cran: vegan | Projects | Ecosyste.ms: Papers

10.1038/s41598-020-76991-6

Salivary microbiome composition changes after bariatric surgery
Cited by: 11
Author(s): Mária Džunková, Róbert Lipták, Barbora Vlková, Roman Gardlík, M Cierny, Andrés Moya, Peter Celec
Software Mentions: 5
Published: almost 6 years ago

10.1111/eva.12684

Landscape genomics provides evidence of climate‐associated genetic variation in Mexican populations of Quercus rugosa
Cited by: 50
Author(s): Karina Martins, Paul F. Gugger, Jesús Llanderal‐Mendoza, Antonio González‐Rodríguez, Sorel Fitz‐Gibbon, Jianli Zhao, Hernando Rodríguez‐Correa, Ken Oyama, Victoria L. Sork
Software Mentions: 5
Published: about 8 years ago

10.1128/AEM.02969-19

Different Effects of Soil Fertilization on Bacterial Community Composition in the Penicillium canescens Hyphosphere and in Bulk Soil
Cited by: 12
Author(s): Yuan Zhang, Xiuli Hao, Adriana M. García-Lemos, Inês Nunes, Mette Haubjerg Nicolaisen, Ole Nybroe
Software Mentions: 5
Published: over 6 years ago

10.1038/s41598-020-76289-7

Plant functional traits are correlated with species persistence in the herb layer of old-growth beech forests
Cited by: 14
Author(s): Giandiego Campetella, Stefano Chelli, Enrico Simonetti, Claudia Damiani, Sándor Bartha, Camilla Wellstein, Daniele Giorgini, Nicola Puletti, Ladislav Mucina, Marco Cervellini, Roberto Canullo
Software Mentions: 5
Published: almost 6 years ago

10.3390/ani10112020

Vaginal Microbiota Is Stable throughout the Estrous Cycle in Arabian Mares
Cited by: 19
Author(s): Marta Barba, Rebeca Martínez-Boví, J.J. Quereda, M. L. Mocé, María Plaza-Dávila, E. Jiménez-Trigos, Ángel Gómez-Martín, Pedro González-Torres, Belén Carbonetto, E. García-Roselló
Software Mentions: 5
Published: almost 6 years ago

10.1007/s11356-019-06245-0

The effect of railways on bird diversity in farmland
Cited by: 9
Author(s): Joanna Kajzer‐Bonk, Piotr Skórka, Maciej Bonk, Magdalena Lenda, Elżbieta Rożej-Pabijan, Marta Wantuch, Dawid Moroń
Software Mentions: 5
Published: about 7 years ago

10.1371/journal.pone.0214833

Disparate effects of antibiotic-induced microbiome change and enhanced fitness in Daphnia magna
Cited by: 27
Author(s): Asa Motiei, Björn Brindefalk, Martin Ogonowski, Rehab El-Shehawy, Paulina Pastuszek, Karin Ek, Birgitta Liewenborg, Klas I. Udekwu, Elena Gorokhova
Software Mentions: 5
Published: over 6 years ago

10.1038/s41598-020-76978-3

Bio-fertilizer and rotten straw amendments alter the rhizosphere bacterial community and increase oat productivity in a saline–alkaline environment
Cited by: 20
Author(s): Peina Lu, Luke D. Bainard, Bin Ma, Jinghui Liu
Software Mentions: 5
Published: almost 6 years ago

10.1128/AEM.02992-18

Characterizing the Key Agents in a Disease-Suppressed Soil Managed by Reductive Soil Disinfestation
Cited by: 33
Author(s): Liang Liang Liu, Xinqi Huang, Jun Zhao, Jinbo Zhang, Zucong Cai
Software Mentions: 5
Published: over 7 years ago

10.1186/s40793-019-0342-6

The application of high-throughput sequencing technology to analysis of amoA phylogeny and environmental niche specialisation of terrestrial bacterial ammonia-oxidisers
Cited by: 46
Author(s): Axel Aigle, James I. Prosser, Cécile Gubry‐Rangin
Software Mentions: 5
Published: about 7 years ago

10.7717/peerj.8809

The impact of diel vertical migration on fatty acid patterns and allocation inDaphnia magna
Cited by: 4
Author(s): Meike Anika Hahn, Eric von Elert
Software Mentions: 5
Published: over 6 years ago

10.1186/s12866-021-02195-1

Characteristics and variation of fecal bacterial communities and functions in isolated systolic and diastolic hypertensive patients
Cited by: 8
Author(s): Pan Wang, Ying Dong, Kun Zuo, Chide Han, Jie Jiao, Xinchun Yang, Jing Li
Software Mentions: 5
Published: over 5 years ago

10.1038/s41598-020-72460-2

Dental black plaque: metagenomic characterization and comparative analysis with white-plaque
Cited by: 4
Author(s): Verónica Veses, Pedro González-Torres, Belén Carbonetto, MÂa del Mar Jovani-Sancho, Raquel González-Martínez, Isidoro Cortell-Ballester, Chirag C. Sheth
Software Mentions: 5
Published: almost 6 years ago

