cran: vegan | Projects | Ecosyste.ms: Papers

10.1038/s41598-018-28796-x

Differences between microhabitat and broad-scale patterns of niche evolution in terrestrial salamanders
Cited by: 47
Author(s): Gentile Francesco Ficetola, Enrico Lunghi, Claudia Canedoli, Emilio Padoa‐Schioppa, Roberta Pennati, Raoul Manenti
Software Mentions: 5
Published: about 8 years ago

10.1002/ece3.1203

Life history variation in <scp>B</scp> arents <scp>S</scp> ea fish: implications for sensitivity to fishing in a changing environment
Cited by: 35
Author(s): Magnus Aune Wiedmann, Raul Primicerio, Andrey V. Dolgov, Camilla A. Meyer Ottesen, Michaela Aschan
Software Mentions: 5
Published: about 12 years ago

10.1038/s41598-018-29320-x

Endocervical and vaginal microbiota in South African adolescents with asymptomatic Chlamydia trachomatis infection
Cited by: 35
Author(s): Christina Balle, Katie Lennard, Smritee Dabee, Shaun Barnabas, Shameem Z. Jaumdally, Melanie A. Gasper, Venessa Maseko, Zizipho Z. A. Mbulawa, Anna‐Lise Williamson, Linda‐Gail Bekker, David A. Lewis, Jo‐Ann S. Passmore, Heather B. Jaspan
Software Mentions: 5
Published: about 8 years ago

10.1111/gcb.15118

Climate change causes critical transitions and irreversible alterations of mountain forests
Cited by: 91
Author(s): Katharina Albrich, Werner Rammer, Rupert Seidl
Software Mentions: 5
Published: over 6 years ago

10.1017/S0031182021000640

Functional traits shape small mammal-helminth network: patterns and processes in species interactions
Cited by: 9
Author(s): Thiago dos Santos Cardoso, Cecilia S. Andreazzi, Arnaldo Maldonado, Rosana Gentile
Software Mentions: 5
Published: over 5 years ago

10.1038/s41598-018-29635-9

Trees represent community composition of other plant life-forms, but not their diversity, abundance or responses to fragmentation
Cited by: 15
Author(s): Bonifacio O. Pasion, Mareike Roeder, Jiajia Liu, Mika Yasuda, Richard T. Corlett, J. W. Ferry Slik
Software Mentions: 5
Published: about 8 years ago

10.1093/gigascience/giaa043

Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle
Cited by: 27
Author(s): Suk-Kyung Lim, Dong‐Jun Kim, Dong Chan Moon, Youna Cho, Mina Rho
Software Mentions: 5
Published: over 6 years ago

10.1038/s41598-018-30157-7

Multi-marker metabarcoding approach to study mesozooplankton at basin scale
Cited by: 72
Author(s): Sérgio Stefanni, D Stanković, Diego Borme, Alessandra de Olazabal, Tea Juretić, Alberto Pallavicini, Valentina Tirelli
Software Mentions: 5
Published: about 8 years ago

10.1093/femsec/fiy225

Highly competitive fungi manipulate bacterial communities in decomposing beech wood (Fagus sylvatica)
Cited by: 29
Author(s): Sarah Johnston, Jennifer Hiscox, Melanie Savoury, Lynne Boddy, Andrew J. Weightman
Software Mentions: 5
Published: almost 8 years ago

10.1093/gigascience/giy054

Benchmarking taxonomic assignments based on 16S rRNA gene profiling of the microbiota from commonly sampled environments
Cited by: 82
Author(s): Alexandre Almeida, Alex L. Mitchell, Aleksandra Tarkowska, Alex Bateman
Software Mentions: 5
Published: over 8 years ago

10.1038/s41598-018-31795-7

Macrofungal species distributions depend on habitat partitioning of topography, light, and vegetation in a temperate mountain forest
Cited by: 29
Author(s): Yun Chen, Zuoqiang Yuan, Bi Shi, Xueying Wang, Ye Yongzhong, Jens‐Christian Svenning
Software Mentions: 5
Published: about 8 years ago

10.1016/j.gpb.2018.04.008

Agricultural Risk Factors Influence Microbial Ecology in Honghu Lake
Cited by: 25
Author(s): Maozhen Han, Melissa Dsouza, Chunyu Zhou, Hongjun Li, Junqian Zhang, Chaoyun Chen, Qi Yao, Chunrong Zhong, Hao Zhou, Jack A. Gilbert, Zhi Wen, Kang Ning
Software Mentions: 5
Published: over 7 years ago

10.1002/ece3.3216

Influence of density‐dependent competition on foraging and migratory behavior of a subtropical colonial seabird
Cited by: 36
Author(s): Juliet S. Lamb, Yvan G. Satgé, Patrick G. R. Jodice
Software Mentions: 5
Published: about 9 years ago

