cran: survival | Projects | Ecosyste.ms: Papers

10.1038/s41416-018-0167-x

S100B and LDH as early prognostic markers for response and overall survival in melanoma patients treated with anti-PD-1 or combined anti-PD-1 plus anti-CTLA-4 antibodies
Cited by: 79
Author(s): Nikolaus Benjamin Wagner, Andrea Forschner, Ulrike Leiter, Claus Garbe, Thomas Eigentler
Software Mentions: 2
Published: over 8 years ago

10.1038/s41416-019-0448-z

ECT2 associated to PRICKLE1 are poor-prognosis markers in triple-negative breast cancer
Cited by: 13
Author(s): Avais M. Daulat, Pascal Finetti, Diego R. Revinski, Marta Wagner, Luc Camoin, Stéphane Audebert, Daniel Birnbaum, Laurent Kodjabachian, Jean-Paul Borg, François Bertucci
Software Mentions: 2
Published: over 7 years ago

10.1186/s12890-021-01635-y

LncRNA MANCR positively affects the malignant progression of lung adenocarcinoma
Cited by: 4
Author(s): Chang Liu, Haifeng Li, Xiaojing Li, Xuejing Zhao, Xia Zhang
Software Mentions: 2
Published: about 5 years ago

10.1038/s41416-019-0542-2

Acidity promotes tumour progression by altering macrophage phenotype in prostate cancer
Cited by: 78
Author(s): Asmaa El-Kenawi, Chandler D. Gatenbee, Mark Robertson-Tessi, Rafael Bravo, Jasreman Dhillon, Yoganand Balagurunathan, Anders Berglund, Naveen Kumar Vishvakarma, Arig Ibrahim‐Hashim, Jung Woo Choi, Kimberly A. Luddy, Robert A. Gatenby, Shari Pilon‐Thomas, Alexander R.A. Anderson, Brian Ruffell, Robert J. Gillies
Software Mentions: 2
Published: about 7 years ago

10.1038/s41416-018-0252-1

Statin use and risk of contralateral breast cancer: a nationwide cohort study
Cited by: 19
Author(s): Rikke Langballe, Deirdre Cronin‐Fenton, Christian Dehlendorff, Maj-Britt Jensen, Bent Ejlertsen, Michael Andersson, Søren Friis, Lene Mellemkjær
Software Mentions: 2
Published: about 8 years ago

10.3390/cells8090958

Influenza A Hemagglutinin Passage Bias Sites and Host Specificity Mutations
Cited by: 6
Author(s): Raphael Tze Chuen Lee, Hsiao‐Han Chang, Colin A. Russell, Marc Lipsitch, Sebastian Maurer‐Stroh
Software Mentions: 2
Published: about 7 years ago

10.1186/s12882-016-0351-2

Epidemiology and outcomes of acute kidney injury in elderly chinese patients: a subgroup analysis from the EACH study
Cited by: 35
Author(s): Shuwang Ge, Sheng Nie, Zhangsuo Liu, Chunbo Chen, Yan Zha, Ji Qian, Bi‐Cheng Liu, Siyuan Teng, Anping Xu, Bin Wei, Xin Xu, Gang Xu
Software Mentions: 2
Published: about 10 years ago

10.1038/s41416-018-0354-9

The oral selective oestrogen receptor degrader (SERD) AZD9496 is comparable to fulvestrant in antagonising ER and circumventing endocrine resistance
Cited by: 44
Author(s): Agostina Nardone, Hazel M. Weir, Oona Delpuech, H. Shelton Brown, Carmine De Angelis, Maria Letizia Cataldo, Xiaoyong Fu, Martin J. Shea, Tamika Mitchell, Jamunarani Veeraraghavan, Chandandeep Nagi, Mark Pilling, Mothaffar F. Rimawi, Meghana V. Trivedi, Susan G. Hilsenbeck, Gary C. Chamness, Rinath Jeselsohn, C. Kent Osborne, Rachel Schiff
Software Mentions: 2
Published: almost 8 years ago

10.1038/s41416-019-0415-8

Can we classify ampullary tumours better? Clinical, pathological and molecular features. Results of an AGEO study
Cited by: 18
Author(s): Géraldine Perkins, Magali Svrcek, Cecile Bouchet-Doumenq, Thibault Voron, Orianne Colussi, Clotilde Debove, Fatiha Merabtene, Sylvie Dumont, Alain Sauvanet, Pascal Hammel, Jérôme Cros, André Thewis, Jean‐Baptiste Bachet, A Bardier, Richard Douard, Tchao Méatchi, Frédérique Peschaud, Jean‐François Emile, Isabelle Cojean-Zelek, Pierre Laurent‐Puig, Julien Taieb
Software Mentions: 2
Published: over 7 years ago

10.1186/s12889-018-5144-z

The impact of alcohol among injury patients in Moshi, Tanzania: a nested case-crossover study
Cited by: 41
Author(s): Catherine A. Staton, João Ricardo Nickenig Vissoci, Nicole Toomey, Jihad Abdelgadir, Patricia Chou, Michael M. Haglund, Blandina T. Mmbaga, Mark Mvungi, Monica H. Swahn
Software Mentions: 2
Published: over 8 years ago

10.3390/ani11020316

Evaluation of Spatio-Temporal Patterns of Predation Risk to Forest Grouse Nests in the Central European Mountain Regions
Cited by: 4
Author(s): Jan Cukor, Rostislav Linda, Oddgeir Andersen, Lasse Eriksen, Zdeněk Vacek, Jan Riegert, Martin Šálek
Software Mentions: 2
Published: over 5 years ago

10.1186/s12882-017-0445-5

Non anti-coagulant factors associated with filter life in continuous renal replacement therapy (CRRT): a systematic review and meta-analysis
Cited by: 58
Author(s): Matthew Brain, Elizabeth Winson, Owen Roodenburg, John J McNeil
Software Mentions: 2
Published: over 9 years ago