10.1186/s40168-016-0164-3

Effect of room temperature transport vials on DNA quality and phylogenetic composition of faecal microbiota of elderly adults and infants
Cited by: 52
Author(s): Colin Hill, Jillian R. Brown, Denise B. Lynch, Ian B. Jeffery, C. Anthony Ryan, R. Paul Ross, Catherine Stanton, Paul W. O’Toole
Software Mentions: 5
Published: over 10 years ago

10.1007/s10096-020-04049-6

The vaginal microbiota in the course of bacterial vaginosis treatment
Cited by: 7
Author(s): Romy D. Zwittink, Ellen H A van den Munckhof, Maurine A. Leverstein–van Hall, Kim E. Boers, Anco Molijn, Cornelis W. Knetsch, Ed J. Kuijper
Software Mentions: 5
Published: almost 6 years ago

10.1038/s41598-021-80990-6

Metagenomics analysis of bacteriophages and antimicrobial resistance from global urban sewage
Cited by: 24
Author(s): Josephine E. S. Strange, Pimlapas Leekitcharoenphon, Frederik Duus Møller, Frank Møller Aarestrup
Software Mentions: 5
Published: over 5 years ago

10.3389/fmicb.2019.02244

Microbial Community Shifts Associated With the Ongoing Stony Coral Tissue Loss Disease Outbreak on the Florida Reef Tract
Cited by: 115
Author(s): Julie Meyer, Jessy Castellanos-Gell, Greta S. Aeby, Claudia C. Häse, Blake Ushijima, Valerie J. Paul
Software Mentions: 5
Published: almost 7 years ago

10.7717/peerj.4606

Can phosphorus application and cover cropping alter arbuscular mycorrhizal fungal communities and soybean performance after a five-year phosphorus-unfertilized crop rotational system?
Cited by: 21
Author(s): Masao Higo, Ryohei Sato, Ayu Serizawa, Yuichi Takahashi, Kento Gunji, Yuya Tatewaki, Katsunori Isobe
Software Mentions: 5
Published: over 8 years ago

10.1186/s40168-017-0365-4

Morphological and genetic factors shape the microbiome of a seabird species (Oceanodroma leucorhoa) more than environmental and social factors
Cited by: 57
Author(s): Douglas S. Pearce, Brian A. Hoover, Sarah L. Jennings, Gabrielle A. Nevitt, Kathryn M. Docherty
Software Mentions: 5
Published: almost 9 years ago

10.1038/s41598-019-51432-1

Increasing oxygen deficiency changes rare and moderately abundant bacterial communities in coastal soft sediments
Cited by: 9
Author(s): Hanna Sinkko, Iina Hepolehto, Christina Lyra, Johanna M. Rinta-Kanto, Anna Villnäs, Joanna Norkko, Alf Norkko, Sari Timonen
Software Mentions: 5
Published: almost 7 years ago

10.1038/s41598-019-53975-9

Longitudinal study of the bacterial and fungal microbiota in the human sinuses reveals seasonal and annual changes in diversity
Cited by: 34
Author(s): Brett Wagner Mackenzie, Kevin Chang, Melissa Zoing, Ravi Jain, Michael Hoggard, Kristi Biswas, Richard Douglas, Michael W. Taylor
Software Mentions: 5
Published: almost 7 years ago

10.1186/s40168-019-0696-4

Antibiotic treatment in feedlot cattle: a longitudinal study of the effect of oxytetracycline and tulathromycin on the fecal and nasopharyngeal microbiota
Cited by: 57
Author(s): Devin B. Holman, Wenzhu Yang, Trevor W. Alexander
Software Mentions: 5
Published: over 7 years ago

10.1186/s40793-021-00382-1

Coupled DNA-labeling and sequencing approach enables the detection of viable-but-non-culturable Vibrio spp. in irrigation water sources in the Chesapeake Bay watershed
Cited by: 5
Author(s): Leena Malayil, Suhana Chattopadhyay, Emmanuel F. Mongodin, Amy R. Sapkota
Software Mentions: 5
Published: about 5 years ago

10.1111/j.1462-2920.2011.02494.x

Drivers of bacterial diversity dynamics in permeable carbonate and silicate coral reef sands from the Red Sea
Cited by: 46
Author(s): Sandra Schöttner, Barbara Pfitzner, Stefanie Grünke, Mohammed Rasheed, Christian Wild, Alban Ramette
Software Mentions: 5
Published: over 15 years ago

10.1111/1462-2920.15114

Heterogeneity of the rice microbial community of the Chinese centuries‐old Honghe Hani rice terraces system
Cited by: 8
Author(s): Pascal Alonso, Laurence Blondin, Pierre Gladieux, Frédéric Mahe, Hervé Sanguin, Romain Ferdinand, Denis Filloux, Érick Desmarais, Frédérique Cerqueira, Baocheng Jin, Huichuan Huang, Xiahong He, Jean-Benoît Morel, Darren P. Martin, Philippe Roumagnac, Christian Vernière
Software Mentions: 5
Published: about 6 years ago

