cran: survival | Projects | Ecosyste.ms: Papers

10.3389/fonc.2021.706915

A Novel Nine-lncRNA Risk Signature Correlates With Immunotherapy in Hepatocellular Carcinoma
Cited by: 8
Author(s): Ye Nie, Jianhui Li, Wenlong Wu, Dongnan Guo, Xinjun Lei, Tianchen Zhang, Yanfang Wang, Zhenzhen Mao, Xuan Zhang, Wenjie Song
Software Mentions: 8
Published: almost 5 years ago

10.1002/cam4.4035

The prognostic value of sarcopenia combined with preoperative fibrinogen–albumin ratio in patients with intrahepatic cholangiocarcinoma after surgery: A multicenter, prospective study
Cited by: 10
Author(s): Haitao Yu, Mingxun Wang, Yi Wang, Jinhuan Yang, Liming Deng, Wenming Bao, Bangjie He, Lin Zou, Zi-Yan Chen, Kaiyu Chen, Baofu Zhang, Fangting Liu, Zhengping Yu, Long‐Yun Ye, Bin Jin, Gang Chen
Software Mentions: 8
Published: over 5 years ago

10.18632/oncotarget.22462

Transient paraproteinemia after allogeneic hematopoietic stem cell transplantation is an underexplored phenomenon associated with graft versus host disease
Cited by: 10
Author(s): Corinne C. Widmer, Stefan Balabanov, Urs Schanz, Alexandre Theocharides
Software Mentions: 8
Published: almost 9 years ago

10.3389/fonc.2021.633995

A Nomogram for Predicting Multiple Metastases in Metastatic Colorectal Cancer Patients: A Large Population-Based Study
Cited by: 7
Author(s): Yuhang Ge, Renshen Xiang, Jun Ren, Wei Song, Wei Lu, Tao Fu
Software Mentions: 8
Published: over 5 years ago

10.3390/biomedicines9091253

Alterations in Circulating Monocytes Predict COVID-19 Severity and Include Chromatin Modifications Still Detectable Six Months after Recovery
Cited by: 24
Author(s): Alberto Utrero‐Rico, Cecilia González-Cuadrado, Marta Chivite-Lacaba, Óscar Cabrera-Marante, Rocío Laguna‐Goya, Patricia Almendro-Vázquez, Carmen Díaz-Pedroche, María Ruiz-Ruigómez, Antonio Lalueza, María Dolores Folgueira, Enrique Vázquez, Ana Quintas, Marcos J. Berges-Buxeda, Moisés Martín-Rodriguez, Ana Dopazo, Antonio Serrano-Hernández, Estela Paz‐Artal, Estela Paz‐Artal
Software Mentions: 8
Published: almost 5 years ago

10.3389/fgene.2021.627508

Integrated Analysis of the Prognosis-Associated RNA-Binding Protein Genes and Candidate Drugs in Renal Papillary Cell Carcinoma
Cited by: 22
Author(s): Shuiping Jiang, Xiaohan Ren, Shouyong Liu, Zhongwen Lü, Aiming Xu, Chao Qin, Zengjun Wang
Software Mentions: 8
Published: over 5 years ago

10.18632/aging.203266

Clinical significance and prognostic role of an immune-related gene signature in gastric adenocarcinoma
Cited by: 4
Author(s): Rui Mao, Kehao Liu, Nana Zhao, Pengsen Guo, Yingxin Wu, Zheng Wang, Yanjun Liu, Tongtong Zhang
Software Mentions: 8
Published: about 5 years ago

10.1038/srep42719

A pan-cancer analysis of secreted Frizzled-related proteins: re-examining their proposed tumour suppressive function
Cited by: 37
Author(s): Krista Vincent, Lynne-Marie Postovit
Software Mentions: 8
Published: over 9 years ago

10.1186/s13293-020-00296-6

Sex-specific clustering of metabolic risk factors and cancer risk: a longitudinal study in Iran
Cited by: 2
Author(s): Azra Ramezankhani, Fereidoun Azizi, Farzad Hadaegh
Software Mentions: 8
Published: over 6 years ago

10.1371/journal.pone.0076507

North Atlantic Blue and Fin Whales Suspend Their Spring Migration to Forage in Middle Latitudes: Building up Energy Reserves for the Journey?
Cited by: 120
Author(s): Mónica Silva, Rui Prieto, Ian D. Jonsen, Mark F. Baumgartner, Ricardo S. Santos
Software Mentions: 8
Published: almost 13 years ago

10.7150/ijms.47073

A Novel Nomogram Predicting Distant Metastasis in T1 and T2 Gallbladder Cancer: A SEER-based Study
Cited by: 10
Author(s): Yulong Cai, Yixin Lin, Lingjun Jiang, Hui Ye, Fuyu Li, Nan‐Sheng Cheng
Software Mentions: 8
Published: over 6 years ago

10.3389/fendo.2020.561370

Adropin Stimulates Proliferation and Inhibits Adrenocortical Steroidogenesis in the Human Adrenal Carcinoma (HAC15) Cell Line
Cited by: 14
Author(s): Ewelina Stelcer, Paulina Milecka, Hanna Komarowska, Karol Jopek, Marianna Tyczewska, Marta Szyszka, Marta Leśniczak, Wiktoria Suchorska, Karlygash Bekova, Beata Szczepaniak, Marek Ruchała, Marek Karczewski, T Wierzbicki, Witold Szaflarski, Ludwik K. Malendowicz, Marcin Ruciński
Software Mentions: 8
Published: almost 6 years ago