10.3390/ani11010236

Prediction of Calving to Conception Interval Length Using Algorithmic Analysis of Endometrial mRNA Expression in Bovine
Cited by: 2
Author(s): Dawid Tobolski, Karolina Łukasik, Agnieszka Bacławska, Dariusz Skarżyński, Miel Hostens, Wojciech Barański
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pbio.2001861

Antibiotic exposure perturbs the gut microbiota and elevates mortality in honeybees
Cited by: 316
Author(s): Kasie Raymann, Zack Shaffer, Nancy A. Moran
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pgen.1007194

Paternal lineage early onset hereditary ovarian cancers: A Familial Ovarian Cancer Registry study
Cited by: 13
Author(s): Kevin H. Eng, J. Brian Szender, John Lewis Etter, Jasmine Kaur, Samantha Poblete, Ruea‐Yea Huang, Qianqian Zhu, Katherine Grzesik, Sebastiano Battaglia, Rikki A. Cannioto, John J. Krolewski, Emese Zsiros, Peter J. Frederick, Shashikant Lele, Kirsten B. Moysich, Kunle Odunsi
Software Mentions: 2
Published: over 8 years ago

10.1186/1471-2458-12-676

Association between self-rated health and mortality: 10 years follow-up to the Pró-Saúdecohort study
Cited by: 65
Author(s): Joanna Miguez Nery Guimarães, Dóra Chor, Guilherme Loureiro Werneck, Marília Sá Carvalho, Cláudia Medina Coeli, Cláudia S. Lopes, Eduardo Faerstein
Software Mentions: 2
Published: about 14 years ago

10.1371/journal.pgen.1000346

Copy Number Variation of CCL3-like Genes Affects Rate of Progression to Simian-AIDS in Rhesus Macaques (Macaca mulatta)
Cited by: 64
Author(s): Jeremiah D. Degenhardt, Paola de Candia, Adrien E. Chabot, Stuart Schwartz, Les Henderson, Binhua Ling, Meredith Hunter, Zhaoshi Jiang, Robert E. Palermo, Michael G. Katze, Evan E. Eichler, Mario Ventura, Jeffrey Rogers, Preston A. Marx, Yoav Gilad, Carlos D. Bustamante
Software Mentions: 2
Published: almost 18 years ago

10.1371/journal.pmed.1001968

A Novel Brief Therapy for Patients Who Attempt Suicide: A 24-months Follow-Up Randomized Controlled Study of the Attempted Suicide Short Intervention Program (ASSIP)
Cited by: 179
Author(s): Anja Gysin-Maillart, Simon Schwab, Leila M. Soravia, Millie Megert, Konrad Michel
Software Mentions: 2
Published: over 10 years ago

10.1186/s12889-016-3921-0

Psychological, social, and mechanical work exposures and disability retirement: a prospective registry study
Cited by: 11
Author(s): Jan Shahid Emberland, Morten Birkeland Nielsen, Stein Knardahl
Software Mentions: 2
Published: almost 10 years ago

10.1186/s13148-017-0397-4

Prognostic relevance of an epigenetic biomarker panel in sentinel lymph nodes from colon cancer patients
Cited by: 3
Author(s): Guro Elisabeth Lind, Marianne Guriby, Terje Cruickshank Ahlquist, Israr Hussain, M. Jeanmougin, Kjetil Søreide, Hartwig Kørner, Ragnhild Lothe, Oddmund Nordgård
Software Mentions: 2
Published: about 9 years ago

10.1186/s13054-017-1812-0

Weekends affect mortality risk and chance of discharge in critically ill patients: a retrospective study in the Austrian registry for intensive care
Cited by: 16
Author(s): Paul Zajic, Péter Bauer, Andrew Rhodes, Rui P. Moreno, Tobias Fellinger, Barbara Metnitz, Faidra Stavropoulou, Martin Posch, Philipp Metnitz
Software Mentions: 2
Published: about 9 years ago

10.1186/s12880-021-00651-y

Pneumatosis intestinalis and porto-mesenteric venous gas: a multicenter study
Cited by: 2
Author(s): Marta Della Seta, Roman Kloeckner, Daniel Pinto dos Santos, Thula Walter, Felix Hähn, Jörn Henze, Annika Gropp, Johann Pratschke, Bernd Hamm, Dominik Geisel, Timo Alexander Auer
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0016950

High-Resolution Comparative Genomic Hybridization of Inflammatory Breast Cancer and Identification of Candidate Genes
Cited by: 56
Author(s): Ismahane Bekhouche, Pascal Finetti, José Adélaı̈de, Anthony Ferrari, Carole Tarpin, Emmanuelle Charafe-Jauffret, Colette Charpin, Gilles Houvenaeghel, Jocelyne Jacquemier, Ghislain Bidaut, Daniel Birnbaum, Patrice Viens, Max Chaffanet, François Bertucci
Software Mentions: 2
Published: over 15 years ago

10.1007/s00784-020-03512-0

Massive data analyses show negative impact of type 1 and 2 diabetes on the outcome of periodontal treatment
Cited by: 3
Author(s): Michael Raedel, Barbara Noack, Heinz‐Werner Priess, Steffen Böhm, Michael Walter
Software Mentions: 2
Published: about 6 years ago

10.1186/s12911-016-0297-0

Discovery of prostate specific antigen pattern to predict castration resistant prostate cancer of androgen deprivation therapy
Cited by: 7
Author(s): Yejin Kim, Yong Hyun Park, Ji Youl Lee, In Young Choi, Hwanjo Yu
Software Mentions: 2
Published: over 10 years ago

10.4269/ajtmh.20-0657

Delayed Time to Cryptosporidiosis in Bangladeshi Children is Associated with Greater Fecal IgA against Two Sporozoite-Expressed Antigens
Cited by: 8
Author(s): Kevin L. Steiner, Mamun Kabir, Biplob Hossain, Carol A. Gilchrist, Z. Jennie, Tahmeed Ahmed, Abu Syed Golam Faruque, Rashidul Haque, William A. Petri
Software Mentions: 2
Published: almost 6 years ago

