez Diosdado, Jonathan Amory, Tom C. Cameron, Darren P. Croft, Nick Bell, Edward A. Codling
Software Mentions: 3
Published: almost 6 years ago

10.2807/1560-7917.ES.2019.24.6.1700774

Impact of rotavirus vaccination on rotavirus genotype distribution and diversity in England, September 2006 to August 2016
Cited by: 34
Author(s): Daniel Hungerford, David J. Allen, Sameena Nawaz, Sarah Collins, Shamez Ladhani, Roberto Vivancos, Miren Iturriza‐Gómara
Software Mentions: 3
Published: over 7 years ago

10.1155/2020/3291853

Transcriptomic Analysis of Fuzi Lizhong Decoction for the Treatment of Stomach Ulcers
Cited by: 2
Author(s): Xin Yang, Haijun Wang, Lei Xu
Software Mentions: 3
Published: over 6 years ago

10.1155/2016/6592363

Effect of Gender on the Knowledge of Medicinal Plants: Systematic Review and Meta-Analysis
Cited by: 60
Author(s): Wendy Marisol Torres­-Avilez, Patrícia Muniz de Medeiros, Ulysses Paulino Albuquerque
Software Mentions: 3
Published: over 10 years ago

10.1111/eva.13231

Leveraging genomics to understand threats to migratory birds
Cited by: 4
Author(s): Brenda Larison, Alec R. Lindsay, Christen M. Bossu, Michael D. Sorenson, Jonas Kaplan, David C. Evers, James D. Paruk, Jeffrey M. DaCosta, Thomas B. Smith, Kristen Ruegg
Software Mentions: 3
Published: over 5 years ago

10.1111/eva.12384

Genetic consequences of selection cutting on sugar maple ( Acer saccharum Marshall)
Cited by: 2
Author(s): Noémie Graignic, Francine Tremblay, Yves Bergeron
Software Mentions: 3
Published: over 10 years ago

10.3389/fpubh.2020.584953

Alterations in the Gut Microbiota of Zebrafish (Danio rerio) in Response to Water-Soluble Crude Oil Components and Its Mixture With a Chemical Dispersant
Cited by: 9
Author(s): Carlos Eduardo González-Penagos, Jesús Alejandro Zamora‐Briseño, Daniel Cerqueda‐García, Mónica Améndola-Pimenta, Juan Antonio Pérez-Vega, Emanuel Hernández-Nuñéz, Rossanna Rodríguez-Canul
Software Mentions: 3
Published: almost 6 years ago

10.3389/fpsyg.2016.00612

Relations between Spatial Distribution, Social Affiliations and Dominance Hierarchy in a Semi-Free Mandrill Population
Cited by: 12
Author(s): Alexandre Naud, Eloise Chailleux, Yan Kestens, Céline Bret, Dominic Desjardins, Odile Petit, Barthélémy Ngoubangoye, Cédric Sueur
Software Mentions: 3
Published: over 10 years ago

10.3389/fpls.2020.539584

Assessing the Effectiveness of in-situ Active Warming Combined With Open Top Chambers to Study Plant Responses to Climate Change
Cited by: 6
Author(s): Esther R. Frei, Luc Schnell, Yann Vitasse, Thomas Wohlgemuth, Barbara Moser
Software Mentions: 3
Published: almost 6 years ago

10.3389/fpls.2020.00735

The Leaf Economics Spectrum Constrains Phenotypic Plasticity Across a Light Gradient
Cited by: 11
Author(s): Xiaoping Chen, Jun Sun, Mantang Wang, Min Lyu, Karl J. Niklas, Sean T. Michaletz, Quanlin Zhong, Dongliang Cheng
Software Mentions: 3
Published: over 6 years ago

10.7717/peerj.10078

Hydrological and soil physiochemical variables determine the rhizospheric microbiota in subtropical lakeshore areas
Cited by: 5
Author(s): Xiaoke Zhang, Huili Wang, Zhifei Li, Jun Xie, Jiajia Ni
Software Mentions: 3
Published: almost 6 years ago