10.3389/fsurg.2021.590448

Intravesical Recurrence After Radical Nephroureterectomy of Upper Urinary Tract Urothelial Carcinoma: A Large Population-Based Investigation of Clinicopathologic Characteristics and Survival Outcomes
Cited by: 6
Author(s): Jie Wu, Peihang Xu, Wenjie Luo, Bo Dai, Yijun Shen, Dingwei Ye, Yu-Chen Wang, Yiping Zhu
Software Mentions: 8
Published: over 5 years ago

10.1136/openhrt-2020-001459

CHARGE-AF in a national routine primary care electronic health records database in the Netherlands: validation for 5-year risk of atrial fibrillation and implications for patient selection in atrial fibrillation screening
Cited by: 26
Author(s): Jelle C L Himmelreich, Wim A M Lucassen, Ralf E. Harskamp, Claire Aussems, Henk van Weert, M. Nielen
Software Mentions: 8
Published: over 5 years ago

10.1002/cam4.1813

Long noncoding RNAs predict the survival of patients with colorectal cancer as revealed by constructing an endogenous RNA network using bioinformation analysis
Cited by: 24
Author(s): Hui Zhang, Zhuo Wang, Jianzhong Wu, Rong Ma, Jifeng Feng
Software Mentions: 8
Published: over 7 years ago

10.1002/cam4.2925

Postoperative adjuvant therapy following radical resection for intrahepatic cholangiocarcinoma: A multicenter retrospective study
Cited by: 14
Author(s): Lei Wang, Manjun Deng, Jianying Lou, Shi Zheng, Xinyu Bi, Jianming Wang, Wei Guo, Fuyu Li, Jian Wang, Yang Zheng, Jingdong Li, Sheue-yann Cheng, Weiping Zhou, Yongyi Zeng
Software Mentions: 8
Published: over 6 years ago

10.3390/cells8101161

An Efficient and Flexible Method for Deconvoluting Bulk RNA-Seq Data with Single-Cell RNA-Seq Data
Cited by: 15
Author(s): Xifang Sun, Shuang Sun, Sheng Yang
Software Mentions: 8
Published: almost 7 years ago

10.3389/fgene.2020.00805

Prognostic lncRNA, miRNA, and mRNA Signatures in Papillary Thyroid Carcinoma
Cited by: 8
Author(s): Kun Wang, Jing Xu, Lu Zhao, Shiyang Liu, Chen‐Guang Liu, Lin Zhang
Software Mentions: 8
Published: about 6 years ago

10.1038/s41598-020-61643-6

Whole genome analysis identifies the association of TP53 genomic deletions with lower survival in Stage III colorectal cancer
Cited by: 7
Author(s): Xia Li, Paul Van Hummelen, Matthew Kubit, Ho‐Joon Lee, John Bell, Susan M. Grimes, Christina Wood-Bouwens, Stephanie Greer, Tyler Barker, Derrick S. Haslem, James M. Ford, Gail Fulde, Hanlee P. Ji, Lincoln Nadauld
Software Mentions: 8
Published: over 6 years ago

10.3390/cancers13184656

The Evolution and Prognostic Role of Tumour-Infiltrating Lymphocytes and Peripheral Blood-Based Biomarkers in Inflammatory Breast Cancer Patients Treated with Neoadjuvant Chemotherapy
Cited by: 7
Author(s): Christophe Van Berckelaer, Iris Vermeiren, Leonie Vercauteren, Charlotte Rypens, Gizem Öner, Xuan Bich Trinh, Wiebren A.A. Tjalma, Glenn Broeckx, Emmanuelle Charafe‐Jauffret, Steven Van Laere, François Bertucci, Cécile Colpaert, Peter van Dam
Software Mentions: 8
Published: almost 5 years ago

10.1038/s41598-021-97090-0

Prognostic nomogram for predicting 5-year overall survival in Chinese patients with high-grade osteosarcoma
Cited by: 4
Author(s): Zhihong Yao, Zunxian Tan, Jifei Yang, Yihao Yang, Cao Wang, Jiaxiang Chen, Yanan Zhu, Tiying Wang, Lei Han, Lin Zhu, Zuozhang Yang
Software Mentions: 8
Published: about 5 years ago

10.1038/s41598-020-75161-y

Strap muscle invasion in differentiated thyroid cancer does not impact disease-specific survival: a population-based study
Cited by: 4
Author(s): Ja Kyung Yoon, Jandee Lee, Min Jung Kim, Jung Hyun Yoon, Vivian Youngjean Park, Kyunghwa Han, Jin Young Kwak
Software Mentions: 8
Published: almost 6 years ago

10.3390/cancers13143621

HPV Infection Leaves a DNA Methylation Signature in Oropharyngeal Cancer Affecting Both Coding Genes and Transposable Elements
Cited by: 10
Author(s): Diego Camuzi, Luisa Aguirre Buexm, Simone De Queiroz Chaves Lourenço, Davide Degli Esposti, Cyrille Cuenin, Monique de Souza Almeida Lopes, Francesca Manara, Fazlur Rahman Talukdar, Zdenko Herceg, Luís Felipe Ribeiro Pinto, Sheila Coelho Soares-Lima
Software Mentions: 8
Published: about 5 years ago

10.3389/fonc.2020.01198

Immune Landscape of the Tumor Microenvironment Identifies Prognostic Gene Signature CD4/CD68/CSF1R in Osteosarcoma
Cited by: 25
Author(s): Yi-Jiang Song, Yanyang Xu, Xuejun Zhu, Jianchang Fu, Cong Deng, Hongmin Chen, Huaiyuan Xu, Guohui Song, Jinchang Lu, Qinglian Tang, Jin Wang
Software Mentions: 8
Published: about 6 years ago

10.1038/s41598-021-85680-x

A 14-gene gemcitabine resistance gene signature is significantly associated with the prognosis of pancreatic cancer patients
Cited by: 9
Author(s): Xing Wei, Xiaochong Zhou, Yun Zhao, Yao He, Zhen Weng, Chunfang Xu
Software Mentions: 8
Published: over 5 years ago

