Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: timeROC
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/timeROC
Time-Dependent ROC Curve and AUC for Censored Survival Data
4 versions
Latest release: almost 5 years ago
6 dependent packages
2,216 downloads last month
Papers Mentioning timeROC 254
10.3389/fonc.2021.665497
A Novel Post-Operative ALRI Model Accurately Predicts Clinical Outcomes of Resected Hepatocellular Carcinoma PatientsCited by: 4
Author(s): Minjun Liao, Jiarun Sun, Qifan Zhang, Cuirong Tang, Yuchen Zhou, Mingrong Cao, Tao Chen, Chengguang Hu, Junxiong Yu, Ye-Qiong Song, Meng Li, Weijia Liao, Yuanping Zhou
Software Mentions: 3
Published: over 3 years ago
10.1186/s12876-021-01785-7
Combination of tumor markers predicts progression and pathological response in patients with locally advanced gastric cancer after neoadjuvant chemotherapy treatmentCited by: 5
Author(s): Zining Liu, Yinkui Wang, Fei Shan, Xiangji Ying, Yan Zhang, Shuangxi Li, Yongning Jia, Rulin Miao, Kan Xue, Zhemin Li, Ziyu Li, Jiafu Ji
Software Mentions: 3
Published: over 3 years ago
10.3390/genes9020078
DNA Methylation and All-Cause Mortality in Middle-Aged and Elderly Danish TwinsCited by: 26
Author(s): Anne Marie Svane, Mette Soerensen, Jesper Lund, Qihua Tan, Juulia Jylhävä, Yunzhang Wang, Nancy L. Pedersen, Sara Hägg, Birgit Debrabant, Ian J. Deary, Kaare Christensen, Lene Christiansen, Jacob Hjelmborg
Software Mentions: 3
Published: almost 7 years ago
10.1186/s12885-021-08250-4
A nomogram predicting overall survival in patients with non-metastatic pancreatic head adenocarcinoma after surgery: a population-based studyCited by: 5
Author(s): Wei Zou, Zizheng Wang, Fei Wang, Gong Zhang, Rong Liu
Software Mentions: 3
Published: over 3 years ago
10.18632/oncotarget.18158
Evaluation of the 7th and 8th editions of the AJCC/UICC TNM staging systems for lung cancer in a large North American cohortCited by: 58
Author(s): Lin Yang, Shidan Wang, Yunyun Zhou, Shangqi Lai, Guanghua Xiao, Adi F. Gazdar, Yang Xie
Software Mentions: 3
Published: over 7 years ago
10.1038/s41598-021-92298-6
Prediction model for early graft failure after liver transplantation using aspartate aminotransferase, total bilirubin and coagulation factorCited by: 12
Author(s): Jinsoo Rhu, Jong Man Kim, Kyunga Kim, Heejin Yoo, Gyu‐Seong Choi, Jae‐Won Joh
Software Mentions: 3
Published: over 3 years ago
10.1186/s12885-016-2684-4
Nomograms to predict survival after colorectal cancer resection without preoperative therapyCited by: 52
Author(s): Zhenyu Zhang, Qifeng Luo, Xinmin Yin, Zhen-ling Dai, Shiva Basnet, Haiyan Ge
Software Mentions: 3
Published: over 8 years ago
10.3389/fcell.2021.619549
A Novel DNA Replication-Related Signature Predicting Recurrence After R0 Resection of Pancreatic Ductal Adenocarcinoma: Prognostic Value and Clinical ImplicationsCited by: 2
Author(s): Zengyu Feng, Kexian Li, Jianyao Lou, Mindi Ma, Yulian Wu, Chenghong Peng
Software Mentions: 3
Published: over 3 years ago
10.3389/fgene.2021.669549
Prognostic Immune-Related Genes of Patients With Ewing’s SarcomaCited by: 6