10.3390/cancers11081158

A Tyrosine Kinase Expression Signature Predicts the Post-Operative Clinical Outcome in Triple Negative Breast Cancers
Cited by: 5
Author(s): Alexandre de Nonneville, Pascal Finetti, José Adélaı̈de, Éric Lambaudie, Patrice Viens, Anthony Gonçalvès, Daniel Birnbaum, Émilie Mamessier, François Bertucci
Software Mentions: 2
Published: about 7 years ago

10.1016/j.ajhg.2016.07.012

Trans-ethnic Fine Mapping Highlights Kidney-Function Genes Linked to Salt Sensitivity
Cited by: 63
Author(s): Anubha Mahajan, Aylin R. Rodan, Thu H. Le, Kyle J. Gaulton, Jeffrey Haessler, Adrienne M. Stilp, Yoichiro Kamatani, Gu Zhu, Tamar Sofer, Sanjana Puri, Jeffrey N. Schellinger, Pei-Lun Chu, Sylvia Cechova, Natalie Van Zuydam, Johan Ärnlöv, Michael F. Flessner, Vilmantas Giedraitis, Andrew C. Heath, Michiaki Kubo, Anders Larsson, Cecilia M. Lindgren, Pamela A. F. Madden, Grant W. Montgomery, George Papanicolaou, Alex P. Reiner, Johan Sundström, Timothy A. Thornton, Lars Lind, Erik Ingelsson, Jianwen Cai, Nicholas G. Martin, Charles Kooperberg, Koichi Matsuda, John B. Whitfield, Yukinori Okada, Cathy C. Laurie, Andrew P. Morris, Nora Franceschini
Software Mentions: 2
Published: about 10 years ago

10.1186/s12883-014-0207-y

SOX4 inhibits GBM cell growth and induces G0/G1 cell cycle arrest through Akt-p53 axis
Cited by: 29
Author(s): Jing Zhang, Hongyi Jiang, Jiaofang Shao, Rong Mao, Jie Liu, Yingying Ma, Xuefeng Fang, Na Zhao, Shu Zheng, Biaoyang Lin
Software Mentions: 2
Published: almost 12 years ago

10.1186/s12911-018-0686-7

Preliminary exploration of survival analysis using the OHDSI common data model: a case study of intrahepatic cholangiocarcinoma
Cited by: 6
Author(s): Na Hong, Ning Zhang, Huawei Wu, Shanshan Lu, Yue Yu, Li Hou, Yinying Lu, Hongfang Liu, Guoqian Jiang
Software Mentions: 2
Published: almost 8 years ago

10.1186/1471-2288-13-95

Empirical study of correlated survival times for recurrent events with proportional hazards margins and the effect of correlation and censoring
Cited by: 15
Author(s): Rodrigo Villegas, Olga Julià, Jordi Ocaña
Software Mentions: 2
Published: over 13 years ago

10.1186/s12889-015-2332-y

Understanding the determinants of under-five child mortality in Uganda including the estimation of unobserved household and community effects using both frequentist and Bayesian survival analysis approaches
Cited by: 31
Author(s): Justine B. Nasejje, Henry Mwambi, Thomas Achia
Software Mentions: 2
Published: about 11 years ago

10.3390/cancers13020268

Improved Prognostic Stratification Using Circulating Tumor Cell Clusters in Patients with Metastatic Castration-Resistant Prostate Cancer
Cited by: 13
Author(s): Chun Wang, Zhenchao Zhang, Weelic Chong, Rui Luo, Ronald E. Myers, Jian Gu, Jianqing Lin, Qiang Wei, Bingshan Li, Timothy R. Rebbeck, Grace L. Lu‐Yao, William Kevin Kelly, Hushan Yang
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12864-017-3494-z

Revealing common disease mechanisms shared by tumors of different tissues of origin through semantic representation of genomic alterations and topic modeling
Cited by: 1
Author(s): Vicky Chen, John Paisley, Xinghua Lu
Software Mentions: 2
Published: over 9 years ago

10.1111/acel.12318

Do altered energy metabolism or spontaneous locomotion ‘mediate’ decelerated senescence?
Cited by: 0
Author(s): Oge Arum, John A. Dawson, Daniel L. Smith, John J. Kopchick, David B. Allison, Andrzej Bartke
Software Mentions: 2
Published: over 11 years ago

10.1186/s12916-020-01603-z

Child maltreatment and cardiovascular disease: quantifying mediation pathways using UK Biobank
Cited by: 23
Author(s): Frederick K. Ho, Carlos Celis‐Morales, Stuart R. Gray, Fanny Petermann-Rocha, Donald M. Lyall, Daniel Mackay, Naveed Sattar, Helen Minnis, Jill P. Pell
Software Mentions: 2
Published: over 6 years ago

10.1093/cid/ciz430

Fecal Immunoglobulin A Against a Sporozoite Antigen at 12 Months Is Associated With Delayed Time to Subsequent Cryptosporidiosis in Urban Bangladesh: A Prospective Cohort Study
Cited by: 7
Author(s): Kevin L. Steiner, Mamun Kabir, Jeffrey W. Priest, Biplob Hossain, Carol A. Gilchrist, Heather Cook, Z. Jennie, Poonum Korpe, Tahmeed Ahmed, A. S. G. Faruque, William A. Petri
Software Mentions: 2
Published: over 7 years ago

10.3390/cancers11111647

Tumor and Cerebrospinal Fluid microRNAs in Primary Central Nervous System Lymphomas
Cited by: 14
Author(s): Michalina Zajdel, Grzegorz Rymkiewicz, Maria Sromek, Maria Cieslikowska, Paweł Swoboda, Mariusz Kulińczak, Krzysztof Goryca, Zbigniew Bystydzieński, Katarzyna Błachnio, Beata Ostrowska, Anita Borysiuk, Agnieszka Druzd‐Sitek, Jan Walewski, Magdalena Chechlińska, Jan Konrad Siwicki
Software Mentions: 2
Published: about 7 years ago

