cran: survival | Projects | Ecosyste.ms: Papers

10.3389/fmed.2021.744295

A 41-Gene Pair Signature for Predicting the Pathological Response of Locally Advanced Rectal Cancer to Neoadjuvant Chemoradiation
Cited by: 1
Author(s): Zhengfa Xue, Shuxin Yang, Yun Luo, Hao Cai, Mingwei He, Youping Ding, Lei Lei, Peng Wei, Hong Guan, You Guo
Software Mentions: 6
Published: about 5 years ago

10.1371/journal.pone.0257072

Cytochrome P450-2D6: A novel biomarker in liver cancer health disparity
Cited by: 7
Author(s): Zahraa I. Khamis, Xiaodong Pang, Zihan Cui, Qing-Xiang Amy Sang, Jinfeng Zhang
Software Mentions: 6
Published: about 5 years ago

10.1155/2020/5816763

Screening of T Cell-Related Long Noncoding RNA-MicroRNA-mRNA Regulatory Networks in Non-Small-Cell Lung Cancer
Cited by: 6
Author(s): Jinping Duan, Yuefen Pan, Yang Xi, Liping Zhong, Jia Yin, Jingying Xu, Zhuang Jing, Shuwen Han
Software Mentions: 6
Published: almost 6 years ago

10.7150/jca.50413

Construction of a Glycolysis-related long noncoding RNA signature for predicting survival in endometrial cancer
Cited by: 27
Author(s): Yuan Jiang, Jie Chen, Jiwei Ling, Xiaonian Zhu, Pinping Jiang, Xiaohu Tang, Huaqiang Zhou, Rong Li
Software Mentions: 6
Published: almost 6 years ago

10.1186/s12885-021-08585-y

Nomogram predict relapse-free survival of patients with thymic epithelial tumors after surgery
Cited by: 5
Author(s): Yuguang Huang, Lingmin Wu, Xuan Li, Shen-Hua Liang, Guowei Ma
Software Mentions: 6
Published: over 5 years ago

10.1371/journal.pone.0238497

Signatures of somatic mutations and gene expression from p16INK4A positive head and neck squamous cell carcinomas (HNSCC)
Cited by: 2
Author(s): Nabil F. Saba, Ashok R. Dinasarapu, Kelly R. Magliocca, Bhakti Dwivedi, Sandra Seby, Zhaohui S. Qin, Mihir R. Patel, Christopher C. Griffith, Xu Wang, Mark W. El‐Deiry, Conor E. Steuer, Jeanne Kowalski, Dong M. Shin, Michael E. Zwick, Zhuo Georgia Chen
Software Mentions: 6
Published: about 6 years ago

10.3389/fonc.2021.630706

The Immune-Related Gene HCST as a Novel Biomarker for the Diagnosis and Prognosis of Clear Cell Renal Cell Carcinoma
Cited by: 5
Author(s): Yongying Zhou, Xiao Wang, Weibing Zhang, Huiyong Liu, Daoquan Liu, Ping Chen, Dongmei Xu, Jianmin Liu, Yan Li, Guang Zeng, Mingzhou Li, Zhonghua Wu, Yingao Zhang, Xinghuan Wang, Michael E. DiSanto, Xinhua Zhang
Software Mentions: 6
Published: over 5 years ago

10.1186/s12885-021-08642-6

Nomograms predict survival of patients with lymph node-positive, luminal a breast cancer
Cited by: 5
Author(s): Yilun Li, Li Ma
Software Mentions: 6
Published: about 5 years ago

10.1186/s13062-018-0213-x

Predicting survival times for neuroblastoma patients using RNA-seq expression profiles
Cited by: 15
Author(s): Tyler Grimes, Alejandro R. Walker, Susmita Datta
Software Mentions: 6
Published: almost 9 years ago

10.7717/peerj.9478

Cellular heterogeneity map of diverse immune and stromal phenotypes within breast tumor microenvironment
Cited by: 5
Author(s): Yuan Li, Zuhua Chen, Long Wu, Junjie Ye, Wenjing Tao
Software Mentions: 6
Published: over 6 years ago

10.1371/journal.pone.0179092

Inter-rater reliability of categorical versus continuous scoring of fish vitality: Does it affect the utility of the reflex action mortality predictor (RAMP) approach?
Cited by: 12
Author(s): Pieter Meeremans, Noëlle Yochum, Marc Kochzius, Bart Ampe, Frank Tuyttens, Sven Sebastian Uhlmann
Software Mentions: 6
Published: over 9 years ago

10.1186/s13195-020-00738-8

Amyloid-β misfolding as a plasma biomarker indicates risk for future clinical Alzheimer’s disease in individuals with subjective cognitive decline
Cited by: 26
Author(s): Julia Stockmann, Inge M.W. Verberk, Nina Timmesfeld, Robin Denz, Brian Budde, Julia Lange-Leifhelm, Philip Scheltens, Wiesje M. van der Flier, Andreas Nabers, Charlotte E. Teunissen, Klaus Gerwert
Software Mentions: 6
Published: almost 6 years ago

10.3389/fonc.2021.725181

Identification of N6-Methylandenosine-Related lncRNAs for Subtype Identification and Risk Stratification in Gastric Adenocarcinoma
Cited by: 9
Author(s): Yuancheng Huang, Zehong Yang, Chao-Yuan Huang, Xiaotao Jiang, Yanhua Yan, Kunhai Zhuang, Yi Wen, Fengbin Liu, Peiwu Li
Software Mentions: 6
Published: about 5 years ago

