Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: spaMM

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/spaMM

Mixed-Effect Models, with or without Spatial Random Effects
56 versions
Latest release: about 1 year ago
5 dependent packages
2,645 downloads last month

Papers Mentioning spaMM 23

Pollen defenses negatively impact foraging and fitness in a generalist bee (Bombus impatiens: Apidae)
Cited by: 34
Author(s): Kristen Brochu, Maria T. van Dyke, Nelson J. Milano, Jessica D. Petersen, Scott H. McArt, Brian A. Nault, André Kessler, Bryan N. Danforth
Software Mentions: 17
Published: over 4 years ago

10.1371/journal.pone.0206077

Demographic characteristics of an avian predator, Louisiana Waterthrush (Parkesia motacilla), in response to its aquatic prey in a Central Appalachian USA watershed impacted by shale gas development
Cited by: 6
Author(s): Mack W. Frantz, Petra Bohall Wood, George T. Merovich
Software Mentions: 8
Published: almost 6 years ago

10.7717/peerj.4794

A brief introduction to mixed effects modelling and multi-model inference in ecology
Cited by: 1,148
Author(s): Xavier A. Harrison, Lynda Donaldson, M. Correa-Cano, Julian C. Evans, David N. Fisher, Cecily E. D. Goodwin, Beth S. Robinson, David J. Hodgson, Richard Inger
Software Mentions: 6
Published: over 6 years ago

10.3390/ani9070455

Music Festival Makes Hedgehogs Move: How Individuals Cope Behaviorally in Response to Human-Induced Stressors
Cited by: 13
Author(s): Wanja Rast, Leon M. F. Barthel, Anne Berger
Software Mentions: 6
Published: about 5 years ago

10.3389/fpls.2021.681962

Why More Leaflets? The Role of Natural Selection in Shaping the Spatial Pattern of Leaf-Shape Variation in Oxytropis diversifolia (Fabaceae) and Two Close Relatives
Cited by: 4
Author(s): Hui Wang, Peiliang Liu, Jian Li, Han Yang, Qin Li, Zhao‐Yang Chang
Software Mentions: 5
Published: about 3 years ago

10.1038/s41598-020-67666-3

Finding hotspots: development of an adaptive spatial sampling approach
Cited by: 18
Author(s): Ricardo Andrade‐Pacheco, Francois Rerolle, Jean Frantz Lemoine, Leda Hernandez, Aboulaye Meïté, Lazarus Juziwelo, Aurélien F. Bibaut, Mark J. van der Laan, Benjamin F. Arnold, Hugh J. W. Sturrock
Software Mentions: 4
Published: about 4 years ago

10.1002/ece3.5531

Pollinator specialization increases with a decrease in a mass‐flowering plant in networks inferred from DNA metabarcoding
Cited by: 16
Author(s): André Pornon, Sandra Baksay, Nathalie Escaravage, Monique Burrus, Christophe Andalo
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pgen.1006616

Investigating the case of human nose shape and climate adaptation
Cited by: 69
Author(s): Arslan Zaidi, Brooke C. Mattern, Peter Claes, Brian McEcoy, Cris E. Hughes, Mark D. Shriver
Software Mentions: 3
Published: over 7 years ago

10.1098/rsos.201356

Phantom of the forest or successful citizen? Analysing how Northern Goshawks ( <i>Accipiter gentilis</i> ) cope with the urban environment
Cited by: 6
Author(s): Manuela Merling de Chapa, Alexandre Courtiol, Marc Engler, Lisa Giese, Christian Rutz, Michael Lakermann, Gerard Müskens, Youri van der Horst, Ronald Zollinger, H Wirth, Norbert Kenntner, Oliver Krüger, Nayden Chakarov, Anna Katharina Müller, Volkher Looft, Thomas Grünkorn, André Hallau, Rainer Altenkamp, Oliver Krone
Software Mentions: 2
Published: almost 4 years ago

10.1038/srep27282

Using metabarcoding to reveal and quantify plant-pollinator interactions
Cited by: 107
Author(s): André Pornon, Nathalie Escaravage, Monique Burrus, Hélène Holota, Aurélie Khimoun, Jérôme Mariette, Charlène Pellizzari, Amaia Iribar, Rampal S. Etienne, Pierre Taberlet, Marie Vidal, Peter Winterton, Lucie Zinger, Christophe Andalo
Software Mentions: 2
Published: over 8 years ago