10.3390/cancers12102802

Comparison of the Tree-Based Machine Learning Algorithms to Cox Regression in Predicting the Survival of Oral and Pharyngeal Cancers: Analyses Based on SEER Database
Cited by: 31
Author(s): Mi Du, Dandara Haag, John Lynch, Murthy Mittinty
Software Mentions: 8
Published: almost 6 years ago

10.3389/fonc.2019.01243

Identification of Subtype-Specific Three-Gene Signature for Prognostic Prediction in Diffuse Type Gastric Cancer
Cited by: 12
Author(s): Bowen Bao, Chunlei Zheng, Bowen Yang, Yue Jin, Kezuo Hou, Zhi Li, Xueying Zheng, Shitong Yu, Xiaojie Zhang, Yibo Fan, Xiujuan Qu, Yunpeng Liu, Xiaofang Che
Software Mentions: 8
Published: almost 7 years ago

10.1186/s12964-019-0397-4

Subtyping of microsatellite instability-high colorectal cancer
Cited by: 28
Author(s): Wangxiong Hu, Yanmei Yang, Ling Qi, Jiani Chen, Weiting Ge, Shu Zheng
Software Mentions: 8
Published: about 7 years ago

10.3389/fonc.2020.01716

A Prognostic Prediction Model Developed Based on Four CpG Sites and Weighted Correlation Network Analysis Identified DNAJB1 as a Novel Biomarker for Pancreatic Cancer
Cited by: 13
Author(s): Lingming Kong, Peng Liu, Xiang Fei, Tianyu Wu, Zhongpeng Wang, Baohui Zhang, Jiatong Li, Xiaodong Tan
Software Mentions: 8
Published: about 6 years ago

10.1038/s41419-021-03525-x

Loss of retinoic acid receptor-related receptor alpha (Rorα) promotes the progression of UV-induced cSCC
Cited by: 6
Author(s): Guolong Zhang, Guorong Yan, Fu Zhuo, Yuhao Wu, Fei Wu, Zhe Zheng, Shiji Fang, Ying Gao, Xiao Bao, Yeqiang Liu, Xiuli Wang, Sibo Zhu
Software Mentions: 8
Published: over 5 years ago

10.3389/fneur.2019.01060

Notification Strategy and Predictors of Outcome in Stroke Ineligible for Reperfusion Therapies
Cited by: 2
Author(s): Ágnes Mirolovics, Magdolna Bokor, Balázs Dobi, Judit Zsuga, Dániel Bereczki
Software Mentions: 8
Published: almost 7 years ago

10.3389/fneur.2021.651869

Network Mapping of Time to Antithrombotic Therapy Among Patients With Ischemic Stroke and Transient Ischemic Attack (TIA)
Cited by: 1
Author(s): Thanh G. Phan, Benjamin Clissold, Shaloo Singhal, John Ly, Andy Lim, Jason Vuong, Sai-Yin Ho, Chelsea Matley, Talvika Kooblal, Henry Ma
Software Mentions: 8
Published: over 5 years ago

10.3389/fmolb.2021.675683

Targeted Demethylation of the PLOD2 mRNA Inhibits the Proliferation and Migration of Renal Cell Carcinoma
Cited by: 9
Author(s): Congcong Cao, Qian Ma, Xinbo Huang, Aolin Li, Jun Li, Jing Ye, Yaoting Gui
Software Mentions: 8
Published: over 5 years ago

10.1161/CIRCEP.120.008651

Complete Electroanatomic Imaging of the Diastolic Pathway Is Associated With Improved Freedom From Ventricular Tachycardia Recurrence
Cited by: 22
Author(s): Alexios Hadjis, Antonio Frontera, Luca Rosario Limite, Caterina Bisceglia, Ludovica Bognoni, Luca Foppoli, Felicia Lipartiti, Gabriele Paglino, Andrea Radinovic, Georgio Tsitsinakis, Federico Calore, Paolo Della Bella
Software Mentions: 8
Published: about 6 years ago

10.1186/s13148-020-00838-0

DNA methylation outlier burden, health, and ageing in Generation Scotland and the Lothian Birth Cohorts of 1921 and 1936
Cited by: 17
Author(s): Anne Seeboth, Daniel L. McCartney, Yunzhang Wang, Robert F. Hillary, Anna J. Stevenson, Rosie M. Walker, Archie Campbell, Kathryn Evans, Andrew M. McIntosh, Sara Hägg, Ian J. Deary, Riccardo E. Marioni
Software Mentions: 8
Published: over 6 years ago

10.3389/fmolb.2021.655126

Silencing of the TRIM58 Gene by Aberrant Promoter Methylation is Associated with a Poor Patient Outcome and Promotes Cell Proliferation and Migration in Clear Cell Renal Cell Carcinoma
Cited by: 6
Author(s): Ying Gan, Congcong Cao, Aolin Li, Haifeng Song, Guanyu Kuang, Binglei Ma, Quan Zhang, Qian Zhang
Software Mentions: 8
Published: over 5 years ago

10.3389/fmed.2021.644053

Comprehensive Analysis Identifies Potential Ferroptosis-Associated mRNA Therapeutic Targets in Ovarian Cancer
Cited by: 16
Author(s): Jiyan Zhang, Jie Xi, Ping Huang, Saitian Zeng
Software Mentions: 8
Published: over 5 years ago

10.1002/ctm2.20

Nomograms for predicting specific distant metastatic sites and overall survival of colorectal cancer patients: A large population‐based real‐world study
Cited by: 26
Author(s): Shaobo Mo, Xin Cai, Zheng Zhou, Yaqi Li, Xiang Hu, Xiaolong Ma, Long Zhang, Sanjun Cai, Junjie Peng
Software Mentions: 8
Published: over 6 years ago