10.1371/journal.pntd.0008266

Impacts of host gender on Schistosoma mansoni risk in rural Uganda—A mixed-methods approach
Cited by: 14
Author(s): Suzan Trienekens, Christina L. Faust, Keila Meginnis, Lucy Pickering, Olivia Ericsson, Andrina Nankasi, Moses Arinaitwe, Edridah M. Tukahebwa, Poppy H. L. Lamberton
Software Mentions: 6
Published: over 6 years ago

10.3389/fonc.2020.630994

Genetically Predicted C-Reactive Protein Associated With Postmenopausal Breast Cancer Risk: Interrelation With Estrogen and Cancer Molecular Subtypes Using Mendelian Randomization
Cited by: 3
Author(s): Su Yon Jung, Jeanette C. Papp, Eric M. Sobel, Matteo Pellegrini, Herbert Yu, Zuo‐Feng Zhang
Software Mentions: 6
Published: over 5 years ago

10.1136/bmjgast-2020-000593

Diarrhoea and preadmission antibiotic exposure in COVID-19: a retrospective cohort study of 1153 hospitalised patients
Cited by: 1
Author(s): Bilal A. Mateen, Sujay Samanta, Sebastian Tullie, Sarah O’Neill, Zillah Cargill, Gillian Kelly, Ewen Brennan, Mehul Patel, Mohammad Al-Agil, James Galloway, James Teo, Debbie L. Shawcross, Alexandra Kent, BuʼHussain Hayee
Software Mentions: 6
Published: about 5 years ago

10.3389/fonc.2021.639085

Risk Models for Advanced Melanoma Patients Under Anti-PD-1 Monotherapy—Ad hoc Analyses of Pooled Data From Two Clinical Trials
Cited by: 5
Author(s): Xue Bai, Jie Dai, Caili Li, Chuanliang Cui, Lili Mao, Xiaoting Wei, Xinan Sheng, Zhihong Chen, Xieqiao Yan, Bixia Tang, Bin Lian, Xuan Wang, Li Zhou, Siming Li, Yan Kong, Zhonghui Qi, Huayan Xu, Rong Duan, Jun Guo, Lu Si
Software Mentions: 6
Published: over 5 years ago

10.1371/journal.pmed.1002730

Predicting survival from colorectal cancer histology slides using deep learning: A retrospective multicenter study
Cited by: 505
Author(s): Jakob Nikolas Kather, Johannes Krisam, Pornpimol Charoentong, Tom Luedde, Esther Herpel, Cleo Aron Weis, Timo Gaiser, Alexander Marx, Nektarios A. Valous, Dyke Ferber, Lina Jansen, Constantino Carlos Reyes-Aldasoro, Inka Zörnig, Dirk Jäger, Hermann Brenner, Jenny Chang‐Claude, Michael Hoffmeister, Niels Halama
Software Mentions: 6
Published: over 7 years ago

10.3389/fonc.2021.670218

KIF11 Serves as an Independent Prognostic Factor and Therapeutic Target for Patients With Lung Adenocarcinoma
Cited by: 13
Author(s): Zhaodong Li, Bin Yu, Fanghua Qi, Fan Li
Software Mentions: 6
Published: over 5 years ago

10.18632/oncotarget.20266

SLC2A2 (GLUT2) as a novel prognostic factor for hepatocellular carcinoma
Cited by: 58
Author(s): Yun Hak Kim, Dae Cheon Jeong, Kyoungjune Pak, Myoung‐Eun Han, Jiyoung Kim, Liangwen Liu, Hyun Jin Kim, Tae Woo Kim, Tae Hwa Kim, Dong Choon Hyun, Sae‐Ock Oh
Software Mentions: 6
Published: about 9 years ago

10.1186/s12885-020-07317-y

Endothelial activation and stress index (EASIX) is a reliable predictor for overall survival in patients with multiple myeloma
Cited by: 14
Author(s): Ga‐Young Song, Sung-Hoon Jung, Kihyun Kım, Seok Jin Kim, Sang Eun Yoon, Ho Sup Lee, Mi-Hee Kim, Seo‐Yeon Ahn, Jae‐Sook Ahn, Deok‐Hwan Yang, Hyeoung-Joon Kim, Je‐Jung Lee
Software Mentions: 6
Published: about 6 years ago

10.3389/fonc.2019.01569

The Impact of Surgery in IDH 1 Wild Type Glioblastoma in Relation With the MGMT Deregulation
Cited by: 13
Author(s): Francesco Marchi, Nora Sahnane, Roberta Cerutti, Debora Cipriani, Jessica Barizzi, Federico Mattia Stefanini, Samantha Epistolio, Michele Cerati, Sergio Balbi, Luca Mazzucchelli, Fausto Sessa, G. Pesce, Michael Reinert, Milo Frattini
Software Mentions: 6
Published: over 6 years ago

10.18632/oncotarget.24656

TP53 and OSBPL10 alterations in diffuse large B-cell lymphoma: prognostic markers identified via exome analysis of cases with extreme prognosis
Cited by: 10
Author(s): Akito Dobashi, Yosuke Togashi, Norio Tanaka, Masahiro Yokoyama, Naoko Tsuyama, Satoko Baba, Seiichi Mori, Kiyohiko Hatake, Toshiharu Yamaguchi, Tetsuo Noda, Kengo Takeuchi
Software Mentions: 6
Published: over 8 years ago

10.3389/fonc.2021.642563

A Novel Five-Gene Signature for Prognosis Prediction in Hepatocellular Carcinoma
Cited by: 14
Author(s): Lisa Su, Genhao Zhang, Xiangdong Kong
Software Mentions: 6
Published: over 5 years ago