10.1186/s40793-021-00377-y

Archaeal and bacterial communities assembly and co-occurrence networks in subtropical mangrove sediments under Spartina alterniflora invasion
Cited by: 45
Author(s): Weidong Chen, Donghui Wen
Software Mentions: 5
Published: over 5 years ago

10.1186/s40168-018-0430-7

Seasonal and algal diet-driven patterns of the digestive microbiota of the European abalone Haliotis tuberculata, a generalist marine herbivore
Cited by: 41
Author(s): Angélique Gobet, Laëtitia Mest, Morgan Perennou, Simon M. Dittami, Claire Caralp, Céline Coulombet, Sylvain Huchette, Sabine Roussel, Gurvan Michel, Catherine Leblanc
Software Mentions: 5
Published: over 8 years ago

10.1038/s41598-019-49956-7

Gut microbiome comparability of fresh-frozen versus stabilized-frozen samples from hospitalized patients using 16S rRNA gene and shotgun metagenomic sequencing
Cited by: 14
Author(s): Emma Elizabeth Ilett, Mette Jørgensen, Marc Noguera‐Julian, Gedske Daugaard, Daniel D. Murray, Marie Helleberg, Roger Paredes, Jens D Lundgren, Henrik Sengeløv, Cameron Ross MacPherson
Software Mentions: 5
Published: about 7 years ago

10.1186/s40168-020-00819-8

Multi-omics reveals that the rumen microbiome and its metabolome together with the host metabolome contribute to individualized dairy cow performance
Cited by: 139
Author(s): Mingyuan Xue, Hui-Zeng Sun, Xinke Wu, Jianxin Liu, Le Luo Guan
Software Mentions: 5
Published: over 6 years ago

10.1186/s40168-020-00995-7

Characterization of the human skin resistome and identification of two microbiota cutotypes
Cited by: 30
Author(s): Zhiming Li, Jingjing Xia, Liuyiqi Jiang, Yimei Tan, Yitai An, Xiaodong Zhu, Jie Ruan, Zhihua Chen, Hefu Zhen, Yanyun Ma, Zhuye Jie, Liang Xiao, Huanming Yang, Jian Wang, Karsten Kristiansen, Xun Xu, Li Jin, Chao Nie, Jean Krutmann, Xiao Liu, Jiucun Wang
Software Mentions: 5
Published: over 5 years ago

10.1128/AEM.00149-21

Hyperlocal Variation in Soil Iron and the Rhizosphere Bacterial Community Determines Dollar Spot Development in Amenity Turfgrass
Cited by: 1
Author(s): Ming-Yi Chou, Smita Shrestha, Renée A. Rioux, Paul L. Koch
Software Mentions: 5
Published: over 5 years ago

10.1186/s12866-021-02129-x

The infant gut resistome is associated with E. coli and early-life exposures
Cited by: 23
Author(s): Rebecca M. Lebeaux, Modupe Coker, Erika Dade, Thomas J. Palys, Hilary G. Morrison, Benjamin D. Ross, Emily Baker, Margaret R. Karagas, Juliette C. Madan, Anne G. Hoen
Software Mentions: 5
Published: about 5 years ago

10.1371/journal.pone.0146469

Large-Scale Spatio-Temporal Patterns of Mediterranean Cephalopod Diversity
Cited by: 11
Author(s): Stefanie Keller, Valerio Bartolino, Manuel Hidalgo, Isabella Bitetto, Loredana Casciaro, Danila Cuccu, Antonio Esteban, Carlos Martín García, Germana Garofalo, Marios Josephides, Angélique Jadaud, Eugenia Lefkaditou, Porzia Maiorano, Chiara Manfredi, Bojan Marčeta, Enric Massutí, Reno Micallef, Panagiota Peristeraki, Giulio Rélini, Paolo Sartor, María Teresa Spedicato, George Tserpes, Antoni Quetglas
Software Mentions: 5
Published: over 10 years ago

10.1186/s40793-021-00381-2

Soil, senescence and exudate utilisation: characterisation of the Paragon var. spring bread wheat root microbiome
Cited by: 17
Author(s): Samuel M. M. Prudence, Jake T. Newitt, Sarah F. Worsley, Michael C. Macey, J. Colin Murrell, Laura E. Lehtovirta-Morley, Matthew I. Hutchings
Software Mentions: 5
Published: about 5 years ago

10.1371/journal.pone.0228539

Intraspecific perspective of phenotypic coordination of functional traits in Scots pine
Cited by: 13
Author(s): Bárbara Carvalho, Cristina C. Bastías, Adrián Escudero, Fernando Valladares, Raquel Benavides
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pone.0194131

Instar- and host-associated differentiation of bacterial communities in the Mediterranean fruit fly Ceratitis capitata
Cited by: 55
Author(s): Antonino Malacrinò, Orlando Campolo, Raúl F. Medina, Vincenzo Palmeri
Software Mentions: 5
Published: over 8 years ago