10.1111/acel.13014

Hypothalamic mTORC2 is essential for metabolic health and longevity
Cited by: 42
Author(s): Karthikeyani Chellappa, Jacqueline A. Brinkman, Sarmistha Mukherjee, Mark A. Morrison, Mohammed T. Alotaibi, Kathryn Carbajal, Amber L. Alhadeff, Isaac J. Perron, Rebecca Yao, Cole S. Purdy, Denise M. DeFelice, Matthew H. Wakai, Jay L. Tomasiewicz, Amy Lin, Emma Meyer, Yi Peng, Sebastian I. Arriola Apelo, Luigi Puglielli, J. Nicholas Betley, Georgios K. Paschos, Joseph A. Baur, Dudley W. Lamming
Software Mentions: 2
Published: about 7 years ago

10.3390/cancers13123038

Cav1/EREG/YAP Axis in the Treatment Resistance of Cav1-Expressing Head and Neck Squamous Cell Carcinoma
Cited by: 5
Author(s): Mickaël Burgy, Aude Jehl, Ombline Conrad, Sophie Foppolo, Véronique Bruban, Nelly Étienne-Selloum, Alain C. Jung, Murielle Masson, Christine Macabre, Sonia Ledrappier, Hélène Burckel, Carole Mura, Georges Noël, Christian Borel, François Fasquelle, Mihaela-Alina Onea, Marie‐Pierre Chenard, A. Thiéry, Monique Dontenwill, Sophie Martin
Software Mentions: 2
Published: over 5 years ago

10.1186/cc10114

Acquired bloodstream infection in the intensive care unit: incidence and attributable mortality
Cited by: 134
Author(s): John R. Prowle, Jorge Echeverri, E. Valentina Ligabo, Norelle L Sherry, Gopal Taori, Tim M. Crozier, Graeme K Hart, Tony M. Korman, Barrie C. Mayall, Paul D R Johnson, Rinaldo Bellomo
Software Mentions: 2
Published: almost 16 years ago

10.3390/cancers13112807

Expression of X-Linked Inhibitor of Apoptosis Protein (XIAP) in Breast Cancer Is Associated with Shorter Survival and Resistance to Chemotherapy
Cited by: 17
Author(s): Gayathri R. Devi, Pascal Finetti, Michael A. Morse, Seayoung Lee, Alexandre de Nonneville, Steven Van Laere, Jesse D. Troy, Joseph Geradts, Shannon J. McCall, François Bertucci
Software Mentions: 2
Published: over 5 years ago

10.1186/s12920-020-00812-y

Involvement of NEK2 and its interaction with NDC80 and CEP250 in hepatocellular carcinoma
Cited by: 7
Author(s): Lu Zeng, Xiude Fan, Xiaoyun Wang, Huan Deng, Xiaoge Zhang, Kun Zhang, Shan He, Na Li, Qunying Han, Zhengwen Liu
Software Mentions: 2
Published: almost 6 years ago

10.3390/biology10050422

Survival, Growth, and Reproduction: Comparison of Marbled Crayfish with Four Prominent Crayfish Invaders
Cited by: 12
Author(s): Antonín Kouba, Boris Lipták, Jan Kubec, Martin Bláha, Lukáš Veselý, Phillip J. Haubrock, Francisco J. Oficialdegui, Hamid Niksirat, Jiří Patoka, Miloš Buřič
Software Mentions: 2
Published: over 5 years ago

10.3390/cancers13051175

CD11c-CD8 Spatial Cross Presentation: A Novel Approach to Link Immune Surveillance and Patient Survival in Soft Tissue Sarcoma
Cited by: 2
Author(s): Yanhong Su, Panagiotis Tsagozis, Andri Papakonstantinou, Nicholas P. Tobin, Okan Gultekin, Anna Malmerfelt, Katrine Ingelshed, Shi Yong Neo, Johanna Lundquist, Wiem Chaabane, Maya H. Nisancioglu, Lina Leiss, Arne Östman, Jonas Bergh, Saikiran K. Sedimbi, Kaisa Lehti, Andreas Lundqvist, Christina Linder Stragliotto, Felix Haglund, Monika Ehnman
Software Mentions: 2
Published: over 5 years ago

10.1186/s12916-017-0936-z

A 25-gene classifier predicts overall survival in resectable pancreatic cancer
Cited by: 48
Author(s): David Birnbaum, Pascal Finetti, Alexia Lopresti, Marine Gilabert, Flora Poizat, Jean‐Luc Raoul, Jean‐Robert Delpero, Vincent Moutardier, Daniel Birnbaum, Émilie Mamessier, François Bertucci
Software Mentions: 2
Published: about 9 years ago

10.1093/bioinformatics/btv463

SurvCurv database and online survival analysis platform update
Cited by: 13
Author(s): Matthias Ziehm, Dobril Ivanov, Aditi Bhat, Linda Partridge, Janet M. Thornton
Software Mentions: 2
Published: about 11 years ago

10.1186/1471-2407-14-970

PROGgeneV2: enhancements on the existing database
Cited by: 306
Author(s): Chirayu Goswami, Harikrishna Nakshatri
Software Mentions: 2
Published: almost 12 years ago

10.1186/s12885-015-1423-6

The impact of HER2 phenotype of circulating tumor cells in metastatic breast cancer: a retrospective study in 107 patients
Cited by: 68
Author(s): Markus Wallwiener, Andreas Hartkopf, Sabine Riethdorf, Juliane Nees, Martin R. Sprick, Birgitt Schönfisch, FA Taran, Jörg Heil, Christof Sohn, Klaus Pantel, Andreas Trumpp, Andreas Schneeweiß
Software Mentions: 2
Published: over 11 years ago

10.1186/s40478-014-0074-1

Mutation and expression analysis in medulloblastoma yields prognostic variants and a putative mechanism of disease for i17q tumors
Cited by: 7
Author(s): Gabriel A. Bien-Willner, Robi D. Mitra
Software Mentions: 2
Published: over 12 years ago