10.1038/s41598-018-32917-x

Metabarcoding of marine environmental DNA based on mitochondrial and nuclear genes
Cited by: 42
Author(s): Babett Günther, Thomas Knebelsberger, Hermann Neumann, Silke Laakmann, Pedro Martínez Arbizu
Software Mentions: 5
Published: almost 8 years ago

10.1038/s41598-018-34619-w

A multiscale study of fungal endophyte communities of the foliar endosphere of native rubber trees in Eastern Amazon
Cited by: 28
Author(s): Aline B. M. Vaz, Paula Luize Camargos Fonseca, Fernanda Badotti, Demetra Skaltsas, Luiz Marcelo Ribeiro Tomé, Allefi C. Silva, Mayara C. Cunha, Marco A. Soares, Vera Lúcia dos Santos, Guilherme Oliveira, Priscilla Chaverri, Aristóteles Goés-Neto
Software Mentions: 5
Published: almost 8 years ago

10.1038/s41598-018-35159-z

Taxon-specific responses to different forestry treatments in a temperate forest
Cited by: 28
Author(s): Zoltán Elek, Bence Kovács, Réka Aszalós, Gergely Boros, Ferenc Samu, Flóra Tinya, Péter Ódor
Software Mentions: 5
Published: almost 8 years ago

10.1038/s41598-018-36709-1

Urogenital schistosomiasis is associated with signatures of microbiome dysbiosis in Nigerian adolescents
Cited by: 27
Author(s): Olumide Ajibola, Aislinn D. Rowan, Clement O. Ogedengbe, Mari B. Mshelia, Damien J. Cabral, Anthonius A. Eze, Stephen K. Obaro, Peter Belenky
Software Mentions: 5
Published: over 7 years ago

10.1007/s10096-020-04049-6

The vaginal microbiota in the course of bacterial vaginosis treatment
Cited by: 7
Author(s): Romy D. Zwittink, Ellen H A van den Munckhof, Maurine A. Leverstein–van Hall, Kim E. Boers, Anco Molijn, Cornelis W. Knetsch, Ed J. Kuijper
Software Mentions: 5
Published: almost 6 years ago

10.1038/s41598-019-40311-4

Plastics in sea surface waters around the Antarctic Peninsula
Cited by: 187
Author(s): Ana Luzia Lacerda, Lucas dos Santos Rodrigues, Erik van Sebille, Fábio Lameiro Rodrigues, Lourenço Ribeiro, Eduardo R. Secchi, Felipe Kessler, Maíra Carneiro Proietti
Software Mentions: 5
Published: over 7 years ago

10.1371/journal.pone.0208917

The hindgut microbiota of praying mantids is highly variable and includes both prey-associated and host-specific microbes
Cited by: 6
Author(s): Kara Tinker, Elizabeth A. Ottesen
Software Mentions: 5
Published: almost 8 years ago

10.1038/s41598-019-40910-1

Phosphorus source driving the soil microbial interactions and improving sugarcane development
Cited by: 25
Author(s): Thiago Gumière, Alain N. Rousseau, Diogo Paes da Costa, Alice de Souza Cassetari, Simone Raposo Cotta, Fernando Dini Andreote, Silvio José Gumière, Paulo Sérgio Pavinato
Software Mentions: 5
Published: over 7 years ago

10.1002/ece3.7952

Functional diversity of avian communities increases with canopy height: From individual behavior to continental‐scale patterns
Cited by: 5
Author(s): Vladimír Remeš, Eva Remešová, Nicholas R. Friedman, Beata Matysioková, Lucia Rubáčová
Software Mentions: 5
Published: about 5 years ago

10.1038/s41598-019-41452-2

Using Bacterial Transcriptomics to Investigate Targets of Host-Bacterial Interactions in Caenorhabditis elegans
Cited by: 21
Author(s): Jason P. Chan, Justin Wright, Hoi Tong Wong, Anastasia Ardasheva, Jamey T. Brumbaugh, Christopher J. McLimans, Regina Lamendella
Software Mentions: 5
Published: over 7 years ago

10.7717/peerj.1782

H2-saturation of high affinity H2-oxidizing bacteria alters the ecological niche of soil microorganisms unevenly among taxonomic groups
Cited by: 24
Author(s): Sarah Piché‐Choquette, Julien Tremblay, Susannah G. Tringe, Philippe Constant
Software Mentions: 5
Published: over 10 years ago

10.7554/eLife.54318

Rapamycin rejuvenates oral health in aging mice
Cited by: 52
Author(s): Jonathan Y. An, Kristopher A. Kerns, Andrew Ouellette, Laura Robinson, H Douglas Morris, Catherine C. Kaczorowski, So-Il Park, Title Mekvanich, Alex Kang, Jeffrey S. McLean, Timothy C. Cox, Matt Kaeberlein
Software Mentions: 5
Published: over 6 years ago

10.1038/s41598-019-43268-6

Structure and stability of the coral microbiome in space and time
Cited by: 60
Author(s): Courtney M. Dunphy, Tarik C. Gouhier, Nathaniel D. Chu, Steven V. Vollmer
Software Mentions: 5
Published: over 7 years ago