10.3389/fonc.2020.580513

A Novel RNA Binding Protein-Related Prognostic Signature for Hepatocellular Carcinoma
Cited by: 25
Author(s): Yongbiao Huang, Sheng Chen, Qin Wan, Yali Wang, Long Li, Qianxia Li, Xianglin Yuan
Software Mentions: 6
Published: almost 6 years ago

10.1186/s13054-019-2701-5

Impact of acyclovir use on survival of patients with ventilator-associated pneumonia and high load herpes simplex virus replication
Cited by: 38
Author(s): Lukas Schuierer, Michael Gebhard, Hans-Georg Ruf, Ulrich Jaschinski, Thomas M. Berghaus, Michael Wittmann, Georg Braun, Dirk H. Busch, Reinhard Hoffmann
Software Mentions: 6
Published: almost 7 years ago

10.3390/jcm7090286

Pre-Procedural Statin Use Is Associated with Improved Long-Term Survival and Reduced Major Cardiovascular Events in Patients Undergoing Carotid Artery Stenting: A Retrospective Study
Cited by: 6
Author(s): GianLuca Colussi, Francesca Zuttion, Bruno Bais, Pierluigi Dolso, Mariarosaria Valente, Gian Luigi Gigli, Daniele Gasparini, Massimo Sponza, Cristiana Catena, Leonardo A. Sechi, Alessandro Cavarape
Software Mentions: 6
Published: about 8 years ago

10.7717/peerj.8827

Identification of a three-m6A related gene risk score model as a potential prognostic biomarker in clear cell renal cell carcinoma
Cited by: 21
Author(s): Yiqiao Zhao, Zijia Tao, Xiaonan Chen
Software Mentions: 6
Published: over 6 years ago

10.1186/s13048-020-00730-8

Identification of an autophagy-related gene signature for survival prediction in patients with cervical cancer
Cited by: 18
Author(s): Hengyu Chen, Qingchun Deng, Wenwen Wang, Huishan Tao, Ying Gao
Software Mentions: 6
Published: almost 6 years ago

10.1186/s12885-020-07724-1

Correction to: Comprehensive analysis of prognostic gene signatures based on immune infiltration of ovarian cancer
Cited by: 1
Author(s): Shi-Bai Yan, Jinling Fang, Yongcai Chen, Yong Xie, Siyou Zhang, Xiaohui Zhu, Fang Fěng
Software Mentions: 6
Published: almost 6 years ago

10.3389/fonc.2021.595099

A Correlation Study of Prognostic Risk Prediction for Colorectal Cancer Based on Autophagy Signature Genes
Cited by: 7
Author(s): Haibi Zhao, Chengzhi Huang, Yuqi Luo, Xiaoya Yao, Yong Hu, Muqing Wang, Xin Chen, Jun Zeng, Weixian Hu, Junjiang Wang, Rongjiang Li, Xueqing Yao
Software Mentions: 6
Published: over 5 years ago

10.1515/med-2019-0067

Prediction of recurrence-associated death from localized prostate cancer with a charlson comorbidity index–reinforced machine learning model
Cited by: 12
Author(s): Yi-Ting Lin, Michael Tian-Shyug Lee, Yen-Chun Huang, Chih-Kuang Liu, Yi-Tien Li, Mingchih Chen
Software Mentions: 6
Published: almost 8 years ago

10.3390/cancers13112776

Evaluation of Somatic Mutations in Solid Metastatic Pan-Cancer Patients
Cited by: 8
Author(s): Moom R. Roosan, Isa Mambetsariev, Rebecca Pharaon, Jeremy Fricke, Angel Ray Baroz, Joseph Chao, Chen Chen, Mohd W. Nasser, Ramakanth Chirravuri-Venkata, Maneesh Jain, Lynette M. Smith, Susan E. Yost, Karen L. Reckamp, Raju Pillai, Leonidas Arvanitis, Michelle Afkhami, Edward W. Wang, Vincent Chung, Mihaela Cristea, Marwan Fakih, Marianna Koczywas, Erminia Massarelli, Joanne Mortimer, Yuan Yuan, Surinder K. Batra, Sumanta K. Pal, Ravi Salgia
Software Mentions: 6
Published: over 5 years ago

10.3390/ani11072144

Personality and Cognitive Profiles of Animal-Assisted Intervention Dogs and Pet Dogs in an Unsolvable Task
Cited by: 1
Author(s): Patrizia Piotti, M. Albertini, Lidia Pia Trabucco, Lucia Ripari, Christos Karagiannis, Claudio Bandi, Federica Pirrone
Software Mentions: 6
Published: over 5 years ago

10.7717/peerj.2582

Performance of joint modelling of time-to-event data with time-dependent predictors: an assessment based on transition to psychosis data
Cited by: 24
Author(s): Hok Pan Yuen, Andrew Mackinnon
Software Mentions: 5
Published: about 10 years ago

10.1186/s12889-017-4590-3

Smoking-related general and cause-specific mortality in Estonia
Cited by: 15
Author(s): Gea Kõks, Krista Fischer, Sulev Kõks
Software Mentions: 5
Published: over 9 years ago

10.3389/fonc.2020.566183

Comprehensive Analysis of CDCAs Methylation and Immune Infiltrates in Hepatocellular Carcinoma
Cited by: 8
Author(s): Yongkang Wang, Yinfeng Yang, Honglei Gao, Ting Ouyang, Luyao Zhang, Jili Hu, Hu Sheng, Hongxing Kan
Software Mentions: 5
Published: over 5 years ago