10.3390/metabo9050096

Inhibitory Effects of Green Tea Polyphenols on Microbial Metabolism of Aromatic Amino Acids in Humans Revealed by Metabolomic Analysis
Cited by: 24
Author(s): Yuyin Zhou, Ning-Ning Zhang, Andrea Y. Arikawa, Chi Chen
Software Mentions: 3
Published: over 7 years ago

10.3389/fphys.2020.00959

Effects of Six Sequential Charged Particle Beams on Behavioral and Cognitive Performance in B6D2F1 Female and Male Mice
Cited by: 21
Author(s): Jacob Raber, Andrea Fuentes Anaya, Eileen Ruth S. Torres, Joanne Lee, Sydney Weber Boutros, Dmytro Grygoryev, Austin Hammer, Kristin D. Kasschau, Thomas J. Sharpton, Mitchell S. Turker, Amy Kronenberg
Software Mentions: 3
Published: about 6 years ago

10.3389/fphys.2019.01635

Fermented Animal Source Protein as Substitution of Fishmeal on Intestinal Microbiota, Immune-Related Cytokines and Resistance to Vibrio mimicus in Freshwater Crayfish (Cherax cainii)
Cited by: 20
Author(s): Muhammad A.B. Siddik, Ravi Fotedar, Reaz Chaklader, Javed Foysal, Ashfaqun Nahar, Janet Howieson
Software Mentions: 3
Published: over 6 years ago

10.1111/eva.12877

Northern European <i>Salmo trutta</i> (L.) populations are genetically divergent across geographical regions and environmental gradients
Cited by: 23
Author(s): Dorte Bekkevold, Johann Höjesjö, Einar Eg Nielsen, David Aldvén, Thomas Damm Als, Marte Sodeland, Matthew Kent, Sigbjørn Lien, Michael Møller Hansen
Software Mentions: 3
Published: almost 7 years ago

10.3389/fphys.2021.645212

Exploration of Crucial Mediators for Carotid Atherosclerosis Pathogenesis Through Integration of Microbiome, Metabolome, and Transcriptome
Cited by: 9
Author(s): Lei Ji, Siliang Chen, Guangchao Gu, Jiawei Zhou, Wei Wang, Jinrui Ren, Jianhuang Wu, Dan Yang, Yuehong Zheng
Software Mentions: 3
Published: over 5 years ago

10.1111/eva.12658

Structural and compositional mismatch between captive and wild Atlantic salmon (<i>Salmo salar</i>) parrs’ gut microbiota highlights the relevance of integrating molecular ecology for management and conservation methods
Cited by: 30
Author(s): Camille Lavoie, Maxime Courcelle, Baptise Redivo, Nicolas Derôme
Software Mentions: 3
Published: about 8 years ago

10.3389/fphys.2021.702864

The Marine Gastropod Crepidula fornicata Remains Resilient to Ocean Acidification Across Two Life History Stages
Cited by: 4
Author(s): Christopher L Reyes-Giler, Brooke E. Benson, Matthew Levy, Xüqing Chen, Anthony Pires, Jan A. Pechenik, Sarah W. Davies
Software Mentions: 3
Published: about 5 years ago

10.1111/eva.12446

Managing cryptic biodiversity: Fine‐scale intralacustrine speciation along a benthic gradient in Alpine whitefish (<i>Coregonus</i> spp.)
Cited by: 32
Author(s): Alan G. Hudson, Baenz Lundsgaard-Hansen, Kay Lucek, Pascal Vonlanthen, Ole Seehausen
Software Mentions: 3
Published: over 9 years ago

10.1111/eva.12934

Prior adaptation of parasitoids improves biological control of symbiont‐protected pests
Cited by: 13
Author(s): Silvan Rossbacher, Christoph Vorburger
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2019.01548

Microbiome of the Black-Lipped Pearl Oyster Pinctada margaritifera, a Multi-Tissue Description With Functional Profiling
Cited by: 35
Author(s): Caroline Dubé, Chin‐Long Ky, Serge Planes
Software Mentions: 3
Published: about 7 years ago