10.1002/ece3.7176

Predator community and resource use jointly modulate the inducible defense response in body height of crucian carp
Cited by: 3
Author(s): Ilaria de Meo, Kjartan Østbye, Kimmo K. Kahilainen, Brian Hayden, Christian Holte Heia Fagertun, Antonio B.S. Poléo
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0222737

Annual replication is essential in evaluating the response of the soil microbiome to the genetic modification of maize in different biogeographical regions
Cited by: 6
Author(s): Márton Szoboszlay, Astrid Näther, Ewen Mullins, Christoph C. Tebbe
Software Mentions: 5
Published: over 6 years ago

10.1038/s41598-019-46923-0

The Predominant Oral Microbiota Is Acquired Early in an Organized Pattern
Cited by: 63
Author(s): Rosalyn Sulyanto, Zachary A. Thompson, Clifford J. Beall, Eugene J. Leys, Ann L. Griffen
Software Mentions: 5
Published: about 7 years ago

10.1038/s41598-019-46024-y

Direct and indirect effects of urban gardening on aboveground and belowground diversity influencing soil multifunctionality
Cited by: 24
Author(s): Simon Tresch, David Frey, Renée‐Claire Le Bayon, Paul Mäder, Bernhard Stehle, Andreas Fließbach, Marco Moretti
Software Mentions: 5
Published: about 7 years ago

10.1002/ece3.917

Grassland invaders and their mycorrhizal symbionts: a study across climate and invasion gradients
Cited by: 21
Author(s): Rebecca A. Bunn, Ylva Lekberg, Christopher Gallagher, Søren Rosendahl, Philip W. Ramsey
Software Mentions: 5
Published: over 12 years ago

10.1002/ece3.5789

Comparative analysis of microbiota along the length of the gastrointestinal tract of two tree squirrel species ( Sciurus aberti and S. niger ) living in sympatry
Cited by: 5
Author(s): Andrew Joseph Reed, Jon C. Pigage, Helen K. Pigage, Cody Glickman, Jeremy M. Bono
Software Mentions: 5
Published: almost 7 years ago

10.1038/s41598-019-45368-9

Microbial communities in top- and subsoil of repacked soil columns respond differently to amendments but their diversity is negatively correlated with plant productivity
Cited by: 23
Author(s): Corinne Celestina, Jennifer L. Wood, James B. Manson, Xiaojuan Wang, P. W. G. Sale, Caixian Tang, Ashley E. Franks
Software Mentions: 5
Published: about 7 years ago

10.1002/ece3.6720

Drivers of a habitat shift by critically endangered Siberian cranes: Evidence from long‐term data
Cited by: 11
Author(s): Jinjin Hou, Yifei Liu, James D. Fraser, Lei Li, Bin Zhao, Zhichun Lan, Jian Jin, Guanhua Liu, Dai Nagamatsu, Wenjuan Wang
Software Mentions: 5
Published: about 6 years ago

10.1371/journal.pone.0243395

The applicability of forensic time since death estimation methods for buried bodies in advanced decomposition stages
Cited by: 21
Author(s): Stefan Pittner, Valentina Bugelli, M. Eric Benbow, Bianca Ehrenfellner, Angela Zissler, Carlo Pietro Campobasso, Roelof‐Jan Oostra, Maurice C. G. Aalders, Richard Zehner, Lena Lutz, Fabio Monticelli, Christian Staufer, Katharina Helm, Vilma Pinchi, Joseph P. Receveur, Janine Geißenberger, Peter Steinbacher, Jens Amendt
Software Mentions: 5
Published: almost 6 years ago

10.1038/s41598-019-43268-6

Structure and stability of the coral microbiome in space and time
Cited by: 60
Author(s): Courtney M. Dunphy, Tarik C. Gouhier, Nathaniel D. Chu, Steven V. Vollmer
Software Mentions: 5
Published: over 7 years ago

10.1038/s41598-019-44338-5

In-feed bacitracin methylene disalicylate modulates the turkey microbiota and metabolome in a dose-dependent manner
Cited by: 25
Author(s): Timothy A. Johnson, Matthew J. Sylte, Torey Looft
Software Mentions: 5
Published: over 7 years ago

10.1002/ece3.5795

Climatic and vegetational drivers of insect beta diversity at the continental scale
Cited by: 10
Author(s): Douglas Chesters, Philip Beckschäfer, Michael C. Orr, Sarah J. Adamowicz, Kwok Pan Chun, Chao Zhu
Software Mentions: 5
Published: almost 7 years ago

10.1002/ece3.7434

Tree diversity and functional leaf traits drive herbivore‐associated microbiomes in subtropical China
Cited by: 1
Author(s): Yang Li, Douglas Chesters, Ming‐Qiang Wang, Tesfaye Wubet, Andreas Schuldt, Perttu Anttonen, Pengfei Guo, Jing‐Ting Chen, Qianxiong Zhou, Nai‐Li Zhang, Keping Ma, Helge Bruelheide, Chunsheng Wu, Chao‐Dong Zhu
Software Mentions: 5
Published: over 5 years ago