10.1016/j.wroa.2019.100033

Organic substrate diffusibility governs microbial community composition, nutrient removal performance and kinetics of granulation of aerobic granular sludge
Cited by: 74
Author(s): Manuel Layer, Aline Sondra Adler, Eva Reynaert, Antonio Hernández, Marco Pagni, Eberhard Morgenroth, Christof Holliger, Nicolas Derlon
Software Mentions: 5
Published: about 7 years ago

10.1038/s41598-019-44338-5

In-feed bacitracin methylene disalicylate modulates the turkey microbiota and metabolome in a dose-dependent manner
Cited by: 25
Author(s): Timothy A. Johnson, Matthew J. Sylte, Torey Looft
Software Mentions: 5
Published: over 7 years ago

10.1002/ece3.5228

Habitat fragmentation is associated with dietary shifts and microbiota variability in common vampire bats
Cited by: 51
Author(s): Melissa R. Ingala, Daniel J. Becker, Jacob Bak Holm, Karsten Kristiansen, Nancy B. Simmons
Software Mentions: 5
Published: over 7 years ago

10.1038/s41598-019-45368-9

Microbial communities in top- and subsoil of repacked soil columns respond differently to amendments but their diversity is negatively correlated with plant productivity
Cited by: 23
Author(s): Corinne Celestina, Jennifer L. Wood, James B. Manson, Xiaojuan Wang, P. W. G. Sale, Caixian Tang, Ashley E. Franks
Software Mentions: 5
Published: about 7 years ago

10.7717/peerj.6481

Mat thickness associated withDidymosphenia geminataandCymbellaspp. in the southern rivers of Chile
Cited by: 1
Author(s): Daniel Zamorano, Matías Peredo-Parada, Diana J. Lillo, Jorge Parodí, Carolina A. Díaz
Software Mentions: 5
Published: over 7 years ago

10.3390/microorganisms9071457

Indicative Marker Microbiome Structures Deduced from the Taxonomic Inventory of 67 Full-Scale Anaerobic Digesters of 49 Agricultural Biogas Plants
Cited by: 7
Author(s): Julia Hassa, Johanna Klang, Dirk Benndorf, Marcel Pohl, Benedikt Hülsemann, Torsten Mächtig, Mathias Effenberger, Alfred Pühler, Andreas Schlüter, Susanne Theuerl
Software Mentions: 5
Published: about 5 years ago

10.3389/fmed.2020.00101

Distinct Skin Microbiome and Skin Physiological Functions Between Bedridden Older Patients and Healthy People: A Single-Center Study in Japan
Cited by: 16
Author(s): Satoshi Nagase, Kazuhiro Ogai, Tamae Urai, Katsushi Shibata, Emi Matsubara, Kanae Mukai, Miki Matsue, Yosai Mori, Miku Aoki, Defa Arisandi, Junko Sugama, Shigefumi Okamoto
Software Mentions: 5
Published: over 6 years ago

10.1172/jci.insight.143058

Targeted DNA methylation profiling reveals epigenetic signatures in peanut allergy
Cited by: 26
Author(s): Xiaoying Zhou, Xiaorui Han, Shu‐Chen Lyu, Bryan Bunning, Laurie Kost, Iris Chang, Shu Cao, Vanitha Sampath, Kari Nadeau
Software Mentions: 5
Published: over 5 years ago

10.3389/fimmu.2018.02547

Clinical T Cell Receptor Repertoire Deep Sequencing and Analysis: An Application to Monitor Immune Reconstitution Following Cord Blood Transplantation
Cited by: 36
Author(s): Athina Soragia Gkazi, Ben Margetts, Teresa Attenborough, Lana Mhaldien, Joseph F. Standing, Theres Oakes, James Heather, John Booth, Marlène Pasquet, Robert Chiesa, Paul Veys, Nigel Klein, Benjamin M. Chain, Robin E. Callard, Stuart Adams
Software Mentions: 5
Published: almost 8 years ago

10.3389/fimmu.2021.722206

Gut Bacterial Characteristics of Patients With Type 2 Diabetes Mellitus and the Application Potential
Cited by: 35
Author(s): Yanyan Que, Man Cao, Jianquan He, Qiang Zhang, Qiongyun Chen, Changsheng Yan, Aiqiang Lin, Luxi Yang, Zezhen Wu, Dan Zhu, Fengwu Chen, Zhangran Chen, Chuanxing Xiao, Kaijian Hou, Bangzhou Zhang
Software Mentions: 5
Published: about 5 years ago

10.7717/peerj.7014

Soil bacterial and fungal communities of six bahiagrass cultivars
Cited by: 10
Author(s): Lukas Beule, Ko‐Hsuan Chen, Chih‐Ming Hsu, Cheryl L. Mackowiak, José C. B. Dubeux, Ann R. Blount, Hui‐Ling Liao
Software Mentions: 5
Published: over 7 years ago