10.3389/fmicb.2021.667043

Relative Weight of Organic Waste Origin on Compost and Digestate 16S rRNA Gene Bacterial Profilings and Related Functional Inferences
Cited by: 6
Author(s): Axel Aigle, Emilie Bourgeois, Laurence Marjolet, Sabine Houot, Dominique Patureau, Emmanuel Dœlsch, Benoît Cournoyer, Wessam Galia
Software Mentions: 3
Published: over 5 years ago

10.7717/peerj.4991

Seasonal dynamics alter taxonomical and functional microbial profiles in Pampa biome soils under natural grasslands
Cited by: 24
Author(s): Anthony Barboza, Victor Satler Pylro, Rodrigo Josemar Seminot Jacques, Paulo Ivonir Gubiani, Fernando Luíz Ferreira de Quadros, Júlio Kuhn da Trindade, Eric W. Triplett, Luiz Fernando Würdig Roesch
Software Mentions: 3
Published: over 8 years ago

10.1111/mec.13746

The ecology of an adaptive radiation of three-spined stickleback from North Uist, Scotland
Cited by: 31
Author(s): Isabel S. Magalhaes, Daniele D’Agostino, Paul A. Hohenlohe, Andrew D. C. MacColl
Software Mentions: 3
Published: about 10 years ago

10.1111/mec.12638

Bacterial profiling of <scp>W</scp> hite <scp>P</scp> lague Disease across corals and oceans indicates a conserved and distinct disease microbiome
Cited by: 74
Author(s): Cornelia Roder, Chatchanit Arif, Camille Daniels, Ernesto Weil, Christian R. Voolstra
Software Mentions: 3
Published: over 12 years ago

10.3389/fmicb.2017.02243

Low Microbial Diversity and Abnormal Microbial Succession Is Associated with Necrotizing Enterocolitis in Preterm Infants
Cited by: 60
Author(s): Priscila Caroline Thiago Dobbler, Renato S. Procianoy, Volker Mai, Rita de Cássia dos Santos Silveira, Andrea Corso, Bruna Schafer Rojas, Luiz Fernando Würdig Roesch
Software Mentions: 3
Published: almost 9 years ago

10.1038/s41598-018-26641-9

Exploring the diversity-stability paradigm using sponge microbial communities
Cited by: 36
Author(s): Bettina Glasl, Caitlin E. Smith, David G. Bourne, Nicole S. Webster
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-018-33750-y

Association of cervical microbial community with persistence, clearance and negativity of Human Papillomavirus in Korean women: a longitudinal study
Cited by: 30
Author(s): Selvaraj Arokiyaraj, Sang Soo Seo, Minji Kwon, Jae Kwan Lee, Mi Kyung Kim
Software Mentions: 3
Published: almost 8 years ago

10.1007/s10493-018-0314-3

Response of soil mites (Acari, Mesostigmata) to long-term Norway spruce plantation along a mountain stream
Cited by: 10
Author(s): Jacek Kamczyc, Maciej Skorupski, Marcin K. Dyderski, Anna Gazda, Mariusz Hachułka, Paweł Horodecki, Izabela Kałucka, Marek Malicki, Remigiusz Pielech, Michał Smoczyk, Sylwia Wierzcholska, Andrzej M. Jagodziński
Software Mentions: 3
Published: almost 8 years ago

10.3389/fped.2019.00394

Distinct Gut Microbiota Composition and Functional Category in Children With Cerebral Palsy and Epilepsy
Cited by: 36
Author(s): Chen Huang, Yinhu Li, Xin Feng, Dongfang Li, Xiuyun Liu, Qiuxing Ouyang, Wenkui Dai, Genfeng Wu, Qian Zhou, Peiqin Wang, Ke Zhou, Ximing Xu, Shuai Cheng Li, Yuanping Peng
Software Mentions: 3
Published: almost 7 years ago

10.1111/mec.14886

<scp>DNA</scp>metabarcoding unveils multiscale trophic variation in a widespread coastal opportunist
Cited by: 33
Author(s): Andjin Siegenthaler, Owen S. Wangensteen, Chiara Benvenuto, Joana Campos, Stefano Mariani
Software Mentions: 3
Published: almost 8 years ago