10.1128/AEM.02646-18

Changes in the Active, Dead, and Dormant Microbial Community Structure across a Pleistocene Permafrost Chronosequence
Cited by: 58
Author(s): Alexander Burkert, Thomas A. Douglas, Mark P. Waldrop, Rachel Mackelprang
Software Mentions: 5
Published: over 7 years ago

10.1038/srep40170

Simultaneous abrupt shifts in hydrology and fish assemblage structure in a floodplain lake in the central Amazon
Cited by: 66
Author(s): Cristhiana Paula Röpke, Sidinéia Amadio, Jansen Zuanon, Efrem Jorge Gondim Ferreira, Cláudia Pereira de Deus, Tiago Pires, Kirk O. Winemiller
Software Mentions: 5
Published: over 9 years ago

10.1002/ece3.7952

Functional diversity of avian communities increases with canopy height: From individual behavior to continental‐scale patterns
Cited by: 5
Author(s): Vladimír Remeš, Eva Remešová, Nicholas R. Friedman, Beata Matysioková, Lucia Rubáčová
Software Mentions: 5
Published: about 5 years ago

10.1002/mbo3.1231

Marine biofilms on different fouling control coating types reveal differences in microbial community composition and abundance
Cited by: 16
Author(s): Maria Papadatou, Samuel Robson, Sergey Dobretsov, Joy E. M. Watts, Jennifer Longyear, Maria Salta
Software Mentions: 5
Published: about 5 years ago

10.1038/srep37473

Hydrocarbon degraders establish at the costs of microbial richness, abundance and keystone taxa after crude oil contamination in permafrost environments
Cited by: 55
Author(s): Shuai Yang, Wen Xi, Yulan Shi, Susanne Liebner, Huijun Jin, Amedea Perfumo
Software Mentions: 5
Published: almost 10 years ago

10.1002/ece3.1203

Life history variation in <scp>B</scp> arents <scp>S</scp> ea fish: implications for sensitivity to fishing in a changing environment
Cited by: 35
Author(s): Magnus Aune Wiedmann, Raul Primicerio, Andrey V. Dolgov, Camilla A. Meyer Ottesen, Michaela Aschan
Software Mentions: 5
Published: about 12 years ago

10.1002/mbo3.1133

A low‐cost pipeline for soil microbiome profiling
Cited by: 5
Author(s): Anita Bollmann‐Giolai, Michael Giolai, Darren Heavens, Iain C. Macaulay, Jacob G. Malone, Matt Clark
Software Mentions: 5
Published: almost 6 years ago

10.1002/mbo3.681

Do composition and diversity of bacterial communities and abiotic conditions of spring water reflect characteristics of groundwater ecosystems exposed to different agricultural activities?
Cited by: 4
Author(s): Karsten Karczewski, Patricia Göbel, Elisabeth I. Meyer
Software Mentions: 5
Published: about 8 years ago

10.1038/srep43465

Parasitism perturbs the mucosal microbiome of Atlantic Salmon
Cited by: 86
Author(s): Martin S. Llewellyn, S. Leadbeater, Carlos García, François‐Étienne Sylvain, María Custodio, Keng Pee Ang, Frank C. Powell, Gary R. Carvalho, Simon Creer, J. M. Elliot, Nicolas Derôme
Software Mentions: 5
Published: over 9 years ago

10.1371/journal.pone.0145099

Variability of Symbiodinium Communities in Waters, Sediments, and Corals of Thermally Distinct Reef Pools in American Samoa
Cited by: 54
Author(s): Ross Cunning, Denise M. Yost, Marisa L. Guarinello, Hollie M. Putnam, Ruth D. Gates
Software Mentions: 5
Published: over 10 years ago

10.3389/fmicb.2019.01486

Soil Salinity and pH Drive Soil Bacterial Community Composition and Diversity Along a Lateritic Slope in the Avon River Critical Zone Observatory, Western Australia
Cited by: 39
Author(s): Flora Jane Mary O'Brien, Maya Almaraz, Melissa A. Foster, A. F. Hill, David P. Huber, Elizabeth King, Harry Langford, Mary-Anne Lowe, Bede S. Mickan, Valerie S. Miller, Oliver Moore, Falko Mathes, Deirdre Gleeson, Matthias Leopold
Software Mentions: 5
Published: about 7 years ago

10.1002/ece3.7099

Divergent lineages in a semi‐arid mallee species, Eucalyptus behriana, correspond to a major geographic break in southeastern Australia
Cited by: 7
Author(s): Patrick S. Fahey, Rachael M. Fowler, Todd G. B. McLay, Frank Udovicic, David J. Cantrill, Michael J. Bayly
Software Mentions: 5
Published: almost 6 years ago

10.1099/mgen.0.000190

Genetic analysis of invasive Escherichia coli in Scotland reveals determinants of healthcare-associated versus community-acquired infections
Cited by: 32
Author(s): Cosmika Goswami, Stephen Fox, Matthew T. G. Holden, Martin Connor, Alistair Leanord, Thomas J. Evans
Software Mentions: 5
Published: over 8 years ago