10.1002/cam4.1283

Analysis of long‐term survival in multiple myeloma after first‐line autologous stem cell transplantation: impact of clinical risk factors and sustained response
Cited by: 39
Author(s): Nicola Lehners, Natália Becker, Axel Benner, Maria Pritsch, Martin Löpprich, K. Elias, Jens Hillengaß, Hartmut Goldschmidt, Marc-Steffen Raab
Software Mentions: 2
Published: almost 9 years ago

10.1186/1471-2407-11-448

Elevated urinary levels of urokinase-type plasminogen activator receptor (uPAR) in pancreatic ductal adenocarcinoma identify a clinically high-risk group
Cited by: 37
Author(s): Claudio Sorio, Andrea Mafficini, Federico Furlan, Stefano Barbi, Antonio Bonora, Giorgio Brocco, Francesco Blasi, Giorgio Talamini, Claudio Bassi, Aldo Scarpa
Software Mentions: 2
Published: about 15 years ago

10.1002/cam4.806

Blood‐based markers of efficacy and resistance to cetuximab treatment in metastatic colorectal cancer: results from <scp>CALGB</scp> 80203 (Alliance)
Cited by: 16
Author(s): Ace J. Hatch, Alexander B. Sibley, Mark D. Starr, John C. Brady, Chen Jiang, Jingquan Jia, Daniel L Bowers, Herbert Pang, Kouros Owzar, Donna Niedzwiecki, Federico Innocenti, Alan P. Venook, Herbert I. Hurwitz, Andrew B. Nixon
Software Mentions: 2
Published: about 10 years ago

10.1186/s13040-015-0078-9

Iteratively refining breast cancer intrinsic subtypes in the METABRIC dataset
Cited by: 15
Author(s): Heloisa Helena Milioli, Renato Vimieiro, Inna Tishchenko, Carlos Riveros, Regina Berretta, Pablo Moscato
Software Mentions: 2
Published: almost 11 years ago

10.1186/1471-2407-13-568

Impact of radiotherapy in the management of locally advanced extrahepatic cholangiocarcinoma
Cited by: 15
Author(s): Laurence Moureau-Zabotto, Olivıer Turrini, M. Resbeut, Jean‐Luc Raoul, Marc Giovannini, Flora Poizat, Gilles Piana, Jean‐Robert Delpero, François Bertucci
Software Mentions: 2
Published: almost 13 years ago

10.1186/s12935-018-0616-x

Downregulation of hypermethylated in cancer-1 by miR-4532 promotes adriamycin resistance in breast cancer cells
Cited by: 8
Author(s): Fang Fěng, Xiaolan Zhu, Chunyan Wang, Liang Chen, Weijun Cao, Yueqin Liu, Qi Chen, Wenlin Xu
Software Mentions: 2
Published: about 8 years ago

10.3390/cancers11030274

Lactate Activates the E2F Pathway to Promote Cell Motility by Up-Regulating Microtubule Modulating Genes
Cited by: 14
Author(s): Yi Deun Jung, Jung Hee Cho, Seulki Park, Minho Kang, Seung Jin Park, Dong Hee Choi, Moonkyung Jeong, Kyung Chan Park, Young Il Yeom, Dong Chul Lee
Software Mentions: 2
Published: over 7 years ago

10.1186/2049-3002-2-11

GLUT3 is induced during epithelial-mesenchymal transition and promotes tumor cell proliferation in non-small cell lung cancer
Cited by: 110
Author(s): Mark Masin, Jessica Vázquez, Simona Rossi, Svenja Groeneveld, Natasha Samson, Petra Schwalie, Bart Deplancke, Laura E. Frawley, Jérôme Gouttenoire, Darius Moradpour, Trudy G. Oliver, Etienne Meylan
Software Mentions: 2
Published: about 12 years ago

10.1186/s40170-017-0170-3

Molecular features that predict the response to antimetabolite chemotherapies
Cited by: 12
Author(s): Mahya Mehrmohamadi, Seong Ho Jeong, Jason W. Locasale
Software Mentions: 2
Published: about 9 years ago

10.1186/s12898-017-0132-1

Scavenging on a pulsed resource: quality matters for corvids but density for mammals
Cited by: 36
Author(s): Gjermund Gomo, Jenny Mattisson, Bjørn Hagen, Pål Fossland Moa, Tomas Willebrand
Software Mentions: 2
Published: over 9 years ago

10.1186/s12889-015-2426-6

Social activity, cognitive decline and dementia risk: a 20-year prospective cohort study
Cited by: 140
Author(s): Riccardo E. Marioni, Cécile Proust‐Lima, Hélène Amieva, Carol Brayne, Fiona E. Matthews, Jean‐François Dartigues, Hélène Jacqmin‐Gadda
Software Mentions: 2
Published: about 11 years ago

10.1038/s41375-020-0758-4

Outcome of older (≥70 years) APL patients frontline treated with or without arsenic trioxide—an International Collaborative Study
Cited by: 19
Author(s): Sabine Käyser, Ramy Rahmé, David Martínez‐Cuadrón, Gabriel Ghiaur, Xavier Thomas, Marta Sobas, Agnès Guerci‐Bresler, Ana Garrido, Arnaud Pigneux, Cristina Gil, Emmanuel Raffoux, Mar Tormo, Norbert Vey, Javier de la Serna, Olga Salamero, Eva Lengfelder, Mark J. Levis, Pierre Fenaux, Miguel Á. Sanz, Uwe Platzbecker, Richard F. Schlenk, Lionel Adès, Pau Montesinos
Software Mentions: 2
Published: over 6 years ago

10.1186/s12862-019-1513-1

Asian elephants exhibit post-reproductive lifespans
Cited by: 16
Author(s): Simon N. Chapman, John A Jackson, Win Htut, Virpi Lummaa, Mirkka Lahdenperä
Software Mentions: 2
Published: about 7 years ago