10.1371/journal.pone.0256918

Using climatic variables alone overestimate climate change impacts on predicting distribution of an endemic species
Cited by: 8
Author(s): Somayeh Zangiabadi, Hassan Zare‐Maivan, LIuis Brotons, Hossein Mostafavi, Hojjatollah Ranjbar
Software Mentions: 5
Published: about 5 years ago

10.7717/peerj.8809

The impact of diel vertical migration on fatty acid patterns and allocation inDaphnia magna
Cited by: 4
Author(s): Meike Anika Hahn, Eric von Elert
Software Mentions: 5
Published: over 6 years ago

10.7717/peerj.9644

Microbiome dynamics in the tissue and mucus of acroporid corals differ in relation to host and environmental parameters
Cited by: 26
Author(s): Giulia M. Marchioro, Bettina Glasl, Aschwin H. Engelen, Ester Á. Serrão, David G. Bourne, Nicole S. Webster, Pedro R. Frade
Software Mentions: 5
Published: about 6 years ago

10.7717/peerj.9777

Generalized Linear Models outperform commonly used canonical analysis in estimating spatial structure of presence/absence data
Cited by: 4
Author(s): Lélis Antonio Carlos-Júnior, Joel Christopher Creed, Rob H. Marrs, Rob J. Lewis, Timothy P. Moulton, Rafael Feijó‐Lima, Matthew Spencer
Software Mentions: 5
Published: about 6 years ago

10.1002/ece3.6880

Structural implications of traditional agricultural landscapes on the functional diversity of birds near the Korean Demilitarized Zone
Cited by: 8
Author(s): Jae Hyun Kim, Shinyeong Park, Seung Ho Kim, Kyungsik Kang, Bruce Waldman, Myung Hwa Lee, Minhye Yu, Hyunyoung Yang, Hyun Yong Chung, Eun Ju Lee
Software Mentions: 5
Published: almost 6 years ago

10.1371/journal.pone.0221055

Faecalibacterium diversity in dairy cow milk
Cited by: 8
Author(s): Keith W. Savin, Jody L. Zawadzki, M.J. Auldist, Jianghui Wang, Doris Ram, Simone Rochfort, Benjamin G. Cocks
Software Mentions: 5
Published: about 7 years ago

10.1371/journal.pone.0238764

A comparative study of the gut microbiome in Egyptian patients with Type I and Type II diabetes
Cited by: 24
Author(s): Sahar Radwan, Darby Gilfillan, Bridget Eklund, Hend M. Radwan, Nagwan Galal El Menofy, Justin Lee, Marylee Kapuscinski, Zaid Abdo
Software Mentions: 5
Published: about 6 years ago

10.3390/microorganisms8010001

Fungal and Bacterial Communities Exhibit Consistent Responses to Reversal of Soil Acidification and Phosphorus Limitation over Time
Cited by: 9
Author(s): Sarah R. Carrino‐Kyker, Kaitlin P. Coyle, Laurel A. Kluber, David Burke
Software Mentions: 5
Published: over 6 years ago

10.7717/peerj.4606

Can phosphorus application and cover cropping alter arbuscular mycorrhizal fungal communities and soybean performance after a five-year phosphorus-unfertilized crop rotational system?
Cited by: 21
Author(s): Masao Higo, Ryohei Sato, Ayu Serizawa, Yuichi Takahashi, Kento Gunji, Yuya Tatewaki, Katsunori Isobe
Software Mentions: 5
Published: over 8 years ago

10.1371/journal.pone.0215497

Gut microbiota features associated with Clostridioides difficile colonization in puppies
Cited by: 15
Author(s): Alexander S. F. Berry, Brendan J Kelly, Denise Barnhart, Douglas G. Kelly, Daniel P. Beiting, Robert N. Baldassano, Laurel E. Redding
Software Mentions: 5
Published: about 7 years ago

10.1371/journal.pone.0156550

Faunal Communities Are Invariant to Fragmentation in Experimental Seagrass Landscapes
Cited by: 31
Author(s): Jonathan S. Lefcheck, Scott R. Marion, Alfonso V. Lombana, Robert J. Orth
Software Mentions: 5
Published: over 10 years ago

10.1186/s12917-020-02660-5

Subgingival microbiota of dogs with healthy gingiva or early periodontal disease from different geographical locations
Cited by: 12
Author(s): Corrin Wallis, Lisa Milella, Alison Colyer, Ciaran O’Flynn, Stephen Harris, Lucy J. Holcombe
Software Mentions: 5
Published: over 5 years ago

10.7717/peerj.3098

Metagenomic analysis exploring taxonomic and functional diversity of soil microbial communities in Chilean vineyards and surrounding native forests
Cited by: 107
Author(s): Luis E. Castañeda, Olga Barbosa
Software Mentions: 5
Published: over 9 years ago