10.1186/s40168-016-0189-7

Cardiorespiratory fitness as a predictor of intestinal microbial diversity and distinct metagenomic functions
Cited by: 274
Author(s): Mehrbod Estaki, Jason Pither, Peter Baumeister, Jonathan P. Little, S K Gill, Sanjoy Ghosh, Ahmadi-Vand Zahra, Katelyn Marsden, Deanna L. Gibson
Software Mentions: 5
Published: about 10 years ago

10.1111/jbi.13746

Drivers of bromeliad leaf and floral bract variation across a latitudinal gradient in the Atlantic Forest
Cited by: 4
Author(s): Beatriz Neves, Camila Martini Zanella, Igor Musauer Kessous, Fernando Pérez Uribbe, Fabiano Salgueiro, Fernanda Bered, Alexandre Antonelli, Christine D. Bacon, Andrea Costa
Software Mentions: 5
Published: almost 7 years ago

10.1002/ece3.2328

Swimming with the giant: coexistence patterns of a new redfin minnow Pseudobarbus skeltoni from a global biodiversity hot spot
Cited by: 8
Author(s): Wilbert T. Kadye, Albert Chakona, Martine S. Jordaan
Software Mentions: 5
Published: about 10 years ago

10.1371/journal.pone.0208272

Quality and quantity of leaf litter: Both are important for feeding preferences and growth of an aquatic shredder
Cited by: 16
Author(s): Rebeca Arias-Real, M. Menéndez, Meritxell Abril, Francesc Oliva, Isabel Muñoz
Software Mentions: 5
Published: almost 8 years ago

10.1371/journal.pntd.0007361

Host species and site of collection shape the microbiota of Rift Valley fever vectors in Kenya
Cited by: 3
Author(s): David P. Tchouassi, Ephantus J. Muturi, Samwel O. Arum, Chang‐Hyun Kim, Christopher J. Fields, Baldwyn Torto
Software Mentions: 5
Published: over 7 years ago

10.1186/s40104-020-00542-2

Linkage between the intestinal microbiota and residual feed intake in broiler chickens
Cited by: 26
Author(s): Jing Liu, Sydney Stewart, Kelsy Robinson, Qing Yang, Wentao Lyu, Melanie A. Whitmore, Guolong Zhang
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0151650

Conservation of Pollinators in Traditional Agricultural Landscapes – New Challenges in Transylvania (Romania) Posed by EU Accession and Recommendations for Future Research
Cited by: 32
Author(s): Anikó Kovács‐Hostyánszki, Rita Földesi, Edina Mózes, Ádám Szirák, Joern Fischer, Jan Hanspach, András Báldi
Software Mentions: 5
Published: over 10 years ago

10.1371/journal.pgen.1002355

Signatures of Environmental Genetic Adaptation Pinpoint Pathogens as the Main Selective Pressure through Human Evolution
Cited by: 460
Author(s): Matteo Fumagalli, Manuela Sironi, Diego Forni, Anna Ferrer-Admettla, Linda Pattini, Rasmus Nielsen
Software Mentions: 5
Published: almost 15 years ago

10.1264/jsme2.ME20153

Inoculation of Mimosa Pudica with Paraburkholderia phymatum Results in Changes to the Rhizoplane Microbial Community Structure
Cited by: 5
Author(s): Shashini U. Welmillage, Qian Zhang, Virinchipuram S. Sreevidya, Michael J. Sadowsky, Prasad Gyaneshwar
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pcbi.1007099

Transcriptome-guided parsimonious flux analysis improves predictions with metabolic networks in complex environments
Cited by: 46
Author(s): Matthew L. Jenior, Thomas J. Moutinho, Bonnie V. Dougherty, Jason A. Papin
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pbio.1002324

Five Years of Experimental Warming Increases the Biodiversity and Productivity of Phytoplankton
Cited by: 101
Author(s): D. Yvon, Andrew P. Allen, María Cellamare, Matteo Dossena, Kevin J. Gaston, Maria Leitão, José M. Montoya, Daniel C. Reuman, Guy Woodward, Mark Trimmer
Software Mentions: 5
Published: over 10 years ago

10.1002/ece3.6196

Competition with insectivorous ants as a contributor to low songbird diversity at low elevations in the eastern Himalaya
Cited by: 12
Author(s): K. Supriya, Trevor D. Price, Corrie S. Moreau
Software Mentions: 5
Published: over 6 years ago

10.1172/jci.insight.138772

IL-32γ potentiates tumor immunity in melanoma
Cited by: 19
Author(s): Thomas Gruber, Mirela Kremenovic, Hassan Sadozai, Nives Rombini, Lukas Baeriswyl, Fabienne Maibach, Robert L. Modlin, Michel Gilliet, Diego von Werdt, Robert E. Hunger, S. Morteza Seyed Jafari, Giulia Parisi, Gabriel Abril-Rodríguez, Antoni Ribas, Mirjam Schenk
Software Mentions: 5
Published: almost 6 years ago