10.3389/fonc.2021.641385

Prognostic Value of an Immunohistochemical Signature in Patients With Bladder Cancer Undergoing Radical Cystectomy
Cited by: 1
Author(s): Jie Wu, Junmiao Wen, Yu-Chen Wang, Wenjie Luo, Qifeng Wang, Hong Liu, Bo Dai, Dingwei Ye, Hengchuan Su, Yiping Zhu
Software Mentions: 5
Published: over 5 years ago

10.1186/s13071-019-3351-9

In vivo fluorescent cercariae reveal the entry portals of Cardiocephaloides longicollis (Rudolphi, 1819) Dubois, 1982 (Strigeidae) into the gilthead seabream Sparus aurata L.
Cited by: 4
Author(s): Gabrielle S. van Beest, Mar Villar-Torres, Juan Antonio Raga, Francisco E. Montero, Ana Born-Torrijos
Software Mentions: 5
Published: over 7 years ago

10.1155/2019/3865279

Bioinformatic Analysis Reveals an Immune/Inflammatory-Related Risk Signature for Oral Cavity Squamous Cell Carcinoma
Cited by: 4
Author(s): Shan Bai, Ying-Bin Yan, Wei Chen, Ping Zhang, Tong-Mei Zhang, Yuanyuan Tian, Hao Liu
Software Mentions: 5
Published: almost 7 years ago

10.1155/2021/8052752

Overall Survival Analyses following Adjuvant Chemotherapy or Nonadjuvant Chemotherapy in Patients with Stage IB Non-Small-Cell Lung Cancer
Cited by: 6
Author(s): Zegui Tu, Tian Tian, Qian Chen, Caili Li
Software Mentions: 5
Published: over 5 years ago

10.2196/27633

Web-Based Survival Analysis Tool Tailored for Medical Research (KMplot): Development and Implementation
Cited by: 716
Author(s): András Lánczky, Balázs Győrffy
Software Mentions: 5
Published: about 5 years ago

10.3390/ijms21207720

A Bioinformatic Pipeline Places STAT5A as a miR-650 Target in Poorly Differentiated Aggressive Breast Cancer
Cited by: 1
Author(s): Eric López-Huerta, Ezequiel M. Fuentes‐Pananá
Software Mentions: 5
Published: about 6 years ago

10.1016/j.ctro.2020.04.004

[18F]-HX4 PET/CT hypoxia in patients with squamous cell carcinoma of the head and neck treated with chemoradiotherapy: Prognostic results from two prospective trials
Cited by: 12
Author(s): Sebastian Sanduleanu, Olga Hamming‐Vrieze, Frederik Wesseling, Aniek J.G. Even, Frank Hoebers, Ann Hoeben, Wouter V. Vogel, Margot E.T. Tesselaar, Daniel Parvin, Harry Bartelink, Philippe Lambin
Software Mentions: 5
Published: over 6 years ago

10.1186/1756-3305-7-249

Individual experience affects host choice in malaria vector mosquitoes
Cited by: 21
Author(s): Amélie Vantaux, Thierry Léfèvre, Roch K. Dabiré, Anna Cohuet
Software Mentions: 5
Published: almost 13 years ago

10.1186/s12885-020-07493-x

Identification of ALDH3A2 as a novel prognostic biomarker in gastric adenocarcinoma using integrated bioinformatics analysis
Cited by: 24
Author(s): Zhenhua Yin, Danni Wu, Jianping Shi, Xiao‐Hong Wei, Nuyun Jin, Xiaolan Lu, Xiaohan Ren
Software Mentions: 5
Published: almost 6 years ago

10.1186/s12974-019-1454-z

Balance between innate versus adaptive immune system and the risk of dementia: a population-based cohort study
Cited by: 46
Author(s): Kimberly D. van der Willik, Lana Fani, Dimitris Rizopoulos, Silvan Licher, Jesse Fest, Sanne B. Schagen, Mohammad Kamran Ikram, M. Arfan Ikram
Software Mentions: 5
Published: over 7 years ago

10.1017/S003118201400050X

A longitudinal assessment of the serological response toTheileria parvaand other tick-borne parasites from birth to one year in a cohort of indigenous calves in western Kenya
Cited by: 17
Author(s): Henry K. Kiara, Amy Jennings, Barend M. deC. Bronsvoort, Ian Handel, Samuel M. Thumbi, Mary Mbole-Kariuki, Ilana Conradie van Wyk, Elizabeth J. Poole, Olivier Hanotte, Jacobus A.W. Coetzer, Mark Woolhouse, Philip G. Toye
Software Mentions: 5
Published: over 12 years ago

10.3390/ijms21010145

Gene Copy Number and Post-Transductional Mechanisms Regulate TRAP1 Expression in Human Colorectal Carcinomas
Cited by: 3
Author(s): Michele Pietrafesa, Francesca Maddalena, Luciana Possidente, Valentina Condelli, Pietro Zoppoli, Valeria Li Bergolis, Maria Grazia Rodriquenz, Michele Aieta, Giulia Vita, Franca Esposito, Matteo Landriscina
Software Mentions: 5
Published: almost 7 years ago

10.3390/ijms21165894

Downregulation of ORP3 Correlates with Reduced Survival of Colon Cancer Patients with Advanced Nodal Metastasis and of Female Patients with Grade 3 Colon Cancer
Cited by: 9
Author(s): Pengfei Xu, Julia Richter, Annette Blatz, Fabian Gärtner, R. Alberts, Anca Azoitei, Wycliffe Arika Makori, Sabine Meessen, Uwe Knippschild, Çagatay Güneş
Software Mentions: 5
Published: about 6 years ago