10.3390/cancers12010045

N-Terminal Truncated Myb with New Transcriptional Activity Produced Through Use of an Alternative MYB Promoter in Salivary Gland Adenoid Cystic Carcinoma
Cited by: 11
Author(s): Candace A. Frerich, Hailey N. Sedam, Huining Kang, Yoshitsugu Mitani, Adel K. El‐Naggar, Scott A. Ness
Software Mentions: 8
Published: over 6 years ago

10.3390/cancers13071561

NF2 and Canonical Hippo-YAP Pathway Define Distinct Tumor Subsets Characterized by Different Immune Deficiency and Treatment Implications in Human Pleural Mesothelioma
Cited by: 19
Author(s): Haitang Yang, Sean Hall, Beibei Sun, Liang Zhao, Yanyun Gao, Ralph A. Schmid, Swee T. Tan, Ren‐Wang Peng, Feng Yao
Software Mentions: 8
Published: over 5 years ago

10.1093/conphys/coaa002

Effects of ultraviolet-B radiation on physiology, immune function and survival is dependent on temperature: implications for amphibian declines
Cited by: 17
Author(s): Niclas U. Lundsgaard, Rebecca L. Cramp, Craig E. Franklin
Software Mentions: 8
Published: over 6 years ago

10.3389/fimmu.2021.606146

Expression of MICA in Zero Hour Biopsies Predicts Graft Survival After Liver Transplantation
Cited by: 3
Author(s): Thomas Resch, Hubert Hackl, Hannah Esser, Julia Günther, H. G. Schwelberger, Paul Viktor Ritschl, Susanne Ebner, Manuel Maglione, Vanessa Mellitzer, Matthias Biebl, Robert Öllinger, Heinz Zoller, Stefan Schneeberger, Katja Kotsch
Software Mentions: 8
Published: about 5 years ago

10.3389/fimmu.2021.670040

ARID1A, ARID1B, and ARID2 Mutations Serve as Potential Biomarkers for Immune Checkpoint Blockade in Patients With Non-Small Cell Lung Cancer
Cited by: 24
Author(s): Guangsheng Zhu, Ruifeng Shi, Yongwen Li, Zihe Zhang, Songlin Xu, Chen Chen, Peijun Cao, Hongbing Zhang, Minghui Liu, Zhengxia Pan, Hongyu Liu, Jun Chen
Software Mentions: 8
Published: about 5 years ago

10.3389/fgene.2019.01143

Identification of a Tumor Microenvironment-Related Eight-Gene Signature for Predicting Prognosis in Lower-Grade Gliomas
Cited by: 24
Author(s): Jun Su, Wenyong Long, Qianquan Ma, Kai Xiao, Li Yang, Qian Xiao, Gang Peng, Jian Yuan, Qing Liu
Software Mentions: 8
Published: almost 7 years ago

10.3389/fgene.2021.647353

Identification of Hub Genes and Their Correlation With Immune Infiltration Cells in Hepatocellular Carcinoma Based on GEO and TCGA Databases
Cited by: 22
Author(s): Rui Huang, Jinying Liu, Hui Li, Lierui Zheng, Haojun Jin, Yaqing Zhang, Wei Ma, Junhong Su, Min Wang, Kun Yang
Software Mentions: 8
Published: over 5 years ago

10.3390/cancers12071788

Characterization of Glycolysis-Associated Molecules in the Tumor Microenvironment Revealed by Pan-Cancer Tissues and Lung Cancer Single Cell Data
Cited by: 44
Author(s): Jinjia Wei, Kaitang Huang, Zixi Chen, Meiling Hu, Yunmeng Bai, Shudai Lin, Hongli Du
Software Mentions: 7
Published: about 6 years ago

10.1038/s41419-021-04015-w

Autophagy-related circRNA evaluation reveals hsa_circ_0001747 as a potential favorable prognostic factor for biochemical recurrence in patients with prostate cancer
Cited by: 16
Author(s): Chuanfan Zhong, Kuan-Hung Wu, Shuo Wang, Zining Long, Taowei Yang, Weibo Zhong, Xiao Tan, Zixian Wang, Chuanyin Li, Jianming Lü, Xiangming Mao
Software Mentions: 7
Published: about 5 years ago

10.1016/j.cell.2020.07.017

Therapy-Induced Evolution of Human Lung Cancer Revealed by Single-Cell RNA Sequencing
Cited by: 319
Author(s): Ashley Maynard, Caroline E. McCoach, Julia Rotow, Lincoln Harris, Franziska Haderk, D. Lucas Kerr, Elizabeth A. Yu, Erin L. Schenk, Weilun Tan, Alexander Zee, Michelle Tan, Philippe Gui, Tasha Lea, Wei Wu, Anatoly Urisman, Kirk D. Jones, Rene Sit, Pallav K. Kolli, E. Scott Seeley, Yaron Gesthalter, Daniel Le, Kevin A. Yamauchi, David M. Naeger, Sourav Bandyopadhyay, Khyati N. Shah, Lauren Cech, Norman Thomas, Anshal Gupta, Mayra A. Gonzalez, Hien Do, Lisa Tan, Bianca Bacaltos, Rafael Gómez-Sjöberg, Matthew A. Gubens, Thierry Jahan, Johannes R. Kratz, David M. Jablons, Norma Neff, Robert C. Doebele, Jonathan S. Weissman, Collin M. Blakely, Spyros Darmanis, Trever G. Bivona
Software Mentions: 7
Published: about 6 years ago