Author(s): Yangfan Zhou, Bin Xu, Shusheng Wu, Yulian Liu
Software Mentions: 3
Published: over 3 years ago
10.3389/fcell.2021.739509
Integrated Analysis of Stemness-Related LncRNAs Helps Predict the Immunotherapy Responsiveness of Gastric Cancer PatientsCited by: 1
Author(s): Quan Jiang, Lingli Chen, Hao Chen, Zhaoqing Tang, Fenglin Liu, Yihong Sun
Software Mentions: 3
Published: about 3 years ago
10.7150/ijms.57504
Roles of the miR-139-5p/CCT5 axis in hepatocellular carcinoma: a bioinformatic analysisCited by: 7
Author(s): Jingjing Xu, Yuan Zhang, Cheng Liu, Ping Yan, Zongguo Yang
Software Mentions: 2
Published: almost 4 years ago
10.7717/peerj.11258
Development and validation of an oxidative stress—associated prognostic risk model for melanomaCited by: 7
Author(s): Yang Yu, Xuan Long, Kun Li, Guiyun Li, Xin Yu, Ping Wen, Jun Luo, Xiaobin Tian, Jinmin Zhao
Software Mentions: 2
Published: over 3 years ago
10.3389/fcell.2021.661105
Integrative Analysis Identified a 6-miRNA Prognostic Signature in Nasopharyngeal CarcinomaCited by: 1
Author(s): Yunqin Chen, Zhen Wang, Hong Li, Yixue Li
Software Mentions: 2
Published: over 3 years ago
10.3390/ijms20153713
Analysis of Survival-Related lncRNA Landscape Identifies A Role for LINC01537 in Energy Metabolism and Lung Cancer ProgressionCited by: 28
Author(s): Wei Gong, Lei Yang, Yuanyuan Wang, Jianfeng Xian, Fuman Qiu, Li Liu, Mingzhu Lin, Yingyi Feng, Yifeng Zhou, Jiachun Lü
Software Mentions: 2
Published: over 5 years ago
10.3389/fendo.2021.713357
Heterogeneous miRNA-mRNA Regulatory Networks of Visceral and Subcutaneous Adipose Tissue in the Relationship Between Obesity and Renal Clear Cell CarcinomaCited by: 1
Author(s): Yuyan Liu, Yang Liu, Jiajin Hu, Zhenwei He, Lei Liu, Yanan Ma, Deliang Wen
Software Mentions: 2
Published: about 3 years ago
10.1186/s12935-019-0828-8
The DNA methylation profile of non-coding RNAs improves prognosis prediction for pancreatic adenocarcinomaCited by: 13
Author(s): Jie Zhang, Ke‐Qing Shi, Weiguo Huang, Wanqing Weng, Zhongjing Zhang, Yangyang Guo, Tuo Deng, Yukai Xiang, Xiaofeng Ni, Bicheng Chen, Mengtao Zhou
Software Mentions: 2
Published: over 5 years ago
10.18632/aging.103369
Identification of an immune-related long non-coding RNA signature and nomogram as prognostic target for muscle-invasive bladder cancerCited by: 20
Author(s): Yuxuan Song, Donghui Jin, Jingyi Chen, Zhiwen Luo, Peng Huang, Yongjiao Yang, Xiaoqiang Liu
Software Mentions: 2
Published: over 4 years ago
10.3389/fonc.2021.629868
Identification of Novel Prognostic Risk Signatures of Soft Tissue Sarcoma Based on Ferroptosis-Related GenesCited by: 12
Author(s): Wenjing Huang, Yuhe Duan, Xiuwei H. Yang, Cong Shang, Xin Chen, Huanyu Zhang, Fujiang Li
Software Mentions: 2
Published: over 3 years ago
10.3389/fonc.2020.01740
Comprehensive Analysis of Prognostic Alternative Splicing Signatures in Oral Squamous Cell CarcinomaCited by: 10
Author(s): Ruoyan Cao, Jiayu Zhang, Laibo Jiang, Yanting Wang, Xianyue Ren, Bin Cheng, Juan Xia
Software Mentions: 2
Published: about 4 years ago