10.7717/peerj.8317

Alteration of the gut microbiota associated with childhood obesity by 16S rRNA gene sequencing
Cited by: 65
Author(s): Xiaowei Chen, Haixiang Sun, Fei Jiang, Yan Shen, Xin Li, HU Xue-ju, Xiao-Min Shen, Pingmin Wei
Software Mentions: 5
Published: over 6 years ago

10.3390/ijms22115876

Oral Microbiome in Relation to Periodontitis Severity and Systemic Inflammation
Cited by: 31
Author(s): Adelina S. Plachokova, Sergio Andreu‐Sánchez, Marlies P. Noz, Jingyuan Fu, Niels P. Riksen
Software Mentions: 5
Published: over 5 years ago

10.1186/s42523-021-00104-5

Vertically transmitted microbiome protects eggs from fungal infection and egg failure
Cited by: 13
Author(s): Marie Bunker, Greg Elliott, H. Heyer-Gray, Michael R. Martin, A. Elizabeth Arnold, Stacey L. Weiss
Software Mentions: 5
Published: over 5 years ago

10.7717/peerj.11012

Changes in diversity and community assembly of jumping spiders (Araneae: Salticidae) after rainforest conversion to rubber and oil palm plantations
Cited by: 13
Author(s): André Junggebauer, Tamara R. Hartke, Daniel Ramos, Ina Schaefer, Damayanti Buchori, Purnama Hidayat, Stefan Scheu, Jochen Drescher
Software Mentions: 5
Published: over 5 years ago

10.3390/nu13093013

Composition of the Gut Microbiome Influences Production of Sulforaphane-Nitrile and Iberin-Nitrile from Glucosinolates in Broccoli Sprouts
Cited by: 11
Author(s): John A. Bouranis, Laura M. Beaver, Jaewoo Choi, Carmen P. Wong, Duo Jiang, Thomas J. Sharpton, Jan F. Stevens, Emily Ho
Software Mentions: 5
Published: about 5 years ago

10.1186/s10020-019-0114-1

An immunoevasive strategy through clinically-relevant pan-cancer genomic and transcriptomic alterations of JAK-STAT signaling components
Cited by: 14
Author(s): Wai Hoong Chang, Alvina G. Lai
Software Mentions: 5
Published: almost 7 years ago

10.3389/fcimb.2021.654074

Intestinal Microbiota Mediates High-Fructose and High-Fat Diets to Induce Chronic Intestinal Inflammation
Cited by: 30
Author(s): Rong Tan, Huiwei Dong, Zhengshan Chen, Min Jin, Jing Yin, Haibei Li, Danyang Shi, Yi-fan Shao, Huaran Wang, Tianjiao Chen, Dong Yang, Jùnwén Lǐ
Software Mentions: 5
Published: over 5 years ago

10.1186/s12890-016-0303-4

The bronchial epithelial cell bacterial microbiome and host response in patients infected with human immunodeficiency virus
Cited by: 6
Author(s): Marc A. Sze, Stella Xu, Janice M. Leung, Emily A. Vucic, Tawimas Shaipanich, Aida Moghadam, Marianne Harris, Silvia Guillemi, Sunita Sinha, Corey Nislow, Darra Murphy, Cameron Hague, Jonathon Leipsic, Stephen Lam, Wan L. Lam, Julio S. G. Montaner, Don D. Sin, S. F. Paul Man
Software Mentions: 5
Published: almost 10 years ago

10.3390/microorganisms8081122

Fecal Pollution Drives Antibiotic Resistance and Class 1 Integron Abundance in Aquatic Environments of the Bolivian Andes Impacted by Mining and Wastewater
Cited by: 18
Author(s): Jorge Agramont, Sergio Gutiérrez-Cortez, Enrique Joffré, Åsa Sjöling, Carla Calderon Toledo
Software Mentions: 5
Published: about 6 years ago

10.3389/fimmu.2015.00644

Dynamic Perturbations of the T-Cell Receptor Repertoire in Chronic HIV Infection and following Antiretroviral Therapy
Cited by: 59
Author(s): James Heather, Katharine Best, Theres Oakes, Eleanor R. Gray, Jennifer Roe, Niclas Thomas, Nir Friedman, Mahdad Noursadeghi, Benjamin M. Chain
Software Mentions: 5
Published: over 10 years ago

10.1111/1755-0998.13013

Evaluating next‐generation sequencing (NGS) methods for routine monitoring of wild bees: Metabarcoding, mitogenomics or NGS barcoding
Cited by: 18
Author(s): Morgan Gueuning, Dominik Ganser, Simon Blaser, Matthias Albrecht, Eva Knop, Christophe Praz, Juerg E. Frey
Software Mentions: 5
Published: over 7 years ago

10.1002/ece3.2683

Biodiversity in agricultural landscapes: The effect of apple cultivar on epiphyte diversity
Cited by: 4
Author(s): C. Robin Stevenson, Chantel Davies, Jennifer K. Rowntree
Software Mentions: 5
Published: over 9 years ago