10.3389/fonc.2020.553399

CD8+ T Cell Co-Expressed Genes Correlate With Clinical Phenotype and Microenvironments of Urothelial Cancer
Cited by: 20
Author(s): Yutao Wang, Kexin Yan, Jiaxing Lin, Yang Liu, Jianfeng Wang, Xuejie Li, Xinxin Li, Zhixiong Hua, Zhenhua Zheng, Jianxiu Shi, Siqing Sun, Jianbin Bi
Software Mentions: 7
Published: almost 6 years ago

10.1038/s41598-021-94961-4

Delineating virulence of Vibrio campbellii: a predominant luminescent bacterial pathogen in Indian shrimp hatcheries
Cited by: 14
Author(s): Sujeet Kumar, Chandra Bhushan Kumar, Vidya Rajendran, Nishawlini Abishaw, P.S. Shyne Anand, S. Kannapan, Viswas Konasagara Nagaleekar, Koyadan Kizhakedath Vijayan, S.V. Alavandi
Software Mentions: 7
Published: about 5 years ago

10.1038/s42003-020-01318-0

Lung gene expression signatures suggest pathogenic links and molecular markers for pulmonary tuberculosis, adenocarcinoma and sarcoidosis
Cited by: 15
Author(s): Qiyao Chai, Zhe Lü, Zhidong Liu, Yanzhao Zhong, Fuzhen Zhang, Changgen Qiu, Bingxi Li, Jing Wang, Lingqiang Zhang, Yu Pang, Cui Hua Liu
Software Mentions: 7
Published: almost 6 years ago

10.3389/fimmu.2021.709986

Dissecting Tumor Antigens and Immune Subtypes of Glioma to Develop mRNA Vaccine
Cited by: 30
Author(s): Hua Zhong, Shuai Liu, Fang Cao, Yi Zhao, Jianguo Zhou, Feng Tang, Zhaohua Peng, Yangsheng Li, Shen Xu, Chunlin Wang, Guohua Yang, Zhiqiang Li
Software Mentions: 7
Published: about 5 years ago

10.3389/fonc.2021.585808

Prognostic Value of Lymph Node Dissection for Intrahepatic Cholangiocarcinoma Patients With Clinically Negative Lymph Node Metastasis: A Multi-Center Study From China
Cited by: 12
Author(s): Qiao Ke, Lei Wang, Zongming Lin, Jianying Lou, Shi Zheng, Xinyu Bi, Jianming Wang, Wei Guo, Fuyu Li, Jian Wang, Yang Zheng, Jingdong Li, Sheue-yann Cheng, Weiping Zhou, Yongyi Zeng
Software Mentions: 7
Published: over 5 years ago

10.1038/s41598-021-88177-9

A three-feature prediction model for metastasis-free survival after surgery of localized clear cell renal cell carcinoma
Cited by: 7
Author(s): Kalle Mattila, Teemu D. Laajala, Sara Tornberg, Tuomas P. Kilpeläinen, Paula Vainio, Otto Ettala, Peter J. Boström, Harry Nísen, Laura L. Elo, Panu M. Jaakkola
Software Mentions: 7
Published: over 5 years ago

10.3389/fonc.2020.01214

The Significance of the CLDN18-ARHGAP Fusion Gene in Gastric Cancer: A Systematic Review and Meta-Analysis
Cited by: 19
Author(s): Weihan Zhang, Shouyue Zhang, Qing Hou, Yun Qin, Xin-Zu Chen, Zong‐Guang Zhou, Yang Shu, Hong‐Xi Xu, Jian‐Kun Hu
Software Mentions: 7
Published: about 6 years ago

10.3389/fimmu.2021.653836

Identification of Prognostic Genes in the Tumor Microenvironment of Hepatocellular Carcinoma
Cited by: 41
Author(s): Shixin Xiang, Jing Li, Jing Shen, Yueshui Zhao, Xu Wu, Mingxing Li, Yang Xiao-mi, Parham Jabbarzadeh Kaboli, Fukuan Du, Yan Zheng, Qinglian Wen, Chi Hin Cho, Tao Yi, Zhangang Xiao
Software Mentions: 7
Published: over 5 years ago

10.1038/s41598-018-34933-3

Strong association between vertebral endplate defect and Modic change in the general population
Cited by: 32
Author(s): Juhani Määttä, Marinko Rade, Maxim B. Freidin, Olavi Airaksinen, Jaro Karppinen, Frances Williams
Software Mentions: 7
Published: almost 8 years ago

10.3389/fgene.2021.714639

Development and Validation of a Gene Mutation-Associated Nomogram for Hepatocellular Carcinoma Patients From Four Countries
Cited by: 5
Author(s): Tingping Huang, Tao Yan, Gonghai Chen, Chunqing Zhang
Software Mentions: 7
Published: almost 5 years ago

10.1038/s41598-021-84693-w

Single-cell differential splicing analysis reveals high heterogeneity of liver tumor-infiltrating T cells
Cited by: 12
Author(s): Shang Liu, Biaofeng Zhou, Liang Wu, Yan Sun, Jie Chen, Shiping Liu
Software Mentions: 7
Published: over 5 years ago

10.1038/s41598-018-32721-7

Termites shape their collective behavioural response based on stage of infection
Cited by: 41
Author(s): Hannah E. Davis, Stefania Meconcelli, Renate Radek, Dino P. McMahon
Software Mentions: 7
Published: almost 8 years ago

10.3389/fimmu.2021.645320

Effects of Hypoxia in Intestinal Tumors on Immune Cell Behavior in the Tumor Microenvironment
Cited by: 14
Author(s): Luping Zhang, Shaokun Wang, Yachen Wang, Wenjie Zhao, Yingli Zhang, Nan Zhang, Hong Xu
Software Mentions: 7
Published: over 5 years ago