10.1186/s12862-017-1026-8

Group demography affects ant colony performance and individual speed of queen and worker aging
Cited by: 12
Author(s): Julia Giehr, Jürgen Heınze, Alexandra Schrempf
Software Mentions: 2
Published: about 9 years ago

10.1186/s12885-017-3955-4

Sidedness and TP53 mutations impact OS in anti-EGFR but not anti-VEGF treated mCRC - an analysis of the KRAS registry of the AGMT (Arbeitsgemeinschaft Medikamentöse Tumortherapie)
Cited by: 11
Author(s): Florian Huemer, Josef Thaler, Gudrun Piringer, Hubert Hackl, Lisa Pleyer, Clemens Hufnagl, Lukas Weiß, Richard Greil
Software Mentions: 2
Published: almost 9 years ago

10.1186/s12885-016-2594-5

Health services research of integrative oncology in palliative care of patients with advanced pancreatic cancer
Cited by: 28
Author(s): Jan Axtner, Megan L. Steele, Matthias Kretzler, Günther Spahn, Harald Matthes, Friedemann Schad
Software Mentions: 2
Published: about 10 years ago

10.1038/s41375-020-0917-7

Therapy-related myelodysplastic syndromes deserve specific diagnostic sub-classification and risk-stratification—an approach to classification of patients with t-MDS
Cited by: 48
Author(s): Andrea Kuendgen, Meritxell Nomdedéu, Heinz Tuechler, Guillermo Garcia‐Manero, Rami Komrokji, Mikkael A. Sekeres, Matteo Giovanni Della Porta, Mario Cazzola, Amy E. DeZern, Gail J. Roboz, David P. Steensma, Arjan A. van de Loosdrecht, Richard F. Schlenk, Javier Grau, Xavier Calvo, Sabine Blum, Arturo Pereira, Peter Valent, Dolors Costa, Aristoteles Giagounidis, Blanca Xicoy, Hartmut Döhner, Uwe Platzbecker, Carme Pedro, Michael Lübbert, Itziar Oiartzabal, María Díez-Campelo, María-Teresa Cedena, Sigrid Machherndl‐Spandl, Maria López-Pavía, Claudia D. Baldus, Montserra Martinez-de-Sola, Reinhard Stauder, Brayan Merchán, Alan F. List, Christina Ganster, Thomas Schroeder, Maria Teresa Voso, Michael Pfeilstöcker, Heinz Sill, Barbara Hildebrandt, Jordi Esteve, Benet Nomdedeu, Francesc Cobo, Rainer Haas, Françesc Solé, Ulrich Germing, Peter L. Greenberg, Detlef Haase, Guillermo Sanz
Software Mentions: 2
Published: over 6 years ago

10.1038/s41375-020-01025-z

SLAMF receptors negatively regulate B cell receptor signaling in chronic lymphocytic leukemia via recruitment of prohibitin-2
Cited by: 14
Author(s): Lisa von Wenserski, Christoph Schultheiß, Sarah Naomi Bolz, Simon Schliffke, Donjetë Simnica, Edith Willscher, Helwe Gerull, Gerrit Wolters‐Eisfeld, Kristoffer Riecken, Boris Fehse, Marcus Altfeld, Peter Nollau, Mascha Binder
Software Mentions: 2
Published: about 6 years ago

10.3390/cancers12030689

Cancer-testis Antigen FATE1 Expression in Adrenocortical Tumors Is Associated with A Pervasive Autoimmune Response and Is A Marker of Malignancy in Adult, but Not Children, ACC
Cited by: 15
Author(s): Mabrouka Doghman, Pascal Finetti, Nelly Durand, Ivy Zortéa S Parise, Silviu Sbiera, Giulia Cantini, Letizia Canu, Ségolène Hescot, Mirna M O Figueiredo, Heloísa Komechen, Iuliu Sbiera, Gabriella Nesi, Angélo Paci, Abir Al Ghuzlan, Daniel Birnbaum, Éric Baudin, Michaela Luconi, Martin Fassnacht, Bonald C. Figueiredo, François Bertucci, Enzo Lalli
Software Mentions: 2
Published: over 6 years ago

10.1186/s12936-015-0883-0

Treatment of livestock with systemic insecticides for control of Anopheles arabiensis in western Kenya
Cited by: 60
Author(s): Richard M. Poché, Dylan Burruss, L. V. Polyakova, David M. Poché, Rajesh Garlapati
Software Mentions: 2
Published: about 11 years ago

10.1186/s12936-018-2258-9

Antibody levels to recombinant VAR2CSA domains vary with Plasmodium falciparum parasitaemia, gestational age, and gravidity, but do not predict pregnancy outcomes
Cited by: 22
Author(s): Michal Fried, Jonathan D. Kurtis, Bruce J. Swihart, Robert Morrison, Sunthorn Pond-Tor, Amadou Barry, Yoro Sidibé, S. Keïta, Almahamoudou Mahamar, Naissem Andemel, Oumar Attaher, Adama Dembélé, Kadidia B. Cisse, Bacary S Diarra, Moussa B. Kanoute, David L. Narum, Alassane Dicko, Patrick E. Duffy
Software Mentions: 2
Published: over 8 years ago

10.1186/s12864-019-6192-1

Cox regression increases power to detect genotype-phenotype associations in genomic studies using the electronic health record
Cited by: 20
Author(s): Jacob J. Hughey, Seth D. Rhoades, Darwin Y. Fu, Lisa Bastarache, Joshua C. Denny, Qingxia Chen
Software Mentions: 2
Published: almost 7 years ago

10.1097/MD.0000000000024866

Novel oxidative stress-related prognostic biomarkers for melanoma associated with tumor metastasis
Cited by: 6
Author(s): Xianpei Wu, Jinmin Zhao
Software Mentions: 2
Published: over 5 years ago

10.18632/aging.203173

Deoxyribonuclease 1-like 3 may be a potential prognostic biomarker associated with immune infiltration in colon cancer
Cited by: 11
Author(s): Jing Liu, Jingya Yi, Zhihong Zhang, Deliang Cao, Lei Li, Yachao Yao
Software Mentions: 2
Published: over 5 years ago