10.3390/insects12030219

Ant Diversity and Community Composition in Alpine Tree Line Ecotones
Cited by: 4
Author(s): Elia Guariento, Konrad Fiedler
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0198452

Large-scale patterns of benthic marine communities in the Brazilian Province
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Author(s): Anaide W. Aued, Franz Smith, Juan P. Quimbayo, Davi V. Cândido, Guilherme O. Longo, Carlos E. L. Ferreira, Jon D. Witman, Sergio R. Floeter, Bárbara Segal
Software Mentions: 5
Published: over 8 years ago

10.1186/s12864-020-07180-y

Transcriptome analysis reveals mechanism of early ripening in Kyoho grape with hydrogen peroxide treatment
Cited by: 22
Author(s): Da‐Long Guo, Zhenguang Wang, Mao-Song Pei, Lili Guo, Yi‐He Yu
Software Mentions: 5
Published: almost 6 years ago

10.1111/1751-7915.12348

Towards the development of multifunctional molecular indicators combining soil biogeochemical and microbiological variables to predict the ecological integrity of silvicultural practices
Cited by: 2
Author(s): Vincent Peck, Liliana Quiza, Jean‐Philippe Buffet, Mondher Khdhiri, Audrey‐Anne Durand, Alain Paquette, Nelson Thiffault, Christian Messier, Nadyre Beaulieu, Claude Guertin, Philippe Constant
Software Mentions: 5
Published: over 10 years ago

10.1186/1471-2164-14-850

Midgut transcriptome profiling of Anoplophora glabripennis, a lignocellulose degrading cerambycid beetle
Cited by: 62
Author(s): Erin D. Scully, Kelli Hoover, John E. Carlson, Ming Tien, Scott M. Geib
Software Mentions: 5
Published: almost 13 years ago

10.1371/journal.pone.0236796

Comparative study of neighboring Holm oak and olive trees-belowground microbial communities subjected to different soil management
Cited by: 9
Author(s): Antonio J. Fernández‐González, Nuria M. Wentzien, Pablo J. Villadas, Antonio Valverde-Corredor, Ana V. Lasa, Carmen Gómez-Lama Cabanás, Jesús Mercado‐Blanco, Manuel Fernández‐López
Software Mentions: 5
Published: about 6 years ago

10.7717/peerj.11836

Potential oxygen consumption and community composition of sediment bacteria in a seasonally hypoxic enclosed bay
Cited by: 4
Author(s): Fumiaki Mori, Yu Umezawa, Ryou Kondo, Gregory N. Nishihara, Mitsuru Wada
Software Mentions: 5
Published: about 5 years ago

10.4269/ajtmh.18-0469

Potential Biological Control of Schistosomiasis by Fishes in the Lower Senegal River Basin
Cited by: 11
Author(s): Martin C. Arostegui, Chelsea L. Wood, Isabel J. Jones, Andrew J. Chamberlin, Nicolas Jouanard, Daouda Faye, Armand M. Kuris, Gilles Riveau, Giulio A. De Leo, Susanne H. Sokolow
Software Mentions: 5
Published: over 7 years ago

10.3390/insects12070584

Intrasexual Vibrational Behavior of Philaenus spumarius in Semi-Field Conditions
Cited by: 5
Author(s): Imane Akassou, Sabina Avosani, Valentina Zaffaroni Caorsi, Vincenzo Verrastro, Marco Ciolli, Valerio Mazzoni
Software Mentions: 5
Published: about 5 years ago

10.1186/s12864-021-07471-y

Exploring short k-mer profiles in cells and mobile elements from Archaea highlights the major influence of both the ecological niche and evolutionary history
Cited by: 8
Author(s): Ariane Bize, Cédric Midoux, Mahendra Mariadassou, Sophie Schbath, Patrick Forterre, Violette Da Cunha
Software Mentions: 5
Published: over 5 years ago

10.1007/s00248-019-01435-2

The Bacterial Flora Associated with the Polyphagous Aphid Aphis gossypii Glover (Hemiptera: Aphididae) Is Strongly Affected by Host Plants
Cited by: 26
Author(s): Shifen Xu, Li‐Yun Jiang, Ge‐Xia Qiao, Jing Chen
Software Mentions: 5
Published: almost 7 years ago

10.3390/insects10110391

Do Host Plant and Associated Ant Species Affect Microbial Communities in Myrmecophytes?
Cited by: 5
Author(s): Mario X. Ruiz-González, Céline Leroy, Alain Déjean, Hervé Gryta, Patricia Jargeat, Angelo D. Armijos Carrión, Jérôme Orivel
Software Mentions: 5
Published: almost 7 years ago

10.1111/1751-7915.13441

Direct effects of organic pollutants on the growth and gene expression of the Baltic Sea model bacterium Rheinheimera sp. <scp>BAL</scp>341
Cited by: 12
Author(s): Christofer M. G. Karlsson, Elena Cerro‐Gálvez, Daniel Lundin, Camilla Karlsson, Maria Vila‐Costa, Jarone Pinhassi
Software Mentions: 5
Published: about 7 years ago