10.1007/s00792-017-0992-5

Changes in bacterial and archaeal communities during the concentration of brine at the graduation towers in Ciechocinek spa (Poland)
Cited by: 12
Author(s): Agnieszka Kalwasińska, Edyta Deja-Sikora, Aleksandra Burkowska‐But, Attila Szabó, Tamás Felföldi, Przemysław Kosobucki, Arkadiusz Krawiec, Maciej Walczak
Software Mentions: 3
Published: over 8 years ago

10.3389/fmicb.2018.02485

Flexible Symbiotic Associations of Symbiodinium With Five Typical Coral Species in Tropical and Subtropical Reef Regions of the Northern South China Sea
Cited by: 28
Author(s): Sanqiang Gong, Guangjun Chai, Yilin Xiao, Lijia Xu, Kefu Yu, Jinlong Li, Fang Liu, Hao Cheng, Fengli Zhang, Baolin Liao, Zhiyong Li
Software Mentions: 3
Published: almost 8 years ago

10.3389/fonc.2020.01029

Abnormal Food Timing Promotes Alcohol-Associated Dysbiosis and Colon Carcinogenesis Pathways
Cited by: 5
Author(s): Faraz Bishehsari, Shirin Moossavi, Phillip A. Engen, Xiaohan Liu, Yue Zhang
Software Mentions: 3
Published: about 6 years ago

10.12688/f1000research.16804.4

Do you cov me? Effect of coverage reduction on metagenome shotgun sequencing studies
Cited by: 10
Author(s): Federica Cattonaro, Alessandro Spadotto, Slobodanka Radović, Fabio Marroni
Software Mentions: 3
Published: over 6 years ago

10.3389/fnut.2021.702085

Changes in Intestinal Flora Structure and Metabolites Are Associated With Myocardial Fibrosis in Patients With Persistent Atrial Fibrillation
Cited by: 4
Author(s): Langsha Liu, Juan Su, Rui Li, Fanyan Luo
Software Mentions: 3
Published: about 5 years ago

10.12688/f1000research.13841.1

A comparison of computationally predicted functional metagenomes and microarray analysis for microbial P cycle genes in a unique basalt-soil forest
Cited by: 13
Author(s): Erick S. LeBrun, Sanghoon Kang
Software Mentions: 3
Published: over 8 years ago

10.3389/fnut.2021.680771

Effects of Probiotic Bacteria Lactobacillaceae on the Gut Microbiota in Children With Celiac Disease Autoimmunity: A Placebo-Controlled and Randomized Clinical Trial
Cited by: 8
Author(s): Elin Oscarsson, Åsa Håkansson, Carin Andrén Aronsson, Göran Molin, Daniel Agardh
Software Mentions: 3
Published: about 5 years ago

10.12688/f1000research.13996.2

Birds of primary and secondary forest and shrub habitats in the peat swamp of Berbak National Park, Sumatra
Cited by: 4
Author(s): Kevin Darras, Dedi Rahman, Waluyo Sugito, Yeni Mulyani, Dewi M. Prawiradilaga, Agus Rozali, Irfan Fitriawan, Teja Tscharntke
Software Mentions: 3
Published: over 8 years ago

10.3389/fmicb.2021.673128

Cross-Sectional Variations in Structure and Function of Coral Reef Microbiome With Local Anthropogenic Impacts on the Kenyan Coast of the Indian Ocean
Cited by: 1
Author(s): Sammy Wambua, Hadrien Gourlé, Etienne P. de Villiers, Oskar Karlsson Lindsjö, Nina Wambiji, Angus H. H. Macdonald, Erik Bongcam‐Rudloff, Santie de Villiers
Software Mentions: 3
Published: about 5 years ago

10.12688/f1000research.22035.2

Staphylococcus aureus nasal carriage and microbiome composition among medical students from Colombia: a cross-sectional study
Cited by: 8
Author(s): Niradiz Reyes, Oscar Montes, Stephanie Figueroa, Raj K. Tiwari, Christopher C. Sollecito, Rebecca Emmerich, Mykhaylo Usyk, Jan Geliebter, Robert D. Burk
Software Mentions: 3
Published: over 6 years ago