10.1038/s41598-020-80197-1

Pro-inflammatory cytokine polymorphisms and interactions with dietary alcohol and estrogen, risk factors for invasive breast cancer using a post genome-wide analysis for gene–gene and gene–lifestyle interaction
Cited by: 6
Author(s): Su Yon Jung, Jeanette C. Papp, Eric M. Sobel, Matteo Pellegrini, Herbert Yu, Zuo‐Feng Zhang
Software Mentions: 7
Published: over 5 years ago

10.1038/s41598-020-77578-x

Empty mesoporous silica particles significantly delay disease progression and extend survival in a mouse model of ALS
Cited by: 7
Author(s): Marcel F. Leyton-Jaimes, Patrik Ivert, Jan Hoeber, Yilin Han, Adam Feiler, Chunfang Zhou, Stanislava Pankratova, Varda Shoshan‐Barmatz, Adrian Israelson, Elena N. Kozlova
Software Mentions: 7
Published: almost 6 years ago

10.1038/s41598-019-43758-7

In silico prediction of housekeeping long intergenic non-coding RNAs reveals HKlincR1 as an essential player in lung cancer cell survival
Cited by: 2
Author(s): Danish Memon, Jing Bi, Crispin Miller
Software Mentions: 7
Published: over 7 years ago

10.1038/s41598-020-72801-1

Severity assessment in mice subjected to carbon tetrachloride
Cited by: 13
Author(s): Lisa Ernst, Leonie Zieglowski, M Schulz, Michaela Moss, M. Meyer, Ralf Weiskirchen, Rupert Palme, Melanie Hamann, Steven R. Talbot, René Tolba
Software Mentions: 7
Published: almost 6 years ago

10.1155/2018/4879850

A Retrospective Cohort Study on Rehospitalization following Expanded Criteria Donor Kidney Transplantation
Cited by: 1
Author(s): Colin P Dunn, Emmanuel U. Emeasoba, Michael Hung, Ari J. Holtzman, Eran Bellin, Stuart Greenstein
Software Mentions: 7
Published: over 7 years ago

10.3389/fimmu.2021.739768

m6A Methylation Modification Patterns and Tumor Microenvironment Infiltration Characterization in Pancreatic Cancer
Cited by: 10
Author(s): Mengyu Sun, Meng Xie, Tongyue Zhang, Yijun Wang, Wenjie Huang, Limin Xia
Software Mentions: 7
Published: almost 5 years ago

10.1186/s13046-021-01938-2

Chemotherapy-induced CDA expression renders resistant non-small cell lung cancer cells sensitive to 5′-deoxy-5-fluorocytidine (5′-DFCR)
Cited by: 7
Author(s): Yanyun Gao, Philipp Zens, Min Su, Camila Anna Gemperli, Haitang Yang, Haibin Deng, Yang Zhang, Duo Xu, Sean Hall, Sabina Berezowska, Patrick Dorn, Ren‐Wang Peng, Ralph A. Schmid, Wenxiang Wang, Thomas Marti
Software Mentions: 7
Published: over 5 years ago

10.1038/s41598-018-34129-9

SAC3D1: a novel prognostic marker in hepatocellular carcinoma
Cited by: 37
Author(s): Myoung‐Eun Han, Jiyoung Kim, Ga Hyun Kim, Si Young Park, Yun Hak Kim, Sae‐Ock Oh
Software Mentions: 7
Published: almost 8 years ago

10.1038/s41598-020-69082-z

Immune expression signatures as candidate prognostic biomarkers of age and gender survival differences in cutaneous melanoma
Cited by: 6
Author(s): Yi Jun Kim, Kyubo Kim, Kye Hwa Lee, Jiyoung Kim, Wonguen Jung
Software Mentions: 7
Published: about 6 years ago

10.3389/fgene.2020.00899

Identification of a Five-Gene Signature for Predicting Survival in Malignant Pleural Mesothelioma Patients
Cited by: 6
Author(s): Yi-Yang Bai, Wang Xiao, Jie Hou, Luying Geng, Xuan Liang, Zhiping Ruan, Hui Guo, Nan Kang, Lili Jiang
Software Mentions: 7
Published: about 6 years ago

10.1007/s11605-020-04836-8

Endoscopic Resection Without Subsequent Ablation Therapy for Early Barrett’s Neoplasia: Endoscopic Findings and Long-Term Mortality
Cited by: 7
Author(s): Sanne N. van Munster, Esther Nieuwenhuis, Bas L. Weusten, Lorenza Alvarez Herrero, Auke Bogte, A. Alkhalaf, B.E. Schenk, Erik J. Schoon, Wouter L. Curvers, Arjun D. Koch, Steffi Elisabeth Maria van de Ven, P.J.F. de Jonge, Thjon J. Tang, WB Nagengast, Frans Peters, Jessie Westerhof, Martin H. Houben, Jacques Bergman, Roos E. Pouw
Software Mentions: 7
Published: almost 6 years ago

10.1161/CIRCULATIONAHA.117.028084

Direct Comparison of Cardiac Myosin-Binding Protein C With Cardiac Troponins for the Early Diagnosis of Acute Myocardial Infarction
Cited by: 57
Author(s): Thomas E Kaier, Raphael Twerenbold, Christian Puelacher, Jack Marjot, Nazia Imambaccus, Jasper Boeddinghaus, Thomas Nestelberger, Patrick Badertscher, Zaid Sabti, María Rubini Giménez, Karin Wildi, Petra Hillinger, Karin Grimm, Sarah Loeffel, Samyut Shrestha, Dayana Flores, Janosch Cupa, Nikola Kozhuharov, Òscar Miró, Francisco Javier Martín‐Sánchez, Beata Morawiec, Katharina Rentsch, Jens Lohrmann, Wanda Kloos, Stefan Oßwald, Tobias Reichlin, Ekkehard Weber, Michael Marber, Christian Müeller
Software Mentions: 7
Published: almost 9 years ago