10.1186/s12882-021-02329-7
C-terminal and intact FGF23 in kidney transplant recipients and their associations with overall graft survivalCited by: 13
Author(s): Chang Chu, Saban Elitok, Shufei Zeng, Yingquan Xiong, Carl-Friedrich Hocher, Ahmed A. Hasan, Bernhard K. Krämer, Berthold Hocher
Software Mentions: 2
Published: over 3 years ago
10.1001/jamanetworkopen.2021.24721
Assessment of Survival Model Performance Following Inclusion of Epstein-Barr Virus DNA Status in Conventional TNM Staging Groups in Epstein-Barr Virus–Related Nasopharyngeal CarcinomaCited by: 10
Author(s): Wang‐Zhong Li, Haijian Wu, Shu‐Hui Lv, Xuefeng Hu, Liang Hu, Guoying Li, Nian Lu, Wei-Xin Bei, Xing Lv, Xiang Guo, Wei‐Xiong Xia, Yan‐Qun Xiang
Software Mentions: 2
Published: about 3 years ago
10.3389/fonc.2021.683475
Establishment of a Prognostic Nomogram for Patients With Locoregionally Advanced Nasopharyngeal Carcinoma Incorporating TNM Stage, Post-Induction Chemotherapy Tumor Volume and Epstein-Barr Virus DNA LoadCited by: 9
Author(s): Yuting Jiang, Kaihua Chen, Jie Yang, Zhong‐Guo Liang, Song Qu, Ling Li, Xiaodong Zhu
Software Mentions: 2
Published: over 3 years ago
10.7150/jca.47629
Development and validation of a metastasis-related Gene Signature for predicting the Overall Survival in patients with Pancreatic Ductal AdenocarcinomaCited by: 24
Author(s): Mei Wu, Xiaobin Li, Rui Li, Yuan Hu, Wei Liu, Ziwen Liu
Software Mentions: 2
Published: almost 5 years ago
10.3389/fonc.2021.710649
Radiomics Analysis of Fat-Saturated T2-Weighted MRI Sequences for the Prediction of Prognosis in Soft Tissue Sarcoma of the Extremities and Trunk Treated With Neoadjuvant RadiotherapyCited by: 5
Author(s): Silin Chen, Ning Li, Yuan Tang, Bin Chen, Hui Fang, Shunan Qi, Ninging Lu, Yong Yang, Yong-Wen Song, Yueping Liu, Shulian Wang, Yexiong Li, Jing Jin
Software Mentions: 2
Published: about 3 years ago
10.1186/s12916-021-02074-6
Predicting the risk of mortality during hospitalization in sick severely malnourished children using daily evaluation of key clinical warning signsCited by: 6
Author(s): Bijun Wen, Daniëlla Brals, Céline Bourdon, Lauren Erdman, Moses Ngari, Emmanuel Chimwezi, Isabel Potani, Johnstone Thitiri, Laura Mwalekwa, James A. Berkley, Robert Bandsma, Wieger Voskuijl
Software Mentions: 2
Published: about 3 years ago
10.3389/fgene.2021.664393
Construction and Analysis of the Dysregulated ceRNA Network and Identification of Risk Long Noncoding RNAs in Breast CancerCited by: 10
Author(s): Xiaojie Su, Zhaoyan Yu, Yuexin Zhang, Jiaxin Chen, Ling Wei, Liang Sun
Software Mentions: 2
Published: over 3 years ago
10.1186/s12916-021-01916-7
Implications of the ACC/AHA risk score for prediction of heart failure: the Rotterdam StudyCited by: 6
Author(s): Banafsheh Arshi, J Berge, Bart van Dijk, Jaap W. Deckers, M. Arfan Ikram, Maryam Kavousi
Software Mentions: 2
Published: almost 4 years ago
10.3389/pore.2021.1609968
Identification of Novel Diagnosis Biomarkers for Therapy-Related Neuroendocrine Prostate CancerCited by: 5
Author(s): Cuijian Zhang, Jinqin Qian, Yucai Wu, Zhenpeng Zhu, Wei Yu, Yanqing Gong, Xuesong Li, Zhisong He, Liqun Zhou