10.1002/ece3.6662

Major histocompatibility complex variation is similar in little brown bats before and after white‐nose syndrome outbreak
Cited by: 3
Author(s): Xueling Yi, Deahn M. Donner, Paula E. Marquardt, Jonathan M. Palmer, Michelle A. Jusino, Jacqueline L. Frair, Daniel L. Lindner, Emily K. Latch
Software Mentions: 5
Published: about 6 years ago

10.1186/s12876-018-0860-5

Changes in microbiota composition, bile and fatty acid metabolism, in successful faecal microbiota transplantation for Clostridioides difficile infection
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Author(s): Jillian R. Brown, Burkhardt Flemer, Susan A. Joyce, Akbar Zulquernain, Donal Sheehan, Fergus Shanahan, Paul W. O’Toole
Software Mentions: 5
Published: about 8 years ago

10.1007/s00248-019-01412-9

Variation in the Microbiota Associated with Daphnia magna Across Genotypes, Populations, and Temperature
Cited by: 32
Author(s): Jonas Frankel-Bricker, Michael Song, Maia J. Benner, Sarah Schaack
Software Mentions: 5
Published: about 7 years ago

10.1371/journal.pone.0105043

Phylobetadiversity among Forest Types in the Brazilian Atlantic Forest Complex
Cited by: 56
Author(s): Leandro da Silva Duarte, Rodrigo Scarton Bergamin, Vinícius Marcilio-Silva, Guilherme Dubal dos Santos Seger, Márcia C. M. Marques
Software Mentions: 5
Published: about 12 years ago

10.1038/srep45651

Patterns in the skin microbiota differ in children and teenagers between rural and urban environments
Cited by: 85
Author(s): Jenni Lehtimäki, Antti Karkman, Tiina Laatikainen, Laura Paalanen, Leena von Hertzen, Tari Haahtela, Ilkka Hanski, Lasse Ruokolainen
Software Mentions: 5
Published: over 9 years ago

10.1111/1751-7915.13313

Long-term investigation of microbial community composition and transcription patterns in a biogas plant undergoing ammonia crisis
Cited by: 16
Author(s): Martin Fischer, Simon Güllert, Sarah Refai, Sven Künzel, Uwe Deppenmeier, Wolfgang R. Streit, Ruth A. Schmitz
Software Mentions: 5
Published: almost 8 years ago

10.1007/s00248-020-01657-9

Identifying Potential Hosts of Short-Branch Microsporidia
Cited by: 3
Author(s): Annemie Doliwa, Micah Dunthorn, Erika Rassoshanska, Frédéric Mahe, David Bass, Camila Duarte Ritter
Software Mentions: 5
Published: over 5 years ago

10.3389/fmolb.2019.00115

Diazotroph Diversity and Nitrogen Fixation in Summer Active Perennial Grasses in a Mediterranean Region Agricultural Soil
Cited by: 26
Author(s): Vadakattu V. S. R. Gupta, Bangzhou Zhang, C. Ryan Penton, Julian Yu, James M. Tiedje
Software Mentions: 5
Published: almost 7 years ago

10.3389/fonc.2021.650026

Fecal Microbiota and Gut Microbe-Derived Extracellular Vesicles in Colorectal Cancer
Cited by: 33
Author(s): Jihye Park, Nam-Eun Kim, Hyuk Yoon, Cheol Min Shin, Nayoung Kim, Dong Hoon Lee, Jae Yong Park, Chang Hwan Choi, Jae Gyu Kim, Eui Chong Kim, Tae-Seop Shin, Jinho Yang, Young Soo Park
Software Mentions: 5
Published: about 5 years ago

10.1002/ece3.6219

Keeping it cool: Soil sample cold pack storage and DNA shipment up to 1 month does not impact metabarcoding results
Cited by: 17
Author(s): Camille S. Delavaux, James D. Bever, Erin M. Karppinen, Luke D. Bainard
Software Mentions: 5
Published: over 6 years ago

10.3389/fneur.2020.528056

Oral Health, Oral Microbiota, and Incidence of Stroke-Associated Pneumonia—A Prospective Observational Study
Cited by: 14
Author(s): Fabian Cieplik, Alma Maria Wiedenhofer, Verena Pietsch, Karl‐Anton Hiller, Andreas Hiergeist, Andrea Wagner, Dobri Baldaranov, Ralf A. Linker, Jonathan Jantsch, Wolfgang Buchalla, Felix Schlachetzki, André Gessner
Software Mentions: 5
Published: almost 6 years ago

10.1098/rstb.2013.0342

Evaluation of genetic isolation within an island flora reveals unusually widespread local adaptation and supports sympatric speciation
Cited by: 44
Author(s): Alexander S. T. Papadopulos, Maria Kaye, Céline Devaux, Helen Hipperson, Jackie Lighten, Luke T. Dunning, I. Hutton, William J. Baker, Roger K. Butlin, Vincent Savolainen
Software Mentions: 5
Published: about 12 years ago

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