10.1186/s12885-021-07914-5

Prognostic value of the micronucleus assay for clinical endpoints in neoadjuvant radiochemotherapy for rectal cancer
Cited by: 4
Author(s): Leif Hendrik Dröge, Steffen Hennies, Stephan Lorenzen, Lena‐Christin Conradi, Henriette Quack, Torsten Liersch, Christian Helms, Miriam Alice Frank, Markus Schirmer, Margret Rave-Fränk, Tim Beißbarth, Hendrik A. Wolff
Software Mentions: 2
Published: over 5 years ago

10.1186/1476-4598-13-228

Claudin-low breast cancers: clinical, pathological, molecular and prognostic characterization
Cited by: 100
Author(s): Renaud Sabatier, Pascal Finetti, Arnaud Guillé, José Adélaı̈de, Max Chaffanet, Patrice Viens, Daniel Birnbaum, François Bertucci
Software Mentions: 2
Published: about 12 years ago

10.1186/1476-4598-10-86

Kinome expression profiling and prognosis of basal breast cancers
Cited by: 46
Author(s): Renaud Sabatier, Pascal Finetti, Émilie Mamessier, Stéphane Raynaud, Nathalie Cervera, Éric Lambaudie, Jocelyne Jacquemier, Patrice Viens, Daniel Birnbaum, François Bertucci
Software Mentions: 2
Published: over 15 years ago

10.1186/s12943-017-0732-6

Reprogramming of stromal fibroblasts by SNAI2 contributes to tumor desmoplasia and ovarian cancer progression
Cited by: 43
Author(s): Zongyuan Yang, Xin Yang, Sen Xu, Jin Park, Xiaoting Li, Xiao Wu, Dan Liú, Kecheng Huang, Sixiang Long, Ya Wang, Chaoyang Sun, Gang Chen, Junbo Hu, Meng Li, Ding Ma, Qinglei Gao
Software Mentions: 2
Published: about 9 years ago

10.1186/s12916-015-0484-3

Reproductive factors and risk of mortality in the European Prospective Investigation into Cancer and Nutrition; a cohort study
Cited by: 53
Author(s): Melissa A. Merritt, Elio Riboli, Neil Murphy, Mai Kadi, Anne Tjønneland, Anja Olsen, Kim Overvad, Laure Dossus, Laureen Dartois, Françoise Clavel‐Chapelon, Renée T. Fortner, Verena Katzke, Heiner Boeing, Antonia Trichopoulou, Παγώνα Λάγιου, Dimitrios Trichopoulos, Domenico Palli, Sabina Sieri, Rosario Tumino, Carlotta Sacerdote, Salvatore Panico, H. Bas Bueno-de-Mesquita, Petra H.M. Peeters, Eiliv Lund, Aurélie Nakamura, Elisabete Weiderpass, J. Ramón Quiŕos, Antonio Agudo, Esther Molina‐Montes, Nerea Larrañaga, Miren Dorronsoro, Lluís Cirera, Aurelio Barricarte, Åsa Olsson, Salma Butt, Annika Idahl, Eva Lundin, Nicholas J. Wareham, Timothy J. Key, Paul Brennan, Pietro Ferrari, Petra A. Wark, Teresa Norat, Amanda J. Cross, Marc J. Gunter
Software Mentions: 2
Published: almost 11 years ago

10.1186/1471-2164-10-137

A signature-based method for indexing cell cycle phase distribution from microarray profiles
Cited by: 30
Author(s): Hideaki Mizuno, Yoshito Nakanishi, Nobuya Ishii, Akinori Sarai, Koji Kitada
Software Mentions: 2
Published: almost 18 years ago

10.1007/s10565-016-9322-4

Disease-specific dynamic biomarkers selected by integrating inflammatory mediators with clinical informatics in ARDS patients with severe pneumonia
Cited by: 67
Author(s): Chengshui Chen, Lin Shi, Yuping Li, Xiangdong Wang, Shuanying Yang
Software Mentions: 2
Published: over 10 years ago

10.1186/s12885-020-07482-0

The prognostic significance of inflammation-based scores in patients with ampullary carcinoma after pancreaticoduodenectomy
Cited by: 5
Author(s): Shuxin Sun, Chaobin He, Jun Wang, Xin Huang, Jiali Wu, Shengping Li
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0016675

Effects of an Infectious Fungus, Batrachochytrium dendrobatidis, on Amphibian Predator-Prey Interactions
Cited by: 19
Author(s): Barbara A. Han, Catherine Searle, Andrew R. Blaustein
Software Mentions: 2
Published: over 15 years ago

10.1038/s41598-020-77321-6

Railway mortality for several mammal species increases with train speed, proximity to water, and track curvature
Cited by: 11
Author(s): Colleen Cassady St. Clair, Jesse Whittington, Anne Forshner, Aditya Gangadharan, David Laskin
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0113574

Association of GWAS-Identified Lung Cancer Susceptibility Loci with Survival Length in Patients with Small-Cell Lung Cancer Treated with Platinum-Based Chemotherapy
Cited by: 9
Author(s): Dong Li, Lixuan Wei, Binghe Xu, Dianke Yu, Jiang Chang, Peng Yuan, Zhongli Du, Wen Tan, Hongbing Shen, Tangchun Wu, Chen Wu, Dongxin Lin
Software Mentions: 2
Published: almost 12 years ago

10.3791/57676

Oral Bacterial Infection and Shedding in <em>Drosophila melanogaster</em>
Cited by: 17
Author(s): Jonathon A. Siva-Jothy, Arun Prakash, Radhakrishnan B. Vasanthakrishnan, Katy M. Monteith, Pedro F. Vale
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0203600