Software Mentions: 2
Published: about 3 years ago
10.3389/fimmu.2020.621623
An Immune Cell Signature Is Associated With Disease-Free Survival and Adjuvant Chemosensitivity of Patients With Resectable Gastric CancerCited by: 5
Author(s): Hongfei Yan, Yang Chen, Zichang Yang, Zhi Li, Xiaofang Che, Jiawen Xiao, Yunpeng Liu, Xiujuan Qu
Software Mentions: 2
Published: almost 4 years ago
10.1186/s12885-020-07390-3
High platelet-to-lymphocyte ratio is associated with poor prognosis in patients with unresectable intrahepatic cholangiocarcinoma receiving gemcitabine plus cisplatinCited by: 15
Author(s): Gunn Huh, Jihye Ryu, Jung Won Chun, Joo Seong Kim, Namyoung Park, In Rae Cho, Woo Hyun Paik, Sang Hyub Lee, Yong Tae Kim
Software Mentions: 2
Published: about 4 years ago
10.1038/s41598-021-93289-3
Prognostic significance of preoperative systemic inflammatory biomarkers in patients with hepatocellular carcinoma after microwave ablation and establishment of a nomogramCited by: 5
Author(s): Shuai Wang, Yan Deng, Xiao Yu, Xuewen Zhang, Cheng-Long Huo, Zhen Sun, Hong Chang
Software Mentions: 2
Published: over 3 years ago
10.1186/s12935-021-01903-1
High CFP score indicates poor prognosis and chemoradiotherapy response in LARC patientsCited by: 7
Author(s): Siyi Lu, Zhenzhen Liu, Bingyan Wang, Fēi Li, Yan Meng, Junwei Wang, Yuxia Wang, Hao Wang, Xin Zhou, Wei Fu
Software Mentions: 2
Published: over 3 years ago
10.1186/s13046-021-02103-5
PFKFB4 is overexpressed in clear-cell renal cell carcinoma promoting pentose phosphate pathway that mediates Sunitinib resistanceCited by: 18
Author(s): Chenchen Feng, Yuqing Li, Kunping Li, Yinfeng Lyu, Wenhui Zhu, Haowen Jiang, Hao Wen
Software Mentions: 2
Published: about 3 years ago
10.7717/peerj.7353
A six-microRNA signature can better predict overall survival of patients with esophagus adenocarcinomaCited by: 7
Author(s): Tian Lan, Yunyan Lu, Zunqiang Xiao, Huiling Xu, Jinlan He, Zujian Hu, Weimin Mao
Software Mentions: 2
Published: over 5 years ago
10.1038/s41416-020-0901-z
Prognostic significance of pre- and post-operative tumour markers for patients with gastric cancerCited by: 28
Author(s): Jie Lin, Lin Ji, Yu-Bin Ma, Jian‐Wei Xie, Yan Su, Jia-Bin Wang, Jun Lü, Qi‐Yue Chen, Xinfu Ma, Long‐Long Cao, Lin Ma, Ru‐Hong Tu, Chao‐Hui Zheng, Ping Li, Chang‐Ming Huang
Software Mentions: 1
Published: over 4 years ago
10.1186/s12872-019-1178-0
Predicting stroke and death in patients with heart failure using CHA2DS2-VASc score in AsiaCited by: 12
Author(s): Mi Kyoung Son, Nam-Kyoo Lim, Hyun-Young Park
Software Mentions: 1
Published: over 5 years ago
10.3389/fcell.2020.606327
Progression Risk Assessment of Post-surgical Papillary Thyroid Carcinoma Based on Circular RNA-Associated Competing Endogenous RNA MechanismsCited by: 3
Author(s): Mei Wu, Shuo Li, Jiashu Han, Rui Li, Yuan Hu, Xiequn Xu, Xiaobin Li, Ziwen Liu
Software Mentions: 1
Published: almost 4 years ago
10.1186/s12885-020-07496-8
Integrated analysis of serum lipid profile for predicting clinical outcomes of patients with malignant biliary tumorCited by: 3