10.1155/2020/3264079

Nomogram for Predicting Long-Term Survival after Synchronous Resection for Hepatocellular Carcinoma and Inferior Vena Cava Tumor Thrombosis: A Multicenter Retrospective Study
Cited by: 6
Author(s): Yan Bai, Jiayi Wu, Yong Zeng, Jie Chen, Shuangjia Wang, Shi Chen, Funan Qiu, Songqiang Zhou, San–Lin You, Yuan Tian, Yaodong Wang, Mao-Lin Yan
Software Mentions: 5
Published: over 6 years ago

10.7554/eLife.50243

Estimating effectiveness of case-area targeted response interventions against cholera in Haiti
Cited by: 22
Author(s): Edwige Michel, Jean Gaudart, Samuel Beaulieu, Gregory Bulit, Martine Piarroux, Jacques Boncy, Patrick Dély, Renaud Piarroux, Stanislas Rebaudet
Software Mentions: 5
Published: almost 7 years ago

10.1186/s40462-020-00223-9

Behavioral modifications by a large-northern herbivore to mitigate warming conditions
Cited by: 7
Author(s): Jyoti S. Jennewein, Mark Hebblewhite, Peter J. Mahoney, Sophie L. Gilbert, Arjan J. H. Meddens, Natalie T. Boelman, Kyle Joly, Kimberly Jones, Kalin A. Kellie, Scott M. Brainerd, Lee A. Vierling, Jan U. H. Eitel
Software Mentions: 5
Published: about 6 years ago

10.1038/s41380-019-0442-0

Familial risk and heritability of diagnosed borderline personality disorder: a register study of the Swedish population
Cited by: 24
Author(s): Charlotte Skoglund, Annika Tiger, Christian Rück, Predrag Petrović, Philip Asherson, Clara Hellner, David Mataix‐Cols, Ralf Kuja‐Halkola
Software Mentions: 5
Published: over 7 years ago

10.1002/ctm2.30

Development and external validation of a predictive scoring system associated with metastasis of T1‐2 colorectal tumors to lymph nodes
Cited by: 15
Author(s): Shaobo Mo, Zheng Zhou, Weixing Dai, Wenqiang Xiang, Lingyu Han, Long Zhang, Renjie Wang, Sanjun Cai, Qingguo Li, Guoxiang Cai
Software Mentions: 5
Published: over 6 years ago

10.1002/1878-0261.12654

Programmed death‐ligand 1 gene expression is a prognostic marker in early breast cancer and provides additional prognostic value to 21‐gene and 70‐gene signatures in estrogen receptor‐positive disease
Cited by: 18
Author(s): Ioannis Zerdes, Emmanouil G. Sifakis, Alexios Matikas, Sebastian Chrétien, Nicholas P. Tobin, Johan Hartman, George Z. Rassidakis, Jonas Bergh, Theodoros Foukakis
Software Mentions: 5
Published: over 6 years ago

10.1002/1878-0261.12803

Expression of HGF, pMet, and pAkt is related to benefit of radiotherapy after breast‐conserving surgery: a long‐term follow‐up of the SweBCG91‐RT randomised trial
Cited by: 2
Author(s): Martin Sjöström, Cynthia Veenstra, Erik Holmberg, Per Karlsson, Fredrika Killander, Per Uno Malmström, Emma Niméus, Mårten Fernö, Olle Stål
Software Mentions: 5
Published: about 6 years ago

10.1093/infdis/jiy591

Transmission and Age Impact the Risk of Developing Febrile Malaria in Children with Asymptomatic Plasmodium falciparum Parasitemia
Cited by: 18
Author(s): Kevin Wamae, Juliana Wambua, George Nyangweso, Gabriel Mwambingu, Faith Osier, Francis M. Ndungu, Philip Bejon, Lynette Isabella Ochola‐Oyier
Software Mentions: 5
Published: about 8 years ago

10.7554/eLife.36967

Topography of cancer-associated immune cells in human solid tumors
Cited by: 187
Author(s): Jakob Nikolas Kather, Meggy Suarez-Carmona, Pornpimol Charoentong, Cleo–Aron Weis, Daniela Hirsch, Peter Bankhead, Marcel Horning, Dyke Ferber, Ivan Kel, Esther Herpel, Sarah Schott, Inka Zörnig, Jochen Utikal, Alexander Marx, Timo Gaiser, Hermann Brenner, Jenny Chang‐Claude, Michael Hoffmeister, Dirk Jäger, Niels Halama
Software Mentions: 5
Published: about 8 years ago

10.1186/s10020-020-00185-z

The significance of m6A RNA methylation regulators in predicting the prognosis and clinical course of HBV-related hepatocellular carcinoma
Cited by: 33
Author(s): Qiongxuan Fang, Hongsong Chen
Software Mentions: 5
Published: over 6 years ago

10.1186/s12882-019-1382-2

Factors influencing survival time of hemodialysis patients; time to event analysis using parametric models: a cohort study
Cited by: 13
Author(s): Vahid Ebrahimi, Mohammad Hossein Khademian, Seyed Jalil Masoumi, Mohammad Reza Morvaridi, Shahrokh Ezzatzadegan Jahromi
Software Mentions: 5
Published: over 7 years ago

10.1016/j.clon.2019.08.008

Time to Surgery Following Short-Course Radiotherapy in Rectal Cancer and its Impact on Postoperative Outcomes. A Population-Based Study Across the English National Health Service, 2009–2014
Cited by: 7
Author(s): Bethany Levick, Alexandra Gilbert, Katie Spencer, Amy Downing, John Taylor, P. J. Finan, David Sebag‐Montefiore, Eva Morris
Software Mentions: 5
Published: over 6 years ago