10.3389/fmolb.2021.645845

A Novel Defined Risk Signature of the Ferroptosis-Related Genes for Predicting the Prognosis of Ovarian Cancer
Cited by: 23
Author(s): Ying Yang, Qinjin Dai, Shuhong Li, Jie He, Hongbo Qi
Software Mentions: 7
Published: over 5 years ago

10.3389/fmicb.2020.566619

Competitive Exclusion Prevents Colonization and Compartmentalization Reduces Transmission of ESBL-Producing Escherichia coli in Broilers
Cited by: 13
Author(s): Anita Dame-Korevaar, Jannigje G. Kers, Jeanet van der Goot, Francisca C. Velkers, Daniela Ceccarelli, Dik Mevius, Arjan Stegeman, E.A.J. Fischer
Software Mentions: 7
Published: almost 6 years ago

10.3390/cancers12082310

Systematic Analysis of Aberrant Biochemical Networks and Potential Drug Vulnerabilities Induced by Tumor Suppressor Loss in Malignant Pleural Mesothelioma
Cited by: 15
Author(s): Haitang Yang, Duo Xu, Yang Zhang, Feng Yao, Heng Zhao, Ralph A. Schmid, Ren‐Wang Peng
Software Mentions: 7
Published: about 6 years ago

10.3389/fmolb.2020.00053

Intrinsic Genetic and Transcriptomic Patterns Reflect Tumor Immune Subtypes Facilitating Exploring Possible Combinatory Therapy
Cited by: 1
Author(s): Yong Xu, Daixi Li, Zhenhao Liu, David L. Gibbs, Lu Xie, Guangrong Qin
Software Mentions: 7
Published: over 6 years ago

10.3389/fgene.2021.722992

A Coagulation-Related Gene-Based Prognostic Model for Invasive Ductal Carcinoma
Cited by: 11
Author(s): Jing Li, Jiang Du, Yanhong Wang, Hong-Ti Jia
Software Mentions: 7
Published: almost 5 years ago

10.3390/cancers13164087

Prognostic Value of Procalcitonin, C-Reactive Protein, and Lactate Levels in Emergency Evaluation of Cancer Patients with Suspected Infection
Cited by: 5
Author(s): Patrick Chaftari, Aiham Qdaisat, Anne-Marie Chaftari, Julian Maamari, Ziyi Li, Florea Lupu, Issam Raad, Ray Hachem, George A. Calin, Sai Ching Jim Yeung
Software Mentions: 7
Published: about 5 years ago

10.3390/cancers12061453

DSCAM-AS1-Driven Proliferation of Breast Cancer Cells Involves Regulation of Alternative Exon Splicing and 3′-End Usage
Cited by: 16
Author(s): Jamal Elhasnaoui, Valentina Miano, Giulio Ferrero, Elena Doria, Antonette E. Leon, Aline S C Fabrício, Laura Annaratone, Isabella Castellano, Anna Sapino, Michele De Bortoli
Software Mentions: 7
Published: over 6 years ago

10.1038/s41420-021-00451-x

A novel defined pyroptosis-related gene signature for predicting the prognosis of ovarian cancer
Cited by: 256
Author(s): Ying Yang, Qinjin Dai, Hongbo Qi
Software Mentions: 7
Published: over 5 years ago

10.1371/journal.pone.0235779

Prostate MRI added to CAPRA, MSKCC and Partin cancer nomograms significantly enhances the prediction of adverse findings and biochemical recurrence after radical prostatectomy
Cited by: 7
Author(s): Kevin Sandeman, Juho Eineluoto, Joona Pohjonen, Andrew Erickson, Tuomas P. Kilpeläinen, Petrus Järvinen, Henrikki Santti, Anssi Pétas, Mika Matikainen, Suvi Marjasuo, Anu Kenttämies, Tuomas Mirtti, Antti Rannikko
Software Mentions: 7
Published: about 6 years ago

10.1111/jcmm.16395

STAT1 is a key gene in a gene regulatory network related to immune phenotypes in bladder cancer: An integrative analysis of multi‐omics data
Cited by: 1
Author(s): Hong Weng, Shuai Yuan, Qiao Huang, Xian‐Tao Zeng, Xinghuan Wang
Software Mentions: 7
Published: over 5 years ago

10.3389/fcell.2021.688798

QSOX2 Is an E2F1 Target Gene and a Novel Serum Biomarker for Monitoring Tumor Growth and Predicting Survival in Advanced NSCLC
Cited by: 3
Author(s): Yaqi Li, Mei Liu, Zhuoxian Zhang, Libin Deng, Zhenyu Zhai, Hua Liu, Yiting Wang, Cheng Zhang, Jianping Xiong, Chao Shi
Software Mentions: 7
Published: about 5 years ago

10.1111/acel.12769

Lifelong reduction in complex IV induces tissue-specific metabolic effects but does not reduce lifespan or healthspan in mice
Cited by: 11
Author(s): Sathyaseelan S. Deepa, Gavin Pharaoh, Michael Kinter, Vivian Diaz, Wilson C. Fok, Kaitlyn Riddle, Daniel Pulliam, Shauna Hill, Kathleen E. Fischer, Vanessa Soto, Constantin Georgescu, Jonathan D. Wren, Carlo Viscomi, Arlan Richardson, Holly Van Remmen
Software Mentions: 7
Published: over 8 years ago