Author(s): Lejia Sun, Xin Ji, Dongyue Wang, Ai Guan, Yao Xiao, Haifeng Xu, Shunda Du, Yiyao Xu, Haitao Zhao, Xin Lü, Xinting Sang, Shouxian Zhong, Huayu Yang, Yilei Mao
Software Mentions: 1
Published: about 4 years ago
10.1002/cam4.3640
<i>OGDHL</i>closely associates with tumor microenvironment and can serve as a prognostic biomarker for papillary thyroid cancerCited by: 8
Author(s): Min Mao, Rongzhi Huang, Jie Zheng, Liang Hai-qi, Wenhui Huang, Jing Liu, Jiehua Li
Software Mentions: 1
Published: almost 4 years ago
10.1186/s12885-019-6466-7
Complete blood count-based inflammatory score (CBCS) is a novel prognostic marker for gastric cancer patients after curative resectionCited by: 16
Author(s): Lin Ji, Jie Lin, Jian‐Wei Xie, Jia-Bin Wang, Jun Lü, Qi‐Yue Chen, Long‐Long Cao, Lin Ma, Ru‐Hong Tu, Chao-Hui Zheng, Chang‐Ming Huang, Ping Li
Software Mentions: 1
Published: almost 5 years ago
10.1002/cam4.3738
Comparative prognostic value of different preoperative complete blood count cell ratios in patients with oral cavity cancer treated with surgery and postoperative radiotherapyCited by: 9
Author(s): Yao-Yu Wu, Kai Ping Chang, Tsung-Ying Ho, Wen‐Chi Chou, Sheng-Ping Hung, Kang‐Hsing Fan, Yin-Yin Chiang, Yi–Hong Chou, Ngan‐Ming Tsang
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pone.0233310
Indexation of left ventricular mass to predict adverse clinical outcomes in pre-dialysis patients with chronic kidney disease: KoreaN cohort study of the outcome in patients with chronic kidney diseaseCited by: 4
Author(s): Sung Woo Lee, Hyang Ki Min, Dong‐Wan Chae, Kook‐Hwan Oh, Curie Ahn, Wookyung Chung, Joongyub Lee, Yong‐Soo Kim, Suah Sung
Software Mentions: 1
Published: over 4 years ago
10.3390/cancers12051235
A Preoperative Clinical Risk Score Including C-Reactive Protein Predicts Histological Tumor Characteristics and Patient Survival after Surgery for Sporadic Non-Functional Pancreatic Neuroendocrine Neoplasms: An International Multicenter Cohort StudyCited by: 11
Author(s): Florian Primavesi, Valentina Andreasi, Frederik J.H. Hoogwater, Stefano Partelli, Dominik Wiese, Charlotte M. Heidsma, Benno Cardini, E. Klieser, Katharina Marsoner, Uwe Fröschl, Sabine Thalhammer, Ines Fischer, Georg Göbel, A. Hauer, Tobias Kiesslich, Philipp Ellmerer, R. Klug, Daniel Neureiter, Helwig Wundsam, F. Sellner, Peter Kornprat, R. Függer, Dietmar Öfner, E. J. M. Nieveen van Dijkum, Detlef K. Bartsch, Ruben de Kleine, Massimo Falconi, Stefan Stättner
Software Mentions: 1
Published: over 4 years ago
10.3389/fcell.2021.698296
Immune Subtypes Based on Immune-Related lncRNA: Differential Prognostic Mechanism of Pancreatic CancerCited by: 8
Author(s): Qiyao Zhang, Zhihui Wang, Xiao Yu, Menggang Zhang, Qingyuan Zheng, Yuting He, Wenzhi Guo
Software Mentions: 1
Published: over 3 years ago
10.1155/2021/6686284
The Identification and Validation of a Robust Immune-Associated Gene Signature in Cutaneous MelanomaCited by: 7
Author(s): Lebin Song, Jiaochen Luan, Qijie Zhang, Lin Chen, Haoyang Wang, Xue-Chen Cao, Ninghong Song, Yan Lü