10.1111/1755-0998.13008

Metabarcoding a diverse arthropod mock community
Cited by: 97
Author(s): Thomas Braukmann, Natalia V. Ivanova, Sean W. J. Prosser, Vasco Elbrecht, Dirk Steinke, Sujeevan Ratnasingham, Jeremy R. de Waard, Jayme E Sones, Evgeny Zakharov, Paul D. N. Hebert
Software Mentions: 5
Published: over 7 years ago

10.1186/s42523-021-00115-2

Environmentally enriched housing conditions affect pig welfare, immune system and gut microbiota in early life
Cited by: 21
Author(s): Caifang Wen, I.D.E. van Dixhoorn, Dirkjan Schokker, H. Woelders, Norbert Stockhofe-Zurwieden, Johanna M.J. Rebel, Hauke Smidt
Software Mentions: 5
Published: about 5 years ago

10.1111/jvim.15671

Effects of nebulized dexamethasone on the respiratory microbiota and mycobiota and relative equine herpesvirus‐1, 2, 4, 5 in an equine model of asthma
Cited by: 8
Author(s): Stephanie L. Bond, Matthew L. Workentine, Jana Hundt, James R. Gilkerson, Renaud Léguillette
Software Mentions: 5
Published: almost 7 years ago

10.1111/mec.15538

The balance between deterministic and stochastic processes in structuring lake bacterioplankton community over time
Cited by: 39
Author(s): Pablo S. Aguilar, Rubén Sommaruga
Software Mentions: 5
Published: about 6 years ago

10.1002/ece3.6133

Changes in tree community structure in defaunated forests are not driven only by dispersal limitation
Cited by: 6
Author(s): Kirstie Hazelwood, C. E. Timothy Paine, Fernando H. Cornejo Valverde, Elizabeth G. Pringle, Harald Beck, John Terborgh
Software Mentions: 5
Published: over 6 years ago

10.7717/peerj.1900

A comparison of species composition and community assemblage of secondary forests between the birch and pine-oak belts in the mid-altitude zone of the Qinling Mountains, China
Cited by: 13
Author(s): Zongzheng Chai, Dexiang Wang
Software Mentions: 5
Published: over 10 years ago

10.1111/mec.13481

Assessing vertebrate biodiversity in a kelp forest ecosystem using environmental <scp>DNA</scp>
Cited by: 318
Author(s): Jesse A. Port, James L. O’Donnell, Ofelia C. Romero‐Maraccini, Paul Leary, Steven Y. Litvin, Kerry J. Nickols, Kevan M. Yamahara, Ryan P. Kelly
Software Mentions: 5
Published: over 10 years ago

10.3390/nu12092610

Differences in Gut Microbiome Composition between Senior Orienteering Athletes and Community-Dwelling Older Adults
Cited by: 21
Author(s): Frida Fart, Sukithar Rajan, Rebecca Wall, Ignacio Rangel, John Peter Ganda-Mall, Lina Tingö, Robert Jan Brummer, Dirk Repsilber, Ida Schoultz, Carl Mårten Lindqvist
Software Mentions: 5
Published: about 6 years ago

10.3389/fcimb.2021.646348

Dysbiosis and Implication of the Gut Microbiota in Diabetic Retinopathy
Cited by: 62
Author(s): Yinhua Huang, Zhijie Wang, Hongjie Ma, Shangli Ji, Zhongping Chen, Zekai Cui, Jiansu Chen, Shibo Tang
Software Mentions: 5
Published: over 5 years ago

10.3389/fcimb.2021.579766

Preterm Birth Is Correlated With Increased Oral Originated Microbiome in the Gut
Cited by: 14
Author(s): Yin Chen, Jingrui Chen, Xiaoyi Wu, Ye-Ling Liu, He Qian, Ying Cao, Yie Huang, Sisun Liu
Software Mentions: 5
Published: over 5 years ago

10.3390/nu8100660

Effect of Bifidobacterium breve on the Intestinal Microbiota of Coeliac Children on a Gluten Free Diet: A Pilot Study
Cited by: 92
Author(s): Andrea Quagliariello, Irene Aloisio, Nicole Bozzi Cionci, Donata Luiselli, Giuseppe D’Auria, Llúcia Martínez-Priego, David Pérez-Villarroya, Tomaž Langerholc, Maša Primec, Dušanka Mičetić-Turk, Diana Di Gioia
Software Mentions: 5
Published: almost 10 years ago

10.7717/peerj.11230

Ectomycorrhizal fungal communities associated with Larix gemelinii Rupr. in the Great Khingan Mountains, China
Cited by: 2
Author(s): Yong-Long Wang, Ye Zhao, Ying Xu, MA Jian-jun, Busayo Joshua Babalola, Yida Fan
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0174891

Evaluating methods for estimating home ranges using GPS collars: A comparison using proboscis monkeys (Nasalis larvatus)
Cited by: 30
Author(s): Danica J. Stark, Ian P. Vaughan, Diana A. Ramírez Saldivar, Senthilvel K. S. S. Nathan, Benoît Goossens
Software Mentions: 5
Published: over 9 years ago