10.1186/s12943-017-0653-4

Human germ/stem cell-specific gene TEX19 influences cancer cell proliferation and cancer prognosis
Cited by: 18
Author(s): Vicente Planells-Palop, Ali Hazazi, Julia Feichtinger, Jana Jezkova, Gerhard G. Thallinger, Naif Alsiwiehri, Mikhlid H. Almutairi, Lee Parry, Jane A. Wakeman, Ramsay J. McFarlane
Software Mentions: 5
Published: over 9 years ago

10.1186/s12859-018-2204-4

polyClustR: defining communities of reconciled cancer subtypes with biological and prognostic significance
Cited by: 1
Author(s): Katherine Eason, Gift Nyamundanda, Anguraj Sadanandam
Software Mentions: 5
Published: over 8 years ago

10.3389/fonc.2020.01119

Identification of RNA: 5-Methylcytosine Methyltransferases-Related Signature for Predicting Prognosis in Glioma
Cited by: 23
Author(s): Peng Wang, Minxian Wu, Zewei Tu, Chuming Tao, Qing Hu, Kuangxun Li, Xingen Zhu, Kai Huang
Software Mentions: 5
Published: about 6 years ago

10.1002/advs.201801254

Detection of CTC Clusters and a Dedifferentiated RNA‐Expression Survival Signature in Prostate Cancer
Cited by: 28
Author(s): Molly Kozminsky, Shamileh Fouladdel, Jin Hoon Chung, Yugang Wang, David C. Smith, Ajjai Alva, Ebrahim Azizi, Todd M. Morgan, Sunitha Nagrath
Software Mentions: 5
Published: almost 8 years ago

10.1155/2020/3761535

Clinical and Survival Impact of Sex-Determining Region Y-Box 2 in Colorectal Cancer: An Integrated Analysis of the Immunohistochemical Study and Bioinformatics Analysis
Cited by: 4
Author(s): Kun Song, Jingduo Hao, Zuyin Ge, Pushi Chen
Software Mentions: 5
Published: over 6 years ago

10.1186/s12859-021-04050-6

Dualmarker: a flexible toolset for exploratory analysis of combinatorial dual biomarkers for clinical efficacy
Cited by: 4
Author(s): Xiaopeng Ma, Ruiqi Huang, Xikun Wu, Pei Zhang
Software Mentions: 5
Published: over 5 years ago

10.1186/1471-2288-11-129

Imputation of missing values of tumour stage in population-based cancer registration
Cited by: 81
Author(s): Nora Eisemann, Annika Waldmann, Alexander Katalinic
Software Mentions: 5
Published: about 15 years ago

10.1038/s41598-018-20471-5

Development of an Immune-Pathology Informed Radiomics Model for Non-Small Cell Lung Cancer
Cited by: 104
Author(s): Chad Tang, Brian P. Hobbs, Ahmed M. Amer, Li Xiao, Carmen Behrens, Jaime Rodriguez Canales, Edwin Parra Cuentas, Pamela Villalobos, David Fried, Joe Y. Chang, David S. Hong, James Welsh, Boris Sepesi, Laurence Edward Court, Ignacio I. Wistuba, Eugene J. Koay
Software Mentions: 5
Published: over 8 years ago

10.1186/s12859-020-03633-z

PDXGEM: patient-derived tumor xenograft-based gene expression model for predicting clinical response to anticancer therapy in cancer patients
Cited by: 10
Author(s): Young‐Chul Kim, Daewon Kim, Biwei Cao, Rodrigo Carvajal, Minjung Kim
Software Mentions: 5
Published: over 6 years ago

10.1038/s41598-017-03841-3

Experimental evidence for reciprocity in allogrooming among wild-type Norway rats
Cited by: 37
Author(s): Manon K. Schweinfurth, Binia Stieger, Michael Taborsky
Software Mentions: 5
Published: over 9 years ago

10.1186/s12936-021-03677-3

Fitness characteristics of the malaria vector Anopheles funestus during an attempted laboratory colonization
Cited by: 22
Author(s): Halfan S. Ngowo, Emmanuel E. Hape, Jason Matthiopoulos, Heather M. Ferguson, Fredros O. Okumu
Software Mentions: 5
Published: over 5 years ago

10.1155/2020/9548632

Identification of Prognostic Immune-Related Genes by Integrating mRNA Expression and Methylation in Lung Adenocarcinoma
Cited by: 3
Author(s): Jie Zhu, Min Wang, Daixing Hu
Software Mentions: 5
Published: over 6 years ago

10.1186/s41016-021-00235-3

The increasing expression of GPX7 related to the malignant clinical features leading to poor prognosis of glioma patients
Cited by: 5
Author(s): Jiawei Yao, Xin Chen, Zhendong Liu, Ruotian Zhang, Cheng Zhang, Quan Yang, Penglei Yao, Qiuyi Jiang, Jianing Wu, Shen Zhao
Software Mentions: 5
Published: over 5 years ago

10.1038/srep26569

The significance of droughts for hyporheic dwellers: evidence from freshwater crayfish
Cited by: 53
Author(s): Antonín Kouba, Jan Tíkal, Petr Císař, Lukáš Veselý, Martin Fořt, Josef Příborský, Jiří Patoka, Miloš Buřič
Software Mentions: 5
Published: over 10 years ago