Software Mentions: 1
Published: almost 4 years ago
10.18632/aging.202752
Integrative radiogenomics analysis for predicting molecular features and survival in clear cell renal cell carcinomaCited by: 17
Author(s): Hao Zeng, Linyan Chen, Manni Wang, Yuling Luo, Yeqian Huang, Xuelei Ma
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pcbi.1002975
Network-based Survival Analysis Reveals Subnetwork Signatures for Predicting Outcomes of Ovarian Cancer TreatmentCited by: 143
Author(s): Wei Zhang, Takayo Ota, Viji Shridhar, Jeremy Chien, Baolin Wu, Rui Kuang
Software Mentions: 1
Published: over 11 years ago
10.1155/2021/6471169
Identification of Nephrogenic Therapeutic Biomarkers of Wilms Tumor Using Machine LearningCited by: 2
Author(s): Hanxiang Liu, Chaozhi Tang, Yi Yang
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pone.0218621
Performance of preoperative plasma tumor markers HE4 and CA125 in predicting ovarian cancer mortality in women with epithelial ovarian cancerCited by: 14
Author(s): Daniela Furrer, Jean Grégoire, Stéphane Turcotte, Marie Plante, Dimcho Bachvarov, Dominique Trudel, Bernard Têtu, Pierre Douville, Isabelle Bairati
Software Mentions: 1
Published: over 5 years ago
10.1186/s12874-017-0382-9
Nonlinear joint models for individual dynamic prediction of risk of death using Hamiltonian Monte Carlo: application to metastatic prostate cancerCited by: 27
Author(s): Solène Desmée, Christine Veyrat‐Follet, Bernard Sébastien, Jérémie Guedj
Software Mentions: 1
Published: over 7 years ago
10.18632/oncotarget.21369
Prediction model of hepatocellular carcinoma risk in Asian patients with chronic hepatitis B treated with entecavirCited by: 40
Author(s): Chien Hung Chen, Chuan Mo Lee, Hsueh Chou Lai, Tsung Hui Hu, Wen Pang Su, Sheng Lu, Chia Hsin Lin, Chao Hung Hung, Jing Houng Wang, Hsuan-Shu Lee, Cheng Yuan Peng
Software Mentions: 1
Published: about 7 years ago
10.1371/journal.pone.0217411
Primary tumour location affects survival after resection of colorectal liver metastases: A two-institutional cohort study with international validation, systematic meta-analysis and a clinical risk scoreCited by: 26
Author(s): Elisabeth Gasser, Eva Braunwarth, Marina Riedmann, Benno Cardini, Nikolaus Fadinger, J Presl, E. Klieser, Philipp Ellmerer, Aurélien Dupré, Katsunori Imai, Hassan Malik, Hideo Baba, Hanno Ulmer, Stefan Schneeberger, Dietmar Öfner, Adam Dinnewitzer, Stefan Stättner, Florian Primavesi
Software Mentions: 1
Published: over 5 years ago
10.1186/s12879-021-06585-8
Clinical characteristics and risk factors of fatal patients with COVID-19: a retrospective cohort study in Wuhan, ChinaCited by: 16
Author(s): Meng Jin, Zequn Lu, Xu Zhang, Yanan Wang, Jing Wang, Yimin Cai, Kunming Tian, Zezhong Xiong, Qiang Zhong, Ran Xiao, Chunguang Yang, Xing Zeng, Lu Wang, Li Yao, Shanshan Zhang, Tianyi Dong, Xinying Yue, Heng Li, Bo Liu, Xin Chen, Hongyuan Cui, Jirong Qi, Haining Fan, Haixia Li, Xun Yang, Zhiquan Hu, Shaogang Wang, Jun Xiao, Ying Wáng, Jianbo Tian, Zhihua Wang
Software Mentions: 1
Published: about 3 years ago