10.1111/j.1365-294X.2012.05756.x

Exploring local immunological adaptation of two stickleback ecotypes by experimental infection and transcriptome‐wide digital gene expression analysis
Cited by: 83
Author(s): Tobias L. Lenz, Christophe Eizaguirre, Björn Rotter, Martin Kalbe, Manfred Milinski
Software Mentions: 5
Published: about 14 years ago

10.1186/s12903-021-01439-w

Microbiological findings in early and late implant loss: an observational clinical case-controlled study
Cited by: 12
Author(s): Michael Korsch, Silke‐Mareike Marten, Dominic A. Stoll, Christopher Prechtl, Andreas Dötsch
Software Mentions: 5
Published: over 5 years ago

10.3389/fcimb.2021.633242

Effects of Smoking on Inflammatory Markers in a Healthy Population as Analyzed via the Gut Microbiota
Cited by: 13
Author(s): Yan Su, Zhonghui Ma, Mengfan Jiao, Youxiang Wang, Ang Li, Shuzhe Ding
Software Mentions: 5
Published: about 5 years ago

10.1186/s12866-021-02129-x

The infant gut resistome is associated with E. coli and early-life exposures
Cited by: 23
Author(s): Rebecca M. Lebeaux, Modupe Coker, Erika Dade, Thomas J. Palys, Hilary G. Morrison, Benjamin D. Ross, Emily Baker, Margaret R. Karagas, Juliette C. Madan, Anne G. Hoen
Software Mentions: 5
Published: about 5 years ago

10.1002/ece3.2454

Root exudate cocktails: the link between plant diversity and soil microorganisms?
Cited by: 154
Author(s): Katja Steinauer, Antonis Chatzinotas, Nico Eisenhauer
Software Mentions: 5
Published: almost 10 years ago

10.1111/mec.14581

Feather mites play a role in cleaning host feathers: New insights from <scp>DNA</scp> metabarcoding and microscopy
Cited by: 42
Author(s): Jorge Doña, H. C. Proctor, David Serrano, Kevin P. Johnson, Arnika Oddy van Oploo, José C. Huguet‐Tapia, Marina S. Ascunce, Roger Jovani
Software Mentions: 5
Published: over 8 years ago

10.3389/fcimb.2018.00301

Comparison of Fecal Collection Methods for Microbiome and Metabolomics Studies
Cited by: 105
Author(s): Zheng Wang, Christine P. Zolnik, Yunping Qiu, Mykhaylo Usyk, Tao Wang, Howard D. Strickler, Carmen R. Isasi, Robert C. Kaplan, Irwin J. Kurland, Qibin Qi, Robert D. Burk
Software Mentions: 5
Published: about 8 years ago

10.3390/nu12092570

Diet, Perceived Intestinal Well-Being and Compositions of Fecal Microbiota and Short Chain Fatty Acids in Oat-Using Subjects with Celiac Disease or Gluten Sensitivity
Cited by: 8
Author(s): Lotta Nylund, Salla Hakkola, Leo Lahti, Seppo Salminen, Marko Kalliomäki, Baoru Yang, Kaisa M. Linderborg
Software Mentions: 5
Published: about 6 years ago

10.1093/bioinformatics/btw311

PERMANOVA-S: association test for microbial community composition that accommodates confounders and multiple distances
Cited by: 94
Author(s): Zheng-Zheng Tang, Guanhua Chen, Alexander V. Alekseyenko
Software Mentions: 5
Published: over 10 years ago

10.1186/s13100-021-00236-0

Transcriptional activity of transposable elements along an elevational gradient in Arabidopsis arenosa
Cited by: 26
Author(s): Guillaume Wos, Rimjhim Roy Choudhury, Filip Kolář, Christian Parisod
Software Mentions: 5
Published: over 5 years ago

10.1186/s13100-019-0190-3

Stowaway miniature inverted repeat transposable elements are important agents driving recent genomic diversity in wild and cultivated carrot
Cited by: 6
Author(s): Alicja Macko-Podgórni, Katarzyna Stelmach, Kornelia Kwolek, Dariusz Grzebelus
Software Mentions: 5
Published: almost 7 years ago

10.3389/fbioe.2020.604838

Response of Microbial Community to Induced Failure of Anaerobic Digesters Through Overloading With Propionic Acid Followed by Process Recovery
Cited by: 15
Author(s): Azin Khafipour, Elsie M. Jordaan, Daniel Flores-Orozco, Ehsan Khafipour, David B. Levin, Richard Sparling
Software Mentions: 5
Published: almost 6 years ago

10.3389/fcimb.2021.637018

Identification of Microbiome Etiology Associated With Drug Resistance in Pleural Empyema
Cited by: 12
Author(s): Zhaoyan Chen, Hang Cheng, Zhao Cai, Qingjun Wei, Jinlong Li, Jing Liang, Wenshu Zhang, Zhijian Yu, Dongjing Liu, Lei Liu, Zhenqiang Zhang, Ke Wang, Liang Yang
Software Mentions: 5
Published: over 5 years ago