Hospital-acquired colonization and infections in a Vietnamese intensive care unit
Cited by: 20
Author(s): Duong Bich Thuy, James Campbell, Le Thanh Hoang Nhat, Nguyễn Văn Minh Hoàng, Nguyễn Văn Hảo, Stephen Baker, Ronald B. Geskus, Guy Thwaites, Nguyễn Văn Vĩnh Châu, C. Louise Thwaites
Software Mentions: 2
Published: about 8 years ago

10.1038/s41598-020-65290-9

Mortality of a large wide-ranging mammal largely caused by anthropogenic activities
Cited by: 14
Author(s): Mariela G. Gantchoff, J. E. Hill, Kenneth F. Kellner, Nicholas L. Fowler, Tyler R. Petroelje, Laura Conlee, Dean E. Beyer, Jerrold L. Belant
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0078771

Nest Sanitation as the Evolutionary Background for Egg Ejection Behaviour and the Role of Motivation for Object Removal
Cited by: 26
Author(s): Miroslav Poláček, Matteo Griggio, Michaela Bartíková, Herbert Hoi
Software Mentions: 2
Published: almost 13 years ago

10.1155/2021/5524685

Real-World Survival in Patients with Metastatic Melanoma after Discontinuation of Anti-PD-1 Immunotherapy for Objective Response or Adverse Effects: A Retrospective Study
Cited by: 11
Author(s): Julie Valentin, Thomas Ferté, Valérie Dorizy-Vuong, L. Dousset, S. Prey, Caroline Dutriaux, Anne Pham‐Ledard, M. Beylot‐Barry, E. Gérard
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-019-54844-1

Frequentist and Bayesian approaches for food allergen risk assessment: risk outcome and uncertainty comparisons
Cited by: 2
Author(s): Sophie Birot, Amélie Crépet, Benjamin C. Remington, Charlotte Bernhard Madsen, Astrid G. Kruizinga, Joseph L. Baumert, Per B. Brockhoff
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0037943

8q24 Cancer Risk Allele Associated with Major Metastatic Risk in Inflammatory Breast Cancer
Cited by: 36
Author(s): François Bertucci, Arnaud Lagarde, Anthony Ferrari, Pascal Finetti, Emmanuelle Charafe-Jauffret, Steven Van Laere, José Adélaı̈de, Patrice Viens, Gilles Thomas, Daniel Birnbaum, Sylviane Olschwang
Software Mentions: 2
Published: over 14 years ago

10.1038/s41598-019-48947-y

Time of Day and its Association with Risk of Death and Chance of Discharge in Critically Ill Patients: A Retrospective Study
Cited by: 5
Author(s): Paul Zajic, Péter Bauer, Andrew Rhodes, Rui P. Moreno, Tobias Fellinger, Barbara Metnitz, Martin Posch, Philipp Metnitz
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pone.0169779

Robust Inference from Conditional Logistic Regression Applied to Movement and Habitat Selection Analysis
Cited by: 37
Author(s): Marie‐Caroline Prima, Thierry Duchesne, Daniel Fortin
Software Mentions: 2
Published: almost 10 years ago

10.3389/fonc.2020.01673

Prognostic Nomogram for Childhood Acute Lymphoblastic Leukemia: A Comprehensive Analysis of 673 Patients
Cited by: 9
Author(s): Rui Mao, Shaoxuan Hu, Yuanchuan Zhang, Feng Du, Yu Zhang, Yanjun Liu, Tongtong Zhang
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-019-41550-1

Cancer risk in relation to body fat distribution, evaluated by DXA-scans, in postmenopausal women – the Prospective Epidemiological Risk Factor (PERF) study
Cited by: 10
Author(s): Line Mærsk Staunstrup, Henning Bay Nielsen, Bente Klarlund Pedersen, Morten A. Karsdal, Joseph Blair, Jesper Christensen, Cecilie L. Bager
Software Mentions: 2
Published: over 7 years ago

10.18632/oncotarget.8220

Genomic and epigenomic analysis of high-risk prostate cancer reveals changes in hydroxymethylation and TET1
Cited by: 31
Author(s): Lien Spans, Thomas Van den Broeck, Elien Smeets, Stefan Prekovic, Bernard Thienpont, Diether Lambrechts, R. Jeffrey Karnes, Nicholas Erho, Mohammed Alshalalfa, Elai Davicioni, Christine Helsen, Thomas Gevaert, Lorenzo Tosco, Karin Haustermans, Evelyne Lerut, Steven Joniau, Frank Claessens
Software Mentions: 2
Published: over 10 years ago

10.1038/s41598-018-34820-x

Probing tumor microenvironment in patients with newly diagnosed glioblastoma during chemoradiation and adjuvant temozolomide with functional MRI
Cited by: 10
Author(s): Ina Ly, Bella Vakulenko‐Lagun, Kyrre E. Emblem, Yangming Ou, Da Xiao, Rebecca A. Betensky, Jayashree Kalpathy–Cramer, Dan G. Duda, Rakesh K. Jain, S. Andrew, Scott R. Plotkin, Tracy T. Batchelor, Glorian Sorensen, Bruce R. Rosen, Elizabeth R. Gerstner
Software Mentions: 2
Published: almost 8 years ago

10.18632/oncotarget.8726

MARCKS contributes to stromal cancer-associated fibroblast activation and facilitates ovarian cancer metastasis
Cited by: 29
Author(s): Zongyuan Yang, Sen Xu, Jin Park, Xin Yang, Xiaoting Li, Dongyi Wan, Taoran Zhang, Sixiang Long, Xiao Wu, Gang Chen, Meng Li, Dan Liú, Yong Fang, Pingbo Chen, Ding Ma, Qinglei Gao
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0228865

Should I stay or should I go? Determinants of immediate and delayed movement responses of female red deer (Cervus elaphus) to drive hunts
Cited by: 8
Author(s): Agathe Chassagneux, C. Calenge, Pascal Marchand, Emmanuelle Richard, Etienne Guillaumat, Éric Baubet, Sonia Saïd
Software Mentions: 2
Published: over 6 years ago

Projects: cran: survival

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Science Score: 100/100

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Papers Mentioning survival 1,690