10.1371/journal.pone.0148782

Use of Renal Replacement Therapy May Influence Graft Outcomes following Liver Transplantation for Acute Liver Failure: A Propensity-Score Matched Population-Based Retrospective Cohort Study
Cited by: 9
Author(s): Stephen R Knight, Gabriel C. Oniscu, Luke Devey, Kenneth J. Simpson, Stephen J. Wigmore, Ewen M Harrison
Software Mentions: 7
Published: over 10 years ago

10.1186/s12885-018-4345-2

The impact of pharmacokinetic gene profiles across human cancers
Cited by: 3
Author(s): Michael T. Zimmermann, Terry M. Therneau, Jean Pierre A. Kocher
Software Mentions: 7
Published: over 8 years ago

10.1111/jcmm.15805

Identification of purity and prognosis‐related gene signature by network analysis and survival analysis in brain lower grade glioma
Cited by: 15
Author(s): Zujian Xiong, Yi Xiong, Hongwei Liu, L. Chang, Xuejun Li
Software Mentions: 7
Published: about 6 years ago

10.3389/fcell.2021.726716

Identification of an Immune-Related Long Noncoding RNA Pairs Model to Predict Survival and Immune Features in Gastric Cancer
Cited by: 8
Author(s): Shenglei Song, Shuhao Liu, Zhewei Wei, Xinghan Jin, Deli Mao, Yulong He, Bo Li, Changhua Zhang
Software Mentions: 7
Published: almost 5 years ago

10.3389/fcell.2021.658642

HNRNPA2B1 Affects the Prognosis of Esophageal Cancer by Regulating the miR-17-92 Cluster
Cited by: 21
Author(s): Kexin Li, Jiongyu Chen, Xiaoying Lou, Yiling Li, Benheng Qian, Danfei Xu, Yue Wu, Shaohui Ma, Donghong Zhang, Wei Cui
Software Mentions: 7
Published: about 5 years ago

10.1371/journal.pone.0209589

A metatranscriptomic analysis of diseased social wasps (Vespula vulgaris) for pathogens, with an experimental infection of larvae and nests
Cited by: 12
Author(s): Oliver Quinn, Monica A. M. Gruber, Robert L. Brown, James W. Baty, Mariana Bulgarella, Philip J. Lester
Software Mentions: 7
Published: over 7 years ago

10.1186/s12915-020-00910-4

Deconvolution of cellular subsets in human tissue based on targeted DNA methylation analysis at individual CpG sites
Cited by: 24
Author(s): Marco F. Schmidt, Tiago Maié, Edgar Dahl, Ivan G. Costa, Wolfgang Wagner
Software Mentions: 7
Published: almost 6 years ago

10.3389/fcell.2021.673838

Construction of a Promising Tumor-Infiltrating CD8+ T Cells Gene Signature to Improve Prediction of the Prognosis and Immune Response of Uveal Melanoma
Cited by: 13
Author(s): Yifang Sun, Jian Wu, Yuchao Yuan, Yumin Lu, Ming Luo, Ling Lin, Shuping Ma
Software Mentions: 7
Published: over 5 years ago

10.18632/aging.202278

Identification of long non-coding RNA signatures for squamous cell carcinomas and adenocarcinomas
Cited by: 0
Author(s): Suyan Tian, Mingbo Tang, Jialin Li, Chi Wang, Wei Liu
Software Mentions: 7
Published: almost 6 years ago

10.7150/jca.53831

Development and Validation of an Immune-Related Long Non-coding RNA Prognostic Model in Glioma
Cited by: 5
Author(s): Xiaowei Qiu, Yuan Tian, Jingnan Xu, Xin Jiang, Zeyu Liu, Xuewei Qi, Xin Chang, Jianxin Zhao, Jinchang Huang
Software Mentions: 7
Published: over 5 years ago

10.3389/fcell.2021.668810

Novel Molecular Subtypes and Related Score Based on Histone Acetylation Modification in Renal Clear Cell Carcinoma
Cited by: 3
Author(s): Qianqian Wang, Ting Xiang, Ling Yu, Junping Wen, Fang Liu, Dong Yang, Wei Wu, Ling Hu
Software Mentions: 7
Published: almost 5 years ago

10.7150/jca.47557

Identification of a prognostic 4-mRNA signature in laryngeal squamous cell carcinoma
Cited by: 1
Author(s): Cheng Zhang, Bin Shen, Xinwei Chen, Shang Gao, Xiaohua Ying, Pin Dong
Software Mentions: 7
Published: over 5 years ago

10.1186/s12859-019-2899-x

Efficient estimation of grouped survival models
Cited by: 0
Author(s): Zhiguo Li, Jiaxing Lin, Alexander B. Sibley, Tracy Truong, Katherina C. Chua, Yu Jiang, Janice McCarthy, Deanna L. Kroetz, Andrew S. Allen, Kouros Owzar
Software Mentions: 7
Published: over 7 years ago

10.3389/fcell.2021.659080

ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation
Cited by: 8
Author(s): Zhongxiao Lin, Ming‐Shien Wen, Enxing Yu, Xiao Yan Lin, Hua Wang, Jiayu Chen, Chaojie Yao, Hengli Zhang, Junnan Ru, Kankai Wang, Ying Zhang, Lijie Huang, Qichuan Zhuge, Shuxu Yang
Software Mentions: 7
Published: about 5 years ago

10.1186/s12874-021-01319-5

Development and validation of a risk index to predict kidney graft survival: the kidney transplant risk index
Cited by: 7
Author(s): Sameera Senanayake, Sanjeewa Kularatna, Helen Healy, Nicholas Graves, Keshwar Baboolal, Matthew P. Sypek, Adrian Barnett
Software Mentions: 7
Published: about 5 years ago

Projects: cran: survival

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Science Score: 100/100

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Papers Mentioning survival 1,690