10.26508/lsa.201800171

LATS1 and LATS2 suppress breast cancer progression by maintaining cell identity and metabolic state
Cited by: 24
Author(s): Noa Furth, Ioannis S. Pateras, Ron Rotkopf, Vassiliki Vlachou, Irina Rivkin, Ina Schmitt, Deborah Bakaev, Anat Gershoni, Elena Ainbinder, Dena Leshkowitz, Randy L. Johnson, Vassilis G. Gorgoulis, Moshe Oren, Yael Aylon
Software Mentions: 5
Published: about 8 years ago

10.26508/lsa.202101036

Hepatitis B virus compartmentalization and single-cell differentiation in hepatocellular carcinoma
Cited by: 2
Author(s): Frank Jühling, Antonio Saviano, Clara Ponsolles, Laura Heydmann, Émilie Crouchet, Sarah Durand, Houssein El Saghire, Emanuele Felli, Véronique Lindner, Patrick Pessaux, Nathalie Pochet, Catherine Schuster, Éloi R. Verrier, Thomas F. Baumert
Software Mentions: 5
Published: over 5 years ago

10.3390/cells9030622

The G Protein-Coupled Estrogen Receptor (GPER) Expression Correlates with Pro-Metastatic Pathways in ER-Negative Breast Cancer: A Bioinformatics Analysis
Cited by: 26
Author(s): Marianna Talia, Ernestina Marianna De Francesco, Damiano Cosimo Rigiracciolo, Maria Grazia Muoio, Lucia Muglia, Marcello Maggiolini, Andrew H. Sims
Software Mentions: 5
Published: over 6 years ago

10.3389/fonc.2020.607622

Identification and Verification of Immune-Related Gene Prognostic Signature Based on ssGSEA for Osteosarcoma
Cited by: 96
Author(s): Bo Xiao, Liyan Liu, Aoyu Li, Xiang Cheng, Pingxiao Wang, Hui Li, Tao Xiao
Software Mentions: 5
Published: almost 6 years ago

10.1038/s41598-017-00665-z

Delta-radiomics features for the prediction of patient outcomes in non–small cell lung cancer
Cited by: 238
Author(s): Xenia Fave, Lifei Zhang, Jinzhong Yang, D. Mackin, Peter A Balter, Daniel R. Gomez, David S Followill, A. Kyle Jones, Francesco C. Stingo, Zhongxing Liao, Radhe Mohan, Laurence Edward Court
Software Mentions: 5
Published: over 9 years ago

10.1186/s13014-017-0863-3

Intensity-modulated versus 3-dimensional conformal radiotherapy in the definitive treatment of esophageal cancer: comparison of outcomes and acute toxicity
Cited by: 24
Author(s): Matthias F. Haefner, Kristin Lang, Vivek Verma, Stefan A. Koerber, Lorenz Uhlmann, Jürgen Debus, Florian Sterzing
Software Mentions: 5
Published: about 9 years ago

10.1038/leu.2017.179

Prediction of outcome in newly diagnosed myeloma: a meta-analysis of the molecular profiles of 1905 trial patients
Cited by: 164
Author(s): Vallari Shah, Amy L. Sherborne, Brian A. Walker, David C. Johnson, Eileen M. Boyle, Sidra Ellis, Dil Begum, Paula Proszek, J. Jones, Charlotte Pawlyn, Suvi Savola, Matthew Jenner, Mark T. Drayson, Roger G. Owen, Richard S. Houlston, David A. Cairns, Walter M. Gregory, Gordon Cook, Faith E. Davies, Graham Jackson, Gareth J. Morgan, Martin Kaiser
Software Mentions: 5
Published: over 9 years ago

10.1186/s13014-021-01810-9

Impact of feature selection methods and subgroup factors on prognostic analysis with CT-based radiomics in non-small cell lung cancer patients
Cited by: 15
Author(s): Yuto Sugai, Noriyuki Kadoya, Shohei Tanaka, Shunpei Tanabe, Mariko Umeda, Takaya Yamamoto, Kazuya Takeda, Suguru Dobashi, Haruna Ohashi, Ken Takeda, Keiichi Jingu
Software Mentions: 5
Published: over 5 years ago

10.1186/s12920-021-00928-9

Profiles of immune cell infiltration and immune-related genes in the tumor microenvironment of esophageal squamous cell carcinoma
Cited by: 8
Author(s): Mingdi Liu, Faping Li, Bin Liu, Yong‐Ping Jian, Dan Zhang, Honglan Zhou, Yishu Wang, Zhixiang Xu
Software Mentions: 5
Published: over 5 years ago

10.1186/s12920-019-0530-7

Novel secretome-to-transcriptome integrated or secreto-transcriptomic approach to reveal liquid biopsy biomarkers for predicting individualized prognosis of breast cancer patients
Cited by: 11
Author(s): John A. Ankney, Ling Xie, John A. Wrobel, Li Wang, Xian Chen
Software Mentions: 5
Published: over 7 years ago

10.3389/fonc.2021.683951

The Epithelial to Mesenchymal Transition Related Gene Calumenin Is an Adverse Prognostic Factor of Bladder Cancer Correlated With Tumor Microenvironment Remodeling, Gene Mutation, and Ferroptosis
Cited by: 14
Author(s): Yueyao Du, WenHao Miao, Xiang Jiang, Jin Cao, Bo Wang, Yi Wang, Jian Yu, XiZhi Wang, Haitao Liu
Software Mentions: 5
Published: over 5 years ago

10.3389/fonc.2020.553045

m6A Reader HNRNPA2B1 Promotes Esophageal Cancer Progression via Up-Regulation of ACLY and ACC1
Cited by: 62
Author(s): Huimin Guo, Bei Wang, Kaiyue Xu, Ling Nie, Yao Fu, Zhangding Wang, Qiang Wang, Shouyu Wang, Xiaoping Zou
Software Mentions: 5
Published: about 6 years ago