10.3389/fmicb.2021.729039

Deep Investigating the Changes of Gut Microbiome and Its Correlation With the Shifts of Host Serum Metabolome Around Parturition in Sows
Cited by: 7
Author(s): Hao Fu, Maozhang He, Jinyuan Wu, Yunyan Zhou, Shanlin Ke, Zhe Chen, Qin Liu, Min Liu, Hui Jiang, Lusheng Huang, Congying Chen
Software Mentions: 3
Published: about 5 years ago

10.1002/2211-5463.12694

Alterations in the human gut microbiome associated with <i>Helicobacter pylori</i> infection
Cited by: 29
Author(s): Daoming Wang, Yan Li, Zhong Huang, Qiuxia Ding, Yuxiang Lin, Shanmei Tang, Yang Zong, Qi Wang, Xiuqing Zhang, Huanming Yang, Rong Wang, Xiao Liu
Software Mentions: 3
Published: about 7 years ago

10.3389/fnut.2021.673316

Effect of Dietary Supplementation With Mixed Organic Acids on Immune Function, Antioxidative Characteristics, Digestive Enzymes Activity, and Intestinal Health in Broiler Chickens
Cited by: 17
Author(s): Jun Ma, Shad Mahfuz, Jian Wang
Software Mentions: 3
Published: about 5 years ago

10.3389/fmicb.2020.574146

Successional Change of the Fungal Microbiome Pine Seedling Roots Inoculated With Tricholoma matsutake
Cited by: 8
Author(s): Ki Hyeong Park, Seung‐Yoon Oh, Shinnam Yoo, Myung Soo Park, Jonathan J. Fong, Young Woon Lim
Software Mentions: 3
Published: almost 6 years ago

10.1111/1755-0998.13215

Evaluation of primer pairs for microbiome profiling from soils to humans within the One Health framework
Cited by: 52
Author(s): . Wasimuddin, Klaus Schlaeppi, Francesca Ronchi, Stephen L. Leib, Matthias Erb, Alban Ramette
Software Mentions: 3
Published: about 6 years ago

10.1093/femsec/fiaa163

Bacterial community assembly in Atlantic cod larvae (Gadus morhua): contributions of ecological processes and metacommunity structure
Cited by: 19
Author(s): Ragnhild Inderberg Vestrum, Kari J.K. Attramadal, Ôlav Vadstein, Madeleine S. Gundersen, Ingrid Bakke
Software Mentions: 3
Published: about 6 years ago

10.3389/fmicb.2019.01169

Metabarcoding Insights Into the Trophic Behavior and Identity of Intertidal Benthic Foraminifera
Cited by: 20
Author(s): Panagiota-Myrsini Chronopoulou, I. Salonen, Clare Bird, Gert‐Jan Reichart, Karoliina A. Koho
Software Mentions: 3
Published: over 7 years ago

10.3389/fnins.2020.00127

Case-Control Study of the Effects of Gut Microbiota Composition on Neurotransmitter Metabolic Pathways in Children With Attention Deficit Hyperactivity Disorder
Cited by: 56
Author(s): Lin Wan, Wen-Rong Ge, Shan Zhang, Yulin Sun, Bin Wang, Guang Yang
Software Mentions: 3
Published: over 6 years ago

10.1038/s41598-018-27325-0

Investigating Holocene human population history in North Asia using ancient mitogenomes
Cited by: 13
Author(s): Gülşah Merve Kılınç, Natalija Kashuba, Reyhan Yaka, Arev Pelin Sümer, Eren Yüncü, Dmitrij Shergin, Grigorij Leonidovich Ivanov, Dmitrii Kichigin, Kiunnei A. Pestereva, D.P. Volkov, Pavel V. Mandryka, Artur Kharinskii, А. Тишкин, Evgenij Ineshin, Evgeniy Kovychev, А. Д. Степанов, Aanatolij Alekseev, Svetlana Aleksandrovna Fedoseeva, Mehmet Somel, Mattias Jakobsson, Maja Krzewińska, Jan Storå, Anders Götherström
Software Mentions: 3
Published: over 8 years ago