cran: tcl | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0211608

Managing genomic variant calling workflows with Swift/T
Cited by: 7
Author(s): Azza E. Ahmed, Jacob R Heldenbrand, Yan W. Asmann, Faisal M. Fadlelmola, Daniel S. Katz, Katherine Kendig, Matthew Kendzior, Tiffany Li, Yingxue Ren, Elliott Rodriguez, Matthew Weber, Justin M. Wozniak, Jennie Zermeno, Liudmila Sergeevna Mainzer
Software Mentions: 6
Published: over 5 years ago

10.3389/fchem.2020.598710

Discovery of 5,5′-Methylenedi-2,3-Cresotic Acid as a Potent Inhibitor of the Chemotactic Activity of the HMGB1·CXCL12 Heterocomplex Using Virtual Screening and NMR Validation
Cited by: 3
Author(s): Federica De Leo, Giacomo Quilici, Francesco De Marchis, Malisa Vittoria Mantonico, Marco E. Bianchi, Giovanna Musco
Software Mentions: 3
Published: almost 4 years ago

10.1038/s41598-020-80769-1

Automation of absolute protein-ligand binding free energy calculations for docking refinement and compound evaluation
Cited by: 41
Author(s): Germano Heinzelmann, Michael K. Gilson
Software Mentions: 3
Published: almost 4 years ago

10.1371/journal.pone.0200621

The fast contribution of visual-proprioceptive discrepancy to reach aftereffects and proprioceptive recalibration
Cited by: 22
Author(s): Jennifer E. Ruttle, Bernard Marius ‘t Hart, Denise Y. P. Henriques
Software Mentions: 3
Published: over 6 years ago

10.1074/jbc.M116.770271

Nanostructure and stability of calcitonin amyloids
Cited by: 14
Author(s): Federica Rigoldi, Pierangelo Metrangolo, Alberto Redaelli, Alfonso Gautieri
Software Mentions: 3
Published: over 7 years ago

10.1186/1471-2105-10-41

STAMP: Extensions to the STADEN sequence analysis package for high throughput interactive microsatellite marker design
Cited by: 37
Author(s): Lars Kraemer, Bánk Beszteri, Steffi Gäbler‐Schwarz, Christoph Held, Florian Leese, Christoph Mayer, Kevin Pöhlmann, Stephan Frickenhaus
Software Mentions: 3
Published: almost 16 years ago

10.1186/s12915-021-01102-4

High-resolution structure of the amino acid transporter AdiC reveals insights into the role of water molecules and networks in oligomerization and substrate binding
Cited by: 9
Author(s): Hüseyin İlgü, Jean-Marc Jeckelmann, David Kalbermatter, Zöhre Ucurum, Thomas Lemmin, Dimitrios Fotiadis
Software Mentions: 3
Published: about 3 years ago

10.3389/fchem.2020.00107

Exploring the RNA-Recognition Mechanism Using Supervised Molecular Dynamics (SuMD) Simulations: Toward a Rational Design for Ribonucleic-Targeting Molecules?
Cited by: 14
Author(s): Maicol Bissaro, Mattia Sturlese, Stefano Moro
Software Mentions: 3
Published: over 4 years ago

10.1007/s00232-020-00152-z

Phosphatidylglyerol Lipid Binding at the Active Site of an Intramembrane Protease
Cited by: 6
Author(s): Ana‐Nicoleta Bondar
Software Mentions: 2
Published: about 4 years ago

10.1186/1471-2466-7-15

Software for interpreting cardiopulmonary exercise tests
Cited by: 7
Author(s): Robert Ross, David B. Corry
Software Mentions: 2
Published: about 17 years ago

10.3390/biom11070996

Crystal Structure Reveals the Full Ras–Raf Interface and Advances Mechanistic Understanding of Raf Activation
Cited by: 28
Author(s): Trinity Cookis, Carla Mattos
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0207899

Conformational sampling of CpxA: Connecting HAMP motions to the histidine kinase function
Cited by: 1
Author(s): Nathalie Duclert-Savatier, Guillaume Bouvier, Michaël Nilges, Thérèse E. Malliavin
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0178519

How do SMA-linked mutations of SMN1 lead to structural/functional deficiency of the SMA protein?
Cited by: 14
Author(s): Wei Li
Software Mentions: 2
Published: over 7 years ago

10.3389/fmolb.2020.00162

The Voltage-Dependent Deactivation of the KvAP Channel Involves the Breakage of Its S4 Helix
Cited by: 2
Author(s): Olivier Bignucolo, Simon Bernèche
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0052289

The Endocranial Anatomy of Therizinosauria and Its Implications for Sensory and Cognitive Function
Cited by: 67
Author(s): Stephan Lautenschlager, Emily J. Rayfield, Perle Altangerel, Lindsay E. Zanno, Lawrence M. Witmer
Software Mentions: 1
Published: almost 12 years ago

10.1080/19336950.2019.1676367

The influence of membrane bilayer thickness on KcsA channel activity
Cited by: 12
Author(s): Karen M. Callahan, Benoit Mondou, Louis J. Sasseville, Jean-Louis Schwartz, Nazzareno D’Avanzo
Software Mentions: 1
Published: almost 6 years ago

10.1093/database/baw007

2P2Idb v2: update of a structural database dedicated to orthosteric modulation of protein–protein interactions
Cited by: 59
Author(s): Marie Jeanne Basse, S. Betzi, Xavier Morelli, Philippe Roché
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0069882

Schiff Base Switch II Precedes the Retinal Thermal Isomerization in the Photocycle of Bacteriorhodopsin
Cited by: 6
Author(s): Ting Wang, Marc T. Facciotti, Yong Duan
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pcbi.0010062

The Association of Tetrameric Acetylcholinesterase with ColQ Tail: A Block Normal Mode Analysis
Cited by: 16
Author(s): Deqiang Zhang, J. Andrew McCammon
Software Mentions: 1
Published: about 19 years ago

10.3389/fmolb.2020.00058

Structural and Functional Analysis of Gly212 Mutants Reveals the Importance of Intersubunit Interactions in ASIC1a Channel Function
Cited by: 7
Author(s): Olivier Bignucolo, Sabrina Vullo, Nicolas Ambrosio, Ivan Gautschi, Stephan Kellenberger
Software Mentions: 1
Published: over 4 years ago

Ecosyste.ms: Papers

Projects: cran: tcl

Papers Mentioning tcl 27