10.1590/S1518-8787.2017051006766

Patient survival and risk of death after prostate cancer treatment in the Brazilian Unified Health System
Cited by: 2
Author(s): Sônia Faria Mendes Braga, Mírian Carvalho de Souza, Raphael Romie de Oliveira, Eli Iôla Gurgel Andrade, Francisco de Assis Acúrcio, Mariângela Leal Cherchiglia
Software Mentions: 5
Published: almost 10 years ago

10.1155/2020/9493256

Identification of CPT1A as a Prognostic Biomarker and Potential Therapeutic Target for Kidney Renal Clear Cell Carcinoma and Establishment of a Risk Signature of CPT1A-Related Genes
Cited by: 5
Author(s): Yingkun Xu, Guangzhen Wu, Xue Ma, Jianyi Li, Ningke Ruan, Zhe Zhang, Yalei Cao, Yougen Chen, Qi Zhang, Qinghua Xia
Software Mentions: 5
Published: almost 7 years ago

10.18632/aging.202582

Pan-cancer investigation reveals mechanistic insights of planar cell polarity gene Fuz in carcinogenesis
Cited by: 5
Author(s): Zhefan Stephen Chen, Xiao Lin, Ting-Fung Chan, Ho Yin Chan
Software Mentions: 5
Published: over 5 years ago

10.1002/cam4.4054

Identification of a novel six‐gene signature with potential prognostic and therapeutic value in cervical cancer
Cited by: 11
Author(s): Xinyu Qu, Zhiwen Shi, Jingjing Guo, Chenyan Guo, Junjun Qiu, Keqin Hua
Software Mentions: 5
Published: about 5 years ago

10.1002/cam4.3353

Construction of a lipid metabolism‐related and immune‐associated prognostic signature for hepatocellular carcinoma
Cited by: 37
Author(s): Bo Hu, Xiaobo Yang, Xinting Sang
Software Mentions: 5
Published: about 6 years ago

10.1002/cam4.4151

Development and validation of prognostic nomogram in ependymoma: A retrospective analysis of the SEER database
Cited by: 9
Author(s): Zetian Jia, Yaqi Yan, Jiuxin Wang, He Yang, Haihua Zhan, Qian Chen, Yawei He, Changyu Huang, Yuhua Hu
Software Mentions: 5
Published: about 5 years ago

10.1245/s10434-020-08219-w

Factors That Influence Conversion to Resectability and Survival After Resection of Metastases in RAS WT Metastatic Colorectal Cancer (mCRC): Analysis of FIRE-3- AIOKRK0306
Cited by: 14
Author(s): Dominik Paul Modest, Volker Heinemann, Gunnar Folprecht, Timm Denecke, Johann Pratschke, Hauke Lang, M. H. A. Bemelmans, Thomas Becker, Markus Rentsch, Daniel Seehofer, Christiane Bruns, Bernhard Gebauer, Swantje Held, Arndt Stahler, Kathrin Heinrich, Jobst C. von Einem, Sebastian Stintzing, Ulf Neumann, Ingrid Ricard
Software Mentions: 5
Published: over 6 years ago

10.1002/cam4.2632

Serial ultra‐deep sequencing of circulating tumor DNA reveals the clonal evolution in non‐small cell lung cancer patients treated with anti‐PD1 immunotherapy
Cited by: 27
Author(s): Li Li, Yübo Wang, Weiwei Shi, Mengxiao Zhu, Zhulin Liu, Nuo Luo, Yanwu Zeng, Yong He
Software Mentions: 5
Published: almost 7 years ago

10.1186/s12916-014-0120-7

The association between the ratio of monocytes:lymphocytes at age 3 months and risk of tuberculosis (TB) in the first two years of life
Cited by: 74
Author(s): Vivek Naranbhai, Soyeon Kim, Helen A. Fletcher, Mark F. Cotton, Avy Violari, Charles D. Mitchell, Sharon Nachman, George McSherry, Helen McShane, Adrian V. S. Hill, Shabir А. Madhi
Software Mentions: 5
Published: over 12 years ago

10.1186/s13148-021-01035-3

Epigenetic age acceleration is associated with cardiometabolic risk factors and clinical cardiovascular disease risk scores in African Americans
Cited by: 29
Author(s): Farah Ammous, Wei Zhao, Scott Ratliff, Thomas H. Mosley, Lawrence F. Bielak, Xiang Zhou, Patricia A. Peyser, Sharon L.R. Kardia, Jennifer A. Smith
Software Mentions: 5
Published: over 5 years ago

10.18632/aging.102665

Prognostic potential of PRPF3 in hepatocellular carcinoma
Cited by: 27
Author(s): Yinlan Liu, Yuhan Yang, Yan Luo, Juan Wang, Xiangyun Lu, Zongxing Yang, Jin Yang
Software Mentions: 5
Published: almost 7 years ago

10.1002/cam4.4139

Clinical outcomes of stereotactic magnetic resonance image‐guided adaptive radiotherapy for primary and metastatic tumors in the abdomen and pelvis
Cited by: 14
Author(s): Sangpil Yoon, Elaine Luterstein, Fang Chu, Minsong Cao, James Lamb, Nzhde Agazaryan, Daniel A. Low, A. Raldow, Michael L. Steinberg, Percy Lee
Software Mentions: 5
Published: over 5 years ago

Projects: cran: survival

Enhanced Analysis

Science Score: 100/100

Bonuses:

Papers Mentioning survival 1,690