10.1038/s41598-020-65459-2

Urban aliens and threatened near-naturals: Land-cover affects the species richness of alien- and threatened species in an urban-rural setting
Cited by: 3
Author(s): Tanja K. Petersen, James D. M. Speed, Vidar Grøtan, Gunnar Austrheim
Software Mentions: 2
Published: over 4 years ago

10.1038/s41598-020-77519-8

Supporting elimination of lymphatic filariasis in Samoa by predicting locations of residual infection using machine learning and geostatistics
Cited by: 6
Author(s): Helen J. Mayfield, Hugh J. W. Sturrock, Benjamin F. Arnold, Ricardo Andrade‐Pacheco, Thérèse Kearns, Patricia M. Graves, Take Naseri, Robert Thomsen, Katherine Gass, Colleen L. Lau
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pbio.2002731

Spontaneous mutation rate is a plastic trait associated with population density across domains of life
Cited by: 55
Author(s): Rok Krašovec, Huw Richards, Danna R. Gifford, Charlie Hatcher, Katy J. Faulkner, Roman V. Belavkin, Alastair Channon, Elizabeth Aston, Andrew J. McBain, Christopher G. Knight
Software Mentions: 2
Published: about 7 years ago

10.1007/s00436-021-07299-1

To get sick or not to get sick—Trichomonas infections in two Accipiter species from Germany
Cited by: 1
Author(s): Manuela Merling de Chapa, Susanne Auls, Norbert Kenntner, Oliver Krone
Software Mentions: 2
Published: about 3 years ago

10.7717/peerj.1114

A comparison of observation-level random effect and Beta-Binomial models for modelling overdispersion in Binomial data in ecology & evolution
Cited by: 267
Author(s): Xavier A. Harrison
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0121755

Behavioral Cost & Overdominance in Anopheles gambiae
Cited by: 19
Author(s): Malal Mamadou Diop, Nicolas Moiroux, Fabrice Chandre, Hadrien Martin-Herrou, Pascal Milesi, Olayidé Boussari, Angélique Porciani, Stéphane Duchon, Pierrick Labbé, Cédric Pennetier
Software Mentions: 2
Published: over 9 years ago

10.1002/ece3.6970

Fine‐scale variation within urban landscapes affects marking patterns and gastrointestinal parasite diversity in red foxes
Cited by: 6
Author(s): Lisa V. Gecchele, Amy B. Pedersen, Matthew B.V. Bell
Software Mentions: 2
Published: almost 4 years ago

10.3390/ijerph18189643

Analyzing Spatial Dependency of the 2016–2017 Korean HPAI Outbreak to Determine the Effective Culling Radius
Cited by: 0
Author(s): Kwideok Han, Meilan An, Inbae Ji
Software Mentions: 1
Published: about 3 years ago

10.1186/s12898-018-0215-7

Coping with change in predation risk across space and time through complementary behavioral responses
Cited by: 5
Author(s): Pierrick Blanchard, Christine Lauzeral, Simon Chamaillé‐Jammes, Clément Brunet, Arnaud Lec’hvien, Guillaume Péron, Dominique Pontier
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0126341

The Non-Proliferative Nature of Ascidian Folliculogenesis as a Model of Highly Ordered Cellular Topology Distinct from Proliferative Epithelia
Cited by: 5
Author(s): Karim Azzag, Yoann Chélin, François Rousset, Emilie Le Goff, Camille Martinand‐Mari, Anne‐Marie Martinez, Bernard Maurin, Martine Daujat-Chavanieu, Nelly Godefroy, Julien Averseng, Paul Mangeat, Stephen Baghdiguian
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0212655

Role of the Photorhabdus Dam methyltransferase during interactions with its invertebrate hosts
Cited by: 3
Author(s): Amaury Payelleville, Dana Blackburn, Anne Lanois, Sylvie Pagès, Marine Cambon, Nadège Ginibre, David J. Clarke, Alain Givaudan, Julien Brillard
Software Mentions: 1
Published: almost 5 years ago

10.1002/ece3.2718

The shifting phenological landscape: Within- and between-species variation in leaf emergence in a mixed-deciduous woodland
Cited by: 49
Author(s): Ella F. Cole, Ben C. Sheldon
Software Mentions: 1
Published: over 7 years ago

10.1128/mBio.01399-20

Step-Specific Adaptation and Trade-Off over the Course of an Infection by GASP Mutation Small Colony Variants
Cited by: 5
Author(s): Christian Faucher, Vincent Mazana, Marion Kardacz, Nathalie Parthuisot, Jean‐Baptiste Ferdy, David Duneau
Software Mentions: 1
Published: over 3 years ago