10.3390/microorganisms8081115

Distribution and Control of Bacterial Community Composition in Marian Cove Surface Waters, King George Island, Antarctica during the Summer of 2018
Cited by: 8
Author(s): Soyeon Kim, Ju-Hyoung Kim, Jae-Hyun Lim, Jong-Gil Jeong, Jang-Mu Heo, Il-Nam Kim
Software Mentions: 5
Published: about 6 years ago

10.3390/microorganisms9040854

Changes in Gut Microbiota Correlates with Response to Treatment with Probiotics in Patients with Atopic Dermatitis. A Post Hoc Analysis of a Clinical Trial
Cited by: 15
Author(s): Eric Climent, Juan F. Martínez-Blanch, Laura Llobregat, Beatriz Ruzafa-Costas, Miguel A Carrión-Gutiérrez, A. Ramírez-Boscá, David Prieto‐Merino, Salvador Genovés, Francisco M. Codoñer, Daniel Ramón, Empar Chenoll, Vicente Navarro-López
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0149852

How to Rank Journals
Cited by: 46
Author(s): Corey J. A. Bradshaw, Barry W. Brook
Software Mentions: 5
Published: over 10 years ago

10.3390/microorganisms8040604

Unraveling Heterogeneity of Coral Microbiome Assemblages in Tropical and Subtropical Corals in the South China Sea
Cited by: 11
Author(s): Sanqiang Gong, Xuejie Jin, Lijuan Ren, Yehui Tan, Xiaomin Xia
Software Mentions: 5
Published: over 6 years ago

10.3390/foods9101386

The Use of Less Conventional Meats or Meat with High pH Can Lead to the Growth of Undesirable Microorganisms during Natural Meat Fermentation
Cited by: 13
Author(s): Christina Charmpi, Emiel Niels Van Reckem, Nikoleta Sameli, David Van der Veken, Luc De Vuyst, Frédéric Leroy
Software Mentions: 5
Published: almost 6 years ago

10.1371/journal.pone.0216758

An integrated insight into the response of bacterial communities to anthropogenic contaminants in a river: A case study of the Wonderfonteinspruit catchment area, South Africa
Cited by: 20
Author(s): Karen Jordaan, A. Comeau, Damase P. Khasa, Cornelius Carlos Bezuidenhout
Software Mentions: 5
Published: over 7 years ago

10.1186/s12866-020-01884-7

Diversity and distribution of marine heterotrophic bacteria from a large culture collection
Cited by: 24
Author(s): Isabel Sanz-Sáez, Guillem Salazar, Pablo Sánchez, Elena Lara, Marta Royo-Llonch, Elisabet L. Sà, Teresa Lucena, María J. Pujalte, Dolors Vaqué, Carlos M. Duarte, Josep M. Gasol, Carlos Pedrós‐Alió, Olga Sánchez, Silvia G. Acinas
Software Mentions: 5
Published: about 6 years ago

10.3390/microorganisms9091803

Phytate and Microbial Suspension Amendments Increased Soybean Growth and Shifted Microbial Community Structure
Cited by: 5
Author(s): Boshir Ahmed, Jean-Baptiste Floc’h, Lahrach Zakaria, Mohamed Hijri
Software Mentions: 5
Published: about 5 years ago

10.3390/microorganisms9010064

Rock Surface Fungi in Deep Continental Biosphere—Exploration of Microbial Community Formation with Subsurface In Situ Biofilm Trap
Cited by: 8
Author(s): Maija Nuppunen-Puputti, Riikka Kietäväinen, Lotta Purkamo, Pauliina Rajala, Merja Itävaara, Ilmo Kukkonen, Malin Bomberg
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0223691

The bacterial community in potato is recruited from soil and partly inherited across generations
Cited by: 31
Author(s): Franziska Buchholz, Livio Antonielli, Tanja Kostić, Angela Sessitsch, Birgit Mitter
Software Mentions: 5
Published: almost 7 years ago

10.3390/foods9091247

Application of a High-Throughput Amplicon Sequencing Method to Chart the Bacterial Communities that Are Associated with European Fermented Meats from Different Origins
Cited by: 14
Author(s): Emiel Van Reckem, Christina Charmpi, David Van der Veken, Wim Borremans, Luc De Vuyst, Stefan Weckx, Frédéric Leroy
Software Mentions: 5
Published: about 6 years ago

10.1111/1462-2920.15484

Effect of salinity on cable bacteria species composition and diversity
Cited by: 19
Author(s): Ann‐Sofie Dam, Ian P. G. Marshall, Nils Risgaard‐Petersen, Laurine D. W. Burdorf, Ugo Marzocchi
Software Mentions: 5
Published: over 5 years ago

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Papers Mentioning vegan 6,903